Personal tools

FFCP PHASE1:Mm9::chr11:76384845..76384866,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
(5 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=109934
|EntrezGene=109934
|HGNC=
|HGNC=
|MCL_coexpression_id=1
|TSSclassifier=NA
|UniProt=E9PUE7
|UniProt=E9PUE7
|association_with_transcript=0bp_to_ENSMUST00000108407_5end
|association_with_transcript=0bp_to_ENSMUST00000108407_5end
|cluster_id=chr11:76384845..76384866,-
|description=CAGE_peak_4_at_Abr_5end
|description=CAGE_peak_4_at_Abr_5end
|id=chr11:76384845..76384866,-
|id=chr11:76384845..76384866,-
|ontology_enrichment_celltype=CL:0000117!1.88e-11!23;CL:0000337!1.88e-11!23;CL:0000540!9.53e-07!33;CL:0000047!9.53e-07!33;CL:0000031!9.53e-07!33;CL:0000404!9.53e-07!33
|ontology_enrichment_celltype=CL:0000117!1.88e-11!23;CL:0000337!1.88e-11!23;CL:0000540!9.53e-07!33;CL:0000047!9.53e-07!33;CL:0000031!9.53e-07!33;CL:0000404!9.53e-07!33
|ontology_enrichment_celltype_v019_2=CL:0000117,2.78e-13,23;CL:0000337,2.78e-13,23;CL:0000540,6.98e-07,33;CL:0000047,6.98e-07,33;CL:0000031,6.98e-07,33;CL:0000404,6.98e-07,33
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002346!1.50e-23!71;UBERON:0003075!1.50e-23!71;UBERON:0007284!1.50e-23!71;UBERON:0001049!4.71e-21!52;UBERON:0005068!4.71e-21!52;UBERON:0006241!4.71e-21!52;UBERON:0007135!4.71e-21!52;UBERON:0000073!6.28e-21!75;UBERON:0001016!6.28e-21!75;UBERON:0001017!6.48e-21!73;UBERON:0005743!6.48e-21!73;UBERON:0004121!3.50e-20!102;UBERON:0000924!3.50e-20!102;UBERON:0006601!3.50e-20!102;UBERON:0000033!3.62e-20!63;UBERON:0000955!3.95e-20!50;UBERON:0006238!3.95e-20!50;UBERON:0002616!1.81e-19!49;UBERON:0003056!7.27e-19!49;UBERON:0003080!1.87e-16!40;UBERON:0002780!8.50e-16!39;UBERON:0001890!8.50e-16!39;UBERON:0006240!8.50e-16!39;UBERON:0002020!1.43e-15!34;UBERON:0002791!8.71e-13!29;UBERON:0003528!8.71e-13!29;UBERON:0001893!8.71e-13!29;UBERON:0000153!5.89e-10!94;UBERON:0007811!5.39e-09!86;UBERON:0000956!1.11e-08!21;UBERON:0001869!1.11e-08!21;UBERON:0000203!1.11e-08!21;UBERON:0000489!1.31e-08!21;UBERON:0002021!2.12e-08!10;UBERON:0000411!2.12e-08!10;UBERON:0001950!2.12e-08!10;UBERON:0002619!1.47e-07!17
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.32e-26,54;UBERON:0002346,1.65e-25,64;UBERON:0003075,1.65e-25,64;UBERON:0007284,1.65e-25,64;UBERON:0001049,6.22e-25,52;UBERON:0005068,6.22e-25,52;UBERON:0006241,6.22e-25,52;UBERON:0007135,6.22e-25,52;UBERON:0001017,1.42e-23,73;UBERON:0001016,3.68e-23,75;UBERON:0003056,1.15e-22,49;UBERON:0000955,1.60e-21,47;UBERON:0006238,1.60e-21,47;UBERON:0002616,9.36e-21,46;UBERON:0004121,4.35e-20,95;UBERON:0000924,4.35e-20,95;UBERON:0006601,4.35e-20,95;UBERON:0003080,8.14e-20,40;UBERON:0010371,2.89e-19,73;UBERON:0002780,4.97e-19,39;UBERON:0001890,4.97e-19,39;UBERON:0006240,4.97e-19,39;UBERON:0002020,8.54e-19,34;UBERON:0003528,1.80e-15,29;UBERON:0002791,1.80e-15,29;UBERON:0001893,1.80e-15,29;UBERON:0010314,1.54e-14,92;UBERON:0000956,1.43e-10,21;UBERON:0001869,1.43e-10,21;UBERON:0000203,1.43e-10,21;UBERON:0002021,1.14e-09,10;UBERON:0000411,1.14e-09,10;UBERON:0001950,1.14e-09,10;UBERON:0000489,1.16e-09,21;UBERON:0002619,2.98e-09,17;UBERON:0002113,7.12e-07,14;UBERON:0003918,7.12e-07,14;UBERON:0011143,7.12e-07,14;UBERON:0005095,7.12e-07,14;UBERON:0007687,7.12e-07,14
|phase1_expression=0.960893082628764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.3577272795174,0.0992909512008853,0.261199789138935,0.159992422793407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101376931219515,0,0,0.872100625521786,0,0,1.39986421625363,1.43752564364972,0,0,0,0,0.286533439938757,0,9.5088736604011,8.99284664762456,12.0427966666174,0.677689064138264,0,1.3498495759221,2.96659908770092,2.8419204597844,2.09720077362883,3.07374644257244,1.8664130215526,2.43010688997043,2.3135745748652,20.2812198926701,16.3442720304194,2.44981598429908,2.01275489138296,2.75765635983006,17.6185409599022,26.8143409978894,26.4203237200739,6.72620067423989,5.39777097254217,8.85552729946492,18.9844439320939,20.8222165711722,20.3221669543157,15.0260578591571,17.3693450574906,8.01517617048792,0.605809546665472,2.11600368298999,0.869593466105033,0,0,0,0,0,1.68533304158102,0,0,0,0.14084341977668,0,0,0,0,0.253359865475099,0,0.91347103775248,0.258937883647172,10.3909497345377,1.21439728736295,1.52232739156071,1.15307748628029,1.65794904607885,1.52865319276416,2.13633205260448,0,0,0,0.647067399789637,0.441683036920787,0.969750506270444,0,9.9545470983926,11.7290155815535,0.510914110417183,0,0,0,27.861058929297,24.7050325522058,3.26701315493447,38.7628234028777,35.8001640262463,24.103413168909,25.9586020908412,2.74966282395854,4.10543003013307,17.1851475734899,1.89397670297827,2.34216797332867,2.29902104433473,1.80062129805349,2.41127708537144,3.6739709541717,3.84341160854549,1.96773621575431,8.2785078636485,4.52692785158969,3.9712276835242,2.99116911078713,1.31517439456545,2.22437799380478,0.348252166522167,0.61734640922383,2.38841120182192,0,0,0,0.207125772535502,0.703578179943289,0.180062061461015,0.23674473558521,0,0,0,0,0.116765342367169,0,0,0,0,0,0,31.5434922846191,6.79170441703277,0,0,3.19932375802851,1.16118335930219,1.03093969057675,0.605050573870028,0.22237804384487,0.190225626112559,0,0,0,0.198956472041151,0.19496408711912,0,0,0.199141273254367,5.12103332573321,2.74196430263349,4.50830942692322,3.25842124552503,3.87904974335251,2.52488951605147,1.64414996523069,4.72352473534727,2.82597710114475,2.59134044235781,0,0.166845105716094,0,0,0,0,0.25462585178142,0,0.324270453550071,0,0,0.372140947668503,0,0.252578877947112,0,0,0,1.89491411770485,0.488894929326078,1.01847051465113,0.234690248288502,0.167506257441816,0,0.195133647857799,0.157635144106191,0,0,0.163863314715738,0,0,1.50791283939272,9.79030230873677,0,0,20.068823748474,19.2227166011213,0,0,0.315508219416257,0.390438744296638,0.646270193198397,0,0,1.13230612315533,0.404810701674894,0,0,25.7057053137446,0.709700426041343,1.95872164033981,0.81443479676788,3.79431282836832,1.32745138339963,2.42780636154981,1.209294227859,1.32023555829129,1.47650946440386,0.922305443831782,1.80899805217755,0.727067458955011,0.356497378384721,0,0,0,3.40439605753788,1.98067203434441,2.58717367565509,1.92903331528433,1.77340233642274,1.96205699362278,3.29098041204242,2.74018454203139,0.469343416127421,0,1.7642271844397,0.16488625294148,0.968786560175433,0.784068024066026,0.358117032009409,0.656563598980245,0,12.0526446306831,0.170870880797853,0.206386867963223,0.185194527369712,0,0.136694227721025,0,0.169978429993855,0.139951452323658,0.138199973804424,0,3.00519193902079,0.609958401380546,0.86404272657441,0.418176592028937,0.655087691238533,0.269728692769641,0.661227645802687,0.523511883968059,0.129614973291793,0,2.25477175473676,2.24274819065968,0.992750942742586,0.972255941720238,0.387479470433193,1.35164900392623,1.5256441023948,1.8228613878153,1.15345278868282,0.966336483304024,1.72818003754719,0,2.43270258348197,1.43795340030758,0.25984164595559,0.179026695667481,0,0,0,0.100966449948148,0.15241361331,0,0.0974578807397524,0,0,0,1.55390167361845,0.538283139656854,0.671538465456314,0.19318959403219,0.93841237725591,3.29672923681077,0.643105137237198,2.50786052017682,52.5219213633872,50.1754507792823,53.2792827498639,59.2893479085722,39.7347861466973,33.9927253825365,43.8764625150674,38.727623477283,30.8136838109259,34.1721805756201,2.49089634202024,3.99024873401031,2.39027048055788,2.18796045361465,2.30574478890781,1.65459157605013,1.55572709461131,1.44224540067226,0.64183841918363,2.52697211763797,3.54871019846336,2.26351609663291,0.936415074698824,1.72867911493147,1.26358031702349,0.952587382566147,1.27472758539341,1.15745532278223,0.412085900803307,2.20798380201596,1.37147700954166,1.59728225543404,1.1921809497366,2.47088908274958,2.07040636913727,1.86152137361688,2.0122077016005,2.36762740294059,1.7654534799962,3.92799590160417,1.30498519936592,1.37906275325789,2.45538625901814,2.32405261778949,1.73615949883027,2.99772693525535,0.935726433781634,2.57845264857958,2.29545998482612,0.661774257358546,0.231867835620421
|phase1_expression=0.960893082628764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.3577272795174,0.0992909512008853,0.261199789138935,0.159992422793407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101376931219515,0,0,0.872100625521786,0,0,1.39986421625363,1.43752564364972,0,0,0,0,0.286533439938757,0,9.5088736604011,8.99284664762456,12.0427966666174,0.677689064138264,0,1.3498495759221,2.96659908770092,2.8419204597844,2.09720077362883,3.07374644257244,1.8664130215526,2.43010688997043,2.3135745748652,20.2812198926701,16.3442720304194,2.44981598429908,2.01275489138296,2.75765635983006,17.6185409599022,26.8143409978894,26.4203237200739,6.72620067423989,5.39777097254217,8.85552729946492,18.9844439320939,20.8222165711722,20.3221669543157,15.0260578591571,17.3693450574906,8.01517617048792,0.605809546665472,2.11600368298999,0.869593466105033,0,0,0,0,0,1.68533304158102,0,0,0,0.14084341977668,0,0,0,0,0.253359865475099,0,0.91347103775248,0.258937883647172,10.3909497345377,1.21439728736295,1.52232739156071,1.15307748628029,1.65794904607885,1.52865319276416,2.13633205260448,0,0,0,0.647067399789637,0.441683036920787,0.969750506270444,0,9.9545470983926,11.7290155815535,0.510914110417183,0,0,0,27.861058929297,24.7050325522058,3.26701315493447,38.7628234028777,35.8001640262463,24.103413168909,25.9586020908412,2.74966282395854,4.10543003013307,17.1851475734899,1.89397670297827,2.34216797332867,2.29902104433473,1.80062129805349,2.41127708537144,3.6739709541717,3.84341160854549,1.96773621575431,8.2785078636485,4.52692785158969,3.9712276835242,2.99116911078713,1.31517439456545,2.22437799380478,0.348252166522167,0.61734640922383,2.38841120182192,0,0,0,0.207125772535502,0.703578179943289,0.180062061461015,0.23674473558521,0,0,0,0,0.116765342367169,0,0,0,0,0,0,31.5434922846191,6.79170441703277,0,0,3.19932375802851,1.16118335930219,1.03093969057675,0.605050573870028,0.22237804384487,0.190225626112559,0,0,0,0.198956472041151,0.19496408711912,0,0,0.199141273254367,5.12103332573321,2.74196430263349,4.50830942692322,3.25842124552503,3.87904974335251,2.52488951605147,1.64414996523069,4.72352473534727,2.82597710114475,2.59134044235781,0,0.166845105716094,0,0,0,0,0.25462585178142,0,0.324270453550071,0,0,0.372140947668503,0,0.252578877947112,0,0,0,1.89491411770485,0.488894929326078,1.01847051465113,0.234690248288502,0.167506257441816,0,0.195133647857799,0.157635144106191,0,0,0.163863314715738,0,0,1.50791283939272,9.79030230873677,0,0,20.068823748474,19.2227166011213,0,0,0.315508219416257,0.390438744296638,0.646270193198397,0,0,1.13230612315533,0.404810701674894,0,0,25.7057053137446,0.709700426041343,1.95872164033981,0.81443479676788,3.79431282836832,1.32745138339963,2.42780636154981,1.209294227859,1.32023555829129,1.47650946440386,0.922305443831782,1.80899805217755,0.727067458955011,0.356497378384721,0,0,0,3.40439605753788,1.98067203434441,2.58717367565509,1.92903331528433,1.77340233642274,1.96205699362278,3.29098041204242,2.74018454203139,0.469343416127421,0,1.7642271844397,0.16488625294148,0.968786560175433,0.784068024066026,0.358117032009409,0.656563598980245,0,12.0526446306831,0.170870880797853,0.206386867963223,0.185194527369712,0,0.136694227721025,0,0.169978429993855,0.139951452323658,0.138199973804424,0,3.00519193902079,0.609958401380546,0.86404272657441,0.418176592028937,0.655087691238533,0.269728692769641,0.661227645802687,0.523511883968059,0.129614973291793,0,2.25477175473676,2.24274819065968,0.992750942742586,0.972255941720238,0.387479470433193,1.35164900392623,1.5256441023948,1.8228613878153,1.15345278868282,0.966336483304024,1.72818003754719,0,2.43270258348197,1.43795340030758,0.25984164595559,0.179026695667481,0,0,0,0.100966449948148,0.15241361331,0,0.0974578807397524,0,0,0,1.55390167361845,0.538283139656854,0.671538465456314,0.19318959403219,0.93841237725591,3.29672923681077,0.643105137237198,2.50786052017682,52.5219213633872,50.1754507792823,53.2792827498639,59.2893479085722,39.7347861466973,33.9927253825365,43.8764625150674,38.727623477283,30.8136838109259,34.1721805756201,2.49089634202024,3.99024873401031,2.39027048055788,2.18796045361465,2.30574478890781,1.65459157605013,1.55572709461131,1.44224540067226,0.64183841918363,2.52697211763797,3.54871019846336,2.26351609663291,0.936415074698824,1.72867911493147,1.26358031702349,0.952587382566147,1.27472758539341,1.15745532278223,0.412085900803307,2.20798380201596,1.37147700954166,1.59728225543404,1.1921809497366,2.47088908274958,2.07040636913727,1.86152137361688,2.0122077016005,2.36762740294059,1.7654534799962,3.92799590160417,1.30498519936592,1.37906275325789,2.45538625901814,2.32405261778949,1.73615949883027,2.99772693525535,0.935726433781634,2.57845264857958,2.29545998482612,0.661774257358546,0.231867835620421
|short_description=p4@Abr
|short_description=p4@Abr
}}
}}

Latest revision as of 17:01, 25 September 2015

Short description:p4@Abr
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_4_at_Abr_5end
Coexpression cluster:MCL_coexpression_mm9:1
Association with transcript: 0bp_to_ENSMUST00000108407_5end
EntrezGene:Abr
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p4@Abr

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.96
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A35.36
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.10
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.26
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.16
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.10
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.87
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C41.40
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.29
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C39.51
Mouse Granule cells, donor2.CNhs12357.11731-123E38.99
Mouse Granule cells, donor3.CNhs12108.11636-122C712.04
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.68
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C71.35
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E72.97
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D22.84
Mouse Microglia, donor1.CNhs12629.11718-123C82.10
Mouse Microglia, donor2.CNhs12634.11736-123E83.07
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D51.87
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F52.43
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D92.31
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F120.28
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D516.34
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D22.45
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F22.01
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D62.76
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D317.62
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F326.81
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D726.42
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D46.73
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F45.40
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D88.86
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E418.98
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E520.82
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I620.32
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D615.03
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F617.37
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E18.02
Mouse Schwann, donor1.CNhs12507.11728-123D90.61
Mouse Schwann, donor2.CNhs12573.11746-123F92.12
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.87
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A71.69
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.14
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.25
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.91
accessory axillary lymph node, adult.CNhs10475.1063-29H90.26
adrenal gland, adult.CNhs10508.49-24D710.39
adrenal gland, embryo E14.CNhs11038.406-44C51.21
adrenal gland, embryo E16.CNhs11004.1254-43D61.52
adrenal gland, embryo E17.CNhs11043.1263-45I11.15
adrenal gland, embryo E18.CNhs11026.1262-18F51.66
adrenal gland, neonate N00.CNhs11191.1311-23C11.53
adrenal gland, neonate N25.CNhs11223.1377-27I32.14
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.65
bone (os femoris), neonate N16.CNhs11225.1525-43A60.44
bone (os femoris), neonate N20.CNhs11195.1350-25C30.97
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B29.95
cerebellum, neonate N30.CNhs11135.1395-42I211.73
colon, adult.CNhs10468.36-18H70.51
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A427.86
corpus striatum, adult.CNhs10487.19-21D824.71
corpus striatum, neonate N00.CNhs11226.630-43F13.27
cortex, adult.CNhs10473.12-14D538.76
cortex, neonate N30.CNhs11107.1392-42F235.80
diencephalon, adult.CNhs10482.20-12F224.10
diencephalon, neonate N30.CNhs11201.1388-42B225.96
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B12.75
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A24.11
epididymis, adult.CNhs10490.58-23B217.19
eyeball, adult.CNhs10484.31-12G41.89
eyeball, embryo E12.CNhs11016.345-16C62.34
eyeball, embryo E14.CNhs10521.399-16E22.30
eyeball, embryo E15.CNhs10593.426-16C91.80
eyeball, embryo E17.CNhs11023.1261-18D42.41
eyeball, neonate N00.CNhs11207.633-15C63.67
eyeball, neonate N01.CNhs11140.1532-43E73.84
eyeball, neonate N02.CNhs11205.1551-44G81.97
eyeball, neonate N16.CNhs11188.777-19A28.28
forelimb, embryo E11.CNhs10596.335-25E24.53
forelimb, embryo E12.CNhs10600.359-14H23.97
forelimb, embryo E13.CNhs10589.384-1E22.99
forelimb, embryo E14.CNhs10577.413-26A81.32
forelimb, embryo E15.CNhs11007.437-20E72.22
forelimb, embryo E17.CNhs10598.1517-43C40.35
forelimb, embryo E18.CNhs11008.1520-43B50.62
gonad, embryo E13.CNhs11044.1564-45I62.39
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.21
heart, embryo E12.CNhs11015.353-12F50.70
heart, embryo E13.CNhs11013.376-3I90.18
heart, embryo E14.CNhs10597.403-26D40.24
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.12
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E831.54
hippocampus, neonate N00.CNhs11228.627-43G16.79
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I53.20
intestine, embryo E13.CNhs11010.381-16D51.16
intestine, embryo E15.CNhs10602.976-16D81.03
intestine, embryo E16.CNhs10585.463-22H40.61
intestine, embryo E17.CNhs10582.482-18D30.22
intestine, embryo E18.CNhs10526.1289-20F70.19
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.20
intestine, neonate N10.CNhs11098.755-23A50.19
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.20
kidney, embryo E14.CNhs10606.411-4I95.12
kidney, embryo E15.CNhs10997.434-16F82.74
kidney, embryo E16.CNhs10584.464-22A54.51
kidney, embryo E17.CNhs11028.483-18I23.26
kidney, embryo E18.CNhs11001.1288-20C73.88
kidney, neonate N00.CNhs11214.646-21G72.52
kidney, neonate N10.CNhs11206.758-6D51.64
kidney, neonate N20.CNhs11113.832-19I14.72
kidney, neonate N25.CNhs11122.1353-25F32.83
kidney, neonate N30.CNhs11203.1385-42H12.59
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.17
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.25
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.32
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.37
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.25
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G21.89
lung, embryo E14.CNhs10604.404-26F80.49
lung, embryo E15.CNhs11020.432-17C51.02
lung, embryo E16.CNhs10998.458-17B60.23
lung, embryo E17.CNhs10605.480-44A60.17
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.20
lung, neonate N06.CNhs11212.683-20E50.16
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.16
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A11.51
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A19.79
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C220.07
medulla oblongata, neonate N30.CNhs11200.1396-42A319.22
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.32
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.65
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D91.13
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.40
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I925.71
ovary, adult.CNhs10507.91-2I70.71
ovary, embryo E18.CNhs11040.505-44H71.96
ovary, neonate N00.CNhs11217.1299-22I40.81
oviduct, adult pregnant day01.CNhs10500.988-6G63.79
pancreas, adult.CNhs10486.34-16E41.33
pancreas, embryo E14.CNhs11012.405-44F42.43
pancreas, embryo E15.CNhs11042.1556-45F21.21
pancreas, embryo E16.CNhs11003.460-26E51.32
pancreas, embryo E17.CNhs10599.1558-45G31.48
pancreas, embryo E18.CNhs10580.1535-43I70.92
pancreas, neonate N00.CNhs11105.645-26G91.81
pancreas, neonate N01.CNhs11138.1531-43D70.73
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G83.40
pituitary gland, embryo E12.CNhs11018.346-16E61.98
pituitary gland, embryo E13.CNhs11009.370-44C72.59
pituitary gland, embryo E14.CNhs11037.398-44A51.93
pituitary gland, embryo E15.CNhs10592.427-16B91.77
pituitary gland, embryo E16.CNhs11036.449-43F61.96
pituitary gland, embryo E17.CNhs11039.1265-44F53.29
pituitary gland, neonate N00.CNhs11190.1308-22E92.74
placenta, adult pregnant day10.CNhs10472.539-13I70.47
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F81.76
skin, adult.CNhs10492.30-1C30.16
skin, neonate N00.CNhs11124.650-25G40.97
skin, neonate N03.CNhs11215.662-22H30.78
skin, neonate N06.CNhs11097.693-20I50.36
skin, neonate N10.CNhs11108.762-6C40.66
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C912.05
spleen, adult.CNhs10465.25-2G20.17
spleen, embryo E16.CNhs11035.461-43C10.21
spleen, embryo E18.CNhs11011.1271-21F20.19
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.14
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.17
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.14
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.14
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E33.01
stomach, embryo E15.CNhs10603.1252-16G80.61
stomach, embryo E16.CNhs11022.459-17D40.86
stomach, embryo E17.CNhs11006.1035-18D50.42
stomach, embryo E18.CNhs10999.1286-20C60.66
stomach, neonate N03.CNhs11193.1340-24B80.27
stomach, neonate N07.CNhs11210.718-18A90.66
stomach, neonate N25.CNhs11104.1355-25E40.52
stomach, neonate N30.CNhs11134.1386-42I10.13
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G52.25
testis, embryo E13.CNhs11031.389-23F52.24
testis, embryo E15.CNhs11034.443-27C50.99
testis, embryo E16.CNhs11033.470-26G50.97
testis, embryo E17.CNhs11029.486-18I50.39
testis, embryo E18.CNhs11027.503-18G51.35
testis, neonate N00.CNhs11189.1300-22B71.53
testis, neonate N07.CNhs11222.726-26I41.82
testis, neonate N10.CNhs11204.763-44D91.15
testis, neonate N20.CNhs11110.839-18H30.97
testis, neonate N30.CNhs11130.1391-42E21.73
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I42.43
thymus, embryo E15.CNhs11005.430-45I21.44
thymus, embryo E16.CNhs11002.456-26C50.26
thymus, embryo E17.CNhs10581.478-18C10.18
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.10
thymus, neonate N07.CNhs11211.713-19D30.15
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.10
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H31.55
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.54
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.67
urinary bladder, adult.CNhs10481.879-12E40.19
uterus, adult pregnant day19.CNhs10497.590-15F50.94
uterus, adult.CNhs10509.92-27E53.30
vagina, adult.CNhs10502.89-27D50.64
vesicular gland, adult.CNhs10491.51-27F82.51
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A152.52
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A250.18
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A353.28
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D759.29
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A439.73
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A533.99
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A643.88
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A738.73
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A830.81
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A934.17
whole body, embryo E11.CNhs11014.324-5I82.49
whole body, embryo E12.CNhs10587.857-27C93.99
whole body, embryo E13.CNhs10512.372-23H22.39
whole body, embryo E14.5.CNhs10578.420-27D22.19
whole body, embryo E14.CNhs10519.395-14B12.31
whole body, embryo E16.CNhs10514.453-14F21.65
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.56
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.44
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.64
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G52.53
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G53.55
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G52.26
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.94
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.73
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.26
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.27
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.16
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G52.21
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.37
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.60
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.19
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G52.47
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G52.07
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.86
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G52.01
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G52.37
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.77
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G53.93
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.30
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.38
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G52.46
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G52.32
whole body, embryo E17.5.CNhs10513.490-9F91.74
whole body, embryo E17.CNhs10517.475-3I53.00
whole body, embryo E18.CNhs10516.493-3B30.94
whole body, neonate N00.CNhs10525.657-19C22.58
whole body, neonate N01.CNhs10576.659-23C62.30
whole body, neonate N06.CNhs10515.692-21D10.66
whole body, neonate N10.CNhs10518.761-6B40.23





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)2.78e-1323
neuroblast (sensu Vertebrata)2.78e-1323
neuron6.98e-0733
neuronal stem cell6.98e-0733
neuroblast6.98e-0733
electrically signaling cell6.98e-0733

Uber anatomy
Ontology termp-valuen
regional part of nervous system1.32e-2654
neurectoderm1.65e-2564
neural plate1.65e-2564
presumptive neural plate1.65e-2564
neural tube6.22e-2552
neural rod6.22e-2552
future spinal cord6.22e-2552
neural keel6.22e-2552
central nervous system1.42e-2373
nervous system3.68e-2375
pre-chordal neural plate1.15e-2249
brain1.60e-2147
future brain1.60e-2147
regional part of brain9.36e-2146
ectoderm-derived structure4.35e-2095
ectoderm4.35e-2095
presumptive ectoderm4.35e-2095
anterior neural tube8.14e-2040
ecto-epithelium2.89e-1973
regional part of forebrain4.97e-1939
forebrain4.97e-1939
future forebrain4.97e-1939
gray matter8.54e-1934
brain grey matter1.80e-1529
regional part of telencephalon1.80e-1529
telencephalon1.80e-1529
structure with developmental contribution from neural crest1.54e-1492
cerebral cortex1.43e-1021
cerebral hemisphere1.43e-1021
pallium1.43e-1021
occipital lobe1.14e-0910
visual cortex1.14e-0910
neocortex1.14e-0910
cavitated compound organ1.16e-0921
regional part of cerebral cortex2.98e-0917
kidney7.12e-0714
kidney mesenchyme7.12e-0714
upper urinary tract7.12e-0714
kidney rudiment7.12e-0714
kidney field7.12e-0714
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr11:76384845..76384866,-&oldid=4203408"