Personal tools

FFCP PHASE1:Mm9::chr2:129418406..129418417,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
(One intermediate revision by the same user not shown)
Line 1: Line 1:
{{FFCP|EntrezGene=19261|HGNC=|MCL_coexpression_id=2|UniProt=|association_with_transcript=-153bp_to_ENSMUST00000127751_5end|description=CAGE_peak_14_at_Sirpa_5end|id=chr2:129418406..129418417,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0002092,1.33e-08,3;CL:0002540,1.33e-08,3;CL:0002610,2.43e-08,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000955!7.28e-11!50;UBERON:0006238!7.28e-11!50;UBERON:0002616!2.88e-10!49;UBERON:0002791!1.81e-09!29;UBERON:0003528!1.81e-09!29;UBERON:0001893!1.81e-09!29;UBERON:0002021!1.86e-09!10;UBERON:0000411!1.86e-09!10;UBERON:0001950!1.86e-09!10;UBERON:0003080!4.92e-09!40;UBERON:0000033!6.25e-09!63;UBERON:0002780!1.61e-08!39;UBERON:0001890!1.61e-08!39;UBERON:0006240!1.61e-08!39;UBERON:0002020!3.94e-08!34;UBERON:0000956!1.07e-07!21;UBERON:0001869!1.07e-07!21;UBERON:0000203!1.07e-07!21;UBERON:0001049!1.93e-07!52;UBERON:0005068!1.93e-07!52;UBERON:0006241!1.93e-07!52;UBERON:0007135!1.93e-07!52;UBERON:0003056!2.64e-07!49;UBERON:0001017!3.63e-07!73;UBERON:0005743!3.63e-07!73;UBERON:0002619!7.40e-07!17|ontology_enrichment_uberon_v019_2=UBERON:0002021,2.84e-29,10;UBERON:0000411,2.84e-29,10;UBERON:0001950,2.84e-29,10;UBERON:0002619,1.05e-19,17;UBERON:0000956,1.66e-18,21;UBERON:0001869,1.66e-18,21;UBERON:0000203,1.66e-18,21;UBERON:0003080,2.22e-15,40;UBERON:0000073,3.60e-15,54;UBERON:0003528,5.43e-15,29;UBERON:0002791,5.43e-15,29;UBERON:0001893,5.43e-15,29;UBERON:0000955,2.30e-14,47;UBERON:0006238,2.30e-14,47;UBERON:0002780,5.82e-14,39;UBERON:0001890,5.82e-14,39;UBERON:0006240,5.82e-14,39;UBERON:0002616,6.70e-13,46;UBERON:0001017,9.15e-13,73;UBERON:0002020,2.33e-12,34;UBERON:0001016,2.67e-12,75;UBERON:0003056,6.87e-12,49;UBERON:0001049,5.37e-11,52;UBERON:0005068,5.37e-11,52;UBERON:0006241,5.37e-11,52;UBERON:0007135,5.37e-11,52;UBERON:0004121,9.79e-09,95;UBERON:0000924,9.79e-09,95;UBERON:0006601,9.79e-09,95;UBERON:0004684,2.43e-08,3;UBERON:0002275,2.43e-08,3;UBERON:0002346,2.85e-08,64;UBERON:0003075,2.85e-08,64;UBERON:0007284,2.85e-08,64;UBERON:0010371,7.97e-07,73|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.333109761815663,0.202475267389826,0,0.157731082679119,0.411343300817216,0.42438965179803,0.935476191661768,0,0.261199789138935,0.319984845586813,0,0,0,0,0,0,0,0,0,0,0,0,0,4.18531630736908,0.7813353445238,1.0470474879476,5.29408339227913,2.04913645487534,3.39857247121808,0,0,0,0,0.218025156380447,0.439372365468944,0,0.139986421625363,0,0.167782606057736,0,0,0,0.573066879877513,0,0.202316460859598,0,0,0,0,2.2497492932035,5.93319817540185,1.4209602298922,1.19840044207362,0.768436610643109,0.207379224616955,0.135005938331691,0.210324961351382,0,0.220868540951614,0.122490799214954,0.0958454710182364,0,3.30347642998166,1.91531007127782,1.22885226604995,0.131886287730194,0.182975287204819,0,0.558365998002762,0.56276261003168,0.916789486660861,0.294628585473668,0,0,0,0,0.289864488701678,0,0,0,0,0,0.421333260395256,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0.517875767294343,0.593768556259299,0,0,0,0.301445281105245,0.23517741427141,0,0,0.144599356919912,0.884610551949874,0.161766849947409,0.220841518460394,0.484875253135222,0,0.292780797011547,0.209446706813455,0,0.599075622529601,1.19980546198682,0.635351135365324,1.04853447583376,10.5225138648284,0.376963056338593,10.2556348913443,8.95004100656157,1.24672826735736,4.70499662896497,0.305518091550949,0.248813941220186,0,0,0.260240885925407,0,0.180062129805349,0,0.0680364991513279,0,0,0.258703370739016,0,0,0,0.219195732427575,0.278047249225598,0,0,0,0.702213187313235,1.02939162845886,0,0,0,0.180062061461015,0.23674473558521,0.393528463494808,0.771335564436891,0,0,0,0,0.164167464079095,0.0810688095458557,0.438599962275997,0,0.134206418760372,5.04695876553905,0,0,0,0,0.232236671860439,0.128867461322093,0,0.444756087689741,0,0,0.164698954724011,0,0,0.19496408711912,0,0,0.199141273254367,0.189667900953082,0,0,0.407302655690628,0,0.140271639780637,0.0632365371242573,0,0,0.123397163921801,0.296452627087149,0,0,0.899448449539415,0.405720242777006,0.72353147925725,0.25462585178142,0,0,0,0,0,0,0,0.538192240565737,0,0,0,0.162964976442026,0,0,0,0,0.195133647857799,0.472905432318573,0,0,0,0,0,1.50791283939272,0,0,0.275936746304732,0,0.117211686592203,0.163934945376675,0.252470927204373,0,0,0,0,0,0.283076530788832,0.809621403349789,0,0,8.03303291054518,0,0,0,0.329940245945071,0,0,0,0,0.295301892880773,0.307435147943927,0,0,0,0,0,0,0,0,0.129358683782755,0.214337035031592,0,0.178368817602071,0.164549020602121,0,0,0,0,0.16488625294148,0,0.0603129249281559,0,0,0,0,0.170870880797853,0.619160603889667,0.740778109478847,0,0,0.228778173206523,0.169978429993855,0.559805809294632,0.690999869022119,0,0,0,0.108005340821801,0,0,0.134864346384821,0.0826534557253359,0,0.129614973291793,0.621339313086926,0,0.149516546043979,0.165458490457098,0.194451188344048,0,0,0,0,0,0,0,0,0,0.308132871494482,0,0.358053391334963,0,0.120195449519969,0,0,0.0762068066549998,0,0.0974578807397524,0,0.116876902181569,0.226730383615211,0,0,0,0,0.563047426353546,0,0.214368379079066,0,18.0720589637461,13.8097570952153,16.0410743763031,19.9349691518678,12.3314853558716,18.8848474347425,14.1754725048679,11.2580300806055,11.7817026335893,11.39072685854,0,0,0.170733605754134,0,0,0.367687016900028,0,0.206035057238894,0,0.252697211763798,0.25347929989024,0.188626341386076,0.0936415074698824,0.192075457214608,0.114870937911227,0,0.231768651889711,0,0.412085900803307,0.147198920134397,0.342869252385415,0,0,0.290692833264657,0.282328141245992,0.169229215783353,0.182927972872773,0.263069711437843,0.135804113845862,0,0.237270036248348,0,0,0.154936841185966,0,0,0,0.214871054048298,0,0,0.463735671240843|short_description=p14@Sirpa}}
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=19261
|HGNC=
|MCL_coexpression_id=2
|TSSclassifier=NA
|UniProt=
|association_with_transcript=-153bp_to_ENSMUST00000127751_5end
|cluster_id=chr2:129418406..129418417,+
|description=CAGE_peak_14_at_Sirpa_5end
|id=chr2:129418406..129418417,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=CL:0002092,1.33e-08,3;CL:0002540,1.33e-08,3;CL:0002610,2.43e-08,3
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000955!7.28e-11!50;UBERON:0006238!7.28e-11!50;UBERON:0002616!2.88e-10!49;UBERON:0002791!1.81e-09!29;UBERON:0003528!1.81e-09!29;UBERON:0001893!1.81e-09!29;UBERON:0002021!1.86e-09!10;UBERON:0000411!1.86e-09!10;UBERON:0001950!1.86e-09!10;UBERON:0003080!4.92e-09!40;UBERON:0000033!6.25e-09!63;UBERON:0002780!1.61e-08!39;UBERON:0001890!1.61e-08!39;UBERON:0006240!1.61e-08!39;UBERON:0002020!3.94e-08!34;UBERON:0000956!1.07e-07!21;UBERON:0001869!1.07e-07!21;UBERON:0000203!1.07e-07!21;UBERON:0001049!1.93e-07!52;UBERON:0005068!1.93e-07!52;UBERON:0006241!1.93e-07!52;UBERON:0007135!1.93e-07!52;UBERON:0003056!2.64e-07!49;UBERON:0001017!3.63e-07!73;UBERON:0005743!3.63e-07!73;UBERON:0002619!7.40e-07!17
|ontology_enrichment_uberon_v019_2=UBERON:0002021,2.84e-29,10;UBERON:0000411,2.84e-29,10;UBERON:0001950,2.84e-29,10;UBERON:0002619,1.05e-19,17;UBERON:0000956,1.66e-18,21;UBERON:0001869,1.66e-18,21;UBERON:0000203,1.66e-18,21;UBERON:0003080,2.22e-15,40;UBERON:0000073,3.60e-15,54;UBERON:0003528,5.43e-15,29;UBERON:0002791,5.43e-15,29;UBERON:0001893,5.43e-15,29;UBERON:0000955,2.30e-14,47;UBERON:0006238,2.30e-14,47;UBERON:0002780,5.82e-14,39;UBERON:0001890,5.82e-14,39;UBERON:0006240,5.82e-14,39;UBERON:0002616,6.70e-13,46;UBERON:0001017,9.15e-13,73;UBERON:0002020,2.33e-12,34;UBERON:0001016,2.67e-12,75;UBERON:0003056,6.87e-12,49;UBERON:0001049,5.37e-11,52;UBERON:0005068,5.37e-11,52;UBERON:0006241,5.37e-11,52;UBERON:0007135,5.37e-11,52;UBERON:0004121,9.79e-09,95;UBERON:0000924,9.79e-09,95;UBERON:0006601,9.79e-09,95;UBERON:0004684,2.43e-08,3;UBERON:0002275,2.43e-08,3;UBERON:0002346,2.85e-08,64;UBERON:0003075,2.85e-08,64;UBERON:0007284,2.85e-08,64;UBERON:0010371,7.97e-07,73
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.333109761815663,0.202475267389826,0,0.157731082679119,0.411343300817216,0.42438965179803,0.935476191661768,0,0.261199789138935,0.319984845586813,0,0,0,0,0,0,0,0,0,0,0,0,0,4.18531630736908,0.7813353445238,1.0470474879476,5.29408339227913,2.04913645487534,3.39857247121808,0,0,0,0,0.218025156380447,0.439372365468944,0,0.139986421625363,0,0.167782606057736,0,0,0,0.573066879877513,0,0.202316460859598,0,0,0,0,2.2497492932035,5.93319817540185,1.4209602298922,1.19840044207362,0.768436610643109,0.207379224616955,0.135005938331691,0.210324961351382,0,0.220868540951614,0.122490799214954,0.0958454710182364,0,3.30347642998166,1.91531007127782,1.22885226604995,0.131886287730194,0.182975287204819,0,0.558365998002762,0.56276261003168,0.916789486660861,0.294628585473668,0,0,0,0,0.289864488701678,0,0,0,0,0,0.421333260395256,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0.517875767294343,0.593768556259299,0,0,0,0.301445281105245,0.23517741427141,0,0,0.144599356919912,0.884610551949874,0.161766849947409,0.220841518460394,0.484875253135222,0,0.292780797011547,0.209446706813455,0,0.599075622529601,1.19980546198682,0.635351135365324,1.04853447583376,10.5225138648284,0.376963056338593,10.2556348913443,8.95004100656157,1.24672826735736,4.70499662896497,0.305518091550949,0.248813941220186,0,0,0.260240885925407,0,0.180062129805349,0,0.0680364991513279,0,0,0.258703370739016,0,0,0,0.219195732427575,0.278047249225598,0,0,0,0.702213187313235,1.02939162845886,0,0,0,0.180062061461015,0.23674473558521,0.393528463494808,0.771335564436891,0,0,0,0,0.164167464079095,0.0810688095458557,0.438599962275997,0,0.134206418760372,5.04695876553905,0,0,0,0,0.232236671860439,0.128867461322093,0,0.444756087689741,0,0,0.164698954724011,0,0,0.19496408711912,0,0,0.199141273254367,0.189667900953082,0,0,0.407302655690628,0,0.140271639780637,0.0632365371242573,0,0,0.123397163921801,0.296452627087149,0,0,0.899448449539415,0.405720242777006,0.72353147925725,0.25462585178142,0,0,0,0,0,0,0,0.538192240565737,0,0,0,0.162964976442026,0,0,0,0,0.195133647857799,0.472905432318573,0,0,0,0,0,1.50791283939272,0,0,0.275936746304732,0,0.117211686592203,0.163934945376675,0.252470927204373,0,0,0,0,0,0.283076530788832,0.809621403349789,0,0,8.03303291054518,0,0,0,0.329940245945071,0,0,0,0,0.295301892880773,0.307435147943927,0,0,0,0,0,0,0,0,0.129358683782755,0.214337035031592,0,0.178368817602071,0.164549020602121,0,0,0,0,0.16488625294148,0,0.0603129249281559,0,0,0,0,0.170870880797853,0.619160603889667,0.740778109478847,0,0,0.228778173206523,0.169978429993855,0.559805809294632,0.690999869022119,0,0,0,0.108005340821801,0,0,0.134864346384821,0.0826534557253359,0,0.129614973291793,0.621339313086926,0,0.149516546043979,0.165458490457098,0.194451188344048,0,0,0,0,0,0,0,0,0,0.308132871494482,0,0.358053391334963,0,0.120195449519969,0,0,0.0762068066549998,0,0.0974578807397524,0,0.116876902181569,0.226730383615211,0,0,0,0,0.563047426353546,0,0.214368379079066,0,18.0720589637461,13.8097570952153,16.0410743763031,19.9349691518678,12.3314853558716,18.8848474347425,14.1754725048679,11.2580300806055,11.7817026335893,11.39072685854,0,0,0.170733605754134,0,0,0.367687016900028,0,0.206035057238894,0,0.252697211763798,0.25347929989024,0.188626341386076,0.0936415074698824,0.192075457214608,0.114870937911227,0,0.231768651889711,0,0.412085900803307,0.147198920134397,0.342869252385415,0,0,0.290692833264657,0.282328141245992,0.169229215783353,0.182927972872773,0.263069711437843,0.135804113845862,0,0.237270036248348,0,0,0.154936841185966,0,0,0,0.214871054048298,0,0,0.463735671240843
|short_description=p14@Sirpa
}}

Latest revision as of 17:22, 25 September 2015

Short description:p14@Sirpa
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_14_at_Sirpa_5end
Coexpression cluster:MCL_coexpression_mm9:2
Association with transcript: -153bp_to_ENSMUST00000127751_5end
EntrezGene:Sirpa
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p14@Sirpa

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.20
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.16
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.41
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.42
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.94
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.26
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.32
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G84.19
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.78
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H31.05
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G95.29
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H22.05
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H43.40
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.22
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.44
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.14
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.17
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.57
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.20
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C72.25
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E75.93
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D21.42
Mouse Microglia, donor1.CNhs12629.11718-123C81.20
Mouse Microglia, donor2.CNhs12634.11736-123E80.77
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.21
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.14
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.21
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.22
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.12
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.10
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D33.30
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F31.92
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D71.23
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.13
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.18
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.56
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.56
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.92
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.29
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.00
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.00
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.29
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.42
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.00
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.11
accessory axillary lymph node, adult.CNhs10475.1063-29H90.52
adrenal gland, adult.CNhs10508.49-24D70.59
adrenal gland, embryo E14.CNhs11038.406-44C50.00
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.30
adrenal gland, neonate N00.CNhs11191.1311-23C10.24
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.14
bone (os femoris), adult.CNhs10483.56-12G20.88
bone (os femoris), neonate N02.CNhs11227.1985-43F50.16
bone (os femoris), neonate N16.CNhs11225.1525-43A60.22
bone (os femoris), neonate N20.CNhs11195.1350-25C30.48
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.29
cerebellum, neonate N30.CNhs11135.1395-42I20.21
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.60
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D11.20
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.64
corpora quadrigemina, adult.CNhs10501.16-22A41.05
corpus striatum, adult.CNhs10487.19-21D810.52
corpus striatum, neonate N00.CNhs11226.630-43F10.38
cortex, adult.CNhs10473.12-14D510.26
cortex, neonate N30.CNhs11107.1392-42F28.95
diencephalon, adult.CNhs10482.20-12F21.25
diencephalon, neonate N30.CNhs11201.1388-42B24.70
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.31
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.25
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.00
eyeball, embryo E12.CNhs11016.345-16C60.26
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.18
eyeball, embryo E17.CNhs11023.1261-18D40.00
eyeball, neonate N00.CNhs11207.633-15C60.07
eyeball, neonate N01.CNhs11140.1532-43E70.00
eyeball, neonate N02.CNhs11205.1551-44G80.00
eyeball, neonate N16.CNhs11188.777-19A20.26
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.22
forelimb, embryo E15.CNhs11007.437-20E70.28
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.70
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D21.03
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.18
heart, embryo E14.CNhs10597.403-26D40.24
heart, embryo E15.CNhs11017.431-16C80.39
heart, embryo E16.CNhs11021.457-17C60.77
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.16
heart, neonate N16.CNhs11209.782-15G10.08
heart, neonate N20.CNhs11127.821-26I60.44
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.13
hippocampus, adult.CNhs10478.13-16E85.05
hippocampus, neonate N00.CNhs11228.627-43G10.00
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.23
intestine, embryo E15.CNhs10602.976-16D80.13
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.44
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.16
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.19
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.20
kidney, embryo E14.CNhs10606.411-4I90.19
kidney, embryo E15.CNhs10997.434-16F80.00
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.41
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.14
kidney, neonate N10.CNhs11206.758-6D50.06
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.12
liver, adult pregnant day01.CNhs10466.508-5B20.30
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.90
liver, embryo E15.CNhs10520.433-16D70.41
liver, embryo E16.CNhs10523.462-17F50.72
liver, embryo E17.CNhs10510.481-18A30.25
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.54
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.16
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.20
lung, neonate N06.CNhs11212.683-20E50.47
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A11.51
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.28
medulla oblongata, adult.CNhs10477.17-12C20.00
medulla oblongata, neonate N30.CNhs11200.1396-42A30.12
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.16
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.25
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.28
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.81
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I98.03
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.00
oviduct, adult pregnant day01.CNhs10500.988-6G60.33
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.30
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.00
pituitary gland, embryo E13.CNhs11009.370-44C70.13
pituitary gland, embryo E14.CNhs11037.398-44A50.21
pituitary gland, embryo E15.CNhs10592.427-16B90.00
pituitary gland, embryo E16.CNhs11036.449-43F60.18
pituitary gland, embryo E17.CNhs11039.1265-44F50.16
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.16
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.06
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C90.00
spleen, adult.CNhs10465.25-2G20.17
spleen, embryo E16.CNhs11035.461-43C10.62
spleen, embryo E18.CNhs11011.1271-21F20.74
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.23
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.17
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.56
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.69
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.11
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.13
stomach, neonate N07.CNhs11210.718-18A90.08
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.13
submandibular gland, adult.CNhs10469.59-29C10.62
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.15
testis, embryo E15.CNhs11034.443-27C50.17
testis, embryo E16.CNhs11033.470-26G50.19
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.00
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.31
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.36
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.12
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.08
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.10
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.12
tongue, adult.CNhs10499.32-1B40.23
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.56
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.21
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A118.07
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A213.81
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A316.04
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D719.93
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A412.33
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A518.88
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A614.18
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A711.26
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A811.78
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A911.39
whole body, embryo E11.CNhs11014.324-5I80.00
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.17
whole body, embryo E14.5.CNhs10578.420-27D20.00
whole body, embryo E14.CNhs10519.395-14B10.00
whole body, embryo E16.CNhs10514.453-14F20.37
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.21
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.09
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.11
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.23
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.15
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.29
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.28
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.17
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.18
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.26
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.14
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.24
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.15
whole body, embryo E17.5.CNhs10513.490-9F90.00
whole body, embryo E17.CNhs10517.475-3I50.00
whole body, embryo E18.CNhs10516.493-3B30.00
whole body, neonate N00.CNhs10525.657-19C20.21
whole body, neonate N01.CNhs10576.659-23C60.00
whole body, neonate N06.CNhs10515.692-21D10.00
whole body, neonate N10.CNhs10518.761-6B40.46





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
bone marrow cell1.33e-083
mesenchymal stem cell of the bone marrow1.33e-083
raphe nuclei neuron2.43e-083

Uber anatomy
Ontology termp-valuen
occipital lobe2.84e-2910
visual cortex2.84e-2910
neocortex2.84e-2910
regional part of cerebral cortex1.05e-1917
cerebral cortex1.66e-1821
cerebral hemisphere1.66e-1821
pallium1.66e-1821
anterior neural tube2.22e-1540
regional part of nervous system3.60e-1554
brain grey matter5.43e-1529
regional part of telencephalon5.43e-1529
telencephalon5.43e-1529
brain2.30e-1447
future brain2.30e-1447
regional part of forebrain5.82e-1439
forebrain5.82e-1439
future forebrain5.82e-1439
regional part of brain6.70e-1346
central nervous system9.15e-1373
gray matter2.33e-1234
nervous system2.67e-1275
pre-chordal neural plate6.87e-1249
neural tube5.37e-1152
neural rod5.37e-1152
future spinal cord5.37e-1152
neural keel5.37e-1152
ectoderm-derived structure9.79e-0995
ectoderm9.79e-0995
presumptive ectoderm9.79e-0995
raphe nuclei2.43e-083
reticular formation2.43e-083
neurectoderm2.85e-0864
neural plate2.85e-0864
presumptive neural plate2.85e-0864
ecto-epithelium7.97e-0773
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr2:129418406..129418417,%2B&oldid=4204297"