FFCP PHASE1:Mm9::chr2:129418831..129418863,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=19261 | |EntrezGene=19261 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1 | |||
|TSSclassifier=NA | |||
|UniProt=P97797,Q6P6I8 | |UniProt=P97797,Q6P6I8 | ||
|association_with_transcript=-67bp_to_NM_001177647,NM_007547,uc008mia.2,uc008mib.2_5end | |association_with_transcript=-67bp_to_NM_001177647,NM_007547,uc008mia.2,uc008mib.2_5end | ||
|cluster_id=chr2:129418831..129418863,+ | |||
|description=CAGE_peak_3_at_Sirpa_5end | |description=CAGE_peak_3_at_Sirpa_5end | ||
|id=chr2:129418831..129418863,+ | |id=chr2:129418831..129418863,+ | ||
|ontology_enrichment_celltype=CL:0002319!1.74e-11!43;CL:0000221!3.15e-11!44;CL:0000133!3.15e-11!44;CL:0000117!4.87e-11!23;CL:0000337!4.87e-11!23;CL:0000055!1.13e-08!50;CL:0000540!1.31e-08!33;CL:0000047!1.31e-08!33;CL:0000031!1.31e-08!33;CL:0000404!1.31e-08!33 | |ontology_enrichment_celltype=CL:0002319!1.74e-11!43;CL:0000221!3.15e-11!44;CL:0000133!3.15e-11!44;CL:0000117!4.87e-11!23;CL:0000337!4.87e-11!23;CL:0000055!1.13e-08!50;CL:0000540!1.31e-08!33;CL:0000047!1.31e-08!33;CL:0000031!1.31e-08!33;CL:0000404!1.31e-08!33 | ||
|ontology_enrichment_celltype_v019_2=CL:0000117,4.79e-12,23;CL:0000337,4.79e-12,23;CL:0002319,7.96e-12,43;CL:0000221,3.31e-11,44;CL:0000133,3.31e-11,44;CL:0000540,1.40e-08,33;CL:0000047,1.40e-08,33;CL:0000031,1.40e-08,33;CL:0000404,1.40e-08,33 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!5.43e-28!73;UBERON:0005743!5.43e-28!73;UBERON:0000073!1.66e-27!75;UBERON:0001016!1.66e-27!75;UBERON:0004121!1.87e-26!102;UBERON:0000924!1.87e-26!102;UBERON:0006601!1.87e-26!102;UBERON:0001049!3.02e-24!52;UBERON:0005068!3.02e-24!52;UBERON:0006241!3.02e-24!52;UBERON:0007135!3.02e-24!52;UBERON:0000955!1.13e-23!50;UBERON:0006238!1.13e-23!50;UBERON:0000033!1.50e-23!63;UBERON:0002616!4.74e-23!49;UBERON:0002346!2.92e-22!71;UBERON:0003075!2.92e-22!71;UBERON:0007284!2.92e-22!71;UBERON:0002020!5.08e-18!34;UBERON:0003056!1.00e-17!49;UBERON:0003080!1.16e-17!40;UBERON:0002780!5.07e-17!39;UBERON:0001890!5.07e-17!39;UBERON:0006240!5.07e-17!39;UBERON:0002791!1.77e-15!29;UBERON:0003528!1.77e-15!29;UBERON:0001893!1.77e-15!29;UBERON:0000956!3.97e-11!21;UBERON:0001869!3.97e-11!21;UBERON:0000203!3.97e-11!21;UBERON:0002619!8.57e-11!17;UBERON:0007811!7.11e-10!86;UBERON:0000153!1.42e-09!94;UBERON:0002021!6.52e-08!10;UBERON:0000411!6.52e-08!10;UBERON:0001950!6.52e-08!10;UBERON:0003076!3.36e-07!12;UBERON:0003057!3.36e-07!12;UBERON:0004111!7.96e-07!122 | |ontology_enrichment_uberon=UBERON:0001017!5.43e-28!73;UBERON:0005743!5.43e-28!73;UBERON:0000073!1.66e-27!75;UBERON:0001016!1.66e-27!75;UBERON:0004121!1.87e-26!102;UBERON:0000924!1.87e-26!102;UBERON:0006601!1.87e-26!102;UBERON:0001049!3.02e-24!52;UBERON:0005068!3.02e-24!52;UBERON:0006241!3.02e-24!52;UBERON:0007135!3.02e-24!52;UBERON:0000955!1.13e-23!50;UBERON:0006238!1.13e-23!50;UBERON:0000033!1.50e-23!63;UBERON:0002616!4.74e-23!49;UBERON:0002346!2.92e-22!71;UBERON:0003075!2.92e-22!71;UBERON:0007284!2.92e-22!71;UBERON:0002020!5.08e-18!34;UBERON:0003056!1.00e-17!49;UBERON:0003080!1.16e-17!40;UBERON:0002780!5.07e-17!39;UBERON:0001890!5.07e-17!39;UBERON:0006240!5.07e-17!39;UBERON:0002791!1.77e-15!29;UBERON:0003528!1.77e-15!29;UBERON:0001893!1.77e-15!29;UBERON:0000956!3.97e-11!21;UBERON:0001869!3.97e-11!21;UBERON:0000203!3.97e-11!21;UBERON:0002619!8.57e-11!17;UBERON:0007811!7.11e-10!86;UBERON:0000153!1.42e-09!94;UBERON:0002021!6.52e-08!10;UBERON:0000411!6.52e-08!10;UBERON:0001950!6.52e-08!10;UBERON:0003076!3.36e-07!12;UBERON:0003057!3.36e-07!12;UBERON:0004111!7.96e-07!122 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.42e-30,73;UBERON:0001016,5.02e-30,75;UBERON:0000073,3.82e-29,54;UBERON:0004121,4.51e-28,95;UBERON:0000924,4.51e-28,95;UBERON:0006601,4.51e-28,95;UBERON:0001049,2.60e-27,52;UBERON:0005068,2.60e-27,52;UBERON:0006241,2.60e-27,52;UBERON:0007135,2.60e-27,52;UBERON:0002346,6.53e-25,64;UBERON:0003075,6.53e-25,64;UBERON:0007284,6.53e-25,64;UBERON:0000955,4.35e-24,47;UBERON:0006238,4.35e-24,47;UBERON:0002616,2.20e-23,46;UBERON:0010371,5.42e-23,73;UBERON:0002020,4.41e-20,34;UBERON:0003080,1.04e-19,40;UBERON:0003056,3.07e-19,49;UBERON:0002780,5.70e-19,39;UBERON:0001890,5.70e-19,39;UBERON:0006240,5.70e-19,39;UBERON:0003528,3.84e-17,29;UBERON:0002791,3.84e-17,29;UBERON:0001893,3.84e-17,29;UBERON:0010314,3.00e-15,92;UBERON:0002619,3.02e-12,17;UBERON:0000956,3.99e-12,21;UBERON:0001869,3.99e-12,21;UBERON:0000203,3.99e-12,21;UBERON:0002021,6.48e-09,10;UBERON:0000411,6.48e-09,10;UBERON:0001950,6.48e-09,10;UBERON:0003076,4.30e-08,12;UBERON:0003057,4.30e-08,12 | |||
|phase1_expression=1.60148847104794,0,0,0,0,0.16787927191189,0.467225281191051,0,0,0,0,0,0,0,0.333109761815663,0.202475267389826,0,0.473193248037357,0.274228867211478,0.42438965179803,4.67738095830884,0.893618560807968,0,0.95995453676044,0,0.57423196411502,0.86152399231815,0.215471232685889,0,0,0,0,0,0,0,0,0,3.34825304589526,0.7813353445238,2.09409497589519,3.52938892818609,4.78131839470912,6.79714494243615,0.629484089877886,1.01376931219515,0.917733760808408,3.12956537739216,8.06693078607652,8.34807494390993,9.52706505463989,4.33957907038624,2.87505128729943,0.335565212115473,0,0,0.257259436035947,0,1.03134418455488,9.3065571995415,7.93486468908049,9.50747105259269,1.0165335962074,0,5.39939830368839,8.89979726310277,5.6838409195688,7.49000276296012,12.2949857702897,1.65903379693564,2.56511282830212,0.841299845405528,11.9973413449598,12.1477697523387,3.42974237801871,2.39613677545591,9.19218786610021,37.4393995397922,33.5817699164044,30.26048705148,9.49581271657396,8.23388792421687,7.29278718779464,17.8677119360884,22.5105044012672,26.4340968653881,12.9636577608414,8.54230084794618,5.96478226640962,0.37863096666592,2.04043212288321,2.02905142091174,0,0,1.07940638327563,0,0,1.26399978118577,2.04516387093669,1.81850203222008,0.70667914902068,0.845060518660083,2.56652954828636,2.54805239706646,14.2213340630666,1.08245520505607,0.506719730950197,0,1.37020655662872,1.29468941823586,1.1875371125186,1.56136794089522,1.21786191324856,1.15307748628029,0.904335843315735,1.76383060703557,1.13099932196708,0,2.60278842455841,2.65383165584962,0.808834249737046,1.32504911076236,0.969750506270444,0,16.3957246326466,16.7557365450764,0,0.958520996047362,2.99951365496704,0.889491589511453,19.0234112044125,15.5550204958333,10.6806199295935,31.2883776346098,16.8772201838018,14.3373750746096,14.9261962022337,0.916554274652847,0.248813941220186,0.505445516867349,2.10441855886474,1.82168620147785,0.459804208866946,0.900310649026746,1.20563854268572,1.49680298132921,1.5373646434182,2.81105173679186,5.43277078551933,0.646703978798527,1.32374256117473,1.05570674498369,0.876782929710299,0.556094498451196,1.39300866608867,1.02891068203972,0.796137067273973,0,0,1.70498099637356,0.207125772535502,0.469052119962192,0.540186184383045,0.710234206755631,0.393528463494808,0.617068451549513,0.465067889500816,0.804820204198858,0.233530684734339,0.329119699826961,0.820837320395476,0.810688095458557,2.33919979880532,0.658650345873152,1.07365135008297,30.4920425417985,6.48299057989492,0,0.264450566663544,0.639864751605702,1.39342003116263,0.77320476793256,0.201683524623343,0.667134131534611,0.380451252225118,0,0,0,0.397912944082302,0.19496408711912,0.898819408654221,0,0,1.51734320762465,1.02823661348756,3.38123207019241,1.4255592949172,0.193952487167626,0.98190147846446,1.01178459398812,1.03327103585722,0.470996183524124,1.1105744752962,0.296452627087149,0,0.786235980452812,0.449724224769707,0.405720242777006,0.241177159752417,0.25462585178142,0.863088412352432,0.972811360650212,0,5.75072826109418,1.11642284300551,0.936113019343682,1.76805214562978,0.358794827043824,0,1.84753190166605,0.568474235311454,0.814824882210129,0.339490171550376,0.234690248288502,0.335012514883631,0.476087281772027,0.390267295715598,0.630540576424764,0.664394068946325,0.797273843287435,0.81931657357869,0.863424909329478,1.01254341007058,4.52373851817817,12.5098307278303,0,1.37968373152366,13.4862495589745,9.02529986759964,0.819674726883377,0,0.631016438832513,0,1.07711698866399,0.716906393857656,1.33679204449436,0.849229592366497,2.02405350837447,2.04579100537918,0.790575555893047,14.4594592389813,0.851640511249612,0.534196811001766,0.651547837414304,1.97964147567043,0,0.728341908464944,1.81394134178851,0.565815239267694,1.77181135728464,1.53717573971964,0.258428293168221,2.18120237686503,1.42598951353889,0.632073515871632,0,0,1.02131881726136,1.44048875225048,1.94038025674132,1.50035924522115,1.95074257006501,1.24858172321449,2.46823530903181,3.04464949114599,0.469343416127421,0,0.220528398054962,2.96795255294664,2.09903754704677,0.72375509913787,1.79058516004705,0.492422699235184,0,17.9862542950194,1.02522528478712,1.03193433981611,0.740778109478847,0.376736914009382,0.136694227721025,0.228778173206523,0.509935289981566,0.559805809294632,0.552799895217695,0,1.89801596148681,1.82987520414164,0.756037385752609,0.418176592028937,1.09181281873089,0.404593039154462,0.661227645802687,0.523511883968059,0.518459893167171,1.24267862617385,0,0.598066184175915,0.165458490457098,1.16670713006429,0.904118764344118,0.675824501963113,1.17357238645754,0.781226309063701,0.943734099831398,0.241584120826006,0.288030006257865,0,0.202725215290164,0.205421914329655,0,0.179026695667481,0,0,0.295379054349154,0,0.0762068066549998,0,0.0974578807397524,0.0962118416403295,0.116876902181569,1.81384306892169,0.221985953374065,0,0.335769232728157,0.579568782096571,0.750729901804728,1.09890974560359,2.14368379079066,4.01257683228291,28.2375921308533,17.9526842237799,30.363462212288,62.2108520084149,22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| ||
|short_description=p3@Sirpa | |short_description=p3@Sirpa | ||
}} | }} |
Latest revision as of 17:24, 25 September 2015
Short description: | p3@Sirpa |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Sirpa_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | -67bp_to_NM_001177647, NM_007547, uc008mia.2, uc008mib.2_5end |
EntrezGene: | Sirpa |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 4.79e-12 | 23 |
neuroblast (sensu Vertebrata) | 4.79e-12 | 23 |
neural cell | 7.96e-12 | 43 |
ectodermal cell | 3.31e-11 | 44 |
neurectodermal cell | 3.31e-11 | 44 |
neuron | 1.40e-08 | 33 |
neuronal stem cell | 1.40e-08 | 33 |
neuroblast | 1.40e-08 | 33 |
electrically signaling cell | 1.40e-08 | 33 |