FFCP PHASE1:Mm9::chr2:129419264..129419336,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=19261 | |EntrezGene=19261 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=799 | |||
|TSSclassifier=NA | |||
|UniProt=E0CYM8,E0CX65 | |UniProt=E0CYM8,E0CX65 | ||
|association_with_transcript=0bp_to_ENSMUST00000049262,ENSMUST00000160952,ENSMUST00000163034_5end | |association_with_transcript=0bp_to_ENSMUST00000049262,ENSMUST00000160952,ENSMUST00000163034_5end | ||
|cluster_id=chr2:129419264..129419336,+ | |||
|description=CAGE_peak_2_at_Sirpa_5end | |description=CAGE_peak_2_at_Sirpa_5end | ||
|id=chr2:129419264..129419336,+ | |id=chr2:129419264..129419336,+ | ||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!2.93e-15!52;UBERON:0005068!2.93e-15!52;UBERON:0006241!2.93e-15!52;UBERON:0007135!2.93e-15!52;UBERON:0000033!5.73e-15!63;UBERON:0000955!7.58e-15!50;UBERON:0006238!7.58e-15!50;UBERON:0002616!2.73e-14!49;UBERON:0004121!1.41e-13!102;UBERON:0000924!1.41e-13!102;UBERON:0006601!1.41e-13!102;UBERON:0001017!3.02e-13!73;UBERON:0005743!3.02e-13!73;UBERON:0000073!1.44e-12!75;UBERON:0001016!1.44e-12!75;UBERON:0002346!5.82e-12!71;UBERON:0003075!5.82e-12!71;UBERON:0007284!5.82e-12!71;UBERON:0002020!1.15e-11!34;UBERON:0003056!2.79e-10!49;UBERON:0003080!3.06e-10!40;UBERON:0000475!5.39e-10!200;UBERON:0002780!9.39e-10!39;UBERON:0001890!9.39e-10!39;UBERON:0006240!9.39e-10!39;UBERON:0002791!9.90e-10!29;UBERON:0003528!9.90e-10!29;UBERON:0001893!9.90e-10!29;UBERON:0004111!3.67e-08!122;UBERON:0002021!9.15e-08!10;UBERON:0000411!9.15e-08!10;UBERON:0001950!9.15e-08!10;UBERON:0002619!1.69e-07!17;UBERON:0000025!1.88e-07!114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.28e-16,54;UBERON:0001049,2.89e-15,52;UBERON:0005068,2.89e-15,52;UBERON:0006241,2.89e-15,52;UBERON:0007135,2.89e-15,52;UBERON:0004121,2.02e-14,95;UBERON:0000924,2.02e-14,95;UBERON:0006601,2.02e-14,95;UBERON:0010371,4.93e-14,73;UBERON:0000955,2.56e-13,47;UBERON:0006238,2.56e-13,47;UBERON:0001017,2.98e-13,73;UBERON:0002346,3.88e-13,64;UBERON:0003075,3.88e-13,64;UBERON:0007284,3.88e-13,64;UBERON:0002616,8.90e-13,46;UBERON:0001016,1.42e-12,75;UBERON:0002020,1.13e-11,34;UBERON:0003056,2.76e-10,49;UBERON:0003080,3.03e-10,40;UBERON:0002780,9.31e-10,39;UBERON:0001890,9.31e-10,39;UBERON:0006240,9.31e-10,39;UBERON:0003528,9.81e-10,29;UBERON:0002791,9.81e-10,29;UBERON:0001893,9.81e-10,29;UBERON:0004111,3.99e-08,122;UBERON:0010314,4.63e-08,92;UBERON:0002021,9.09e-08,10;UBERON:0000411,9.09e-08,10;UBERON:0001950,9.09e-08,10;UBERON:0002619,1.68e-07,17;UBERON:0000025,2.04e-07,114 | |||
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| ||
|short_description=p2@Sirpa | |short_description=p2@Sirpa | ||
}} | }} |
Latest revision as of 17:26, 25 September 2015
Short description: | p2@Sirpa |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Sirpa_5end |
Coexpression cluster: | MCL_coexpression_mm9:799 |
Association with transcript: | 0bp_to_ENSMUST00000049262, ENSMUST00000160952, ENSMUST00000163034_5end |
EntrezGene: | Sirpa |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
regional part of nervous system | 2.28e-16 | 54 |
neural tube | 2.89e-15 | 52 |
neural rod | 2.89e-15 | 52 |
future spinal cord | 2.89e-15 | 52 |
neural keel | 2.89e-15 | 52 |
ectoderm-derived structure | 2.02e-14 | 95 |
ectoderm | 2.02e-14 | 95 |
presumptive ectoderm | 2.02e-14 | 95 |
ecto-epithelium | 4.93e-14 | 73 |
brain | 2.56e-13 | 47 |
future brain | 2.56e-13 | 47 |
central nervous system | 2.98e-13 | 73 |
neurectoderm | 3.88e-13 | 64 |
neural plate | 3.88e-13 | 64 |
presumptive neural plate | 3.88e-13 | 64 |
regional part of brain | 8.90e-13 | 46 |
nervous system | 1.42e-12 | 75 |
gray matter | 1.13e-11 | 34 |
pre-chordal neural plate | 2.76e-10 | 49 |
anterior neural tube | 3.03e-10 | 40 |
regional part of forebrain | 9.31e-10 | 39 |
forebrain | 9.31e-10 | 39 |
future forebrain | 9.31e-10 | 39 |
brain grey matter | 9.81e-10 | 29 |
regional part of telencephalon | 9.81e-10 | 29 |
telencephalon | 9.81e-10 | 29 |
anatomical conduit | 3.99e-08 | 122 |
structure with developmental contribution from neural crest | 4.63e-08 | 92 |
occipital lobe | 9.09e-08 | 10 |
visual cortex | 9.09e-08 | 10 |
neocortex | 9.09e-08 | 10 |
regional part of cerebral cortex | 1.68e-07 | 17 |
tube | 2.04e-07 | 114 |