FFCP PHASE1:Mm9::chr2:129419264..129419336,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=19261 | |EntrezGene=19261 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=799 | |||
|TSSclassifier=NA | |||
|UniProt=E0CYM8,E0CX65 | |UniProt=E0CYM8,E0CX65 | ||
|association_with_transcript=0bp_to_ENSMUST00000049262,ENSMUST00000160952,ENSMUST00000163034_5end | |association_with_transcript=0bp_to_ENSMUST00000049262,ENSMUST00000160952,ENSMUST00000163034_5end | ||
|cluster_id=chr2:129419264..129419336,+ | |||
|description=CAGE_peak_2_at_Sirpa_5end | |description=CAGE_peak_2_at_Sirpa_5end | ||
|id=chr2:129419264..129419336,+ | |id=chr2:129419264..129419336,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!2.93e-15!52;UBERON:0005068!2.93e-15!52;UBERON:0006241!2.93e-15!52;UBERON:0007135!2.93e-15!52;UBERON:0000033!5.73e-15!63;UBERON:0000955!7.58e-15!50;UBERON:0006238!7.58e-15!50;UBERON:0002616!2.73e-14!49;UBERON:0004121!1.41e-13!102;UBERON:0000924!1.41e-13!102;UBERON:0006601!1.41e-13!102;UBERON:0001017!3.02e-13!73;UBERON:0005743!3.02e-13!73;UBERON:0000073!1.44e-12!75;UBERON:0001016!1.44e-12!75;UBERON:0002346!5.82e-12!71;UBERON:0003075!5.82e-12!71;UBERON:0007284!5.82e-12!71;UBERON:0002020!1.15e-11!34;UBERON:0003056!2.79e-10!49;UBERON:0003080!3.06e-10!40;UBERON:0000475!5.39e-10!200;UBERON:0002780!9.39e-10!39;UBERON:0001890!9.39e-10!39;UBERON:0006240!9.39e-10!39;UBERON:0002791!9.90e-10!29;UBERON:0003528!9.90e-10!29;UBERON:0001893!9.90e-10!29;UBERON:0004111!3.67e-08!122;UBERON:0002021!9.15e-08!10;UBERON:0000411!9.15e-08!10;UBERON:0001950!9.15e-08!10;UBERON:0002619!1.69e-07!17;UBERON:0000025!1.88e-07!114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.28e-16,54;UBERON:0001049,2.89e-15,52;UBERON:0005068,2.89e-15,52;UBERON:0006241,2.89e-15,52;UBERON:0007135,2.89e-15,52;UBERON:0004121,2.02e-14,95;UBERON:0000924,2.02e-14,95;UBERON:0006601,2.02e-14,95;UBERON:0010371,4.93e-14,73;UBERON:0000955,2.56e-13,47;UBERON:0006238,2.56e-13,47;UBERON:0001017,2.98e-13,73;UBERON:0002346,3.88e-13,64;UBERON:0003075,3.88e-13,64;UBERON:0007284,3.88e-13,64;UBERON:0002616,8.90e-13,46;UBERON:0001016,1.42e-12,75;UBERON:0002020,1.13e-11,34;UBERON:0003056,2.76e-10,49;UBERON:0003080,3.03e-10,40;UBERON:0002780,9.31e-10,39;UBERON:0001890,9.31e-10,39;UBERON:0006240,9.31e-10,39;UBERON:0003528,9.81e-10,29;UBERON:0002791,9.81e-10,29;UBERON:0001893,9.81e-10,29;UBERON:0004111,3.99e-08,122;UBERON:0010314,4.63e-08,92;UBERON:0002021,9.09e-08,10;UBERON:0000411,9.09e-08,10;UBERON:0001950,9.09e-08,10;UBERON:0002619,1.68e-07,17;UBERON:0000025,2.04e-07,114 | |||
|phase1_expression=7.68714466103011,0.348975407639361,0.454999239389536,0.30246421130683,0,1.34303417529512,2.56973904655078,0.129123323441576,0,0,0,0,0,0,5.99597571268193,5.06188168474565,4.19737126876888,9.62159604342625,10.4206969540361,9.33657233955666,31.4660173558958,6.15603897445489,7.31359409589019,14.0793332058198,11.6998733344257,1.14846392823004,1.7230479846363,2.15471232685889,0.380046838912748,0.504060259519861,6.65191531965914,0,0,0,0,0.664938581433969,0,67.802124179379,60.9441568728564,43.9759944937991,94.1170380849623,90.8450494994733,66.514918365268,22.031943145726,21.2891555560981,15.9685674380663,15.6478268869608,42.7329306505675,48.5506463843183,54.4403717407993,29.8171078062022,35.9381410912429,1.51004345451963,0.725362142011344,0.672187598284928,4.88792928468299,10.601737277734,5.67239301505187,14.1621522601718,25.3915670050576,11.4089652631112,7.79342423759004,6.22506357277798,197.977937801908,206.673069776498,186.145790115878,137.216850617429,141.008118053011,6.53244557543409,10.1254453748768,6.94072372459561,31.7072592688222,36.001572175113,10.1667363348412,8.62609239164127,5.51531271966013,71.5753226496027,74.3140307655792,69.2765464985658,20.5742608859102,23.4208367622169,16.6692278578163,54.999050803272,85.5399167248154,76.7047203839587,34.7661730858928,37.8708670925614,24.6047268489397,2.49896437999507,10.7311615351635,72.1762576867178,7.74381489283248,0,1.07940638327563,0.649776417447669,0.896053774194671,13.0613310722529,19.5994870964766,18.4448063268037,16.606960001986,14.7885590765515,33.3648841277226,45.8649431471962,56.8853362522665,1.08245520505607,2.78695852022608,1.51657333504435,10.7332846935916,42.9836886854305,16.92240385339,6.59244241711316,7.00270600117925,7.37969591219387,9.3448037142626,9.28950786372068,12.3153259503082,6.17987419335935,12.8693427658721,28.307537662396,13.426648545635,11.9254419968613,9.69750506270444,0,127.359646700023,119.594069590483,3.57639877292028,11.5022519525683,8.39863823390771,13.2153036155987,84.7815019031297,112.087647690563,32.6701315493447,165.654577143239,154.45213622752,69.6089949274526,93.4509675270284,15.2759045775474,15.6752782968717,5.55990068554084,14.3100462002802,8.32770834961304,5.74755261083682,9.72335500948886,11.6042709733501,13.8794458268709,16.0142150356062,18.646643187386,41.6512426889815,2.37124792226126,6.24050064553804,9.32540958068929,6.79506770525482,11.3999372182495,14.626590993931,15.6394423670037,6.36909653819178,13.3420505589515,10.2939162845886,15.0606654679664,2.27838349789052,7.03578179943289,5.22179978236943,8.75955521665278,5.3126342571799,5.39934895105824,4.65067889500816,7.51165523918934,4.43708300995244,9.05079174524142,8.70087559619205,10.701082860053,13.3041988557052,15.8076083009556,12.7496097822353,114.187442070321,22.6390147234426,0,2.11560453330835,6.18535926552179,5.57368012465052,6.18563814346048,5.84882221407693,3.7804267453628,4.94586627892654,4.2707615539006,4.28217282282428,5.7807098024062,6.16765063327568,6.43381487493096,11.6846523125049,6.05186539649144,3.38540164532424,8.53505554288868,8.22589290790047,3.38123207019241,9.57161240872977,8.33995694820791,10.1696938840962,23.3975187359752,24.6508947125936,21.5088257142683,20.2371348831753,5.63259991465583,5.17219827719892,7.27268281918851,8.31989815823959,4.66578279193557,10.1294407096015,6.62027214631691,13.2340223227373,7.62035565842666,9.06052663520669,14.3768206527355,15.6299198020771,20.2824487524464,13.639259409144,8.43167843552987,10.6137574699941,16.9972934953276,6.44270800019648,7.98528384565927,6.28056817368196,6.10194645550105,3.01511263395268,6.9032655856944,9.75668239288994,21.5960147425482,15.723992965063,19.7723913135284,19.0081445070256,24.866637388689,18.370430439852,274.440136769475,357.889939952711,10.3270497333998,12.6930903300177,43.0275581167282,44.423229218445,17.0492343191742,7.57412781613119,2.83957397474631,3.51394869866975,4.52389135238878,5.25731355495614,3.7875774594007,2.54768877709949,6.47697122679831,4.09158201075837,1.97643888973262,104.750749153509,17.7425106510336,15.313641915384,15.6371480979433,29.5296520120838,11.9470624505967,11.4106898992841,7.55808892411878,8.29862350925952,15.0603965369194,11.3751004739253,11.62927319257,13.4507479906677,13.9033977570041,11.3773232856894,15.8127912862498,13.4076206222643,17.3624198934432,8.46287141947158,9.05510786479281,8.14480733120051,10.1083933176096,13.5560301377574,10.6956863391379,13.700922710157,12.9069439435041,3.60114520468494,7.05690873775878,17.9726015706213,20.50598219038,17.3701223793089,11.8178620563105,15.9216672752709,5.24665505933731,45.4291989925749,22.2132145037208,24.9728110235499,20.1862034832986,7.72310673719233,10.2520670790769,11.8964650067392,5.77926661979108,8.6769900440668,7.87739850685216,4.77335309007557,7.90839983952838,7.31950081656655,9.72048067396211,7.94535524854981,7.20596460362386,9.03591120778299,11.075563067195,9.6849698534091,3.75883422546199,21.1255366449555,0,6.57872802593507,7.44563207056939,6.80579159204167,7.8787492321416,9.46154302748358,6.80671984145373,5.33837977860195,2.83120229949419,0.724752362478018,0.864090018773596,7.90027801570446,11.5553372715394,11.91447103112,7.01572444080093,5.01274747868948,3.57626438606277,5.16840432935866,2.95379054349154,3.02899349844443,3.12447907285499,2.82313318383153,5.16526767920688,2.69393156592922,2.92192255453922,13.3770926332975,0.443971906748129,0.179427713218951,0.167884616364078,10.0458588896739,21.3958022014347,20.1466786693992,24.6523635940926,28.5896099300157,160.954275145864,157.431230885454,178.743400193092,201.240076524458,149.34798931,162.409687938786,157.280242554011,136.447324576939,142.739858830024,134.617681055473,1.86817225651518,7.18244772121856,6.31714341290296,9.72426868273176,5.03071590307158,4.77993121970037,10.0011027510727,7.82933217507798,13.1576875932644,9.34979683526051,9.12525479604863,10.3744487762342,9.17686773204848,10.1159740799693,10.2235134740992,10.0021675169445,10.6613579869267,10.6100071255038,11.1263193216893,7.80154276712306,7.20025430009372,8.87379030796687,11.6833733074187,10.0289027476307,8.94039113945641,10.2383675548929,9.87811053512972,11.3119975918272,12.0865661322817,8.41713407486608,11.1516917036724,11.5250244379409,6.95692773388472,10.2258315182738,11.1885834369062,18.9856039232839,11.462648813825,13.5368764050428,8.60797494309795,14.117850823649,10.434052602919 | |phase1_expression=7.68714466103011,0.348975407639361,0.454999239389536,0.30246421130683,0,1.34303417529512,2.56973904655078,0.129123323441576,0,0,0,0,0,0,5.99597571268193,5.06188168474565,4.19737126876888,9.62159604342625,10.4206969540361,9.33657233955666,31.4660173558958,6.15603897445489,7.31359409589019,14.0793332058198,11.6998733344257,1.14846392823004,1.7230479846363,2.15471232685889,0.380046838912748,0.504060259519861,6.65191531965914,0,0,0,0,0.664938581433969,0,67.802124179379,60.9441568728564,43.9759944937991,94.1170380849623,90.8450494994733,66.514918365268,22.031943145726,21.2891555560981,15.9685674380663,15.6478268869608,42.7329306505675,48.5506463843183,54.4403717407993,29.8171078062022,35.9381410912429,1.51004345451963,0.725362142011344,0.672187598284928,4.88792928468299,10.601737277734,5.67239301505187,14.1621522601718,25.3915670050576,11.4089652631112,7.79342423759004,6.22506357277798,197.977937801908,206.673069776498,186.145790115878,137.216850617429,141.008118053011,6.53244557543409,10.1254453748768,6.94072372459561,31.7072592688222,36.001572175113,10.1667363348412,8.62609239164127,5.51531271966013,71.5753226496027,74.3140307655792,69.2765464985658,20.5742608859102,23.4208367622169,16.6692278578163,54.999050803272,85.5399167248154,76.7047203839587,34.7661730858928,37.8708670925614,24.6047268489397,2.49896437999507,10.7311615351635,72.1762576867178,7.74381489283248,0,1.07940638327563,0.649776417447669,0.896053774194671,13.0613310722529,19.5994870964766,18.4448063268037,16.606960001986,14.7885590765515,33.3648841277226,45.8649431471962,56.8853362522665,1.08245520505607,2.78695852022608,1.51657333504435,10.7332846935916,42.9836886854305,16.92240385339,6.59244241711316,7.00270600117925,7.37969591219387,9.3448037142626,9.28950786372068,12.3153259503082,6.17987419335935,12.8693427658721,28.307537662396,13.426648545635,11.9254419968613,9.69750506270444,0,127.359646700023,119.594069590483,3.57639877292028,11.5022519525683,8.39863823390771,13.2153036155987,84.7815019031297,112.087647690563,32.6701315493447,165.654577143239,154.45213622752,69.6089949274526,93.4509675270284,15.2759045775474,15.6752782968717,5.55990068554084,14.3100462002802,8.32770834961304,5.74755261083682,9.72335500948886,11.6042709733501,13.8794458268709,16.0142150356062,18.646643187386,41.6512426889815,2.37124792226126,6.24050064553804,9.32540958068929,6.79506770525482,11.3999372182495,14.626590993931,15.6394423670037,6.36909653819178,13.3420505589515,10.2939162845886,15.0606654679664,2.27838349789052,7.03578179943289,5.22179978236943,8.75955521665278,5.3126342571799,5.39934895105824,4.65067889500816,7.51165523918934,4.43708300995244,9.05079174524142,8.70087559619205,10.701082860053,13.3041988557052,15.8076083009556,12.7496097822353,114.187442070321,22.6390147234426,0,2.11560453330835,6.18535926552179,5.57368012465052,6.18563814346048,5.84882221407693,3.7804267453628,4.94586627892654,4.2707615539006,4.28217282282428,5.7807098024062,6.16765063327568,6.43381487493096,11.6846523125049,6.05186539649144,3.38540164532424,8.53505554288868,8.22589290790047,3.38123207019241,9.57161240872977,8.33995694820791,10.1696938840962,23.3975187359752,24.6508947125936,21.5088257142683,20.2371348831753,5.63259991465583,5.17219827719892,7.27268281918851,8.31989815823959,4.66578279193557,10.1294407096015,6.62027214631691,13.2340223227373,7.62035565842666,9.06052663520669,14.3768206527355,15.6299198020771,20.2824487524464,13.639259409144,8.43167843552987,10.6137574699941,16.9972934953276,6.44270800019648,7.98528384565927,6.28056817368196,6.10194645550105,3.01511263395268,6.9032655856944,9.75668239288994,21.5960147425482,15.723992965063,19.7723913135284,19.0081445070256,24.866637388689,18.370430439852,274.440136769475,357.889939952711,10.3270497333998,12.6930903300177,43.0275581167282,44.423229218445,17.0492343191742,7.57412781613119,2.83957397474631,3.51394869866975,4.52389135238878,5.25731355495614,3.7875774594007,2.54768877709949,6.47697122679831,4.09158201075837,1.97643888973262,104.750749153509,17.7425106510336,15.313641915384,15.6371480979433,29.5296520120838,11.9470624505967,11.4106898992841,7.55808892411878,8.29862350925952,15.0603965369194,11.3751004739253,11.62927319257,13.4507479906677,13.9033977570041,11.3773232856894,15.8127912862498,13.4076206222643,17.3624198934432,8.46287141947158,9.05510786479281,8.14480733120051,10.1083933176096,13.5560301377574,10.6956863391379,13.700922710157,12.9069439435041,3.60114520468494,7.05690873775878,17.9726015706213,20.50598219038,17.3701223793089,11.8178620563105,15.9216672752709,5.24665505933731,45.4291989925749,22.2132145037208,24.9728110235499,20.1862034832986,7.72310673719233,10.2520670790769,11.8964650067392,5.77926661979108,8.6769900440668,7.87739850685216,4.77335309007557,7.90839983952838,7.31950081656655,9.72048067396211,7.94535524854981,7.20596460362386,9.03591120778299,11.075563067195,9.6849698534091,3.75883422546199,21.1255366449555,0,6.57872802593507,7.44563207056939,6.80579159204167,7.8787492321416,9.46154302748358,6.80671984145373,5.33837977860195,2.83120229949419,0.724752362478018,0.864090018773596,7.90027801570446,11.5553372715394,11.91447103112,7.01572444080093,5.01274747868948,3.57626438606277,5.16840432935866,2.95379054349154,3.02899349844443,3.12447907285499,2.82313318383153,5.16526767920688,2.69393156592922,2.92192255453922,13.3770926332975,0.443971906748129,0.179427713218951,0.167884616364078,10.0458588896739,21.3958022014347,20.1466786693992,24.6523635940926,28.5896099300157,160.954275145864,157.431230885454,178.743400193092,201.240076524458,149.34798931,162.409687938786,157.280242554011,136.447324576939,142.739858830024,134.617681055473,1.86817225651518,7.18244772121856,6.31714341290296,9.72426868273176,5.03071590307158,4.77993121970037,10.0011027510727,7.82933217507798,13.1576875932644,9.34979683526051,9.12525479604863,10.3744487762342,9.17686773204848,10.1159740799693,10.2235134740992,10.0021675169445,10.6613579869267,10.6100071255038,11.1263193216893,7.80154276712306,7.20025430009372,8.87379030796687,11.6833733074187,10.0289027476307,8.94039113945641,10.2383675548929,9.87811053512972,11.3119975918272,12.0865661322817,8.41713407486608,11.1516917036724,11.5250244379409,6.95692773388472,10.2258315182738,11.1885834369062,18.9856039232839,11.462648813825,13.5368764050428,8.60797494309795,14.117850823649,10.434052602919 | ||
|short_description=p2@Sirpa | |short_description=p2@Sirpa | ||
}} | }} |
Latest revision as of 17:26, 25 September 2015
Short description: | p2@Sirpa |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Sirpa_5end |
Coexpression cluster: | MCL_coexpression_mm9:799 |
Association with transcript: | 0bp_to_ENSMUST00000049262, ENSMUST00000160952, ENSMUST00000163034_5end |
EntrezGene: | Sirpa |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
regional part of nervous system | 2.28e-16 | 54 |
neural tube | 2.89e-15 | 52 |
neural rod | 2.89e-15 | 52 |
future spinal cord | 2.89e-15 | 52 |
neural keel | 2.89e-15 | 52 |
ectoderm-derived structure | 2.02e-14 | 95 |
ectoderm | 2.02e-14 | 95 |
presumptive ectoderm | 2.02e-14 | 95 |
ecto-epithelium | 4.93e-14 | 73 |
brain | 2.56e-13 | 47 |
future brain | 2.56e-13 | 47 |
central nervous system | 2.98e-13 | 73 |
neurectoderm | 3.88e-13 | 64 |
neural plate | 3.88e-13 | 64 |
presumptive neural plate | 3.88e-13 | 64 |
regional part of brain | 8.90e-13 | 46 |
nervous system | 1.42e-12 | 75 |
gray matter | 1.13e-11 | 34 |
pre-chordal neural plate | 2.76e-10 | 49 |
anterior neural tube | 3.03e-10 | 40 |
regional part of forebrain | 9.31e-10 | 39 |
forebrain | 9.31e-10 | 39 |
future forebrain | 9.31e-10 | 39 |
brain grey matter | 9.81e-10 | 29 |
regional part of telencephalon | 9.81e-10 | 29 |
telencephalon | 9.81e-10 | 29 |
anatomical conduit | 3.99e-08 | 122 |
structure with developmental contribution from neural crest | 4.63e-08 | 92 |
occipital lobe | 9.09e-08 | 10 |
visual cortex | 9.09e-08 | 10 |
neocortex | 9.09e-08 | 10 |
regional part of cerebral cortex | 1.68e-07 | 17 |
tube | 2.04e-07 | 114 |