FFCP PHASE1:Mm9::chr3:88991397..88991410,+: Difference between revisions
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{{FFCP|EntrezGene=68521|HGNC=|MCL_coexpression_id=33|UniProt=|association_with_transcript=99bp_to_ENSMUST00000136209_5end|description=CAGE_peak_10_at_Fam189b_5end|id=chr3:88991397..88991410,+|ontology_enrichment_celltype=CL:0002031!2.11e-08!25;CL:0000553!7.06e-08!6;CL:0000556!7.06e-08!6;CL:0000838!7.72e-07!12|ontology_enrichment_celltype_v019_2=CL:0000815,3.50e-08,1;CL:0000792,3.50e-08,1;CL:0000624,4.22e-08,8;CL:0000791,2.94e-07,9;CL:0000789,2.94e-07,9;CL:0002420,2.94e-07,9;CL:0002419,2.94e-07,9;CL:0000790,2.94e-07,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002193!4.94e-20!48;UBERON:0002370!2.11e-19!23;UBERON:0000974!2.11e-19!23;UBERON:0004807!2.11e-19!23;UBERON:0005058!2.11e-19!23;UBERON:0003351!2.11e-19!23;UBERON:0009113!2.11e-19!23;UBERON:0003295!2.11e-19!23;UBERON:0009722!2.11e-19!23;UBERON:0005562!2.11e-19!23;UBERON:0007690!2.11e-19!23;UBERON:0004177!1.23e-18!29;UBERON:0006562!2.08e-18!24;UBERON:0003408!2.08e-18!24;UBERON:0001557!2.08e-18!24;UBERON:0001042!2.08e-18!24;UBERON:0008814!2.08e-18!24;UBERON:0009145!2.08e-18!24;UBERON:0002390!4.13e-18!45;UBERON:0003061!4.13e-18!45;UBERON:0000072!7.13e-16!27;UBERON:0002405!2.20e-15!70;UBERON:0000063!4.98e-13!35;UBERON:0005057!3.30e-12!51;UBERON:0003081!1.97e-10!88;UBERON:0002368!1.67e-09!60;UBERON:0000065!5.22e-09!41;UBERON:0001004!1.07e-08!42;UBERON:0003929!1.38e-08!55;UBERON:0002530!2.31e-08!65;UBERON:0000490!5.59e-08!66;UBERON:0000949!4.77e-07!72|ontology_enrichment_uberon_v019_2=UBERON:0002370,1.60e-34,23;UBERON:0000974,1.60e-34,23;UBERON:0004807,1.60e-34,23;UBERON:0005058,1.60e-34,23;UBERON:0003351,1.60e-34,23;UBERON:0009113,1.60e-34,23;UBERON:0003295,1.60e-34,23;UBERON:0009722,1.60e-34,23;UBERON:0005562,1.60e-34,23;UBERON:0007690,1.60e-34,23;UBERON:0006562,4.76e-33,24;UBERON:0003408,4.76e-33,24;UBERON:0001557,4.76e-33,24;UBERON:0001042,4.76e-33,24;UBERON:0008814,4.76e-33,24;UBERON:0009145,4.76e-33,24;UBERON:0000072,2.80e-29,27;UBERON:0004177,3.37e-27,29;UBERON:0005057,3.37e-27,29;UBERON:0000077,2.24e-22,35;UBERON:0007811,9.97e-22,36;UBERON:0000065,5.86e-19,41;UBERON:0001004,1.75e-18,42;UBERON:0000153,4.97e-18,43;UBERON:0002390,3.49e-17,45;UBERON:0003061,3.49e-17,45;UBERON:0002193,4.79e-16,48;UBERON:0002405,4.79e-16,48;UBERON:0003929,7.20e-14,55;UBERON:0002368,1.27e-12,60;UBERON:0002530,1.45e-11,65;UBERON:0000490,2.25e-11,66;UBERON:0005911,7.87e-11,69;UBERON:0000949,2.48e-10,72;UBERON:0001041,3.51e-09,80;UBERON:0003081,2.40e-08,87;UBERON:0001153,2.98e-08,1;UBERON:0001045,2.98e-08,1;UBERON:0004921,2.05e-07,114;UBERON:0001007,2.91e-07,116;UBERON:0001555,2.91e-07,116;UBERON:0007026,2.91e-07,116;UBERON:0004119,4.07e-07,118;UBERON:0000925,4.07e-07,118;UBERON:0006595,4.07e-07,118|phase1_expression=0,0,0,0,0,0,0,1.80772652818207,0,0.234064526321993,0,0,1.36960583944965,1.31130603628496,0.666219523631325,0.202475267389826,0,0.788655413395594,0.548457734422955,0.42438965179803,0,0.0992909512008853,0,0,0.45881856213434,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0.101376931219515,0,0,0,0,0,0,0,0.335565212115473,0,0.336093799142464,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103689612308478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142371680799103,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258937883647172,0,0,0.304465478312141,0,0,0,0,0,0,0,0,0.220841518460394,0,1.86391761218122,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278047249225598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210289948564127,0,0,0,0,0,0,0.201683524623343,0,0,0.949058123089023,0,0,0,0,0,0,0,0,0,0,0,0.193952487167626,0,0,0,0,0,0,0,0,0.224862112384854,0,0,0,0,0.486405680325106,0,0,0.372140947668503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.370389054739423,0.376736914009382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.89606672376907,0,0.102710957164827,0.25984164595559,0.716106782669926,2.18549490259391,0.721172697119813,1.18151621739662,1.51449674922221,2.209997392995,1.41156659191577,1.65678397257579,1.25075394132428,2.80504565235765,0,0,0.0897138566094757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.342869252385415,0,0,0,0,0,0.182927972872773,0.263069711437843,0,0,0,0,0,0,0,0,0,0,0.191288332068843,0,0|short_description=p10@Fam189b}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=68521 | |||
|HGNC= | |||
|MCL_coexpression_id=33 | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=99bp_to_ENSMUST00000136209_5end | |||
|cluster_id=chr3:88991397..88991410,+ | |||
|description=CAGE_peak_10_at_Fam189b_5end | |||
|id=chr3:88991397..88991410,+ | |||
|ontology_enrichment_celltype=CL:0002031!2.11e-08!25;CL:0000553!7.06e-08!6;CL:0000556!7.06e-08!6;CL:0000838!7.72e-07!12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000815,3.50e-08,1;CL:0000792,3.50e-08,1;CL:0000624,4.22e-08,8;CL:0000791,2.94e-07,9;CL:0000789,2.94e-07,9;CL:0002420,2.94e-07,9;CL:0002419,2.94e-07,9;CL:0000790,2.94e-07,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!4.94e-20!48;UBERON:0002370!2.11e-19!23;UBERON:0000974!2.11e-19!23;UBERON:0004807!2.11e-19!23;UBERON:0005058!2.11e-19!23;UBERON:0003351!2.11e-19!23;UBERON:0009113!2.11e-19!23;UBERON:0003295!2.11e-19!23;UBERON:0009722!2.11e-19!23;UBERON:0005562!2.11e-19!23;UBERON:0007690!2.11e-19!23;UBERON:0004177!1.23e-18!29;UBERON:0006562!2.08e-18!24;UBERON:0003408!2.08e-18!24;UBERON:0001557!2.08e-18!24;UBERON:0001042!2.08e-18!24;UBERON:0008814!2.08e-18!24;UBERON:0009145!2.08e-18!24;UBERON:0002390!4.13e-18!45;UBERON:0003061!4.13e-18!45;UBERON:0000072!7.13e-16!27;UBERON:0002405!2.20e-15!70;UBERON:0000063!4.98e-13!35;UBERON:0005057!3.30e-12!51;UBERON:0003081!1.97e-10!88;UBERON:0002368!1.67e-09!60;UBERON:0000065!5.22e-09!41;UBERON:0001004!1.07e-08!42;UBERON:0003929!1.38e-08!55;UBERON:0002530!2.31e-08!65;UBERON:0000490!5.59e-08!66;UBERON:0000949!4.77e-07!72 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,1.60e-34,23;UBERON:0000974,1.60e-34,23;UBERON:0004807,1.60e-34,23;UBERON:0005058,1.60e-34,23;UBERON:0003351,1.60e-34,23;UBERON:0009113,1.60e-34,23;UBERON:0003295,1.60e-34,23;UBERON:0009722,1.60e-34,23;UBERON:0005562,1.60e-34,23;UBERON:0007690,1.60e-34,23;UBERON:0006562,4.76e-33,24;UBERON:0003408,4.76e-33,24;UBERON:0001557,4.76e-33,24;UBERON:0001042,4.76e-33,24;UBERON:0008814,4.76e-33,24;UBERON:0009145,4.76e-33,24;UBERON:0000072,2.80e-29,27;UBERON:0004177,3.37e-27,29;UBERON:0005057,3.37e-27,29;UBERON:0000077,2.24e-22,35;UBERON:0007811,9.97e-22,36;UBERON:0000065,5.86e-19,41;UBERON:0001004,1.75e-18,42;UBERON:0000153,4.97e-18,43;UBERON:0002390,3.49e-17,45;UBERON:0003061,3.49e-17,45;UBERON:0002193,4.79e-16,48;UBERON:0002405,4.79e-16,48;UBERON:0003929,7.20e-14,55;UBERON:0002368,1.27e-12,60;UBERON:0002530,1.45e-11,65;UBERON:0000490,2.25e-11,66;UBERON:0005911,7.87e-11,69;UBERON:0000949,2.48e-10,72;UBERON:0001041,3.51e-09,80;UBERON:0003081,2.40e-08,87;UBERON:0001153,2.98e-08,1;UBERON:0001045,2.98e-08,1;UBERON:0004921,2.05e-07,114;UBERON:0001007,2.91e-07,116;UBERON:0001555,2.91e-07,116;UBERON:0007026,2.91e-07,116;UBERON:0004119,4.07e-07,118;UBERON:0000925,4.07e-07,118;UBERON:0006595,4.07e-07,118 | |||
|phase1_expression=0,0,0,0,0,0,0,1.80772652818207,0,0.234064526321993,0,0,1.36960583944965,1.31130603628496,0.666219523631325,0.202475267389826,0,0.788655413395594,0.548457734422955,0.42438965179803,0,0.0992909512008853,0,0,0.45881856213434,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0.101376931219515,0,0,0,0,0,0,0,0.335565212115473,0,0.336093799142464,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103689612308478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142371680799103,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258937883647172,0,0,0.304465478312141,0,0,0,0,0,0,0,0,0.220841518460394,0,1.86391761218122,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278047249225598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210289948564127,0,0,0,0,0,0,0.201683524623343,0,0,0.949058123089023,0,0,0,0,0,0,0,0,0,0,0,0.193952487167626,0,0,0,0,0,0,0,0,0.224862112384854,0,0,0,0,0.486405680325106,0,0,0.372140947668503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.370389054739423,0.376736914009382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.89606672376907,0,0.102710957164827,0.25984164595559,0.716106782669926,2.18549490259391,0.721172697119813,1.18151621739662,1.51449674922221,2.209997392995,1.41156659191577,1.65678397257579,1.25075394132428,2.80504565235765,0,0,0.0897138566094757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.342869252385415,0,0,0,0,0,0.182927972872773,0.263069711437843,0,0,0,0,0,0,0,0,0,0,0.191288332068843,0,0 | |||
|short_description=p10@Fam189b | |||
}} |
Latest revision as of 20:20, 25 September 2015
Short description: | p10@Fam189b |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_10_at_Fam189b_5end |
Coexpression cluster: | MCL_coexpression_mm9:33 |
Association with transcript: | 99bp_to_ENSMUST00000136209_5end |
EntrezGene: | Fam189b |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
regulatory T cell | 3.50e-08 | 1 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 3.50e-08 | 1 |
CD4-positive, alpha-beta T cell | 4.22e-08 | 8 |
mature alpha-beta T cell | 2.94e-07 | 9 |
alpha-beta T cell | 2.94e-07 | 9 |
immature T cell | 2.94e-07 | 9 |
mature T cell | 2.94e-07 | 9 |
immature alpha-beta T cell | 2.94e-07 | 9 |