FFCP PHASE1:Mm9::chr16:92826249..92826325,-: Difference between revisions
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{{FFCP|EntrezGene=12394|HGNC=|MCL_coexpression_id=36|UniProt=Q3UM65,E9Q3L8,Q03347|association_with_transcript=0bp_to_ENSMUST00000023673,ENSMUST00000113957,NM_001111021,NM_001111022,uc007zzj.2,uc007zzk.2_5end|description=CAGE_peak_1_at_Runx1_5end|id=chr16:92826249..92826325,-|ontology_enrichment_celltype=CL:0000988!5.80e-14!32;CL:0002032!5.80e-14!32;CL:0000037!5.80e-14!32;CL:0000566!5.80e-14!32;CL:0000837!5.80e-14!32;CL:0002031!1.07e-11!25;CL:0000049!1.28e-08!19;CL:0002320!4.61e-08!46;CL:0000134!4.61e-08!46;CL:0000738!1.16e-07!17;CL:0002087!1.16e-07!17;CL:0000838!2.49e-07!12;CL:0000763!3.93e-07!16;CL:0000084!8.97e-07!11;CL:0000827!8.97e-07!11|ontology_enrichment_celltype_v019_2=CL:0000988,1.26e-14,32;CL:0002032,1.26e-14,32;CL:0000037,1.26e-14,32;CL:0000837,1.26e-14,32;CL:0002031,1.89e-12,25;CL:0000049,3.82e-09,19;CL:0002320,5.24e-09,46;CL:0000134,5.24e-09,46;CL:0000738,7.18e-08,17;CL:0002087,7.18e-08,17;CL:0000838,9.22e-08,12;CL:0000763,1.51e-07,16;CL:0000084,3.65e-07,11;CL:0000827,3.65e-07,11|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002390!3.15e-20!45;UBERON:0003061!3.15e-20!45;UBERON:0002193!7.17e-20!48;UBERON:0002405!1.03e-17!70;UBERON:0004177!3.66e-13!29;UBERON:0005057!6.51e-11!51;UBERON:0003408!8.75e-11!24;UBERON:0003081!1.37e-10!88;UBERON:0002370!1.46e-10!23;UBERON:0000974!1.46e-10!23;UBERON:0004807!1.46e-10!23;UBERON:0005058!1.46e-10!23;UBERON:0003351!1.46e-10!23;UBERON:0009113!1.46e-10!23;UBERON:0003295!1.46e-10!23;UBERON:0009722!1.46e-10!23;UBERON:0005562!1.46e-10!23;UBERON:0007690!1.46e-10!23;UBERON:0006562!6.54e-10!24;UBERON:0001557!6.54e-10!24;UBERON:0001042!6.54e-10!24;UBERON:0008814!6.54e-10!24;UBERON:0009145!6.54e-10!24;UBERON:0002384!4.61e-08!46;UBERON:0002371!8.48e-08!16;UBERON:0001474!3.34e-07!22;UBERON:0004765!3.34e-07!22;UBERON:0001434!3.34e-07!22;UBERON:0000072!5.85e-07!27;UBERON:0001041!6.37e-07!92;UBERON:0000926!8.81e-07!193;UBERON:0004120!8.81e-07!193;UBERON:0006603!8.81e-07!193;UBERON:0001004!8.85e-07!42|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.90e-22,45;UBERON:0003061,2.90e-22,45;UBERON:0002193,1.55e-21,48;UBERON:0002405,1.55e-21,48;UBERON:0004177,1.20e-14,29;UBERON:0005057,1.20e-14,29;UBERON:0003408,4.43e-12,24;UBERON:0002370,7.57e-12,23;UBERON:0000974,7.57e-12,23;UBERON:0004807,7.57e-12,23;UBERON:0005058,7.57e-12,23;UBERON:0003351,7.57e-12,23;UBERON:0009113,7.57e-12,23;UBERON:0003295,7.57e-12,23;UBERON:0009722,7.57e-12,23;UBERON:0005562,7.57e-12,23;UBERON:0007690,7.57e-12,23;UBERON:0000077,2.12e-11,35;UBERON:0003081,6.55e-11,87;UBERON:0006562,8.11e-11,24;UBERON:0001557,8.11e-11,24;UBERON:0001042,8.11e-11,24;UBERON:0008814,8.11e-11,24;UBERON:0009145,8.11e-11,24;UBERON:0002384,5.24e-09,46;UBERON:0000072,2.85e-08,27;UBERON:0002371,2.90e-08,16;UBERON:0001474,5.71e-08,22;UBERON:0004765,5.71e-08,22;UBERON:0001434,5.71e-08,22;UBERON:0001041,9.88e-08,80;UBERON:0000926,1.21e-07,120;UBERON:0004120,1.21e-07,120;UBERON:0006603,1.21e-07,120;UBERON:0001004,1.64e-07,42;UBERON:0000065,2.93e-07,41|phase1_expression=0.160148847104794,0,0,0,0,4.36486106970913,2.56973904655078,104.07339869391,143.6044965947,172.973684951953,26.3675671067278,15.1567102091139,90.5651861336078,116.531396424524,28.647439516147,39.6851524084059,26.5833513688696,79.3387345875968,91.7295560822392,71.7218511538671,8.24919914465377,14.695060777731,15.9331871374751,1.27993938234725,0.68822784320151,0,0.86152399231815,0.430942465371778,0.380046838912748,0,0.443461021310609,4.44521471421742,4.30545351309199,15.8481681015439,0.577703239502549,0.498703936075477,0.204169356262369,79.1024782092756,42.973443948809,83.2402752918339,99.4111214772414,81.9654581950135,65.0583873061746,0,0,0,0,0,1.09843091367236,0.194429899074283,0,0,88.0858681803116,109.529683443713,34.9537551108163,0,0.286533439938757,0,0.202316460859598,0,0,0,0,24.2972923665978,49.4433181283487,41.2078466668738,6.89080254192331,3.45796474789399,0,0,0.210324961351382,0.571301968807607,0.662605622854841,0.244981598429908,0,0,1.10115880999389,0.127687338085188,0.921639199537461,0.263772575460388,0.0914876436024097,0,0,1.12552522006336,0.30559649555362,1.76777151284201,0.427115042397309,0,1.66597625333005,0,0.579728977403356,0,0.679971333707751,0,0,0,7.44355426698285,2.89731548382698,1.29893002301434,0.70667914902068,0,3.84979432242953,0,0,0,0,0,10.0481814152773,119.888240128641,1.7813056687779,2.60227990149204,1.21786191324856,0.922461989024234,0.904335843315735,1.17588707135705,0.376999773989026,0.247194967734374,5.78397427679647,48.6535803572431,6.30890714794896,31.3594956213759,33.4563924663303,5.59175283654366,0,0,1.53274233125155,81.5940997885317,52.1915375964265,80.6895941913961,0.599162557619291,1.37250180845588,0,1.21677024134594,0.511430914660661,0.20778804455956,0.648965052271031,1.12023300235348,32.7190332704545,4.0435641349388,1.47309299120532,0.390361328888111,0.229902104433473,0.180062129805349,1.05493372485001,0.272145996605311,0.2562274405697,0.0937017245597288,1.03481348295606,0.64670397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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=12394 | |||
|HGNC= | |||
|MCL_coexpression_id=36 | |||
|TSSclassifier=NA | |||
|UniProt=Q3UM65,E9Q3L8,Q03347 | |||
|association_with_transcript=0bp_to_ENSMUST00000023673,ENSMUST00000113957,NM_001111021,NM_001111022,uc007zzj.2,uc007zzk.2_5end | |||
|cluster_id=chr16:92826249..92826325,- | |||
|description=CAGE_peak_1_at_Runx1_5end | |||
|id=chr16:92826249..92826325,- | |||
|ontology_enrichment_celltype=CL:0000988!5.80e-14!32;CL:0002032!5.80e-14!32;CL:0000037!5.80e-14!32;CL:0000566!5.80e-14!32;CL:0000837!5.80e-14!32;CL:0002031!1.07e-11!25;CL:0000049!1.28e-08!19;CL:0002320!4.61e-08!46;CL:0000134!4.61e-08!46;CL:0000738!1.16e-07!17;CL:0002087!1.16e-07!17;CL:0000838!2.49e-07!12;CL:0000763!3.93e-07!16;CL:0000084!8.97e-07!11;CL:0000827!8.97e-07!11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,1.26e-14,32;CL:0002032,1.26e-14,32;CL:0000037,1.26e-14,32;CL:0000837,1.26e-14,32;CL:0002031,1.89e-12,25;CL:0000049,3.82e-09,19;CL:0002320,5.24e-09,46;CL:0000134,5.24e-09,46;CL:0000738,7.18e-08,17;CL:0002087,7.18e-08,17;CL:0000838,9.22e-08,12;CL:0000763,1.51e-07,16;CL:0000084,3.65e-07,11;CL:0000827,3.65e-07,11 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!3.15e-20!45;UBERON:0003061!3.15e-20!45;UBERON:0002193!7.17e-20!48;UBERON:0002405!1.03e-17!70;UBERON:0004177!3.66e-13!29;UBERON:0005057!6.51e-11!51;UBERON:0003408!8.75e-11!24;UBERON:0003081!1.37e-10!88;UBERON:0002370!1.46e-10!23;UBERON:0000974!1.46e-10!23;UBERON:0004807!1.46e-10!23;UBERON:0005058!1.46e-10!23;UBERON:0003351!1.46e-10!23;UBERON:0009113!1.46e-10!23;UBERON:0003295!1.46e-10!23;UBERON:0009722!1.46e-10!23;UBERON:0005562!1.46e-10!23;UBERON:0007690!1.46e-10!23;UBERON:0006562!6.54e-10!24;UBERON:0001557!6.54e-10!24;UBERON:0001042!6.54e-10!24;UBERON:0008814!6.54e-10!24;UBERON:0009145!6.54e-10!24;UBERON:0002384!4.61e-08!46;UBERON:0002371!8.48e-08!16;UBERON:0001474!3.34e-07!22;UBERON:0004765!3.34e-07!22;UBERON:0001434!3.34e-07!22;UBERON:0000072!5.85e-07!27;UBERON:0001041!6.37e-07!92;UBERON:0000926!8.81e-07!193;UBERON:0004120!8.81e-07!193;UBERON:0006603!8.81e-07!193;UBERON:0001004!8.85e-07!42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.90e-22,45;UBERON:0003061,2.90e-22,45;UBERON:0002193,1.55e-21,48;UBERON:0002405,1.55e-21,48;UBERON:0004177,1.20e-14,29;UBERON:0005057,1.20e-14,29;UBERON:0003408,4.43e-12,24;UBERON:0002370,7.57e-12,23;UBERON:0000974,7.57e-12,23;UBERON:0004807,7.57e-12,23;UBERON:0005058,7.57e-12,23;UBERON:0003351,7.57e-12,23;UBERON:0009113,7.57e-12,23;UBERON:0003295,7.57e-12,23;UBERON:0009722,7.57e-12,23;UBERON:0005562,7.57e-12,23;UBERON:0007690,7.57e-12,23;UBERON:0000077,2.12e-11,35;UBERON:0003081,6.55e-11,87;UBERON:0006562,8.11e-11,24;UBERON:0001557,8.11e-11,24;UBERON:0001042,8.11e-11,24;UBERON:0008814,8.11e-11,24;UBERON:0009145,8.11e-11,24;UBERON:0002384,5.24e-09,46;UBERON:0000072,2.85e-08,27;UBERON:0002371,2.90e-08,16;UBERON:0001474,5.71e-08,22;UBERON:0004765,5.71e-08,22;UBERON:0001434,5.71e-08,22;UBERON:0001041,9.88e-08,80;UBERON:0000926,1.21e-07,120;UBERON:0004120,1.21e-07,120;UBERON:0006603,1.21e-07,120;UBERON:0001004,1.64e-07,42;UBERON:0000065,2.93e-07,41 | |||
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| |||
|short_description=p1@Runx1 | |||
}} |
Latest revision as of 21:10, 25 September 2015
Short description: | p1@Runx1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Runx1_5end |
Coexpression cluster: | MCL_coexpression_mm9:36 |
Association with transcript: | 0bp_to_ENSMUST00000023673, ENSMUST00000113957, NM_001111021, NM_001111022, uc007zzj.2, uc007zzk.2_5end |
EntrezGene: | Runx1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 1.26e-14 | 32 |
hematopoietic oligopotent progenitor cell | 1.26e-14 | 32 |
hematopoietic stem cell | 1.26e-14 | 32 |
hematopoietic multipotent progenitor cell | 1.26e-14 | 32 |
hematopoietic lineage restricted progenitor cell | 1.89e-12 | 25 |
common myeloid progenitor | 3.82e-09 | 19 |
connective tissue cell | 5.24e-09 | 46 |
mesenchymal cell | 5.24e-09 | 46 |
leukocyte | 7.18e-08 | 17 |
nongranular leukocyte | 7.18e-08 | 17 |
lymphoid lineage restricted progenitor cell | 9.22e-08 | 12 |
myeloid cell | 1.51e-07 | 16 |
T cell | 3.65e-07 | 11 |
pro-T cell | 3.65e-07 | 11 |