FFCP PHASE1:Mm9::chr17:10512100..10512116,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=19317 | |EntrezGene=19317 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=2190 | |||
|TSSclassifier=NA | |||
|UniProt=F8WHX7,Q9QYS9 | |UniProt=F8WHX7,Q9QYS9 | ||
|association_with_transcript=109bp_to_ENSMUST00000042434,ENSMUST00000097414,ENSMUST00000115697,NM_001159516,NM_001159517,NM_021881,uc008akb.2,uc008akc.2,uc008ake.2,uc012ajv.1_5end | |association_with_transcript=109bp_to_ENSMUST00000042434,ENSMUST00000097414,ENSMUST00000115697,NM_001159516,NM_001159517,NM_021881,uc008akb.2,uc008akc.2,uc008ake.2,uc012ajv.1_5end | ||
|cluster_id=chr17:10512100..10512116,- | |||
|description=CAGE_peak_3_at_Qk_5end | |description=CAGE_peak_3_at_Qk_5end | ||
|id=chr17:10512100..10512116,- | |id=chr17:10512100..10512116,- | ||
|ontology_enrichment_celltype=CL:0000221!1.06e-09!44;CL:0000133!1.06e-09!44;CL:0002319!3.00e-09!43;CL:0000055!4.24e-08!50;CL:0000540!5.00e-07!33;CL:0000047!5.00e-07!33;CL:0000031!5.00e-07!33;CL:0000404!5.00e-07!33 | |ontology_enrichment_celltype=CL:0000221!1.06e-09!44;CL:0000133!1.06e-09!44;CL:0002319!3.00e-09!43;CL:0000055!4.24e-08!50;CL:0000540!5.00e-07!33;CL:0000047!5.00e-07!33;CL:0000031!5.00e-07!33;CL:0000404!5.00e-07!33 | ||
|ontology_enrichment_celltype_v019_2=CL:0000221,1.05e-09,44;CL:0000133,1.05e-09,44;CL:0002319,3.00e-09,43;CL:0000540,4.99e-07,33;CL:0000047,4.99e-07,33;CL:0000031,4.99e-07,33;CL:0000404,4.99e-07,33 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!1.08e-16!75;UBERON:0001016!1.08e-16!75;UBERON:0001017!1.29e-15!73;UBERON:0005743!1.29e-15!73;UBERON:0000025!1.32e-15!114;UBERON:0004111!3.12e-14!122;UBERON:0004121!4.56e-14!102;UBERON:0000924!4.56e-14!102;UBERON:0006601!4.56e-14!102;UBERON:0001049!5.47e-10!52;UBERON:0005068!5.47e-10!52;UBERON:0006241!5.47e-10!52;UBERON:0007135!5.47e-10!52;UBERON:0000955!1.50e-09!50;UBERON:0006238!1.50e-09!50;UBERON:0002020!1.73e-09!34;UBERON:0002616!4.20e-09!49;UBERON:0000033!4.87e-09!63;UBERON:0002346!5.75e-09!71;UBERON:0003075!5.75e-09!71;UBERON:0007284!5.75e-09!71;UBERON:0002791!1.62e-07!29;UBERON:0003528!1.62e-07!29;UBERON:0001893!1.62e-07!29;UBERON:0007100!1.74e-07!18;UBERON:0000948!1.74e-07!18;UBERON:0005498!1.74e-07!18;UBERON:0004140!1.74e-07!18;UBERON:0009881!1.74e-07!18;UBERON:0004141!1.74e-07!18;UBERON:0003084!1.74e-07!18;UBERON:0007005!1.74e-07!18;UBERON:0004139!1.74e-07!18;UBERON:0004291!1.74e-07!18 | |ontology_enrichment_uberon=UBERON:0000073!1.08e-16!75;UBERON:0001016!1.08e-16!75;UBERON:0001017!1.29e-15!73;UBERON:0005743!1.29e-15!73;UBERON:0000025!1.32e-15!114;UBERON:0004111!3.12e-14!122;UBERON:0004121!4.56e-14!102;UBERON:0000924!4.56e-14!102;UBERON:0006601!4.56e-14!102;UBERON:0001049!5.47e-10!52;UBERON:0005068!5.47e-10!52;UBERON:0006241!5.47e-10!52;UBERON:0007135!5.47e-10!52;UBERON:0000955!1.50e-09!50;UBERON:0006238!1.50e-09!50;UBERON:0002020!1.73e-09!34;UBERON:0002616!4.20e-09!49;UBERON:0000033!4.87e-09!63;UBERON:0002346!5.75e-09!71;UBERON:0003075!5.75e-09!71;UBERON:0007284!5.75e-09!71;UBERON:0002791!1.62e-07!29;UBERON:0003528!1.62e-07!29;UBERON:0001893!1.62e-07!29;UBERON:0007100!1.74e-07!18;UBERON:0000948!1.74e-07!18;UBERON:0005498!1.74e-07!18;UBERON:0004140!1.74e-07!18;UBERON:0009881!1.74e-07!18;UBERON:0004141!1.74e-07!18;UBERON:0003084!1.74e-07!18;UBERON:0007005!1.74e-07!18;UBERON:0004139!1.74e-07!18;UBERON:0004291!1.74e-07!18 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,1.08e-16,75;UBERON:0010314,7.11e-16,92;UBERON:0001017,1.28e-15,73;UBERON:0000025,1.32e-15,114;UBERON:0004121,2.35e-15,95;UBERON:0000924,2.35e-15,95;UBERON:0006601,2.35e-15,95;UBERON:0004111,3.11e-14,122;UBERON:0000073,4.77e-11,54;UBERON:0010371,2.17e-10,73;UBERON:0002346,3.16e-10,64;UBERON:0003075,3.16e-10,64;UBERON:0007284,3.16e-10,64;UBERON:0001049,5.46e-10,52;UBERON:0005068,5.46e-10,52;UBERON:0006241,5.46e-10,52;UBERON:0007135,5.46e-10,52;UBERON:0002020,1.72e-09,34;UBERON:0000955,5.20e-08,47;UBERON:0006238,5.20e-08,47;UBERON:0002616,1.37e-07,46;UBERON:0003528,1.62e-07,29;UBERON:0002791,1.62e-07,29;UBERON:0001893,1.62e-07,29;UBERON:0007100,1.74e-07,18;UBERON:0000948,1.74e-07,18;UBERON:0005498,1.74e-07,18;UBERON:0004140,1.74e-07,18;UBERON:0009881,1.74e-07,18;UBERON:0004141,1.74e-07,18;UBERON:0003084,1.74e-07,18;UBERON:0007005,1.74e-07,18;UBERON:0004139,1.74e-07,18;UBERON:0004291,1.74e-07,18 | |||
|phase1_expression=11.0502704502308,0.348975407639361,0,0,0,0,0.233612640595526,3.48632973292256,19.42884365693,20.8317428426574,2.91070545983358,1.11681022593471,1.54080656938085,2.36035086531293,3.33109761815663,2.83465374345756,1.39912375625629,2.5236973228659,2.4680598049033,3.39511721438424,25.0877705945656,6.15603897445489,4.96279599363977,0,0,0,0,0,0,0,0.221730510655305,1.27006134691926,1.23012957516914,0,0,0,0,11.3003540298965,5.4693474116666,5.23523743973798,7.64700934440319,8.87959130445979,7.2826552954673,2.26614272356039,3.85232338634155,4.58866880404204,4.69434806608824,30.5235218932625,16.9158360705543,17.8875507148341,11.4788865732797,28.7505128729943,6.04017381807851,5.80289713609076,2.68875039313971,15.6928255981928,10.8882707176728,13.4074743992135,9.1042407386819,8.99284664762456,10.1413024560989,4.06613438482959,3.55717918444456,13.9484456178617,6.92206453796882,7.8152812644071,20.9720077362883,25.3584081512226,11.716926190858,8.23536223823313,8.41299845405528,40.5624397853401,29.154647405613,9.67677313798137,10.543001812006,11.0306254393203,44.0463523997555,78.0169635700497,72.9631032967156,11.3422207447967,7.593474419,12.5019208933622,61.1410767813024,30.9519435517424,53.1737902263299,26.2219441071564,35.5929201997757,18.8263440283554,38.8475371799234,39.448354375742,40.2911639295332,23.2314446784974,8.15965600449301,6.47643829965381,5.84798775702902,8.51251085484938,11.0951091904084,7.32850387085648,3.11743205523443,7.0667914902068,36.1967588826069,7.69958864485907,15.2883143823987,78.2173373468664,8.44315059943735,6.58735650235256,8.08839112023653,12.7885945285347,5.17875767294343,12.1722554033156,5.55153045651635,3.95805121805784,6.22661842591358,5.72746034099966,9.99504010653491,12.5666591329675,4.20231445148436,27.6184771717031,5.30766331169925,17.1472860944254,17.8881629952919,15.5160081003271,0,20.4946557908083,33.7209197969663,1.78819938646014,11.8616973260861,4.19931911695385,9.27612657633372,49.2811203641867,41.1750542536764,12.1884721549478,33.2004451567248,42.4487659168349,52.9859513626878,62.6251275441545,9.87841829348068,8.08645308965605,1.0108910337347,12.8369532090749,6.37590170517248,5.51765050640335,6.84236093260327,11.3028613376786,13.8794458268709,11.2740073850668,11.8064172945258,13.4525752784288,6.25147179505242,9.26619792822314,8.79755620819744,5.91828477554452,4.72680323683516,6.61679116392116,5.76189981942242,10.1507476077432,0.702213187313235,4.63226232806487,6.81992398549422,21.7482061162277,21.8109235782419,17.1058958387964,26.2786656499583,24.7922932001729,22.0601971428951,25.3461999777945,32.1928081679543,41.2181658556108,34.8866881816579,34.47516745661,46.2902902506836,39.3277966174144,36.6648692536055,42.0066090719964,31.9640721817473,19.2431625149262,0.330418782983798,1.05780226665418,5.11891801284562,4.41249676534833,5.54130083685001,3.42861991859682,3.33567065767305,3.42406127002606,1.89811624617805,2.9645811850322,3.77002813200404,3.58121649674071,3.50935356814416,0,1.29682829924817,2.78797782556114,6.06937283049861,8.68288695833939,7.88954149711563,9.16430975303914,9.11576689687841,12.8348550399283,11.1928670709935,8.26616828685772,10.2049173096894,8.14421281883883,12.1545577105731,4.50481785433454,5.89676985339609,3.14806957338795,2.23146133527353,5.06472035480075,4.07401362850272,5.17853047411459,9.07957269940198,5.76578967694971,38.8174157623857,14.5134969590716,13.4176199439261,8.33510297225469,9.32866550313943,11.0962009913574,66.3263952698111,8.14813070613084,9.12603868075345,13.4098617762399,15.9589368836181,17.7556632888325,26.1848004974615,65.5649056802204,27.9014205067958,28.3474802750432,38.1096897091394,52.4362607090362,45.5888352125964,68.2743556504735,12.0633027151418,9.24639662491806,5.90117127622843,7.45029215022778,71.4450125445674,80.6416403754358,3.77050374366353,23.2273253028023,18.2994767261429,21.0836921920185,23.2657269551423,20.790285421872,18.9378872970035,24.0615051170508,21.0501564870945,21.9191893433484,15.8115111178609,37.5945940213514,9.22610553853746,5.34196811001766,9.93610452056814,7.4236555337641,2.65490276679926,6.06951590387454,5.74414758233027,3.20628635585027,2.65771703592696,6.45613810682248,9.8202751403924,4.36240475373007,5.70395805415554,4.74055136903724,5.27093042874994,5.15677716240934,2.7235168460303,7.74262704334634,3.49268446213437,7.50179622610573,6.7389288784064,6.59964625127661,6.2528627828806,5.78483403317739,7.74416636610244,8.26145076368899,3.30792597082443,14.6748765117917,12.1098320021929,13.932285658404,10.8628833042854,9.68431308495861,1.1659233465194,88.8187196630341,5.63873906632914,8.87463532241857,8.88933731374616,5.46268525313604,4.23752105935178,4.11800711771741,11.3885548095883,13.8551937800421,11.3323978519628,0.954670618015114,5.21954389408873,5.48962561242491,5.18425635944646,3.55450103224597,5.67742665740062,3.50647300600534,7.10819719237889,3.40282724579238,1.8146096260851,4.34937519160848,6.20062232552609,18.5400517094534,11.913011312911,10.1114617938905,8.65370817300798,7.0961572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|phase1_expression=11.0502704502308,0.348975407639361,0,0,0,0,0.233612640595526,3.48632973292256,19.42884365693,20.8317428426574,2.91070545983358,1.11681022593471,1.54080656938085,2.36035086531293,3.33109761815663,2.83465374345756,1.39912375625629,2.5236973228659,2.4680598049033,3.39511721438424,25.0877705945656,6.15603897445489,4.96279599363977,0,0,0,0,0,0,0,0.221730510655305,1.27006134691926,1.23012957516914,0,0,0,0,11.3003540298965,5.4693474116666,5.23523743973798,7.64700934440319,8.87959130445979,7.2826552954673,2.26614272356039,3.85232338634155,4.58866880404204,4.69434806608824,30.5235218932625,16.9158360705543,17.8875507148341,11.4788865732797,28.7505128729943,6.04017381807851,5.80289713609076,2.68875039313971,15.6928255981928,10.8882707176728,13.4074743992135,9.1042407386819,8.99284664762456,10.1413024560989,4.06613438482959,3.55717918444456,13.9484456178617,6.92206453796882,7.8152812644071,20.9720077362883,25.3584081512226,11.716926190858,8.23536223823313,8.41299845405528,40.5624397853401,29.154647405613,9.67677313798137,10.543001812006,11.0306254393203,44.0463523997555,78.0169635700497,72.9631032967156,11.3422207447967,7.593474419,12.5019208933622,61.1410767813024,30.9519435517424,53.1737902263299,26.2219441071564,35.5929201997757,18.8263440283554,38.8475371799234,39.448354375742,40.2911639295332,23.2314446784974,8.15965600449301,6.47643829965381,5.84798775702902,8.51251085484938,11.0951091904084,7.32850387085648,3.11743205523443,7.0667914902068,36.1967588826069,7.69958864485907,15.2883143823987,78.2173373468664,8.44315059943735,6.58735650235256,8.08839112023653,12.7885945285347,5.17875767294343,12.1722554033156,5.55153045651635,3.95805121805784,6.22661842591358,5.72746034099966,9.99504010653491,12.5666591329675,4.20231445148436,27.6184771717031,5.30766331169925,17.1472860944254,17.8881629952919,15.5160081003271,0,20.4946557908083,33.7209197969663,1.78819938646014,11.8616973260861,4.19931911695385,9.27612657633372,49.2811203641867,41.1750542536764,12.1884721549478,33.2004451567248,42.4487659168349,52.9859513626878,62.6251275441545,9.87841829348068,8.08645308965605,1.0108910337347,12.8369532090749,6.37590170517248,5.51765050640335,6.84236093260327,11.3028613376786,13.8794458268709,11.2740073850668,11.8064172945258,13.4525752784288,6.25147179505242,9.26619792822314,8.79755620819744,5.91828477554452,4.72680323683516,6.61679116392116,5.76189981942242,10.1507476077432,0.702213187313235,4.63226232806487,6.81992398549422,21.7482061162277,21.8109235782419,17.1058958387964,26.2786656499583,24.7922932001729,22.0601971428951,25.3461999777945,32.1928081679543,41.2181658556108,34.8866881816579,34.47516745661,46.2902902506836,39.3277966174144,36.6648692536055,42.0066090719964,31.9640721817473,19.2431625149262,0.330418782983798,1.05780226665418,5.11891801284562,4.41249676534833,5.54130083685001,3.42861991859682,3.33567065767305,3.42406127002606,1.89811624617805,2.9645811850322,3.77002813200404,3.58121649674071,3.50935356814416,0,1.29682829924817,2.78797782556114,6.06937283049861,8.68288695833939,7.88954149711563,9.16430975303914,9.11576689687841,12.8348550399283,11.1928670709935,8.26616828685772,10.2049173096894,8.14421281883883,12.1545577105731,4.50481785433454,5.89676985339609,3.14806957338795,2.23146133527353,5.06472035480075,4.07401362850272,5.17853047411459,9.07957269940198,5.76578967694971,38.8174157623857,14.5134969590716,13.4176199439261,8.33510297225469,9.32866550313943,11.0962009913574,66.3263952698111,8.14813070613084,9.12603868075345,13.4098617762399,15.9589368836181,17.7556632888325,26.1848004974615,65.5649056802204,27.9014205067958,28.3474802750432,38.1096897091394,52.4362607090362,45.5888352125964,68.2743556504735,12.0633027151418,9.24639662491806,5.90117127622843,7.45029215022778,71.4450125445674,80.6416403754358,3.77050374366353,23.2273253028023,18.2994767261429,21.0836921920185,23.2657269551423,20.790285421872,18.9378872970035,24.0615051170508,21.0501564870945,21.9191893433484,15.8115111178609,37.5945940213514,9.22610553853746,5.34196811001766,9.93610452056814,7.4236555337641,2.65490276679926,6.06951590387454,5.74414758233027,3.20628635585027,2.65771703592696,6.45613810682248,9.8202751403924,4.36240475373007,5.70395805415554,4.74055136903724,5.27093042874994,5.15677716240934,2.7235168460303,7.74262704334634,3.49268446213437,7.50179622610573,6.7389288784064,6.59964625127661,6.2528627828806,5.78483403317739,7.74416636610244,8.26145076368899,3.30792597082443,14.6748765117917,12.1098320021929,13.932285658404,10.8628833042854,9.68431308495861,1.1659233465194,88.8187196630341,5.63873906632914,8.87463532241857,8.88933731374616,5.46268525313604,4.23752105935178,4.11800711771741,11.3885548095883,13.8551937800421,11.3323978519628,0.954670618015114,5.21954389408873,5.48962561242491,5.18425635944646,3.55450103224597,5.67742665740062,3.50647300600534,7.10819719237889,3.40282724579238,1.8146096260851,4.34937519160848,6.20062232552609,18.5400517094534,11.913011312911,10.1114617938905,8.65370817300798,7.0961572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| ||
|short_description=p3@Qk | |short_description=p3@Qk | ||
}} | }} |
Latest revision as of 22:45, 25 September 2015
Short description: | p3@Qk |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Qk_5end |
Coexpression cluster: | MCL_coexpression_mm9:2190 |
Association with transcript: | 109bp_to_ENSMUST00000042434, ENSMUST00000097414, ENSMUST00000115697, NM_001159516, NM_001159517, NM_021881, uc008akb.2, uc008akc.2, uc008ake.2, uc012ajv.1_5end |
EntrezGene: | Qk |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ectodermal cell | 1.05e-09 | 44 |
neurectodermal cell | 1.05e-09 | 44 |
neural cell | 3.00e-09 | 43 |
neuron | 4.99e-07 | 33 |
neuronal stem cell | 4.99e-07 | 33 |
neuroblast | 4.99e-07 | 33 |
electrically signaling cell | 4.99e-07 | 33 |
Ontology term | p-value | n |
---|---|---|
nervous system | 1.08e-16 | 75 |
structure with developmental contribution from neural crest | 7.11e-16 | 92 |
central nervous system | 1.28e-15 | 73 |
tube | 1.32e-15 | 114 |
ectoderm-derived structure | 2.35e-15 | 95 |
ectoderm | 2.35e-15 | 95 |
presumptive ectoderm | 2.35e-15 | 95 |
anatomical conduit | 3.11e-14 | 122 |
regional part of nervous system | 4.77e-11 | 54 |
ecto-epithelium | 2.17e-10 | 73 |
neurectoderm | 3.16e-10 | 64 |
neural plate | 3.16e-10 | 64 |
presumptive neural plate | 3.16e-10 | 64 |
neural tube | 5.46e-10 | 52 |
neural rod | 5.46e-10 | 52 |
future spinal cord | 5.46e-10 | 52 |
neural keel | 5.46e-10 | 52 |
gray matter | 1.72e-09 | 34 |
brain | 5.20e-08 | 47 |
future brain | 5.20e-08 | 47 |
regional part of brain | 1.37e-07 | 46 |
brain grey matter | 1.62e-07 | 29 |
regional part of telencephalon | 1.62e-07 | 29 |
telencephalon | 1.62e-07 | 29 |
primary circulatory organ | 1.74e-07 | 18 |
heart | 1.74e-07 | 18 |
primitive heart tube | 1.74e-07 | 18 |
primary heart field | 1.74e-07 | 18 |
anterior lateral plate mesoderm | 1.74e-07 | 18 |
heart tube | 1.74e-07 | 18 |
heart primordium | 1.74e-07 | 18 |
cardiac mesoderm | 1.74e-07 | 18 |
cardiogenic plate | 1.74e-07 | 18 |
heart rudiment | 1.74e-07 | 18 |