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FFCP PHASE1:Mm9::chr10:42580501..42580520,+: Difference between revisions

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{{FFCP|EntrezGene=268297|HGNC=|MCL_coexpression_id=122|UniProt=D3Z791|association_with_transcript=28bp_to_ENSMUST00000105495_5end|description=CAGE_peak_3_at_Scml4_5end|id=chr10:42580501..42580520,+|ontology_enrichment_celltype=CL:0000117!4.00e-08!23;CL:0000337!4.00e-08!23|ontology_enrichment_celltype_v019_2=CL:0000838,3.14e-12,12;CL:0000117,6.03e-12,23;CL:0000337,6.03e-12,23;CL:0002031,2.05e-11,25;CL:0000542,4.31e-11,13;CL:0000051,4.31e-11,13;CL:0000084,8.82e-11,11;CL:0000827,8.82e-11,11;CL:0000034,2.29e-09,97;CL:0000738,2.39e-09,17;CL:0002087,2.39e-09,17;CL:0000791,4.23e-09,9;CL:0000789,4.23e-09,9;CL:0002420,4.23e-09,9;CL:0002419,4.23e-09,9;CL:0000790,4.23e-09,9;CL:0000723,4.34e-08,91;CL:0000048,4.34e-08,91;CL:0000988,4.99e-08,32;CL:0002032,4.99e-08,32;CL:0000037,4.99e-08,32;CL:0000837,4.99e-08,32;CL:0000624,1.31e-07,8;CL:0000540,3.83e-07,33;CL:0000047,3.83e-07,33;CL:0000031,3.83e-07,33;CL:0000404,3.83e-07,33|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!1.20e-08!52;UBERON:0005068!1.20e-08!52;UBERON:0006241!1.20e-08!52;UBERON:0007135!1.20e-08!52;UBERON:0003080!6.89e-08!40;UBERON:0002780!1.56e-07!39;UBERON:0001890!1.56e-07!39;UBERON:0006240!1.56e-07!39;UBERON:0007811!2.08e-07!86;UBERON:0000153!2.19e-07!94;UBERON:0002346!8.52e-07!71;UBERON:0003075!8.52e-07!71;UBERON:0007284!8.52e-07!71|ontology_enrichment_uberon_v019_2=UBERON:0002193,7.32e-10,48;UBERON:0002405,7.32e-10,48;UBERON:0002390,1.88e-08,45;UBERON:0003061,1.88e-08,45;UBERON:0004177,5.36e-08,29;UBERON:0005057,5.36e-08,29;UBERON:0001049,3.17e-07,52;UBERON:0005068,3.17e-07,52;UBERON:0006241,3.17e-07,52;UBERON:0007135,3.17e-07,52;UBERON:0000073,9.03e-07,54|phase1_expression=0.160148847104794,0,0,0,0,0.16787927191189,0,17.0442786942881,2.25261955442667,2.34064526321993,0.171217968225505,0.159544317990673,22.427295620988,14.1621051918776,0.666219523631325,2.02475267389826,0.699561878128147,9.30613387806801,10.5578113876419,8.48779303596061,0.0850432901510698,1.09220046320974,1.04479915655574,2.3998863419011,0.68822784320151,0,0,0,0,0,0,0,0,0,0,0,0.204169356262369,0,0,0,0,0,0,0,0,0,0,1.52617609466313,0.219686182734472,0,0.55994568650145,0,9.2280433331755,10.8804321301702,14.7881271622684,0,0,0,3.43937983461316,3.70293685490423,3.80298842103708,0,0,0,0,0,0,0,0.414758449233911,0.270011876663381,0.210324961351382,1.14260393761521,0.441737081903227,5.38959516545798,6.3258010872036,4.5960939330501,0,0.383062014255563,0.153606533256243,4.08847491963601,3.01909223887952,3.12548022334056,0.279182999001381,1.68828783009504,1.22238598221448,1.17851434189467,1.99320353118744,1.86399445825301,0.075726193333184,0.0755715601067855,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.34255163915718,10.3575153458869,1.63286352971307,0.867426633830679,1.52232739156071,0.461230994512117,0.452167921657868,0.940709657085638,0.125666591329675,0,0.433798070759735,1.76922110389975,0,0.220841518460394,0.484875253135222,0,0,0,0.255457055208591,0.718890747035522,0,0.381210681219194,1.04853447583376,0.457500602818626,3.76963056338593,0.347648640384553,0.255715457330331,1.0389402227978,0.324482526135515,0,0.870848794270651,0.505445516867349,0,0,0,0.180062129805349,0.150704817835715,0.204109497453984,0.12811372028485,0.0937017245597288,0,0,0.756424320671277,0.175951124163949,0,0.556094498451196,0,0.411564272815887,0,0,0.51469581422943,0,0,0.234526059981096,0,0,0,0,0,0,0.116765342367169,0,0.164167464079095,0.0810688095458557,0,0.219550115291051,0,0.210289948564127,0.308713837137853,0.660837565967596,0.264450566663544,0,0.232236671860439,0,0.201683524623343,0,0.190225626112559,0.474529061544512,0.329397909448022,0.251335208800269,0.596869416123452,0.58489226135736,0,0.432276099749388,0.398282546508734,0,0.456994050438915,0,0.203651327845314,0.193952487167626,0.210407459670956,0.252946148497029,0.590440591918409,0.31399745568275,0.370191491765402,0,0,0,0,0,0,0,0.287696137450811,0,0.274561413188081,0,0.372140947668503,0,0,0,0.482443521363367,1.10851914099963,0,0,0.169745085775188,0,0,0,0,0.315270288212382,0,0.318909537314974,1.47476983244164,0.690739927463582,0.723245292907558,0,1.08781136763742,0,0.827810238914197,0.642202359951168,0.234423373184406,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164970122972535,0,0,0.302323556964751,0.188605079755898,0,1.22974059177571,0.516856586336442,0,0.356497378384721,0.632073515871632,0,0,2.7235168460303,0.540183282093931,0.517434735131018,0.643011105094777,0.886701168211368,0.535106452806212,1.15184314421485,1.522324745573,0,0,0,0.49465875882444,0,0,0,0,0,0.18542530201051,2.39219233116994,0,0.370389054739423,0.753473828018764,1.91371918809435,2.0590035588587,2.71965487990169,1.81936888020755,1.24379976423981,0,0,0.406638934253697,0.432021363287205,0,0,0.539457385539283,0.165306911450672,0.26175594198403,0.648074866458964,0,0,0,0,0,0,0,0,0,0,0,0,1.58005560314089,0,0.102710957164827,0.77952493786677,1.61124026100733,0.79472541912506,1.20195449519969,0.886137163047463,1.81739609906666,1.06689529317,0.907435666231565,1.07203668813728,1.25075394132428,3.03879945672079,0.226730383615211,0,0,0,0,0,1.28206136987086,0,0,2.82375921308533,0,1.71868654031819,0.859265911718438,0,0.755393897389701,0.675022500231806,0,0.453142408984205,0,0.103787347584177,0.798049746802062,0.512200817262403,0.243106717068294,0,0.183843508450014,0.666740183404846,0.412070114477788,0.64183841918363,0.252697211763798,0.50695859978048,0.943131706930381,0.187283014939765,0.512201219238954,0.229741875822453,0.952587382566147,0.463537303779422,0.192909220463705,0.412085900803307,0.588795680537589,0.342869252385415,0.177475806159338,0.476872379894642,1.0174249164263,0.470546902076653,0.338458431566706,0.365855945745545,0.263069711437843,0.135804113845862,0.561142271657738,0.355905054372522,0.197008964751127,0,0.309873682371932,0.578719832943424,0.499621155875892,0.233931608445408,0.214871054048298,0,0,0.695603506861264|short_description=p3@Scml4}}
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=268297
|HGNC=
|MCL_coexpression_id=122
|TSSclassifier=NA
|UniProt=D3Z791
|association_with_transcript=28bp_to_ENSMUST00000105495_5end
|cluster_id=chr10:42580501..42580520,+
|description=CAGE_peak_3_at_Scml4_5end
|id=chr10:42580501..42580520,+
|ontology_enrichment_celltype=CL:0000117!4.00e-08!23;CL:0000337!4.00e-08!23
|ontology_enrichment_celltype_v019_2=CL:0000838,3.14e-12,12;CL:0000117,6.03e-12,23;CL:0000337,6.03e-12,23;CL:0002031,2.05e-11,25;CL:0000542,4.31e-11,13;CL:0000051,4.31e-11,13;CL:0000084,8.82e-11,11;CL:0000827,8.82e-11,11;CL:0000034,2.29e-09,97;CL:0000738,2.39e-09,17;CL:0002087,2.39e-09,17;CL:0000791,4.23e-09,9;CL:0000789,4.23e-09,9;CL:0002420,4.23e-09,9;CL:0002419,4.23e-09,9;CL:0000790,4.23e-09,9;CL:0000723,4.34e-08,91;CL:0000048,4.34e-08,91;CL:0000988,4.99e-08,32;CL:0002032,4.99e-08,32;CL:0000037,4.99e-08,32;CL:0000837,4.99e-08,32;CL:0000624,1.31e-07,8;CL:0000540,3.83e-07,33;CL:0000047,3.83e-07,33;CL:0000031,3.83e-07,33;CL:0000404,3.83e-07,33
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001049!1.20e-08!52;UBERON:0005068!1.20e-08!52;UBERON:0006241!1.20e-08!52;UBERON:0007135!1.20e-08!52;UBERON:0003080!6.89e-08!40;UBERON:0002780!1.56e-07!39;UBERON:0001890!1.56e-07!39;UBERON:0006240!1.56e-07!39;UBERON:0007811!2.08e-07!86;UBERON:0000153!2.19e-07!94;UBERON:0002346!8.52e-07!71;UBERON:0003075!8.52e-07!71;UBERON:0007284!8.52e-07!71
|ontology_enrichment_uberon_v019_2=UBERON:0002193,7.32e-10,48;UBERON:0002405,7.32e-10,48;UBERON:0002390,1.88e-08,45;UBERON:0003061,1.88e-08,45;UBERON:0004177,5.36e-08,29;UBERON:0005057,5.36e-08,29;UBERON:0001049,3.17e-07,52;UBERON:0005068,3.17e-07,52;UBERON:0006241,3.17e-07,52;UBERON:0007135,3.17e-07,52;UBERON:0000073,9.03e-07,54
|phase1_expression=0.160148847104794,0,0,0,0,0.16787927191189,0,17.0442786942881,2.25261955442667,2.34064526321993,0.171217968225505,0.159544317990673,22.427295620988,14.1621051918776,0.666219523631325,2.02475267389826,0.699561878128147,9.30613387806801,10.5578113876419,8.48779303596061,0.0850432901510698,1.09220046320974,1.04479915655574,2.3998863419011,0.68822784320151,0,0,0,0,0,0,0,0,0,0,0,0.204169356262369,0,0,0,0,0,0,0,0,0,0,1.52617609466313,0.219686182734472,0,0.55994568650145,0,9.2280433331755,10.8804321301702,14.7881271622684,0,0,0,3.43937983461316,3.70293685490423,3.80298842103708,0,0,0,0,0,0,0,0.414758449233911,0.270011876663381,0.210324961351382,1.14260393761521,0.441737081903227,5.38959516545798,6.3258010872036,4.5960939330501,0,0.383062014255563,0.153606533256243,4.08847491963601,3.01909223887952,3.12548022334056,0.279182999001381,1.68828783009504,1.22238598221448,1.17851434189467,1.99320353118744,1.86399445825301,0.075726193333184,0.0755715601067855,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.34255163915718,10.3575153458869,1.63286352971307,0.867426633830679,1.52232739156071,0.461230994512117,0.452167921657868,0.940709657085638,0.125666591329675,0,0.433798070759735,1.76922110389975,0,0.220841518460394,0.484875253135222,0,0,0,0.255457055208591,0.718890747035522,0,0.381210681219194,1.04853447583376,0.457500602818626,3.76963056338593,0.347648640384553,0.255715457330331,1.0389402227978,0.324482526135515,0,0.870848794270651,0.505445516867349,0,0,0,0.180062129805349,0.150704817835715,0.204109497453984,0.12811372028485,0.0937017245597288,0,0,0.756424320671277,0.175951124163949,0,0.556094498451196,0,0.411564272815887,0,0,0.51469581422943,0,0,0.234526059981096,0,0,0,0,0,0,0.116765342367169,0,0.164167464079095,0.0810688095458557,0,0.219550115291051,0,0.210289948564127,0.308713837137853,0.660837565967596,0.264450566663544,0,0.232236671860439,0,0.201683524623343,0,0.190225626112559,0.474529061544512,0.329397909448022,0.251335208800269,0.596869416123452,0.58489226135736,0,0.432276099749388,0.398282546508734,0,0.456994050438915,0,0.203651327845314,0.193952487167626,0.210407459670956,0.252946148497029,0.590440591918409,0.31399745568275,0.370191491765402,0,0,0,0,0,0,0,0.287696137450811,0,0.274561413188081,0,0.372140947668503,0,0,0,0.482443521363367,1.10851914099963,0,0,0.169745085775188,0,0,0,0,0.315270288212382,0,0.318909537314974,1.47476983244164,0.690739927463582,0.723245292907558,0,1.08781136763742,0,0.827810238914197,0.642202359951168,0.234423373184406,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164970122972535,0,0,0.302323556964751,0.188605079755898,0,1.22974059177571,0.516856586336442,0,0.356497378384721,0.632073515871632,0,0,2.7235168460303,0.540183282093931,0.517434735131018,0.643011105094777,0.886701168211368,0.535106452806212,1.15184314421485,1.522324745573,0,0,0,0.49465875882444,0,0,0,0,0,0.18542530201051,2.39219233116994,0,0.370389054739423,0.753473828018764,1.91371918809435,2.0590035588587,2.71965487990169,1.81936888020755,1.24379976423981,0,0,0.406638934253697,0.432021363287205,0,0,0.539457385539283,0.165306911450672,0.26175594198403,0.648074866458964,0,0,0,0,0,0,0,0,0,0,0,0,1.58005560314089,0,0.102710957164827,0.77952493786677,1.61124026100733,0.79472541912506,1.20195449519969,0.886137163047463,1.81739609906666,1.06689529317,0.907435666231565,1.07203668813728,1.25075394132428,3.03879945672079,0.226730383615211,0,0,0,0,0,1.28206136987086,0,0,2.82375921308533,0,1.71868654031819,0.859265911718438,0,0.755393897389701,0.675022500231806,0,0.453142408984205,0,0.103787347584177,0.798049746802062,0.512200817262403,0.243106717068294,0,0.183843508450014,0.666740183404846,0.412070114477788,0.64183841918363,0.252697211763798,0.50695859978048,0.943131706930381,0.187283014939765,0.512201219238954,0.229741875822453,0.952587382566147,0.463537303779422,0.192909220463705,0.412085900803307,0.588795680537589,0.342869252385415,0.177475806159338,0.476872379894642,1.0174249164263,0.470546902076653,0.338458431566706,0.365855945745545,0.263069711437843,0.135804113845862,0.561142271657738,0.355905054372522,0.197008964751127,0,0.309873682371932,0.578719832943424,0.499621155875892,0.233931608445408,0.214871054048298,0,0,0.695603506861264
|short_description=p3@Scml4
}}

Latest revision as of 00:44, 26 September 2015

Short description:p3@Scml4
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Scml4_5end
Coexpression cluster:MCL_coexpression_mm9:122
Association with transcript: 28bp_to_ENSMUST00000105495_5end
EntrezGene:Scml4
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Scml4

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.16
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.17
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E917.04
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E72.25
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F22.34
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.17
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.16
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E422.43
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E814.16
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.67
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A32.02
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.70
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A29.31
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A410.56
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A68.49
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.09
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H21.09
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I91.04
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D12.40
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.69
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.20
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C21.53
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.22
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.56
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A29.23
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I910.88
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A114.79
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C33.44
Mouse Granule cells, donor2.CNhs12357.11731-123E33.70
Mouse Granule cells, donor3.CNhs12108.11636-122C73.80
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.41
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.27
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.21
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F11.14
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.44
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D25.39
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F26.33
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D64.60
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.38
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.15
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D44.09
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F43.02
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D83.13
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.28
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E51.69
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I61.22
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D61.18
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F61.99
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E11.86
Mouse Schwann, donor1.CNhs12507.11728-123D90.08
Mouse Schwann, donor2.CNhs12573.11746-123F90.08
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.28
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.00
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.34
accessory axillary lymph node, adult.CNhs10475.1063-29H910.36
adrenal gland, adult.CNhs10508.49-24D71.63
adrenal gland, embryo E14.CNhs11038.406-44C50.87
adrenal gland, embryo E16.CNhs11004.1254-43D61.52
adrenal gland, embryo E17.CNhs11043.1263-45I10.46
adrenal gland, embryo E18.CNhs11026.1262-18F50.45
adrenal gland, neonate N00.CNhs11191.1311-23C10.94
adrenal gland, neonate N25.CNhs11223.1377-27I30.13
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.43
bone (os femoris), adult.CNhs10483.56-12G21.77
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.22
bone (os femoris), neonate N20.CNhs11195.1350-25C30.48
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I20.00
colon, adult.CNhs10468.36-18H70.26
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.72
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.38
corpora quadrigemina, adult.CNhs10501.16-22A41.05
corpus striatum, adult.CNhs10487.19-21D80.46
corpus striatum, neonate N00.CNhs11226.630-43F13.77
cortex, adult.CNhs10473.12-14D50.35
cortex, neonate N30.CNhs11107.1392-42F20.26
diencephalon, adult.CNhs10482.20-12F21.04
diencephalon, neonate N30.CNhs11201.1388-42B20.32
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.00
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.87
epididymis, adult.CNhs10490.58-23B20.51
eyeball, adult.CNhs10484.31-12G40.00
eyeball, embryo E12.CNhs11016.345-16C60.00
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.18
eyeball, embryo E17.CNhs11023.1261-18D40.15
eyeball, neonate N00.CNhs11207.633-15C60.20
eyeball, neonate N01.CNhs11140.1532-43E70.13
eyeball, neonate N02.CNhs11205.1551-44G80.09
eyeball, neonate N16.CNhs11188.777-19A20.00
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.76
forelimb, embryo E13.CNhs10589.384-1E20.18
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.56
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.41
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.51
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.23
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.12
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.16
heart, neonate N16.CNhs11209.782-15G10.08
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.22
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E80.21
hippocampus, neonate N00.CNhs11228.627-43G10.31
intestinal mucosa, adult.CNhs10506.860-29I30.66
intestine, adult.CNhs10496.178-9A30.26
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.23
intestine, embryo E15.CNhs10602.976-16D80.00
intestine, embryo E16.CNhs10585.463-22H40.20
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.19
intestine, neonate N00.CNhs11126.644-26D10.47
intestine, neonate N01.CNhs11192.1322-23E90.33
intestine, neonate N06.CNhs11102.688-20B80.25
intestine, neonate N07.CNhs11095.720-20F20.60
intestine, neonate N10.CNhs11098.755-23A50.58
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.43
intestine, neonate N30.CNhs11131.1384-42G10.40
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.46
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.20
kidney, embryo E18.CNhs11001.1288-20C70.19
kidney, neonate N00.CNhs11214.646-21G70.21
kidney, neonate N10.CNhs11206.758-6D50.25
kidney, neonate N20.CNhs11113.832-19I10.59
kidney, neonate N25.CNhs11122.1353-25F30.31
kidney, neonate N30.CNhs11203.1385-42H10.37
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.29
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.27
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.37
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.48
lung, adult.CNhs10474.28-22B11.11
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.17
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.32
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.32
lung, neonate N20.CNhs11109.822-18A41.47
lung, neonate N25.CNhs11119.1359-25C70.69
lung, neonate N30.CNhs11133.1394-42H20.72
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A11.09
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.83
medulla oblongata, adult.CNhs10477.17-12C20.64
medulla oblongata, neonate N30.CNhs11200.1396-42A30.23
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I90.00
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.00
oviduct, adult pregnant day01.CNhs10500.988-6G60.16
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.30
pancreas, embryo E16.CNhs11003.460-26E50.19
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I71.23
pancreas, neonate N00.CNhs11105.645-26G90.52
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B60.63
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G82.72
pituitary gland, embryo E12.CNhs11018.346-16E60.54
pituitary gland, embryo E13.CNhs11009.370-44C70.52
pituitary gland, embryo E14.CNhs11037.398-44A50.64
pituitary gland, embryo E15.CNhs10592.427-16B90.89
pituitary gland, embryo E16.CNhs11036.449-43F60.54
pituitary gland, embryo E17.CNhs11039.1265-44F51.15
pituitary gland, neonate N00.CNhs11190.1308-22E91.52
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.49
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.00
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C90.19
spleen, adult.CNhs10465.25-2G22.39
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.37
spleen, neonate N10.CNhs11116.752-24D10.75
spleen, neonate N20.CNhs11112.824-19H11.91
spleen, neonate N25.CNhs11099.1354-25G32.06
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C62.72
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C91.82
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D31.24
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.41
stomach, embryo E16.CNhs11022.459-17D40.43
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.54
stomach, neonate N07.CNhs11210.718-18A90.17
stomach, neonate N25.CNhs11104.1355-25E40.26
stomach, neonate N30.CNhs11134.1386-42I10.65
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.00
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B51.58
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.10
thymus, embryo E16.CNhs11002.456-26C50.78
thymus, embryo E17.CNhs10581.478-18C11.61
thymus, embryo E18.CNhs10595.1273-19G40.79
thymus, neonate N02.CNhs11181.1541-43F81.20
thymus, neonate N03.CNhs11137.2104-43C70.89
thymus, neonate N06.CNhs11197.681-26C41.82
thymus, neonate N07.CNhs11211.713-19D31.07
thymus, neonate N10.CNhs11194.748-24E40.91
thymus, neonate N20.CNhs11186.820-7A21.07
thymus, neonate N25.CNhs11125.1362-25G71.25
thymus, neonate N30.CNhs11132.1393-42G23.04
tongue, adult.CNhs10499.32-1B40.23
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E51.28
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A12.82
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A31.72
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.86
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.76
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.68
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.45
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I80.10
whole body, embryo E12.CNhs10587.857-27C90.80
whole body, embryo E13.CNhs10512.372-23H20.51
whole body, embryo E14.5.CNhs10578.420-27D20.24
whole body, embryo E14.CNhs10519.395-14B10.00
whole body, embryo E16.CNhs10514.453-14F20.18
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.67
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.64
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.94
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.23
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.46
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.59
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.18
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.02
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.47
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.37
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.26
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.14
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.36
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.20
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.31
whole body, embryo E17.5.CNhs10513.490-9F90.58
whole body, embryo E17.CNhs10517.475-3I50.50
whole body, embryo E18.CNhs10516.493-3B30.23
whole body, neonate N00.CNhs10525.657-19C20.21
whole body, neonate N01.CNhs10576.659-23C60.00
whole body, neonate N06.CNhs10515.692-21D10.00
whole body, neonate N10.CNhs10518.761-6B40.70





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
lymphoid lineage restricted progenitor cell3.14e-1212
CNS neuron (sensu Vertebrata)6.03e-1223
neuroblast (sensu Vertebrata)6.03e-1223
hematopoietic lineage restricted progenitor cell2.05e-1125
lymphocyte4.31e-1113
common lymphoid progenitor4.31e-1113
T cell8.82e-1111
pro-T cell8.82e-1111
stem cell2.29e-0997
leukocyte2.39e-0917
nongranular leukocyte2.39e-0917
mature alpha-beta T cell4.23e-099
alpha-beta T cell4.23e-099
immature T cell4.23e-099
mature T cell4.23e-099
immature alpha-beta T cell4.23e-099
somatic stem cell4.34e-0891
multi fate stem cell4.34e-0891
hematopoietic cell4.99e-0832
hematopoietic oligopotent progenitor cell4.99e-0832
hematopoietic stem cell4.99e-0832
hematopoietic multipotent progenitor cell4.99e-0832
CD4-positive, alpha-beta T cell1.31e-078
neuron3.83e-0733
neuronal stem cell3.83e-0733
neuroblast3.83e-0733
electrically signaling cell3.83e-0733

Uber anatomy
Ontology termp-valuen
hemolymphoid system7.32e-1048
immune system7.32e-1048
hematopoietic system1.88e-0845
blood island1.88e-0845
hemopoietic organ5.36e-0829
immune organ5.36e-0829
neural tube3.17e-0752
neural rod3.17e-0752
future spinal cord3.17e-0752
neural keel3.17e-0752
regional part of nervous system9.03e-0754
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