FFCP PHASE1:Mm9::chr17:24844562..24844606,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr17:24844562..24844606,-
|short_description=p1@Tbl3
|description=CAGE_peak_1_at_Tbl3_5end
|association_with_transcript=0bp_to_ENSMUST00000046534,ENSMUST000001...") |
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(8 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=213773 | |EntrezGene=213773 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=301 | |||
|TSSclassifier=NA | |||
|UniProt=Q8C4J7,Q8CE86 | |UniProt=Q8C4J7,Q8CE86 | ||
|association_with_transcript=0bp_to_ENSMUST00000046534,ENSMUST00000126319,ENSMUST00000167702,NM_145396,uc008axv.1,uc012amp.1_5end | |||
|cluster_id=chr17:24844562..24844606,- | |||
|description=CAGE_peak_1_at_Tbl3_5end | |||
|id=chr17:24844562..24844606,- | |||
|ontology_enrichment_celltype=CL:0000034!6.54e-18!97;CL:0000723!2.06e-17!91;CL:0000048!2.06e-17!91;CL:0000548!4.08e-17!115;CL:0000004!4.08e-17!115;CL:0000255!4.08e-17!115;CL:0002371!3.57e-15!118;CL:0000144!1.10e-14!121;CL:0000012!1.10e-14!121;CL:0000219!1.96e-14!54;CL:0002319!8.93e-13!43;CL:0000221!2.30e-12!44;CL:0000133!2.30e-12!44;CL:0000055!1.71e-11!50;CL:0002320!1.94e-11!46;CL:0000134!1.94e-11!46;CL:0000117!9.50e-10!23;CL:0000337!9.50e-10!23;CL:0000540!5.22e-09!33;CL:0000047!5.22e-09!33;CL:0000031!5.22e-09!33;CL:0000404!5.22e-09!33;CL:0000988!5.80e-09!32;CL:0002032!5.80e-09!32;CL:0000037!5.80e-09!32;CL:0000566!5.80e-09!32;CL:0000837!5.80e-09!32;CL:0000393!6.32e-08!39;CL:0000211!6.32e-08!39;CL:0002321!1.74e-07!70;CL:0000220!1.74e-07!70;CL:0000049!3.46e-07!19 | |||
|ontology_enrichment_celltype_v019_2=CL:0000034,6.54e-18,97;CL:0000723,2.06e-17,91;CL:0000048,2.06e-17,91;CL:0000219,1.96e-14,54;CL:0002319,8.93e-13,43;CL:0000221,2.30e-12,44;CL:0000133,2.30e-12,44;CL:0002320,1.94e-11,46;CL:0000134,1.94e-11,46;CL:0000117,9.50e-10,23;CL:0000337,9.50e-10,23;CL:0000540,5.22e-09,33;CL:0000047,5.22e-09,33;CL:0000031,5.22e-09,33;CL:0000404,5.22e-09,33;CL:0000988,5.80e-09,32;CL:0002032,5.80e-09,32;CL:0000037,5.80e-09,32;CL:0000837,5.80e-09,32;CL:0000393,6.32e-08,39;CL:0000211,6.32e-08,39;CL:0002321,1.74e-07,70;CL:0000049,3.46e-07,19 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!7.56e-12!75;UBERON:0001016!7.56e-12!75;UBERON:0001017!9.84e-12!73;UBERON:0005743!9.84e-12!73;UBERON:0002384!1.94e-11!46;UBERON:0002020!1.08e-09!34;UBERON:0002791!3.88e-08!29;UBERON:0003528!3.88e-08!29;UBERON:0001893!3.88e-08!29;UBERON:0001049!4.00e-08!52;UBERON:0005068!4.00e-08!52;UBERON:0006241!4.00e-08!52;UBERON:0007135!4.00e-08!52;UBERON:0004121!1.10e-07!102;UBERON:0000924!1.10e-07!102;UBERON:0006601!1.10e-07!102;UBERON:0002616!1.81e-07!49;UBERON:0000955!2.66e-07!50;UBERON:0006238!2.66e-07!50 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,7.56e-12,75;UBERON:0001017,9.84e-12,73;UBERON:0002384,1.94e-11,46;UBERON:0002020,1.08e-09,34;UBERON:0000073,6.37e-09,54;UBERON:0004121,1.91e-08,95;UBERON:0000924,1.91e-08,95;UBERON:0006601,1.91e-08,95;UBERON:0003528,3.88e-08,29;UBERON:0002791,3.88e-08,29;UBERON:0001893,3.88e-08,29;UBERON:0001049,4.00e-08,52;UBERON:0005068,4.00e-08,52;UBERON:0006241,4.00e-08,52;UBERON:0007135,4.00e-08,52;UBERON:0002346,4.57e-07,64;UBERON:0003075,4.57e-07,64;UBERON:0007284,4.57e-07,64;UBERON:0002616,5.42e-07,46;UBERON:0000955,7.92e-07,47;UBERON:0006238,7.92e-07,47 | |||
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| ||
|short_description=p1@Tbl3 | |||
}} | }} |
Latest revision as of 01:46, 26 September 2015
Short description: | p1@Tbl3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Tbl3_5end |
Coexpression cluster: | MCL_coexpression_mm9:301 |
Association with transcript: | 0bp_to_ENSMUST00000046534, ENSMUST00000126319, ENSMUST00000167702, NM_145396, uc008axv.1, uc012amp.1_5end |
EntrezGene: | Tbl3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
stem cell | 6.54e-18 | 97 |
somatic stem cell | 2.06e-17 | 91 |
multi fate stem cell | 2.06e-17 | 91 |
motile cell | 1.96e-14 | 54 |
neural cell | 8.93e-13 | 43 |
ectodermal cell | 2.30e-12 | 44 |
neurectodermal cell | 2.30e-12 | 44 |
connective tissue cell | 1.94e-11 | 46 |
mesenchymal cell | 1.94e-11 | 46 |
CNS neuron (sensu Vertebrata) | 9.50e-10 | 23 |
neuroblast (sensu Vertebrata) | 9.50e-10 | 23 |
neuron | 5.22e-09 | 33 |
neuronal stem cell | 5.22e-09 | 33 |
neuroblast | 5.22e-09 | 33 |
electrically signaling cell | 5.22e-09 | 33 |
hematopoietic cell | 5.80e-09 | 32 |
hematopoietic oligopotent progenitor cell | 5.80e-09 | 32 |
hematopoietic stem cell | 5.80e-09 | 32 |
hematopoietic multipotent progenitor cell | 5.80e-09 | 32 |
electrically responsive cell | 6.32e-08 | 39 |
electrically active cell | 6.32e-08 | 39 |
embryonic cell | 1.74e-07 | 70 |
common myeloid progenitor | 3.46e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
nervous system | 7.56e-12 | 75 |
central nervous system | 9.84e-12 | 73 |
connective tissue | 1.94e-11 | 46 |
gray matter | 1.08e-09 | 34 |
regional part of nervous system | 6.37e-09 | 54 |
ectoderm-derived structure | 1.91e-08 | 95 |
ectoderm | 1.91e-08 | 95 |
presumptive ectoderm | 1.91e-08 | 95 |
brain grey matter | 3.88e-08 | 29 |
regional part of telencephalon | 3.88e-08 | 29 |
telencephalon | 3.88e-08 | 29 |
neural tube | 4.00e-08 | 52 |
neural rod | 4.00e-08 | 52 |
future spinal cord | 4.00e-08 | 52 |
neural keel | 4.00e-08 | 52 |
neurectoderm | 4.57e-07 | 64 |
neural plate | 4.57e-07 | 64 |
presumptive neural plate | 4.57e-07 | 64 |
regional part of brain | 5.42e-07 | 46 |
brain | 7.92e-07 | 47 |
future brain | 7.92e-07 | 47 |