FFCP PHASE1:Mm9::chr10:57206160..57206220,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chr10:57206160..57206220,+ to FFCP PHASE1:Mm9::chr10:57206160..57206220,+: NSchange) |
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(6 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=15500 | |EntrezGene=15500 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=P38533,E9QNX0,Q8BWK6 | |UniProt=P38533,E9QNX0,Q8BWK6 | ||
|association_with_transcript=0bp_to_ENSMUST00000079833,ENSMUST00000081139,NM_008297,uc007fck.2_5end | |||
|cluster_id=chr10:57206160..57206220,+ | |||
|description=CAGE_peak_1_at_Hsf2_5end | |||
|id=chr10:57206160..57206220,+ | |||
|ontology_enrichment_celltype=CL:0000540!1.44e-09!33;CL:0000047!1.44e-09!33;CL:0000031!1.44e-09!33;CL:0000404!1.44e-09!33;CL:0000393!1.90e-08!39;CL:0000211!1.90e-08!39;CL:0000117!9.02e-08!23;CL:0000337!9.02e-08!23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,1.44e-09,33;CL:0000047,1.44e-09,33;CL:0000031,1.44e-09,33;CL:0000404,1.44e-09,33;CL:0000393,1.90e-08,39;CL:0000211,1.90e-08,39;CL:0000117,9.02e-08,23;CL:0000337,9.02e-08,23 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!4.66e-13!73;UBERON:0005743!4.66e-13!73;UBERON:0000073!5.07e-13!75;UBERON:0001016!5.07e-13!75;UBERON:0000033!9.63e-13!63;UBERON:0000025!1.47e-12!114;UBERON:0002346!4.54e-12!71;UBERON:0003075!4.54e-12!71;UBERON:0007284!4.54e-12!71;UBERON:0004121!6.86e-12!102;UBERON:0000924!6.86e-12!102;UBERON:0006601!6.86e-12!102;UBERON:0003056!1.23e-11!49;UBERON:0004111!3.05e-11!122;UBERON:0001049!6.16e-11!52;UBERON:0005068!6.16e-11!52;UBERON:0006241!6.16e-11!52;UBERON:0007135!6.16e-11!52;UBERON:0000153!7.06e-11!94;UBERON:0000955!3.13e-10!50;UBERON:0006238!3.13e-10!50;UBERON:0007811!3.88e-10!86;UBERON:0002616!5.73e-10!49;UBERON:0003080!3.26e-09!40;UBERON:0002780!4.89e-09!39;UBERON:0001890!4.89e-09!39;UBERON:0006240!4.89e-09!39;UBERON:0002020!3.20e-08!34;UBERON:0000477!2.33e-07!154;UBERON:0002791!3.67e-07!29;UBERON:0003528!3.67e-07!29;UBERON:0001893!3.67e-07!29 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0010314,7.68e-15,92;UBERON:0002346,1.30e-14,64;UBERON:0003075,1.30e-14,64;UBERON:0007284,1.30e-14,64;UBERON:0004121,9.03e-14,95;UBERON:0000924,9.03e-14,95;UBERON:0006601,9.03e-14,95;UBERON:0001017,4.66e-13,73;UBERON:0001016,5.07e-13,75;UBERON:0010371,7.19e-13,73;UBERON:0000025,1.47e-12,114;UBERON:0003056,1.23e-11,49;UBERON:0004111,3.05e-11,122;UBERON:0000073,4.10e-11,54;UBERON:0001049,6.16e-11,52;UBERON:0005068,6.16e-11,52;UBERON:0006241,6.16e-11,52;UBERON:0007135,6.16e-11,52;UBERON:0000955,1.16e-09,47;UBERON:0006238,1.16e-09,47;UBERON:0002616,2.11e-09,46;UBERON:0003080,3.26e-09,40;UBERON:0002780,4.89e-09,39;UBERON:0001890,4.89e-09,39;UBERON:0006240,4.89e-09,39;UBERON:0002020,3.20e-08,34;UBERON:0000483,2.84e-07,174;UBERON:0003528,3.67e-07,29;UBERON:0002791,3.67e-07,29;UBERON:0001893,3.67e-07,29;UBERON:0000119,9.70e-07,176 | |||
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| ||
|short_description=p1@Hsf2 | |||
}} | }} |
Latest revision as of 02:24, 26 September 2015
Short description: | p1@Hsf2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Hsf2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENSMUST00000079833, ENSMUST00000081139, NM_008297, uc007fck.2_5end |
EntrezGene: | Hsf2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 1.44e-09 | 33 |
neuronal stem cell | 1.44e-09 | 33 |
neuroblast | 1.44e-09 | 33 |
electrically signaling cell | 1.44e-09 | 33 |
electrically responsive cell | 1.90e-08 | 39 |
electrically active cell | 1.90e-08 | 39 |
CNS neuron (sensu Vertebrata) | 9.02e-08 | 23 |
neuroblast (sensu Vertebrata) | 9.02e-08 | 23 |
Ontology term | p-value | n |
---|---|---|
structure with developmental contribution from neural crest | 7.68e-15 | 92 |
neurectoderm | 1.30e-14 | 64 |
neural plate | 1.30e-14 | 64 |
presumptive neural plate | 1.30e-14 | 64 |
ectoderm-derived structure | 9.03e-14 | 95 |
ectoderm | 9.03e-14 | 95 |
presumptive ectoderm | 9.03e-14 | 95 |
central nervous system | 4.66e-13 | 73 |
nervous system | 5.07e-13 | 75 |
ecto-epithelium | 7.19e-13 | 73 |
tube | 1.47e-12 | 114 |
pre-chordal neural plate | 1.23e-11 | 49 |
anatomical conduit | 3.05e-11 | 122 |
regional part of nervous system | 4.10e-11 | 54 |
neural tube | 6.16e-11 | 52 |
neural rod | 6.16e-11 | 52 |
future spinal cord | 6.16e-11 | 52 |
neural keel | 6.16e-11 | 52 |
brain | 1.16e-09 | 47 |
future brain | 1.16e-09 | 47 |
regional part of brain | 2.11e-09 | 46 |
anterior neural tube | 3.26e-09 | 40 |
regional part of forebrain | 4.89e-09 | 39 |
forebrain | 4.89e-09 | 39 |
future forebrain | 4.89e-09 | 39 |
gray matter | 3.20e-08 | 34 |
epithelium | 2.84e-07 | 174 |
brain grey matter | 3.67e-07 | 29 |
regional part of telencephalon | 3.67e-07 | 29 |
telencephalon | 3.67e-07 | 29 |
cell layer | 9.70e-07 | 176 |