FFCP PHASE1:Mm9::chr17:28465494..28465515,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=19896 | |EntrezGene=19896 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-12bp_to_ENSMUST00000128758_5end | |association_with_transcript=-12bp_to_ENSMUST00000128758_5end | ||
|cluster_id=chr17:28465494..28465515,+ | |||
|description=CAGE_peak_2_at_Rpl10a_5end | |description=CAGE_peak_2_at_Rpl10a_5end | ||
|id=chr17:28465494..28465515,+ | |id=chr17:28465494..28465515,+ | ||
|ontology_enrichment_celltype=CL:0000034!1.16e-16!97;CL:0000723!3.92e-15!91;CL:0000048!3.92e-15!91;CL:0000540!2.62e-13!33;CL:0000047!2.62e-13!33;CL:0000031!2.62e-13!33;CL:0000404!2.62e-13!33;CL:0000117!3.25e-12!23;CL:0000337!3.25e-12!23;CL:0000393!7.50e-12!39;CL:0000211!7.50e-12!39;CL:0002319!2.57e-11!43;CL:0000221!4.90e-11!44;CL:0000133!4.90e-11!44;CL:0000144!1.20e-10!121;CL:0000012!1.20e-10!121;CL:0000548!1.25e-10!115;CL:0000004!1.25e-10!115;CL:0000255!1.25e-10!115;CL:0000055!1.34e-09!50;CL:0002371!1.36e-09!118;CL:0000988!2.57e-07!32;CL:0002032!2.57e-07!32;CL:0000037!2.57e-07!32;CL:0000566!2.57e-07!32;CL:0000837!2.57e-07!32 | |ontology_enrichment_celltype=CL:0000034!1.16e-16!97;CL:0000723!3.92e-15!91;CL:0000048!3.92e-15!91;CL:0000540!2.62e-13!33;CL:0000047!2.62e-13!33;CL:0000031!2.62e-13!33;CL:0000404!2.62e-13!33;CL:0000117!3.25e-12!23;CL:0000337!3.25e-12!23;CL:0000393!7.50e-12!39;CL:0000211!7.50e-12!39;CL:0002319!2.57e-11!43;CL:0000221!4.90e-11!44;CL:0000133!4.90e-11!44;CL:0000144!1.20e-10!121;CL:0000012!1.20e-10!121;CL:0000548!1.25e-10!115;CL:0000004!1.25e-10!115;CL:0000255!1.25e-10!115;CL:0000055!1.34e-09!50;CL:0002371!1.36e-09!118;CL:0000988!2.57e-07!32;CL:0002032!2.57e-07!32;CL:0000037!2.57e-07!32;CL:0000566!2.57e-07!32;CL:0000837!2.57e-07!32 | ||
|ontology_enrichment_celltype_v019_2=CL:0000034,1.16e-16,97;CL:0000723,3.92e-15,91;CL:0000048,3.92e-15,91;CL:0000540,2.62e-13,33;CL:0000047,2.62e-13,33;CL:0000031,2.62e-13,33;CL:0000404,2.62e-13,33;CL:0000117,3.25e-12,23;CL:0000337,3.25e-12,23;CL:0000393,7.50e-12,39;CL:0000211,7.50e-12,39;CL:0002319,2.57e-11,43;CL:0000221,4.90e-11,44;CL:0000133,4.90e-11,44;CL:0000988,2.57e-07,32;CL:0002032,2.57e-07,32;CL:0000037,2.57e-07,32;CL:0000837,2.57e-07,32 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!8.73e-15!73;UBERON:0005743!8.73e-15!73;UBERON:0000073!9.04e-15!75;UBERON:0001016!9.04e-15!75;UBERON:0002020!1.52e-13!34;UBERON:0002791!4.29e-11!29;UBERON:0003528!4.29e-11!29;UBERON:0001893!4.29e-11!29;UBERON:0001049!2.17e-09!52;UBERON:0005068!2.17e-09!52;UBERON:0006241!2.17e-09!52;UBERON:0007135!2.17e-09!52;UBERON:0004121!8.96e-09!102;UBERON:0000924!8.96e-09!102;UBERON:0006601!8.96e-09!102;UBERON:0000955!1.39e-08!50;UBERON:0006238!1.39e-08!50;UBERON:0003080!1.57e-08!40;UBERON:0002616!2.22e-08!49;UBERON:0002780!2.38e-08!39;UBERON:0001890!2.38e-08!39;UBERON:0006240!2.38e-08!39;UBERON:0000956!5.64e-08!21;UBERON:0001869!5.64e-08!21;UBERON:0000203!5.64e-08!21;UBERON:0002346!1.24e-07!71;UBERON:0003075!1.24e-07!71;UBERON:0007284!1.24e-07!71;UBERON:0003056!4.83e-07!49;UBERON:0002619!8.25e-07!17 | |ontology_enrichment_uberon=UBERON:0001017!8.73e-15!73;UBERON:0005743!8.73e-15!73;UBERON:0000073!9.04e-15!75;UBERON:0001016!9.04e-15!75;UBERON:0002020!1.52e-13!34;UBERON:0002791!4.29e-11!29;UBERON:0003528!4.29e-11!29;UBERON:0001893!4.29e-11!29;UBERON:0001049!2.17e-09!52;UBERON:0005068!2.17e-09!52;UBERON:0006241!2.17e-09!52;UBERON:0007135!2.17e-09!52;UBERON:0004121!8.96e-09!102;UBERON:0000924!8.96e-09!102;UBERON:0006601!8.96e-09!102;UBERON:0000955!1.39e-08!50;UBERON:0006238!1.39e-08!50;UBERON:0003080!1.57e-08!40;UBERON:0002616!2.22e-08!49;UBERON:0002780!2.38e-08!39;UBERON:0001890!2.38e-08!39;UBERON:0006240!2.38e-08!39;UBERON:0000956!5.64e-08!21;UBERON:0001869!5.64e-08!21;UBERON:0000203!5.64e-08!21;UBERON:0002346!1.24e-07!71;UBERON:0003075!1.24e-07!71;UBERON:0007284!1.24e-07!71;UBERON:0003056!4.83e-07!49;UBERON:0002619!8.25e-07!17 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,8.73e-15,73;UBERON:0001016,9.04e-15,75;UBERON:0002020,1.52e-13,34;UBERON:0003528,4.29e-11,29;UBERON:0002791,4.29e-11,29;UBERON:0001893,4.29e-11,29;UBERON:0000073,1.72e-10,54;UBERON:0004121,6.99e-10,95;UBERON:0000924,6.99e-10,95;UBERON:0006601,6.99e-10,95;UBERON:0001049,2.17e-09,52;UBERON:0005068,2.17e-09,52;UBERON:0006241,2.17e-09,52;UBERON:0007135,2.17e-09,52;UBERON:0002346,5.58e-09,64;UBERON:0003075,5.58e-09,64;UBERON:0007284,5.58e-09,64;UBERON:0003080,1.57e-08,40;UBERON:0002780,2.38e-08,39;UBERON:0001890,2.38e-08,39;UBERON:0006240,2.38e-08,39;UBERON:0000956,5.64e-08,21;UBERON:0001869,5.64e-08,21;UBERON:0000203,5.64e-08,21;UBERON:0010314,1.45e-07,92;UBERON:0000955,2.17e-07,47;UBERON:0006238,2.17e-07,47;UBERON:0002616,3.41e-07,46;UBERON:0010371,3.44e-07,73;UBERON:0003056,4.83e-07,49;UBERON:0002619,8.25e-07,17 | |||
|phase1_expression=9.92922852049723,3.48975407639361,2.27499619694768,2.72217790176147,1.00179145989269,4.8684988854448,5.84031601488814,10.975482492534,10.2775767170717,14.9801296846076,27.3948749160808,24.888913606545,12.1552518251156,9.9659258757657,20.9859149943868,14.7806945194573,23.0855419782288,8.3597473819933,9.32378148519024,9.76096199135469,7.39876624314307,13.5035693633204,24.5527801790599,7.67963629408352,8.94696196161963,5.16808767703518,6.46142994238612,7.11055067863434,4.56056206695297,5.29263272495855,8.64748991555688,43.8171164687146,55.3558308826113,31.6963362030877,15.8868390863201,15.7922913090568,16.1293791447272,1.25559489221072,10.1573594788094,1.57057123192139,0.588231488031014,0.683045484958446,0.971020706062307,6.6725313527056,7.09638518536602,5.68994931701213,1.56478268869608,13.2995345392072,6.37089929929968,7.38833616482277,12.4587915246573,20.125359011096,9.56360854529097,10.1550699881588,11.4271891708438,16.9791227783725,13.1805382371828,11.3447860301037,14.3644687210314,24.8625760257855,22.8179305262225,8.80995783379743,16.0073063300005,7.64914759689189,15.8218618010716,12.0781619540837,8.38880309451533,10.7581125490035,13.4796496001021,14.1756235248275,14.7227472945967,23.1377297367081,27.8294361599033,17.6386750869534,16.1978846020819,22.9804696652505,16.5173821499083,18.6423513604374,18.8936035905179,17.9365351313064,15.8273623432169,18.7528813400434,25.9640189071284,25.3243174514256,20.3221669543157,13.5529149317887,15.233769845504,18.8263440283554,10.298762293313,9.82430281388212,3.18850937571846,1.72084775396277,6.11974200336975,4.31762553310254,2.59910566979068,4.92829575807069,7.8648875273781,11.2484012901518,13.768658243952,12.3668851078619,8.59144860637751,3.84979432242953,0,0,15.8038459938186,13.4280728701802,18.1988800205322,4.79572294820052,6.21450920753212,6.53145411885229,7.98032503124225,11.2652226975492,9.22461989024234,9.04335843315735,7.17291113527799,5.78066320116507,1.48316980640624,5.49477556295664,12.3845477272982,6.63244084784378,8.61281921995535,2.90925151881133,5.59175283654366,7.02673912827713,7.74952815209784,8.68553987709211,20.4883862905124,31.1949420116572,22.1102195107133,11.9832511523858,9.15001205637253,13.9476330845279,12.8629996942285,12.7857728665165,11.6361304953354,10.3834408363365,8.24898847187562,4.60305791257344,5.05445516867349,6.73413938836717,10.1493945510909,14.7137346837423,13.3245976055958,7.53524089178575,8.57259889306731,9.99287018221828,7.21503279109912,2.58703370739016,9.26942369611222,5.67318240503458,8.2697028357056,11.3981780862339,6.39508673218875,5.57203466435466,7.81972118350185,8.95654200683219,27.3863143052162,20.0731367549478,15.344828967362,9.52778553663309,11.7263029990548,11.3439098720439,8.75955521665278,9.83821158737019,11.2614992407786,11.1616293480196,7.24338183778972,9.22446204700639,10.0381508447223,8.37254066803386,9.32291309777341,10.8187990694746,7.46470391989572,4.83143107537338,16.4026159880019,12.657267322652,1.98251269790279,5.81791246659797,10.8777007772969,8.59275685883622,8.63411990858025,9.07575860805041,7.33847544688072,6.65789691393957,5.69434873853414,8.72904460037258,7.54005626400809,8.35617182572834,5.06906626509712,12.5834717211591,5.18731319699266,3.78368419183298,27.1225098362907,9.48262654660749,7.88954149711563,5.90588850751411,10.2794818198842,7.36426108848345,4.42655759869801,4.13308414342886,3.1399745568275,2.46794327843601,2.37162101669719,16.6845105716094,12.7763346823582,11.0182435068578,13.7944882544182,11.576503668116,10.9489116266011,11.5078454980324,12.4844124616777,6.86403532970204,5.75072826109418,7.44281895337007,5.92871578917665,4.54641980304801,5.38192240565737,3.85954817090694,4.80358294433172,10.9905018826881,10.2667935158476,9.84521497496091,11.7345124144251,7.70528784232352,6.66522194480839,3.51240566144038,7.25121662888479,7.0868700687608,4.30527875375215,3.11340297959902,3.10832967358612,2.02508682014116,3.01582567878545,7.07077388964322,4.42587845717133,6.89841865761831,10.2752377592187,9.02529986759964,21.9672826804745,7.82659874333556,12.6203287766503,17.9601822376454,14.4333676480975,10.2756583119597,10.6943363559549,13.8707500086528,12.1443210502468,11.6902343164525,11.0680577825027,12.2102100240287,7.38088443082997,11.3961986347043,9.93610452056814,5.1140738121486,9.2921596837974,8.98288353773431,12.3952658355548,15.0884063804718,14.4697927511579,6.45613810682248,4.65170927702798,8.36127577798263,7.48644494607915,8.53299246426703,12.6502330289999,6.18813259489121,6.46835250932197,12.4242154881604,12.1597162755789,6.43011105094777,6.91626911204867,7.49149033928696,6.2528627828806,9.13394847343798,5.16277757740163,2.33015277950202,4.85162475720916,7.09010887648364,10.172258881842,6.1519183426719,8.11731939221328,10.669158483429,7.86998258900597,11.8672193286726,11.9609616558497,6.81076664278634,11.4820606969221,12.9974235333237,15.5831419601969,11.6676868335327,14.7881234094654,18.8934460636938,15.8929969875087,7.63736494412091,10.597255784968,8.53941761932765,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| |phase1_expression=9.92922852049723,3.48975407639361,2.27499619694768,2.72217790176147,1.00179145989269,4.8684988854448,5.84031601488814,10.975482492534,10.2775767170717,14.9801296846076,27.3948749160808,24.888913606545,12.1552518251156,9.9659258757657,20.9859149943868,14.7806945194573,23.0855419782288,8.3597473819933,9.32378148519024,9.76096199135469,7.39876624314307,13.5035693633204,24.5527801790599,7.67963629408352,8.94696196161963,5.16808767703518,6.46142994238612,7.11055067863434,4.56056206695297,5.29263272495855,8.64748991555688,43.8171164687146,55.3558308826113,31.6963362030877,15.8868390863201,15.7922913090568,16.1293791447272,1.25559489221072,10.1573594788094,1.57057123192139,0.588231488031014,0.683045484958446,0.971020706062307,6.6725313527056,7.09638518536602,5.68994931701213,1.56478268869608,13.2995345392072,6.37089929929968,7.38833616482277,12.4587915246573,20.125359011096,9.56360854529097,10.1550699881588,11.4271891708438,16.9791227783725,13.1805382371828,11.3447860301037,14.3644687210314,24.8625760257855,22.8179305262225,8.80995783379743,16.0073063300005,7.64914759689189,15.8218618010716,12.0781619540837,8.38880309451533,10.7581125490035,13.4796496001021,14.1756235248275,14.7227472945967,23.1377297367081,27.8294361599033,17.6386750869534,16.1978846020819,22.9804696652505,16.5173821499083,18.6423513604374,18.8936035905179,17.9365351313064,15.8273623432169,18.7528813400434,25.9640189071284,25.3243174514256,20.3221669543157,13.5529149317887,15.233769845504,18.8263440283554,10.298762293313,9.82430281388212,3.18850937571846,1.72084775396277,6.11974200336975,4.31762553310254,2.59910566979068,4.92829575807069,7.8648875273781,11.2484012901518,13.768658243952,12.3668851078619,8.59144860637751,3.84979432242953,0,0,15.8038459938186,13.4280728701802,18.1988800205322,4.79572294820052,6.21450920753212,6.53145411885229,7.98032503124225,11.2652226975492,9.22461989024234,9.04335843315735,7.17291113527799,5.78066320116507,1.48316980640624,5.49477556295664,12.3845477272982,6.63244084784378,8.61281921995535,2.90925151881133,5.59175283654366,7.02673912827713,7.74952815209784,8.68553987709211,20.4883862905124,31.1949420116572,22.1102195107133,11.9832511523858,9.15001205637253,13.9476330845279,12.8629996942285,12.7857728665165,11.6361304953354,10.3834408363365,8.24898847187562,4.60305791257344,5.05445516867349,6.73413938836717,10.1493945510909,14.7137346837423,13.3245976055958,7.53524089178575,8.57259889306731,9.99287018221828,7.21503279109912,2.58703370739016,9.26942369611222,5.67318240503458,8.2697028357056,11.3981780862339,6.39508673218875,5.57203466435466,7.81972118350185,8.95654200683219,27.3863143052162,20.0731367549478,15.344828967362,9.52778553663309,11.7263029990548,11.3439098720439,8.75955521665278,9.83821158737019,11.2614992407786,11.1616293480196,7.24338183778972,9.22446204700639,10.0381508447223,8.37254066803386,9.32291309777341,10.8187990694746,7.46470391989572,4.83143107537338,16.4026159880019,12.657267322652,1.98251269790279,5.81791246659797,10.8777007772969,8.59275685883622,8.63411990858025,9.07575860805041,7.33847544688072,6.65789691393957,5.69434873853414,8.72904460037258,7.54005626400809,8.35617182572834,5.06906626509712,12.5834717211591,5.18731319699266,3.78368419183298,27.1225098362907,9.48262654660749,7.88954149711563,5.90588850751411,10.2794818198842,7.36426108848345,4.42655759869801,4.13308414342886,3.1399745568275,2.46794327843601,2.37162101669719,16.6845105716094,12.7763346823582,11.0182435068578,13.7944882544182,11.576503668116,10.9489116266011,11.5078454980324,12.4844124616777,6.86403532970204,5.75072826109418,7.44281895337007,5.92871578917665,4.54641980304801,5.38192240565737,3.85954817090694,4.80358294433172,10.9905018826881,10.2667935158476,9.84521497496091,11.7345124144251,7.70528784232352,6.66522194480839,3.51240566144038,7.25121662888479,7.0868700687608,4.30527875375215,3.11340297959902,3.10832967358612,2.02508682014116,3.01582567878545,7.07077388964322,4.42587845717133,6.89841865761831,10.2752377592187,9.02529986759964,21.9672826804745,7.82659874333556,12.6203287766503,17.9601822376454,14.4333676480975,10.2756583119597,10.6943363559549,13.8707500086528,12.1443210502468,11.6902343164525,11.0680577825027,12.2102100240287,7.38088443082997,11.3961986347043,9.93610452056814,5.1140738121486,9.2921596837974,8.98288353773431,12.3952658355548,15.0884063804718,14.4697927511579,6.45613810682248,4.65170927702798,8.36127577798263,7.48644494607915,8.53299246426703,12.6502330289999,6.18813259489121,6.46835250932197,12.4242154881604,12.1597162755789,6.43011105094777,6.91626911204867,7.49149033928696,6.2528627828806,9.13394847343798,5.16277757740163,2.33015277950202,4.85162475720916,7.09010887648364,10.172258881842,6.1519183426719,8.11731939221328,10.669158483429,7.86998258900597,11.8672193286726,11.9609616558497,6.81076664278634,11.4820606969221,12.9974235333237,15.5831419601969,11.6676868335327,14.7881234094654,18.8934460636938,15.8929969875087,7.63736494412091,10.597255784968,8.53941761932765,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| ||
|short_description=p2@Rpl10a | |short_description=p2@Rpl10a | ||
}} | }} |
Latest revision as of 04:14, 26 September 2015
Short description: | p2@Rpl10a |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Rpl10a_5end |
Coexpression cluster: | NA |
Association with transcript: | -12bp_to_ENSMUST00000128758_5end |
EntrezGene: | Rpl10a |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
stem cell | 1.16e-16 | 97 |
somatic stem cell | 3.92e-15 | 91 |
multi fate stem cell | 3.92e-15 | 91 |
neuron | 2.62e-13 | 33 |
neuronal stem cell | 2.62e-13 | 33 |
neuroblast | 2.62e-13 | 33 |
electrically signaling cell | 2.62e-13 | 33 |
CNS neuron (sensu Vertebrata) | 3.25e-12 | 23 |
neuroblast (sensu Vertebrata) | 3.25e-12 | 23 |
electrically responsive cell | 7.50e-12 | 39 |
electrically active cell | 7.50e-12 | 39 |
neural cell | 2.57e-11 | 43 |
ectodermal cell | 4.90e-11 | 44 |
neurectodermal cell | 4.90e-11 | 44 |
hematopoietic cell | 2.57e-07 | 32 |
hematopoietic oligopotent progenitor cell | 2.57e-07 | 32 |
hematopoietic stem cell | 2.57e-07 | 32 |
hematopoietic multipotent progenitor cell | 2.57e-07 | 32 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 8.73e-15 | 73 |
nervous system | 9.04e-15 | 75 |
gray matter | 1.52e-13 | 34 |
brain grey matter | 4.29e-11 | 29 |
regional part of telencephalon | 4.29e-11 | 29 |
telencephalon | 4.29e-11 | 29 |
regional part of nervous system | 1.72e-10 | 54 |
ectoderm-derived structure | 6.99e-10 | 95 |
ectoderm | 6.99e-10 | 95 |
presumptive ectoderm | 6.99e-10 | 95 |
neural tube | 2.17e-09 | 52 |
neural rod | 2.17e-09 | 52 |
future spinal cord | 2.17e-09 | 52 |
neural keel | 2.17e-09 | 52 |
neurectoderm | 5.58e-09 | 64 |
neural plate | 5.58e-09 | 64 |
presumptive neural plate | 5.58e-09 | 64 |
anterior neural tube | 1.57e-08 | 40 |
regional part of forebrain | 2.38e-08 | 39 |
forebrain | 2.38e-08 | 39 |
future forebrain | 2.38e-08 | 39 |
cerebral cortex | 5.64e-08 | 21 |
cerebral hemisphere | 5.64e-08 | 21 |
pallium | 5.64e-08 | 21 |
structure with developmental contribution from neural crest | 1.45e-07 | 92 |
brain | 2.17e-07 | 47 |
future brain | 2.17e-07 | 47 |
regional part of brain | 3.41e-07 | 46 |
ecto-epithelium | 3.44e-07 | 73 |
pre-chordal neural plate | 4.83e-07 | 49 |
regional part of cerebral cortex | 8.25e-07 | 17 |