Personal tools

FFCP PHASE1:Mm9::chr10:62328079..62328093,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
(Created page with "{{FFCP |id=chr10:62328079..62328093,- |short_description=p5@Tet1 |description=CAGE_peak_5_at_Tet1_5end |association_with_transcript=-27bp_to_ENSMUST00000173081_5end |Entr...")
 
No edit summary
 
(8 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|id=chr10:62328079..62328093,-
|DHSsupport=NA
|short_description=p5@Tet1
|DPIdataset=NA
|description=CAGE_peak_5_at_Tet1_5end
|association_with_transcript=-27bp_to_ENSMUST00000173081_5end
|EntrezGene=52463
|EntrezGene=52463
|HGNC=
|HGNC=
|MCL_coexpression_id=1901
|TSSclassifier=NA
|UniProt=
|UniProt=
|association_with_transcript=-27bp_to_ENSMUST00000173081_5end
|cluster_id=chr10:62328079..62328093,-
|description=CAGE_peak_5_at_Tet1_5end
|id=chr10:62328079..62328093,-
|ontology_enrichment_celltype=CL:0000540!8.25e-10!33;CL:0000047!8.25e-10!33;CL:0000031!8.25e-10!33;CL:0000404!8.25e-10!33;CL:0000393!1.27e-07!39;CL:0000211!1.27e-07!39;CL:0000117!9.54e-07!23;CL:0000337!9.54e-07!23
|ontology_enrichment_celltype_v019_2=CL:0000540,9.75e-12,33;CL:0000047,9.75e-12,33;CL:0000031,9.75e-12,33;CL:0000404,9.75e-12,33;CL:0000393,7.21e-09,39;CL:0000211,7.21e-09,39;CL:0000117,5.76e-08,23;CL:0000337,5.76e-08,23;CL:0002319,1.95e-07,43;CL:0000221,4.00e-07,44;CL:0000133,4.00e-07,44
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002346!3.60e-19!71;UBERON:0003075!3.60e-19!71;UBERON:0007284!3.60e-19!71;UBERON:0001017!6.58e-19!73;UBERON:0005743!6.58e-19!73;UBERON:0000073!9.10e-18!75;UBERON:0001016!9.10e-18!75;UBERON:0004121!2.60e-17!102;UBERON:0000924!2.60e-17!102;UBERON:0006601!2.60e-17!102;UBERON:0000033!2.88e-17!63;UBERON:0001049!1.14e-15!52;UBERON:0005068!1.14e-15!52;UBERON:0006241!1.14e-15!52;UBERON:0007135!1.14e-15!52;UBERON:0003056!1.59e-15!49;UBERON:0000955!5.18e-15!50;UBERON:0006238!5.18e-15!50;UBERON:0002616!2.30e-14!49;UBERON:0003080!3.15e-12!40;UBERON:0000153!5.34e-12!94;UBERON:0002780!8.20e-12!39;UBERON:0001890!8.20e-12!39;UBERON:0006240!8.20e-12!39;UBERON:0007811!3.64e-11!86;UBERON:0002020!4.88e-11!34;UBERON:0002791!4.39e-09!29;UBERON:0003528!4.39e-09!29;UBERON:0001893!4.39e-09!29;UBERON:0000468!4.33e-08!333;UBERON:0000025!1.43e-07!114;UBERON:0002021!3.59e-07!10;UBERON:0000411!3.59e-07!10;UBERON:0001950!3.59e-07!10
|ontology_enrichment_uberon_v019_2=UBERON:0001017,5.63e-26,73;UBERON:0002346,4.55e-25,64;UBERON:0003075,4.55e-25,64;UBERON:0007284,4.55e-25,64;UBERON:0001016,7.58e-25,75;UBERON:0004121,5.48e-24,95;UBERON:0000924,5.48e-24,95;UBERON:0006601,5.48e-24,95;UBERON:0010314,2.78e-23,92;UBERON:0000073,6.64e-21,54;UBERON:0010371,3.92e-20,73;UBERON:0001049,1.31e-19,52;UBERON:0005068,1.31e-19,52;UBERON:0006241,1.31e-19,52;UBERON:0007135,1.31e-19,52;UBERON:0003056,7.21e-19,49;UBERON:0000955,5.16e-17,47;UBERON:0006238,5.16e-17,47;UBERON:0002616,4.88e-16,46;UBERON:0003080,7.37e-15,40;UBERON:0002780,3.33e-14,39;UBERON:0001890,3.33e-14,39;UBERON:0006240,3.33e-14,39;UBERON:0002020,1.65e-13,34;UBERON:0002021,4.11e-11,10;UBERON:0000411,4.11e-11,10;UBERON:0001950,4.11e-11,10;UBERON:0003528,4.61e-11,29;UBERON:0002791,4.61e-11,29;UBERON:0001893,4.61e-11,29;UBERON:0000025,1.80e-09,114;UBERON:0004111,5.50e-08,122;UBERON:0002619,9.30e-08,17
|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0.0874204024189974,0,0,0,0,0,0,0.340173160604279,0.695036658406197,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0.608261587317087,0.367093504323363,0,0.218025156380447,0,0,0,0,0,0,0,0.257259436035947,0,0,1.41621522601718,1.5869729378161,0,0,0,0,0,0,0.299600110518405,0,1.03689612308478,0.675029691658453,0.630974884054146,1.42825492201902,0.662605622854841,1.22490799214954,0.670918297127655,0,1.10115880999389,2.17068474744819,1.99688493233117,1.58263545276233,2.10421580285542,2.6045668527838,0.837548997004143,1.68828783009504,1.83357897332172,4.12480019663135,2.70506193518296,1.3047961207771,0,0.0755715601067855,0,0,0,0,0,0,0,0.170430322578058,0,0,0.845060518660083,2.56652954828636,0,0,0,0,0,0,0,0.445326417194474,0.867426633830679,0.304465478312141,0.230615497256059,0.452167921657868,0.470354828542819,0.125666591329675,0,0.144599356919912,0,0.647067399789637,0.662524555381181,0.484875253135222,0,3.22058876712702,4.1889341362691,0,0.239630249011841,0,0,1.49790639404823,2.28750301409313,1.7591609295801,0.869121600961382,1.27857728665165,1.66230435647648,2.59586020908412,0.611036183101898,0.373220911830279,0,0.420883711772948,1.17108398666433,1.60931473103431,1.26043490863744,0.753524089178575,1.49680298132921,2.43416068541215,1.96773621575431,4.13925393182425,1.29340795759705,0.756424320671277,0.703804496655795,0.43839146485515,1.39023624612799,0.348252166522167,1.85203922767149,0.59710280045548,0,0,0,1.65700618028402,0.938104239924385,2.34080679899319,1.42046841351126,1.57411385397923,0.925602677324269,1.86027155800326,0.804820204198858,0.817357396570186,1.15191894939436,2.62667942526552,1.86458261955468,1.02339991197733,1.53685080703735,0.671032093801859,0.841159794256509,2.36680608472354,0,0,1.06644125267617,1.16118335930219,0.38660238396628,0.80673409849337,0.889512175379481,0,0,0,0.251335208800269,0.596869416123452,0,0,0.216138049874694,0,0.379335801906163,0.228497025219458,0,1.4255592949172,0.775809948670503,0.631222379012867,0.379419222745544,0.442830443938806,0,0.370191491765402,0,0,0,0.224862112384854,0,0,0,0,0,0.274561413188081,0,0,0.312037673114561,0,0,0,0.184753190166605,0.568474235311454,0.977789858652155,1.01847051465113,1.17345124144251,0.670025029767263,0,0.195133647857799,0.472905432318573,0.664394068946325,0.637819074629948,0.163863314715738,0.172684981865896,0,0,0,0,0.275936746304732,0.642202359951168,3.04750385139728,0.163934945376675,0,0.631016438832513,1.56175497718655,2.80050417052639,1.67278158566786,2.00518806674155,2.54768877709949,0.404810701674894,1.75353514746787,3.55759000151871,3.21321316421807,0.709700426041343,0.890328018336276,0.162886959353576,0.659880491890142,0,0.971122544619926,0.302323556964751,0.188605079755898,0,0.614870295887855,0,0.363533729477506,0.712994756769443,0.316036757935816,0,0,2.04263763452273,1.26042765821917,0.517434735131018,0.643011105094777,1.77340233642274,1.42695054081656,1.48094118541909,0.304464949114599,0,0,0,0.16488625294148,0.161464426695906,0.422190474497091,0.596861720015682,0,0,2.78137953015765,0,1.03193433981611,0.740778109478847,0,0.136694227721025,0,0,0.139951452323658,0,0,0.790839983952838,0.813277868507395,0.324016022465404,1.04544148007234,0.436725127492355,0.674321731924103,0.909188012978695,0,0.129614973291793,0,0,0.747582730219894,0.496375471371293,0.388902376688095,0.645799117388655,0.675824501963113,0.704143431874524,0.781226309063701,0.419437377702843,0.241584120826006,0,0.316011120628178,0.202725215290164,0.410843828659309,0.51968329191118,0,0.198681354781265,0.600977247599844,0.295379054349154,0.403865799792591,0.838274873204998,0.302478555410522,0.38983152295901,0.384847366561318,0.233753804363138,0.226730383615211,0,0,0,0.386379188064381,0.187682475451182,0.183151624267265,0.428736758158132,0,2.82375921308533,5.52390283808612,5.15605962095457,5.499301834998,1.37016503954128,3.0215755895588,2.70009000092722,2.2516060161211,1.35942722695261,1.55328093525546,1.3492355185943,0.798049746802062,1.70733605754134,0.729320151204882,0.838452650511929,0.735374033800057,1.11123363900808,0.412070114477788,0.64183841918363,1.51618327058278,1.01391719956096,0.565879024158229,0.936415074698824,0.960377286073039,0.918967503289812,1.90517476513229,1.0429589335037,0.38581844092741,0.412085900803307,0.883193520806384,0.342869252385415,0.70990322463735,0.715308569841963,0.290692833264657,0.470546902076653,1.35383372626682,0.548783918618318,1.05227884575137,1.08643291076689,0,1.06771516311757,0.689531376628944,0.409231043169689,0.77468420592983,1.35034627686799,1.49886346762768,0.233931608445408,1.28922632428979,0,0.661774257358546,0.695603506861264
|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0.0874204024189974,0,0,0,0,0,0,0.340173160604279,0.695036658406197,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0.608261587317087,0.367093504323363,0,0.218025156380447,0,0,0,0,0,0,0,0.257259436035947,0,0,1.41621522601718,1.5869729378161,0,0,0,0,0,0,0.299600110518405,0,1.03689612308478,0.675029691658453,0.630974884054146,1.42825492201902,0.662605622854841,1.22490799214954,0.670918297127655,0,1.10115880999389,2.17068474744819,1.99688493233117,1.58263545276233,2.10421580285542,2.6045668527838,0.837548997004143,1.68828783009504,1.83357897332172,4.12480019663135,2.70506193518296,1.3047961207771,0,0.0755715601067855,0,0,0,0,0,0,0,0.170430322578058,0,0,0.845060518660083,2.56652954828636,0,0,0,0,0,0,0,0.445326417194474,0.867426633830679,0.304465478312141,0.230615497256059,0.452167921657868,0.470354828542819,0.125666591329675,0,0.144599356919912,0,0.647067399789637,0.662524555381181,0.484875253135222,0,3.22058876712702,4.1889341362691,0,0.239630249011841,0,0,1.49790639404823,2.28750301409313,1.7591609295801,0.869121600961382,1.27857728665165,1.66230435647648,2.59586020908412,0.611036183101898,0.373220911830279,0,0.420883711772948,1.17108398666433,1.60931473103431,1.26043490863744,0.753524089178575,1.49680298132921,2.43416068541215,1.96773621575431,4.13925393182425,1.29340795759705,0.756424320671277,0.703804496655795,0.43839146485515,1.39023624612799,0.348252166522167,1.85203922767149,0.59710280045548,0,0,0,1.65700618028402,0.938104239924385,2.34080679899319,1.42046841351126,1.57411385397923,0.925602677324269,1.86027155800326,0.804820204198858,0.817357396570186,1.15191894939436,2.62667942526552,1.86458261955468,1.02339991197733,1.53685080703735,0.671032093801859,0.841159794256509,2.36680608472354,0,0,1.06644125267617,1.16118335930219,0.38660238396628,0.80673409849337,0.889512175379481,0,0,0,0.251335208800269,0.596869416123452,0,0,0.216138049874694,0,0.379335801906163,0.228497025219458,0,1.4255592949172,0.775809948670503,0.631222379012867,0.379419222745544,0.442830443938806,0,0.370191491765402,0,0,0,0.224862112384854,0,0,0,0,0,0.274561413188081,0,0,0.312037673114561,0,0,0,0.184753190166605,0.568474235311454,0.977789858652155,1.01847051465113,1.17345124144251,0.670025029767263,0,0.195133647857799,0.472905432318573,0.664394068946325,0.637819074629948,0.163863314715738,0.172684981865896,0,0,0,0,0.275936746304732,0.642202359951168,3.04750385139728,0.163934945376675,0,0.631016438832513,1.56175497718655,2.80050417052639,1.67278158566786,2.00518806674155,2.54768877709949,0.404810701674894,1.75353514746787,3.55759000151871,3.21321316421807,0.709700426041343,0.890328018336276,0.162886959353576,0.659880491890142,0,0.971122544619926,0.302323556964751,0.188605079755898,0,0.614870295887855,0,0.363533729477506,0.712994756769443,0.316036757935816,0,0,2.04263763452273,1.26042765821917,0.517434735131018,0.643011105094777,1.77340233642274,1.42695054081656,1.48094118541909,0.304464949114599,0,0,0,0.16488625294148,0.161464426695906,0.422190474497091,0.596861720015682,0,0,2.78137953015765,0,1.03193433981611,0.740778109478847,0,0.136694227721025,0,0,0.139951452323658,0,0,0.790839983952838,0.813277868507395,0.324016022465404,1.04544148007234,0.436725127492355,0.674321731924103,0.909188012978695,0,0.129614973291793,0,0,0.747582730219894,0.496375471371293,0.388902376688095,0.645799117388655,0.675824501963113,0.704143431874524,0.781226309063701,0.419437377702843,0.241584120826006,0,0.316011120628178,0.202725215290164,0.410843828659309,0.51968329191118,0,0.198681354781265,0.600977247599844,0.295379054349154,0.403865799792591,0.838274873204998,0.302478555410522,0.38983152295901,0.384847366561318,0.233753804363138,0.226730383615211,0,0,0,0.386379188064381,0.187682475451182,0.183151624267265,0.428736758158132,0,2.82375921308533,5.52390283808612,5.15605962095457,5.499301834998,1.37016503954128,3.0215755895588,2.70009000092722,2.2516060161211,1.35942722695261,1.55328093525546,1.3492355185943,0.798049746802062,1.70733605754134,0.729320151204882,0.838452650511929,0.735374033800057,1.11123363900808,0.412070114477788,0.64183841918363,1.51618327058278,1.01391719956096,0.565879024158229,0.936415074698824,0.960377286073039,0.918967503289812,1.90517476513229,1.0429589335037,0.38581844092741,0.412085900803307,0.883193520806384,0.342869252385415,0.70990322463735,0.715308569841963,0.290692833264657,0.470546902076653,1.35383372626682,0.548783918618318,1.05227884575137,1.08643291076689,0,1.06771516311757,0.689531376628944,0.409231043169689,0.77468420592983,1.35034627686799,1.49886346762768,0.233931608445408,1.28922632428979,0,0.661774257358546,0.695603506861264
|short_description=p5@Tet1
}}
}}

Latest revision as of 04:42, 26 September 2015

Short description:p5@Tet1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_5_at_Tet1_5end
Coexpression cluster:MCL_coexpression_mm9:1901
Association with transcript: -27bp_to_ENSMUST00000173081_5end
EntrezGene:Tet1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p5@Tet1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.32
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.09
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.34
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.70
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.13
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.61
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.37
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.22
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.26
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C31.42
Mouse Granule cells, donor2.CNhs12357.11731-123E31.59
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.30
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D51.04
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.68
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.63
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F11.43
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.66
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D21.22
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.67
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D31.10
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F32.17
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D72.00
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D41.58
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F42.10
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D82.60
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.84
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E51.69
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I61.83
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D64.12
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F62.71
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E11.30
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.08
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.17
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.85
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H12.57
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.00
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.45
adrenal gland, embryo E14.CNhs11038.406-44C50.87
adrenal gland, embryo E16.CNhs11004.1254-43D60.30
adrenal gland, embryo E17.CNhs11043.1263-45I10.23
adrenal gland, embryo E18.CNhs11026.1262-18F50.45
adrenal gland, neonate N00.CNhs11191.1311-23C10.47
adrenal gland, neonate N25.CNhs11223.1377-27I30.13
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.14
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.65
bone (os femoris), neonate N16.CNhs11225.1525-43A60.66
bone (os femoris), neonate N20.CNhs11195.1350-25C30.48
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B23.22
cerebellum, neonate N30.CNhs11135.1395-42I24.19
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.24
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A41.50
corpus striatum, adult.CNhs10487.19-21D82.29
corpus striatum, neonate N00.CNhs11226.630-43F11.76
cortex, adult.CNhs10473.12-14D50.87
cortex, neonate N30.CNhs11107.1392-42F21.28
diencephalon, adult.CNhs10482.20-12F21.66
diencephalon, neonate N30.CNhs11201.1388-42B22.60
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.61
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.37
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.42
eyeball, embryo E12.CNhs11016.345-16C61.17
eyeball, embryo E14.CNhs10521.399-16E21.61
eyeball, embryo E15.CNhs10593.426-16C91.26
eyeball, embryo E17.CNhs11023.1261-18D40.75
eyeball, neonate N00.CNhs11207.633-15C61.50
eyeball, neonate N01.CNhs11140.1532-43E72.43
eyeball, neonate N02.CNhs11205.1551-44G81.97
eyeball, neonate N16.CNhs11188.777-19A24.14
forelimb, embryo E11.CNhs10596.335-25E21.29
forelimb, embryo E12.CNhs10600.359-14H20.76
forelimb, embryo E13.CNhs10589.384-1E20.70
forelimb, embryo E14.CNhs10577.413-26A80.44
forelimb, embryo E15.CNhs11007.437-20E71.39
forelimb, embryo E17.CNhs10598.1517-43C40.35
forelimb, embryo E18.CNhs11008.1520-43B51.85
gonad, embryo E13.CNhs11044.1564-45I60.60
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E91.66
heart, embryo E12.CNhs11015.353-12F50.94
heart, embryo E13.CNhs11013.376-3I92.34
heart, embryo E14.CNhs10597.403-26D41.42
heart, embryo E15.CNhs11017.431-16C81.57
heart, embryo E16.CNhs11021.457-17C60.93
heart, embryo E17.CNhs11025.479-18E51.86
heart, embryo E18.CNhs11030.1283-20G30.80
heart, neonate N00.CNhs11213.639-21E30.82
heart, neonate N03.CNhs11221.1349-25I21.15
heart, neonate N10.CNhs11118.749-24G12.63
heart, neonate N16.CNhs11209.782-15G11.86
heart, neonate N20.CNhs11127.821-26I61.02
heart, neonate N25.CNhs11196.1351-25D31.54
heart, neonate N30.CNhs11202.1390-42D20.67
hippocampus, adult.CNhs10478.13-16E80.84
hippocampus, neonate N00.CNhs11228.627-43G12.37
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I51.07
intestine, embryo E13.CNhs11010.381-16D51.16
intestine, embryo E15.CNhs10602.976-16D80.39
intestine, embryo E16.CNhs10585.463-22H40.81
intestine, embryo E17.CNhs10582.482-18D30.89
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.25
intestine, neonate N07.CNhs11095.720-20F20.60
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.22
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.38
kidney, embryo E15.CNhs10997.434-16F80.23
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I21.43
kidney, embryo E18.CNhs11001.1288-20C70.78
kidney, neonate N00.CNhs11214.646-21G70.63
kidney, neonate N10.CNhs11206.758-6D50.38
kidney, neonate N20.CNhs11113.832-19I10.44
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.37
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.22
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.27
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.31
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.18
lung, embryo E12.CNhs10522.354-16G20.57
lung, embryo E14.CNhs10604.404-26F80.98
lung, embryo E15.CNhs11020.432-17C51.02
lung, embryo E16.CNhs10998.458-17B61.17
lung, embryo E17.CNhs10605.480-44A60.67
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.20
lung, neonate N06.CNhs11212.683-20E50.47
lung, neonate N07.CNhs11111.715-19A30.66
lung, neonate N10.CNhs11219.750-23E60.64
lung, neonate N20.CNhs11109.822-18A40.16
lung, neonate N25.CNhs11119.1359-25C70.17
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.28
medulla oblongata, adult.CNhs10477.17-12C20.64
medulla oblongata, neonate N30.CNhs11200.1396-42A33.05
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.16
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.63
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E21.56
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E32.80
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D71.67
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D82.01
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D92.55
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.40
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D51.75
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D63.56
olfactory brain, adult.CNhs10489.18-22I93.21
ovary, adult.CNhs10507.91-2I70.71
ovary, embryo E18.CNhs11040.505-44H70.89
ovary, neonate N00.CNhs11217.1299-22I40.16
oviduct, adult pregnant day01.CNhs10500.988-6G60.66
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.97
pancreas, embryo E15.CNhs11042.1556-45F20.30
pancreas, embryo E16.CNhs11003.460-26E50.19
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.61
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.36
pancreas, neonate N02.CNhs11139.1539-43D80.71
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G82.04
pituitary gland, embryo E12.CNhs11018.346-16E61.26
pituitary gland, embryo E13.CNhs11009.370-44C70.52
pituitary gland, embryo E14.CNhs11037.398-44A50.64
pituitary gland, embryo E15.CNhs10592.427-16B91.77
pituitary gland, embryo E16.CNhs11036.449-43F61.43
pituitary gland, embryo E17.CNhs11039.1265-44F51.48
pituitary gland, neonate N00.CNhs11190.1308-22E90.30
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.16
skin, neonate N00.CNhs11124.650-25G40.16
skin, neonate N03.CNhs11215.662-22H30.42
skin, neonate N06.CNhs11097.693-20I50.60
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C92.78
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C11.03
spleen, embryo E18.CNhs11011.1271-21F20.74
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.14
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.14
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.79
stomach, embryo E15.CNhs10603.1252-16G80.81
stomach, embryo E16.CNhs11022.459-17D40.32
stomach, embryo E17.CNhs11006.1035-18D51.05
stomach, embryo E18.CNhs10999.1286-20C60.44
stomach, neonate N03.CNhs11193.1340-24B80.67
stomach, neonate N07.CNhs11210.718-18A90.91
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.13
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.75
testis, embryo E15.CNhs11034.443-27C50.50
testis, embryo E16.CNhs11033.470-26G50.39
testis, embryo E17.CNhs11029.486-18I50.65
testis, embryo E18.CNhs11027.503-18G50.68
testis, neonate N00.CNhs11189.1300-22B70.70
testis, neonate N07.CNhs11222.726-26I40.78
testis, neonate N10.CNhs11204.763-44D90.42
testis, neonate N20.CNhs11110.839-18H30.24
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.32
thymus, embryo E14.CNhs11041.402-44I40.20
thymus, embryo E15.CNhs11005.430-45I20.41
thymus, embryo E16.CNhs11002.456-26C50.52
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.20
thymus, neonate N02.CNhs11181.1541-43F80.60
thymus, neonate N03.CNhs11137.2104-43C70.30
thymus, neonate N06.CNhs11197.681-26C40.40
thymus, neonate N07.CNhs11211.713-19D30.84
thymus, neonate N10.CNhs11194.748-24E40.30
thymus, neonate N20.CNhs11186.820-7A20.39
thymus, neonate N25.CNhs11125.1362-25G70.38
thymus, neonate N30.CNhs11132.1393-42G20.23
tongue, adult.CNhs10499.32-1B40.23
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.39
uterus, adult pregnant day19.CNhs10497.590-15F50.19
uterus, adult.CNhs10509.92-27E50.18
vagina, adult.CNhs10502.89-27D50.43
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A12.82
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A25.52
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A35.16
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D75.50
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A41.37
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A53.02
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A62.70
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A72.25
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A81.36
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A91.55
whole body, embryo E11.CNhs11014.324-5I81.35
whole body, embryo E12.CNhs10587.857-27C90.80
whole body, embryo E13.CNhs10512.372-23H21.71
whole body, embryo E14.5.CNhs10578.420-27D20.73
whole body, embryo E14.CNhs10519.395-14B10.84
whole body, embryo E16.CNhs10514.453-14F20.74
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.11
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.64
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.52
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.01
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.57
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.94
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.96
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.92
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G51.91
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.04
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.39
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.88
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.71
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.72
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.29
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.47
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.35
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.55
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.05
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.09
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.07
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.77
whole body, embryo E17.5.CNhs10513.490-9F91.35
whole body, embryo E17.CNhs10517.475-3I51.50
whole body, embryo E18.CNhs10516.493-3B30.23
whole body, neonate N00.CNhs10525.657-19C21.29
whole body, neonate N01.CNhs10576.659-23C60.00
whole body, neonate N06.CNhs10515.692-21D10.66
whole body, neonate N10.CNhs10518.761-6B40.70





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
neuron9.75e-1233
neuronal stem cell9.75e-1233
neuroblast9.75e-1233
electrically signaling cell9.75e-1233
electrically responsive cell7.21e-0939
electrically active cell7.21e-0939
CNS neuron (sensu Vertebrata)5.76e-0823
neuroblast (sensu Vertebrata)5.76e-0823
neural cell1.95e-0743
ectodermal cell4.00e-0744
neurectodermal cell4.00e-0744

Uber anatomy
Ontology termp-valuen
central nervous system5.63e-2673
neurectoderm4.55e-2564
neural plate4.55e-2564
presumptive neural plate4.55e-2564
nervous system7.58e-2575
ectoderm-derived structure5.48e-2495
ectoderm5.48e-2495
presumptive ectoderm5.48e-2495
structure with developmental contribution from neural crest2.78e-2392
regional part of nervous system6.64e-2154
ecto-epithelium3.92e-2073
neural tube1.31e-1952
neural rod1.31e-1952
future spinal cord1.31e-1952
neural keel1.31e-1952
pre-chordal neural plate7.21e-1949
brain5.16e-1747
future brain5.16e-1747
regional part of brain4.88e-1646
anterior neural tube7.37e-1540
regional part of forebrain3.33e-1439
forebrain3.33e-1439
future forebrain3.33e-1439
gray matter1.65e-1334
occipital lobe4.11e-1110
visual cortex4.11e-1110
neocortex4.11e-1110
brain grey matter4.61e-1129
regional part of telencephalon4.61e-1129
telencephalon4.61e-1129
tube1.80e-09114
anatomical conduit5.50e-08122
regional part of cerebral cortex9.30e-0817
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr10:62328079..62328093,-&oldid=4233795"