FFCP PHASE1:Mm9::chr19:8913671..8913755,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=14704 | |EntrezGene=14704 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1 | |||
|TSSclassifier=NA | |||
|UniProt=P63216 | |UniProt=P63216 | ||
|association_with_transcript=0bp_to_ENSMUST00000096259,NM_010316,uc008gnh.1_5end | |association_with_transcript=0bp_to_ENSMUST00000096259,NM_010316,uc008gnh.1_5end | ||
|cluster_id=chr19:8913671..8913755,- | |||
|description=CAGE_peak_1_at_Gng3_5end | |description=CAGE_peak_1_at_Gng3_5end | ||
|id=chr19:8913671..8913755,- | |id=chr19:8913671..8913755,- | ||
|ontology_enrichment_celltype=CL:0000221!7.65e-14!44;CL:0000133!7.65e-14!44;CL:0000540!8.23e-14!33;CL:0000047!8.23e-14!33;CL:0000031!8.23e-14!33;CL:0000404!8.23e-14!33;CL:0002319!9.66e-14!43;CL:0000117!4.23e-13!23;CL:0000337!4.23e-13!23;CL:0000393!1.73e-08!39;CL:0000211!1.73e-08!39;CL:0000055!1.88e-08!50 | |ontology_enrichment_celltype=CL:0000221!7.65e-14!44;CL:0000133!7.65e-14!44;CL:0000540!8.23e-14!33;CL:0000047!8.23e-14!33;CL:0000031!8.23e-14!33;CL:0000404!8.23e-14!33;CL:0002319!9.66e-14!43;CL:0000117!4.23e-13!23;CL:0000337!4.23e-13!23;CL:0000393!1.73e-08!39;CL:0000211!1.73e-08!39;CL:0000055!1.88e-08!50 | ||
|ontology_enrichment_celltype_v019_2=CL:0000221,1.79e-14,44;CL:0000133,1.79e-14,44;CL:0000540,1.93e-14,33;CL:0000047,1.93e-14,33;CL:0000031,1.93e-14,33;CL:0000404,1.93e-14,33;CL:0002319,2.29e-14,43;CL:0000117,1.08e-13,23;CL:0000337,1.08e-13,23;CL:0000393,1.48e-09,39;CL:0000211,1.48e-09,39 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!4.00e-32!75;UBERON:0001016!4.00e-32!75;UBERON:0001017!4.72e-32!73;UBERON:0005743!4.72e-32!73;UBERON:0002346!2.60e-31!71;UBERON:0003075!2.60e-31!71;UBERON:0007284!2.60e-31!71;UBERON:0004121!6.24e-30!102;UBERON:0000924!6.24e-30!102;UBERON:0006601!6.24e-30!102;UBERON:0000033!4.24e-27!63;UBERON:0001049!5.18e-26!52;UBERON:0005068!5.18e-26!52;UBERON:0006241!5.18e-26!52;UBERON:0007135!5.18e-26!52;UBERON:0000955!1.05e-24!50;UBERON:0006238!1.05e-24!50;UBERON:0002616!4.93e-24!49;UBERON:0003056!7.85e-23!49;UBERON:0003080!8.07e-20!40;UBERON:0002780!4.10e-19!39;UBERON:0001890!4.10e-19!39;UBERON:0006240!4.10e-19!39;UBERON:0002020!4.59e-19!34;UBERON:0002791!3.86e-16!29;UBERON:0003528!3.86e-16!29;UBERON:0001893!3.86e-16!29;UBERON:0007811!2.44e-13!86;UBERON:0000153!1.15e-12!94;UBERON:0000956!1.00e-11!21;UBERON:0001869!1.00e-11!21;UBERON:0000203!1.00e-11!21;UBERON:0002619!9.27e-10!17;UBERON:0002021!4.23e-08!10;UBERON:0000411!4.23e-08!10;UBERON:0001950!4.23e-08!10;UBERON:0000468!6.71e-07!333;UBERON:0003076!9.87e-07!12;UBERON:0003057!9.87e-07!12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,1.06e-33,75;UBERON:0001017,1.26e-33,73;UBERON:0002346,1.33e-31,64;UBERON:0003075,1.33e-31,64;UBERON:0007284,1.33e-31,64;UBERON:0004121,1.17e-29,95;UBERON:0000924,1.17e-29,95;UBERON:0006601,1.17e-29,95;UBERON:0000073,1.56e-28,54;UBERON:0001049,2.84e-27,52;UBERON:0005068,2.84e-27,52;UBERON:0006241,2.84e-27,52;UBERON:0007135,2.84e-27,52;UBERON:0010371,5.92e-25,73;UBERON:0000955,5.65e-24,47;UBERON:0006238,5.65e-24,47;UBERON:0003056,6.30e-24,49;UBERON:0002616,2.79e-23,46;UBERON:0010314,1.79e-21,92;UBERON:0003080,9.28e-21,40;UBERON:0002780,5.13e-20,39;UBERON:0001890,5.13e-20,39;UBERON:0006240,5.13e-20,39;UBERON:0002020,5.77e-20,34;UBERON:0003528,6.88e-17,29;UBERON:0002791,6.88e-17,29;UBERON:0001893,6.88e-17,29;UBERON:0000956,3.01e-12,21;UBERON:0001869,3.01e-12,21;UBERON:0000203,3.01e-12,21;UBERON:0002619,3.51e-10,17;UBERON:0002021,1.95e-08,10;UBERON:0000411,1.95e-08,10;UBERON:0001950,1.95e-08,10;UBERON:0003076,5.33e-07,12;UBERON:0003057,5.33e-07,12 | |||
|phase1_expression=60.6964130527169,0,0,0,0,0,0,0,0.140788722151667,0,0,0,0,0,0,0.202475267389826,0,0.157731082679119,0,0,177.400303255132,0,0,2.07990149631429,3.44113921600755,0,0,0.215471232685889,0,0.504060259519861,0.665191531965914,3.17515336729816,0.61506478758457,0,0,0,0,0,0,0,0,0,0,0,0,0,17.2126095756569,157.414162906682,10.3252505885202,5.05517737593137,19.0381533410493,24.4379359420452,0.167782606057736,0,0,0,0,0,829.092856602632,1059.56893148188,707.989677716402,0.677689064138264,3.55717918444456,0,0,0,49.7336183460552,69.1592949578798,296.033843140704,379.636698588714,348.087811036537,908.941432372903,855.865596187502,441.701821969124,399.196386790954,478.912987823821,860.005030605226,745.949429093667,908.429037677424,840.115652841335,1054.85253073578,855.860667824757,836.99063100614,788.430416654384,743.669071929735,919.535815263317,850.386049413042,853.523062434051,18.931548333296,66.3518297737577,0,0,0,3.2382191498269,0,0,49.0151026259814,0,0,0,61.5485744424094,0,0,0,0,0,0,26.9473956136982,1.55362730188303,68.2833839698194,91.0797965522213,152.537204634383,92.9380453941916,102.189950294678,84.3111030163004,27.0183171358802,0,3.18118585223806,0,0.485300549842228,0,0,1.86391761218122,628.600371183792,511.678304745271,4.08731288333746,0.11981512450592,0,0.127070227073065,1241.31502874777,705.465929546322,1029.86306991704,1463.42695169878,1147.65097249852,1169.63890282576,922.341580540202,3.05518091550949,0.248813941220186,0.252722758433675,77.4426029662224,76.7710613479952,213.80895712313,282.157357404982,169.241510429508,164.98851044197,229.964127911305,198.085445719267,309.667934774602,21.7723672862171,23.4491539408096,18.1229657888867,9.20622076195814,4.44875598760957,0.348252166522167,0.411564272815887,2.58744546864041,0,0,0,5.79952163099405,5.8631514995274,2.88099298337624,0.946978942340841,1.77087808572663,1.3884040159864,0.697601834251224,0.536546802799238,0.116765342367169,2.79751744852917,1.14917224855367,0.405344047729279,0,0.219550115291051,0.536825675041487,1056.28641163761,824.368849770448,0.660837565967596,4.23120906661671,18.7693660471006,24.8493238890669,34.0210097890326,33.6811486120982,30.0210359190575,35.381966456936,4.74529061544512,31.2928013975621,19.8554814952213,27.65494961372,20.4712291475076,7.19055526923377,7.13255564586491,6.96994456390285,16.311439481965,24.9061757489209,3.38123207019241,7.127796474586,5.81857461502877,4.69909993265134,0.632365371242573,0.442830443938806,0,0,0,0.667380422864376,1.37591296579242,0.449724224769707,0.405720242777006,0.482354319504834,0.763877555344259,0,0.162135226775035,0,0,0,0,0,0,0,0.923765950833023,15.9172785887207,3.42226450528254,3.22515662972857,1.17345124144251,3.85264392116176,1.90434912708811,0.585400943573396,0.630540576424764,1.10732344824387,0.478364305972461,1.3109065177259,0,0.433947175744535,0,0,0,0,993.808152024432,871.000043066662,0,0,102.8556795297,99.1714410513462,197.112408925511,20.790285421872,35.2021905050183,31.4214949175604,53.8398233227609,101.412782695225,91.3114767056469,954.002988456345,2.41298144854057,4.09550888434687,2.44330439030364,0.329940245945071,0,9.95400608235424,7.25576536715402,5.65815239267694,4.13422650033082,6.45613810682248,5.68542244970086,4.36240475373007,2.85197902707777,8.53299246426703,1.05418608574999,0,141.622875993576,74.905415117025,84.9886552452697,78.2330177865312,122.542101446811,171.769171350794,212.103687556134,253.314837663347,0.704015124191131,0,25.1402373782657,0.16488625294148,0,0.361877549568935,0,0.656563598980245,7.28702091574627,941.775108911379,1.19609616558497,2.27025554759545,0.370389054739423,0,0,0.228778173206523,0,0.139951452323658,0,4.77335309007557,25.623215480072,24.3983360552218,23.2211482766873,22.3724476735482,20.7444435558869,21.038838036032,18.0184533481232,3.40282724579238,7.51766845092399,1.24267862617385,23.1114104860518,6.87776111802302,2.81279433777066,0.388902376688095,1.29159823477731,0.675824501963113,0.704143431874524,1.17183946359555,2.30690557736564,2.65742532908607,9.50499020650956,0,6.08175645870493,3.59488350076895,1.16928740680016,1.9692936523423,0.993406773906324,0.240390899039938,0.590758108698309,0.504832249740738,0.609654453239999,0.403304740547362,0.292373642219257,0,0.584384510907845,1.58711268530648,0,0,0.167884616364078,15.4551675225752,0.187682475451182,0.183151624267265,1.71494703263253,0,1804.38213716153,1667.7583318655,1631.6064222754,1355.57790232701,1022.1431194978,966.148794761427,1005.78352534539,1258.6477630117,1355.34894527176,1253.49771475116,147.689395612283,250.587620495847,189.172835175581,138.084615294791,240.216684371668,174.099802502163,190.020952270381,191.200533117694,217.262304893659,193.566064211069,195.432540215375,185.796946265285,181.477241476632,176.1972194182,182.759662216761,180.991602687568,138.481769504102,137.930092631549,149.175096090797,171.04514519617,170.748887687937,176.588427128541,150.691672046707,169.76461462656,169.30277536718,159.329306660027,162.440039911022,181.255031180674,155.495710353512,1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|phase1_expression=60.6964130527169,0,0,0,0,0,0,0,0.140788722151667,0,0,0,0,0,0,0.202475267389826,0,0.157731082679119,0,0,177.400303255132,0,0,2.07990149631429,3.44113921600755,0,0,0.215471232685889,0,0.504060259519861,0.665191531965914,3.17515336729816,0.61506478758457,0,0,0,0,0,0,0,0,0,0,0,0,0,17.2126095756569,157.414162906682,10.3252505885202,5.05517737593137,19.0381533410493,24.4379359420452,0.167782606057736,0,0,0,0,0,829.092856602632,1059.56893148188,707.989677716402,0.677689064138264,3.55717918444456,0,0,0,49.7336183460552,69.1592949578798,296.033843140704,379.636698588714,348.087811036537,908.941432372903,855.865596187502,441.701821969124,399.196386790954,478.912987823821,860.005030605226,745.949429093667,908.429037677424,840.115652841335,1054.85253073578,855.860667824757,836.99063100614,788.430416654384,743.669071929735,919.535815263317,850.386049413042,853.523062434051,18.931548333296,66.3518297737577,0,0,0,3.2382191498269,0,0,49.0151026259814,0,0,0,61.5485744424094,0,0,0,0,0,0,26.9473956136982,1.55362730188303,68.2833839698194,91.0797965522213,152.537204634383,92.9380453941916,102.189950294678,84.3111030163004,27.0183171358802,0,3.18118585223806,0,0.485300549842228,0,0,1.86391761218122,628.600371183792,511.678304745271,4.08731288333746,0.11981512450592,0,0.127070227073065,1241.31502874777,705.465929546322,1029.86306991704,1463.42695169878,1147.65097249852,1169.63890282576,922.341580540202,3.05518091550949,0.248813941220186,0.252722758433675,77.4426029662224,76.7710613479952,213.80895712313,282.157357404982,169.241510429508,164.98851044197,229.964127911305,198.085445719267,309.667934774602,21.7723672862171,23.4491539408096,18.1229657888867,9.20622076195814,4.44875598760957,0.348252166522167,0.411564272815887,2.58744546864041,0,0,0,5.79952163099405,5.8631514995274,2.88099298337624,0.946978942340841,1.77087808572663,1.3884040159864,0.697601834251224,0.536546802799238,0.116765342367169,2.79751744852917,1.14917224855367,0.405344047729279,0,0.219550115291051,0.536825675041487,1056.28641163761,824.368849770448,0.660837565967596,4.23120906661671,18.7693660471006,24.8493238890669,34.0210097890326,33.6811486120982,30.0210359190575,35.381966456936,4.74529061544512,31.2928013975621,19.8554814952213,27.65494961372,20.4712291475076,7.19055526923377,7.13255564586491,6.96994456390285,16.311439481965,24.9061757489209,3.38123207019241,7.127796474586,5.81857461502877,4.69909993265134,0.632365371242573,0.442830443938806,0,0,0,0.667380422864376,1.37591296579242,0.449724224769707,0.405720242777006,0.482354319504834,0.763877555344259,0,0.162135226775035,0,0,0,0,0,0,0,0.923765950833023,15.9172785887207,3.42226450528254,3.22515662972857,1.17345124144251,3.85264392116176,1.90434912708811,0.585400943573396,0.630540576424764,1.10732344824387,0.478364305972461,1.3109065177259,0,0.433947175744535,0,0,0,0,993.808152024432,871.000043066662,0,0,102.8556795297,99.1714410513462,197.112408925511,20.790285421872,35.2021905050183,31.4214949175604,53.8398233227609,101.412782695225,91.3114767056469,954.002988456345,2.41298144854057,4.09550888434687,2.44330439030364,0.329940245945071,0,9.95400608235424,7.25576536715402,5.65815239267694,4.13422650033082,6.45613810682248,5.68542244970086,4.36240475373007,2.85197902707777,8.53299246426703,1.05418608574999,0,141.622875993576,74.905415117025,84.9886552452697,78.2330177865312,122.542101446811,171.769171350794,212.103687556134,253.314837663347,0.704015124191131,0,25.1402373782657,0.16488625294148,0,0.361877549568935,0,0.656563598980245,7.28702091574627,941.775108911379,1.19609616558497,2.27025554759545,0.370389054739423,0,0,0.228778173206523,0,0.139951452323658,0,4.77335309007557,25.623215480072,24.3983360552218,23.2211482766873,22.3724476735482,20.7444435558869,21.038838036032,18.0184533481232,3.40282724579238,7.51766845092399,1.24267862617385,23.1114104860518,6.87776111802302,2.81279433777066,0.388902376688095,1.29159823477731,0.675824501963113,0.704143431874524,1.17183946359555,2.30690557736564,2.65742532908607,9.50499020650956,0,6.08175645870493,3.59488350076895,1.16928740680016,1.9692936523423,0.993406773906324,0.240390899039938,0.590758108698309,0.504832249740738,0.609654453239999,0.403304740547362,0.292373642219257,0,0.584384510907845,1.58711268530648,0,0,0.167884616364078,15.4551675225752,0.187682475451182,0.183151624267265,1.71494703263253,0,1804.38213716153,1667.7583318655,1631.6064222754,1355.57790232701,1022.1431194978,966.148794761427,1005.78352534539,1258.6477630117,1355.34894527176,1253.49771475116,147.689395612283,250.587620495847,189.172835175581,138.084615294791,240.216684371668,174.099802502163,190.020952270381,191.200533117694,217.262304893659,193.566064211069,195.432540215375,185.796946265285,181.477241476632,176.1972194182,182.759662216761,180.991602687568,138.481769504102,137.930092631549,149.175096090797,171.04514519617,170.748887687937,176.588427128541,150.691672046707,169.76461462656,169.30277536718,159.329306660027,162.440039911022,181.255031180674,155.495710353512,1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| ||
|short_description=p1@Gng3 | |short_description=p1@Gng3 | ||
}} | }} |
Latest revision as of 04:43, 26 September 2015
Short description: | p1@Gng3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Gng3_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 0bp_to_ENSMUST00000096259, NM_010316, uc008gnh.1_5end |
EntrezGene: | Gng3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ectodermal cell | 1.79e-14 | 44 |
neurectodermal cell | 1.79e-14 | 44 |
neuron | 1.93e-14 | 33 |
neuronal stem cell | 1.93e-14 | 33 |
neuroblast | 1.93e-14 | 33 |
electrically signaling cell | 1.93e-14 | 33 |
neural cell | 2.29e-14 | 43 |
CNS neuron (sensu Vertebrata) | 1.08e-13 | 23 |
neuroblast (sensu Vertebrata) | 1.08e-13 | 23 |
electrically responsive cell | 1.48e-09 | 39 |
electrically active cell | 1.48e-09 | 39 |