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FFCP PHASE1:Mm9::chr5:81449771..81449786,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=319387
|EntrezGene=319387
|HGNC=
|HGNC=
|MCL_coexpression_id=1816
|TSSclassifier=NA
|UniProt=
|UniProt=
|association_with_transcript=0bp_to_ENSMUST00000136104,ENSMUST00000149280_5end
|association_with_transcript=0bp_to_ENSMUST00000136104,ENSMUST00000149280_5end
|cluster_id=chr5:81449771..81449786,+
|description=CAGE_peak_2_at_Lphn3_5end
|description=CAGE_peak_2_at_Lphn3_5end
|id=chr5:81449771..81449786,+
|id=chr5:81449771..81449786,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0004121!6.32e-17!102;UBERON:0000924!6.32e-17!102;UBERON:0006601!6.32e-17!102;UBERON:0000073!6.58e-17!75;UBERON:0001016!6.58e-17!75;UBERON:0001017!1.29e-15!73;UBERON:0005743!1.29e-15!73;UBERON:0000033!2.95e-14!63;UBERON:0003056!1.98e-13!49;UBERON:0002346!6.31e-13!71;UBERON:0003075!6.31e-13!71;UBERON:0007284!6.31e-13!71;UBERON:0001049!9.01e-13!52;UBERON:0005068!9.01e-13!52;UBERON:0006241!9.01e-13!52;UBERON:0007135!9.01e-13!52;UBERON:0000955!4.10e-12!50;UBERON:0006238!4.10e-12!50;UBERON:0002616!1.17e-11!49;UBERON:0003080!7.74e-11!40;UBERON:0002780!1.56e-10!39;UBERON:0001890!1.56e-10!39;UBERON:0006240!1.56e-10!39;UBERON:0002020!1.25e-09!34;UBERON:0000468!4.76e-09!333;UBERON:0002791!5.62e-08!29;UBERON:0003528!5.62e-08!29;UBERON:0001893!5.62e-08!29;UBERON:0000922!1.88e-07!328;UBERON:0002048!3.95e-07!14;UBERON:0000117!3.95e-07!14;UBERON:0000171!3.95e-07!14;UBERON:0000170!3.95e-07!14;UBERON:0005597!3.95e-07!14;UBERON:0000118!3.95e-07!14;UBERON:0000153!9.75e-07!94
|ontology_enrichment_uberon_v019_2=UBERON:0004121,9.68e-19,95;UBERON:0000924,9.68e-19,95;UBERON:0006601,9.68e-19,95;UBERON:0001016,3.04e-17,75;UBERON:0001017,6.81e-16,73;UBERON:0002346,1.90e-15,64;UBERON:0003075,1.90e-15,64;UBERON:0007284,1.90e-15,64;UBERON:0010371,2.34e-15,73;UBERON:0003056,5.09e-14,49;UBERON:0000073,7.82e-14,54;UBERON:0001049,3.73e-13,52;UBERON:0005068,3.73e-13,52;UBERON:0006241,3.73e-13,52;UBERON:0007135,3.73e-13,52;UBERON:0000955,1.35e-11,47;UBERON:0006238,1.35e-11,47;UBERON:0003080,2.78e-11,40;UBERON:0002616,3.98e-11,46;UBERON:0002780,5.80e-11,39;UBERON:0001890,5.80e-11,39;UBERON:0006240,5.80e-11,39;UBERON:0002020,5.27e-10,34;UBERON:0003528,2.91e-08,29;UBERON:0002791,2.91e-08,29;UBERON:0001893,2.91e-08,29;UBERON:0010314,8.30e-08,92;UBERON:0002048,1.90e-07,14;UBERON:0000117,1.90e-07,14;UBERON:0000171,1.90e-07,14;UBERON:0000170,1.90e-07,14;UBERON:0005597,1.90e-07,14;UBERON:0000118,1.90e-07,14;UBERON:0000922,2.25e-07,320;UBERON:0002021,9.99e-07,10;UBERON:0000411,9.99e-07,10;UBERON:0001950,9.99e-07,10
|phase1_expression=5.2849119544582,0,0,0,0,0,0,0,0,0,0,0,0.171200729931206,0,0.666219523631325,0.809901069559304,0,0.315462165358238,1.09691546884591,1.69755860719212,11.3958008802433,0,0,0,0,0,0.430761996159075,0,0,0.504060259519861,0,0,0,0,0,0,0,0,0,0,0,0,0.971020706062307,0.125896817975577,0.608261587317087,0,0,0.872100625521786,0.219686182734472,1.55543919259427,0.699932108126813,5.75010257459886,0,0,0,0.514518872071894,0,0,5.86717736492834,6.87688273053643,2.53532561402472,1.69422266034566,1.77858959222228,0,0,0,4.79360176829448,4.2264013585371,2.17748185847803,2.43010688997043,2.52389953621658,8.56952953211411,5.96345060569357,9.43179153955146,6.03826467414889,8.27296907949019,6.60695285996332,6.63974158042976,7.21950706304344,8.70449499019279,3.65950574409639,6.77187381723788,3.35019598801657,4.50210088025344,8.40390362772456,11.490514833473,7.83044244395066,7.26957838718672,29.7603939799413,39.3727828156353,0.579728977403356,0,0,0,0,0,0.702222100658759,0,0,0,2.67602497575693,0,0,0,0.649473123033642,0.506719730950197,1.01104889002957,1.02765491747154,3.36619248741323,0,3.99016251562112,2.13125834818499,0.922461989024234,0.60289056221049,2.4693628498498,0.251333182659351,0.247194967734374,0.289198713839823,0,1.13236794963186,0,0.484875253135222,0,7.31951992528868,11.9384622883669,1.27728527604296,0,0,0,7.18995069143149,10.5225138648284,7.03664371832041,13.210648334613,16.1100738118108,7.2725815595846,9.73447578406546,3.46253837091075,0.248813941220186,0.252722758433675,1.26265113531884,14.5734896118228,11.4951052216736,7.74267158163002,9.49440352365005,8.36848939561333,12.0426897067759,10.026084527891,1.29351685369508,3.23351989399263,13.0483195315795,20.4103304030181,9.64461222681329,22.799874436499,5.92028683087683,8.0255033199098,14.7285357445685,0,0,0,1.86413195281952,3.04883877975425,1.98068267607116,1.42046841351126,1.77087808572663,1.85120535464854,1.16266972375204,1.3413670069981,0.583826711835847,1.31647879930784,0.820837320395476,0.972825714550269,0.730999937126662,0.658650345873152,0.268412837520744,7.14985825118033,3.80747065803352,0,2.3800550999719,5.33220626338085,8.36052018697579,3.60828891701861,2.01683524623343,2.00140239460383,2.09248188723815,4.2707615539006,2.79988223030818,2.01068167040216,2.58643413653496,3.8992817423824,1.79763881730844,4.75503709724327,1.99141273254367,2.65535061334314,6.85491075658373,7.88954149711563,4.88763186828754,3.87904974335251,2.45475369616115,4.48979413582227,0.295220295959204,0.627994911365499,0.246794327843601,0.296452627087149,1.66845105716094,0.589676985339609,0.449724224769707,0.608580364165509,0,0.25462585178142,1.43848068725405,0.648540907100142,0.274561413188081,1.43768206527355,0.744281895337007,1.24815069245824,0.252578877947112,0.358794827043824,0,26.0501998134913,6.253216588426,3.42226450528254,5.09235257325564,5.39787571063555,6.53274404023081,8.56957107189649,13.0739544064725,24.1181770482472,19.9318220683897,17.3805697836661,22.6131374307718,20.3768278601757,36.1622646453779,0,0,1.47529281905711,4.41498794087572,5.9403718295483,5.39173758324135,0.327869890753351,0.252470927204373,1.57754109708128,2.73307121007647,1.29254038639679,8.60287672629187,8.91194696329577,7.64306633129848,4.04810701674894,4.9683495844923,3.55759000151871,9.96096080907602,6.10342366395555,8.90328018336276,8.63300884573953,8.08353602565424,0,2.42780636154981,0.604647113929502,0.377210159511796,0,3.68922177532713,1.29214146584111,0,0,0.316036757935816,0,0,1.70219802876894,12.2441543941291,4.13947788104814,11.3598628566744,7.44828981297549,9.0968096977056,10.86023535974,2.13125464380219,0.469343416127421,0.63549621259146,0.661585194164886,2.30840754118072,2.74489525383039,2.71408162176701,2.98430860007841,4.26766339337159,2.62332752966866,5.93360966433631,1.87957968877638,0.619160603889667,0.185194527369712,1.50694765603753,0.683471138605126,0.686334519619568,0,0,0,0.954670618015114,3.63786392618306,9.55601495496189,6.91234181259528,5.22720740036172,3.49380101993884,1.61837215661785,2.14898984885873,0.785267825952089,1.55537967950151,1.24267862617385,0,14.5031049662659,12.4093867842823,19.2506676460607,16.6616172286273,13.685446164753,12.9092962510329,1.43224823328345,0.209718688851422,0,0,0.316011120628178,3.04087822935246,3.08132871494482,1.03936658382236,0.537080087002444,0,0,0,0.201932899896295,0.228620419965,0,0.194915761479505,0,0,0.906921534460845,0,0,0,1.15913756419314,0,6.04400360081975,0,1.00314420807073,10.1655331671072,11.9684561491866,13.1765968091061,15.2949332285882,9.59115527678899,9.82012066606611,13.5004500046361,9.00642406448441,10.8754178156209,10.3552062350364,0.830298780673413,7.18244772121856,9.73181552798565,8.75184181445858,3.77303692730368,1.83843508450014,6.22290837844523,4.94484137373346,9.30665707816264,5.30664144703975,5.32306529769503,6.03604292435444,4.96299989590377,6.21043978327232,6.26046611616185,3.81034953026459,5.09891034157364,4.82273051159263,6.59337441285291,3.97437084362873,3.42869252385415,5.85670160325814,7.15308569841963,6.24989591519013,6.68176600948847,6.8537832392258,5.48783918618318,2.89376682581627,5.70377278152619,3.36685362994643,6.64356101495375,5.31924204828043,2.86461730218783,4.95797891795091,5.01557188550968,6.99469618226249,4.67863216890817,3.65280791882107,0.765153328275374,1.54413993383661,1.62307484934295
|phase1_expression=5.2849119544582,0,0,0,0,0,0,0,0,0,0,0,0.171200729931206,0,0.666219523631325,0.809901069559304,0,0.315462165358238,1.09691546884591,1.69755860719212,11.3958008802433,0,0,0,0,0,0.430761996159075,0,0,0.504060259519861,0,0,0,0,0,0,0,0,0,0,0,0,0.971020706062307,0.125896817975577,0.608261587317087,0,0,0.872100625521786,0.219686182734472,1.55543919259427,0.699932108126813,5.75010257459886,0,0,0,0.514518872071894,0,0,5.86717736492834,6.87688273053643,2.53532561402472,1.69422266034566,1.77858959222228,0,0,0,4.79360176829448,4.2264013585371,2.17748185847803,2.43010688997043,2.52389953621658,8.56952953211411,5.96345060569357,9.43179153955146,6.03826467414889,8.27296907949019,6.60695285996332,6.63974158042976,7.21950706304344,8.70449499019279,3.65950574409639,6.77187381723788,3.35019598801657,4.50210088025344,8.40390362772456,11.490514833473,7.83044244395066,7.26957838718672,29.7603939799413,39.3727828156353,0.579728977403356,0,0,0,0,0,0.702222100658759,0,0,0,2.67602497575693,0,0,0,0.649473123033642,0.506719730950197,1.01104889002957,1.02765491747154,3.36619248741323,0,3.99016251562112,2.13125834818499,0.922461989024234,0.60289056221049,2.4693628498498,0.251333182659351,0.247194967734374,0.289198713839823,0,1.13236794963186,0,0.484875253135222,0,7.31951992528868,11.9384622883669,1.27728527604296,0,0,0,7.18995069143149,10.5225138648284,7.03664371832041,13.210648334613,16.1100738118108,7.2725815595846,9.73447578406546,3.46253837091075,0.248813941220186,0.252722758433675,1.26265113531884,14.5734896118228,11.4951052216736,7.74267158163002,9.49440352365005,8.36848939561333,12.0426897067759,10.026084527891,1.29351685369508,3.23351989399263,13.0483195315795,20.4103304030181,9.64461222681329,22.799874436499,5.92028683087683,8.0255033199098,14.7285357445685,0,0,0,1.86413195281952,3.04883877975425,1.98068267607116,1.42046841351126,1.77087808572663,1.85120535464854,1.16266972375204,1.3413670069981,0.583826711835847,1.31647879930784,0.820837320395476,0.972825714550269,0.730999937126662,0.658650345873152,0.268412837520744,7.14985825118033,3.80747065803352,0,2.3800550999719,5.33220626338085,8.36052018697579,3.60828891701861,2.01683524623343,2.00140239460383,2.09248188723815,4.2707615539006,2.79988223030818,2.01068167040216,2.58643413653496,3.8992817423824,1.79763881730844,4.75503709724327,1.99141273254367,2.65535061334314,6.85491075658373,7.88954149711563,4.88763186828754,3.87904974335251,2.45475369616115,4.48979413582227,0.295220295959204,0.627994911365499,0.246794327843601,0.296452627087149,1.66845105716094,0.589676985339609,0.449724224769707,0.608580364165509,0,0.25462585178142,1.43848068725405,0.648540907100142,0.274561413188081,1.43768206527355,0.744281895337007,1.24815069245824,0.252578877947112,0.358794827043824,0,26.0501998134913,6.253216588426,3.42226450528254,5.09235257325564,5.39787571063555,6.53274404023081,8.56957107189649,13.0739544064725,24.1181770482472,19.9318220683897,17.3805697836661,22.6131374307718,20.3768278601757,36.1622646453779,0,0,1.47529281905711,4.41498794087572,5.9403718295483,5.39173758324135,0.327869890753351,0.252470927204373,1.57754109708128,2.73307121007647,1.29254038639679,8.60287672629187,8.91194696329577,7.64306633129848,4.04810701674894,4.9683495844923,3.55759000151871,9.96096080907602,6.10342366395555,8.90328018336276,8.63300884573953,8.08353602565424,0,2.42780636154981,0.604647113929502,0.377210159511796,0,3.68922177532713,1.29214146584111,0,0,0.316036757935816,0,0,1.70219802876894,12.2441543941291,4.13947788104814,11.3598628566744,7.44828981297549,9.0968096977056,10.86023535974,2.13125464380219,0.469343416127421,0.63549621259146,0.661585194164886,2.30840754118072,2.74489525383039,2.71408162176701,2.98430860007841,4.26766339337159,2.62332752966866,5.93360966433631,1.87957968877638,0.619160603889667,0.185194527369712,1.50694765603753,0.683471138605126,0.686334519619568,0,0,0,0.954670618015114,3.63786392618306,9.55601495496189,6.91234181259528,5.22720740036172,3.49380101993884,1.61837215661785,2.14898984885873,0.785267825952089,1.55537967950151,1.24267862617385,0,14.5031049662659,12.4093867842823,19.2506676460607,16.6616172286273,13.685446164753,12.9092962510329,1.43224823328345,0.209718688851422,0,0,0.316011120628178,3.04087822935246,3.08132871494482,1.03936658382236,0.537080087002444,0,0,0,0.201932899896295,0.228620419965,0,0.194915761479505,0,0,0.906921534460845,0,0,0,1.15913756419314,0,6.04400360081975,0,1.00314420807073,10.1655331671072,11.9684561491866,13.1765968091061,15.2949332285882,9.59115527678899,9.82012066606611,13.5004500046361,9.00642406448441,10.8754178156209,10.3552062350364,0.830298780673413,7.18244772121856,9.73181552798565,8.75184181445858,3.77303692730368,1.83843508450014,6.22290837844523,4.94484137373346,9.30665707816264,5.30664144703975,5.32306529769503,6.03604292435444,4.96299989590377,6.21043978327232,6.26046611616185,3.81034953026459,5.09891034157364,4.82273051159263,6.59337441285291,3.97437084362873,3.42869252385415,5.85670160325814,7.15308569841963,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|short_description=p2@Lphn3
|short_description=p2@Lphn3
}}
}}

Latest revision as of 06:06, 26 September 2015

Short description:p2@Lphn3
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Lphn3_5end
Coexpression cluster:MCL_coexpression_mm9:1816
Association with transcript: 0bp_to_ENSMUST00000136104, ENSMUST00000149280_5end
EntrezGene:Lphn3
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Lphn3

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G75.28
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.17
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.67
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.81
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.32
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A41.10
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A61.70
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A311.40
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.43
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.50
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.97
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.13
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.61
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.87
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.22
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C31.56
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.70
Mouse Astrocytes, donor3.CNhs12107.11633-122C45.75
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.51
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C35.87
Mouse Granule cells, donor2.CNhs12357.11731-123E36.88
Mouse Granule cells, donor3.CNhs12108.11636-122C72.54
Mouse Meningeal cells, donor1.CNhs12132.11716-123C61.69
Mouse Meningeal cells, donor3.CNhs12109.11639-122D11.78
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C84.79
Mouse Microglia, donor2.CNhs12634.11736-123E84.23
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D52.18
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F52.43
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D92.52
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F18.57
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D55.96
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D29.43
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F26.04
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D68.27
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D36.61
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F36.64
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D77.22
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D48.70
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F43.66
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D86.77
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E43.35
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E54.50
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I68.40
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D611.49
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F67.83
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E17.27
Mouse Schwann, donor1.CNhs12507.11728-123D929.76
Mouse Schwann, donor2.CNhs12573.11746-123F939.37
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.58
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.70
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G62.68
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.65
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.51
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G31.01
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B61.03
accessory axillary lymph node, adult.CNhs10475.1063-29H93.37
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C53.99
adrenal gland, embryo E16.CNhs11004.1254-43D62.13
adrenal gland, embryo E17.CNhs11043.1263-45I10.92
adrenal gland, embryo E18.CNhs11026.1262-18F50.60
adrenal gland, neonate N00.CNhs11191.1311-23C12.47
adrenal gland, neonate N25.CNhs11223.1377-27I30.25
amnion, adult pregnant day17.5.CNhs10488.583-22A80.25
aorta, adult.CNhs10498.46-23H10.29
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F51.13
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.48
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B27.32
cerebellum, neonate N30.CNhs11135.1395-42I211.94
colon, adult.CNhs10468.36-18H71.28
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A47.19
corpus striatum, adult.CNhs10487.19-21D810.52
corpus striatum, neonate N00.CNhs11226.630-43F17.04
cortex, adult.CNhs10473.12-14D513.21
cortex, neonate N30.CNhs11107.1392-42F216.11
diencephalon, adult.CNhs10482.20-12F27.27
diencephalon, neonate N30.CNhs11201.1388-42B29.73
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B13.46
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.25
epididymis, adult.CNhs10490.58-23B20.25
eyeball, adult.CNhs10484.31-12G41.26
eyeball, embryo E12.CNhs11016.345-16C614.57
eyeball, embryo E14.CNhs10521.399-16E211.50
eyeball, embryo E15.CNhs10593.426-16C97.74
eyeball, embryo E17.CNhs11023.1261-18D49.49
eyeball, neonate N00.CNhs11207.633-15C68.37
eyeball, neonate N01.CNhs11140.1532-43E712.04
eyeball, neonate N02.CNhs11205.1551-44G810.03
eyeball, neonate N16.CNhs11188.777-19A21.29
forelimb, embryo E11.CNhs10596.335-25E23.23
forelimb, embryo E12.CNhs10600.359-14H213.05
forelimb, embryo E13.CNhs10589.384-1E220.41
forelimb, embryo E14.CNhs10577.413-26A89.64
forelimb, embryo E15.CNhs11007.437-20E722.80
forelimb, embryo E17.CNhs10598.1517-43C45.92
forelimb, embryo E18.CNhs11008.1520-43B58.03
gonad, embryo E13.CNhs11044.1564-45I614.73
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E91.86
heart, embryo E12.CNhs11015.353-12F53.05
heart, embryo E13.CNhs11013.376-3I91.98
heart, embryo E14.CNhs10597.403-26D41.42
heart, embryo E15.CNhs11017.431-16C81.77
heart, embryo E16.CNhs11021.457-17C61.85
heart, embryo E17.CNhs11025.479-18E51.16
heart, embryo E18.CNhs11030.1283-20G31.34
heart, neonate N00.CNhs11213.639-21E30.58
heart, neonate N03.CNhs11221.1349-25I21.32
heart, neonate N10.CNhs11118.749-24G10.82
heart, neonate N16.CNhs11209.782-15G10.97
heart, neonate N20.CNhs11127.821-26I60.73
heart, neonate N25.CNhs11196.1351-25D30.66
heart, neonate N30.CNhs11202.1390-42D20.27
hippocampus, adult.CNhs10478.13-16E87.15
hippocampus, neonate N00.CNhs11228.627-43G13.81
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A32.38
intestine, embryo E12.CNhs11019.1251-16I55.33
intestine, embryo E13.CNhs11010.381-16D58.36
intestine, embryo E15.CNhs10602.976-16D83.61
intestine, embryo E16.CNhs10585.463-22H42.02
intestine, embryo E17.CNhs10582.482-18D32.00
intestine, embryo E18.CNhs10526.1289-20F72.09
intestine, neonate N00.CNhs11126.644-26D14.27
intestine, neonate N01.CNhs11192.1322-23E92.80
intestine, neonate N06.CNhs11102.688-20B82.01
intestine, neonate N07.CNhs11095.720-20F22.59
intestine, neonate N10.CNhs11098.755-23A53.90
intestine, neonate N20.CNhs11187.827-18D11.80
intestine, neonate N25.CNhs11121.1352-25E34.76
intestine, neonate N30.CNhs11131.1384-42G11.99
kidney, embryo E14.CNhs10606.411-4I92.66
kidney, embryo E15.CNhs10997.434-16F86.85
kidney, embryo E16.CNhs10584.464-22A57.89
kidney, embryo E17.CNhs11028.483-18I24.89
kidney, embryo E18.CNhs11001.1288-20C73.88
kidney, neonate N00.CNhs11214.646-21G72.45
kidney, neonate N10.CNhs11206.758-6D54.49
kidney, neonate N20.CNhs11113.832-19I10.30
kidney, neonate N25.CNhs11122.1353-25F30.63
kidney, neonate N30.CNhs11203.1385-42H10.25
liver, adult pregnant day01.CNhs10466.508-5B20.30
liver, embryo E12.CNhs10601.355-15F81.67
liver, embryo E13.CNhs10524.378-3H60.59
liver, embryo E14.CNhs10594.409-16E10.45
liver, embryo E15.CNhs10520.433-16D70.61
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.25
liver, embryo E18.CNhs10579.499-43G41.44
liver, neonate N00.CNhs11117.641-24F40.65
liver, neonate N03.CNhs11123.1345-25G20.27
liver, neonate N06.CNhs11101.684-20A81.44
liver, neonate N07.CNhs11103.716-20H20.74
liver, neonate N10.CNhs11115.751-24B91.25
liver, neonate N20.CNhs11220.823-25A30.25
liver, neonate N25.CNhs11198.1368-26H10.36
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B126.05
lung, embryo E12.CNhs10522.354-16G26.25
lung, embryo E14.CNhs10604.404-26F83.42
lung, embryo E15.CNhs11020.432-17C55.09
lung, embryo E16.CNhs10998.458-17B65.40
lung, embryo E17.CNhs10605.480-44A66.53
lung, embryo E18.CNhs10583.1287-20I68.57
lung, neonate N00.CNhs11224.640-42C613.07
lung, neonate N06.CNhs11212.683-20E524.12
lung, neonate N07.CNhs11111.715-19A319.93
lung, neonate N10.CNhs11219.750-23E617.38
lung, neonate N20.CNhs11109.822-18A422.61
lung, neonate N25.CNhs11119.1359-25C720.38
lung, neonate N30.CNhs11133.1394-42H236.16
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B61.48
mammary gland, adult pregnant day19.CNhs10476.588-5H24.41
medulla oblongata, adult.CNhs10477.17-12C25.94
medulla oblongata, neonate N30.CNhs11200.1396-42A35.39
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.33
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.25
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E11.58
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E22.73
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E31.29
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D78.60
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D88.91
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D97.64
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D44.05
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D54.97
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D63.56
olfactory brain, adult.CNhs10489.18-22I99.96
ovary, adult.CNhs10507.91-2I76.10
ovary, embryo E18.CNhs11040.505-44H78.90
ovary, neonate N00.CNhs11217.1299-22I48.63
oviduct, adult pregnant day01.CNhs10500.988-6G68.08
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F42.43
pancreas, embryo E15.CNhs11042.1556-45F20.60
pancreas, embryo E16.CNhs11003.460-26E50.38
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I73.69
pancreas, neonate N00.CNhs11105.645-26G91.29
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G81.70
pituitary gland, embryo E12.CNhs11018.346-16E612.24
pituitary gland, embryo E13.CNhs11009.370-44C74.14
pituitary gland, embryo E14.CNhs11037.398-44A511.36
pituitary gland, embryo E15.CNhs10592.427-16B97.45
pituitary gland, embryo E16.CNhs11036.449-43F69.10
pituitary gland, embryo E17.CNhs11039.1265-44F510.86
pituitary gland, neonate N00.CNhs11190.1308-22E92.13
placenta, adult pregnant day10.CNhs10472.539-13I70.47
placenta, adult pregnant day17.CNhs10464.577-18G30.64
prostate, adult.CNhs10470.859-1F80.66
skin, adult.CNhs10492.30-1C32.31
skin, neonate N00.CNhs11124.650-25G42.74
skin, neonate N03.CNhs11215.662-22H32.71
skin, neonate N06.CNhs11097.693-20I52.98
skin, neonate N10.CNhs11108.762-6C44.27
small intestine, neonate N16.CNhs11114.790-21I12.62
spinal cord, adult.CNhs10505.24-13C95.93
spleen, adult.CNhs10465.25-2G21.88
spleen, embryo E16.CNhs11035.461-43C10.62
spleen, embryo E18.CNhs11011.1271-21F20.19
spleen, neonate N10.CNhs11116.752-24D11.51
spleen, neonate N20.CNhs11112.824-19H10.68
spleen, neonate N25.CNhs11099.1354-25G30.69
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E33.64
stomach, embryo E15.CNhs10603.1252-16G89.56
stomach, embryo E16.CNhs11022.459-17D46.91
stomach, embryo E17.CNhs11006.1035-18D55.23
stomach, embryo E18.CNhs10999.1286-20C63.49
stomach, neonate N03.CNhs11193.1340-24B81.62
stomach, neonate N07.CNhs11210.718-18A92.15
stomach, neonate N25.CNhs11104.1355-25E40.79
stomach, neonate N30.CNhs11134.1386-42I11.56
submandibular gland, adult.CNhs10469.59-29C11.24
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F514.50
testis, embryo E15.CNhs11034.443-27C512.41
testis, embryo E16.CNhs11033.470-26G519.25
testis, embryo E17.CNhs11029.486-18I516.66
testis, embryo E18.CNhs11027.503-18G513.69
testis, neonate N00.CNhs11189.1300-22B712.91
testis, neonate N07.CNhs11222.726-26I41.43
testis, neonate N10.CNhs11204.763-44D90.21
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.32
thymus, embryo E14.CNhs11041.402-44I43.04
thymus, embryo E15.CNhs11005.430-45I23.08
thymus, embryo E16.CNhs11002.456-26C51.04
thymus, embryo E17.CNhs10581.478-18C10.54
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.20
thymus, neonate N07.CNhs11211.713-19D30.23
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.19
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.91
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E41.16
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E56.04
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F81.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A110.17
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A211.97
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A313.18
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D715.29
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A49.59
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A59.82
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A613.50
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A79.01
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A810.88
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A910.36
whole body, embryo E11.CNhs11014.324-5I80.83
whole body, embryo E12.CNhs10587.857-27C97.18
whole body, embryo E13.CNhs10512.372-23H29.73
whole body, embryo E14.5.CNhs10578.420-27D28.75
whole body, embryo E14.CNhs10519.395-14B13.77
whole body, embryo E16.CNhs10514.453-14F21.84
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G56.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G54.94
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G59.31
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G55.31
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G55.32
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G56.04
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G54.96
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G56.21
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G56.26
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G53.81
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G55.10
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G54.82
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G56.59
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G53.97
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G53.43
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G55.86
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G57.15
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G56.25
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G56.68
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G56.85
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G55.49
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G52.89
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G55.70
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G53.37
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G56.64
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G55.32
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G52.86
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G54.96
whole body, embryo E17.5.CNhs10513.490-9F95.02
whole body, embryo E17.CNhs10517.475-3I56.99
whole body, embryo E18.CNhs10516.493-3B34.68
whole body, neonate N00.CNhs10525.657-19C23.65
whole body, neonate N01.CNhs10576.659-23C60.77
whole body, neonate N06.CNhs10515.692-21D11.54
whole body, neonate N10.CNhs10518.761-6B41.62





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
ectoderm-derived structure9.68e-1995
ectoderm9.68e-1995
presumptive ectoderm9.68e-1995
nervous system3.04e-1775
central nervous system6.81e-1673
neurectoderm1.90e-1564
neural plate1.90e-1564
presumptive neural plate1.90e-1564
ecto-epithelium2.34e-1573
pre-chordal neural plate5.09e-1449
regional part of nervous system7.82e-1454
neural tube3.73e-1352
neural rod3.73e-1352
future spinal cord3.73e-1352
neural keel3.73e-1352
brain1.35e-1147
future brain1.35e-1147
anterior neural tube2.78e-1140
regional part of brain3.98e-1146
regional part of forebrain5.80e-1139
forebrain5.80e-1139
future forebrain5.80e-1139
gray matter5.27e-1034
brain grey matter2.91e-0829
regional part of telencephalon2.91e-0829
telencephalon2.91e-0829
structure with developmental contribution from neural crest8.30e-0892
lung1.90e-0714
respiratory tube1.90e-0714
respiration organ1.90e-0714
pair of lungs1.90e-0714
lung primordium1.90e-0714
lung bud1.90e-0714
embryo2.25e-07320
occipital lobe9.99e-0710
visual cortex9.99e-0710
neocortex9.99e-0710
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