FFCP PHASE1:Mm9::chr7:17545063..17545149,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=71691 | |EntrezGene=71691 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1 | |||
|TSSclassifier=NA | |||
|UniProt=Q80VM8 | |UniProt=Q80VM8 | ||
|association_with_transcript=0bp_to_ENSMUST00000038163,NM_001007569,uc009fip.1_5end | |association_with_transcript=0bp_to_ENSMUST00000038163,NM_001007569,uc009fip.1_5end | ||
|cluster_id=chr7:17545063..17545149,+ | |||
|description=CAGE_peak_1_at_Pnmal1_5end | |description=CAGE_peak_1_at_Pnmal1_5end | ||
|id=chr7:17545063..17545149,+ | |id=chr7:17545063..17545149,+ | ||
|ontology_enrichment_celltype=CL:0000117!9.25e-14!23;CL:0000337!9.25e-14!23;CL:0000540!1.62e-12!33;CL:0000047!1.62e-12!33;CL:0000031!1.62e-12!33;CL:0000404!1.62e-12!33;CL:0002319!1.86e-09!43;CL:0000221!2.60e-09!44;CL:0000133!2.60e-09!44;CL:0000393!3.84e-08!39;CL:0000211!3.84e-08!39 | |ontology_enrichment_celltype=CL:0000117!9.25e-14!23;CL:0000337!9.25e-14!23;CL:0000540!1.62e-12!33;CL:0000047!1.62e-12!33;CL:0000031!1.62e-12!33;CL:0000404!1.62e-12!33;CL:0002319!1.86e-09!43;CL:0000221!2.60e-09!44;CL:0000133!2.60e-09!44;CL:0000393!3.84e-08!39;CL:0000211!3.84e-08!39 | ||
|ontology_enrichment_celltype_v019_2=CL:0000117,4.64e-15,23;CL:0000337,4.64e-15,23;CL:0000540,4.67e-12,33;CL:0000047,4.67e-12,33;CL:0000031,4.67e-12,33;CL:0000404,4.67e-12,33;CL:0000393,2.64e-08,39;CL:0000211,2.64e-08,39;CL:0002319,7.42e-08,43;CL:0000221,2.07e-07,44;CL:0000133,2.07e-07,44 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!4.53e-33!71;UBERON:0003075!4.53e-33!71;UBERON:0007284!4.53e-33!71;UBERON:0001017!4.55e-30!73;UBERON:0005743!4.55e-30!73;UBERON:0000073!1.30e-28!75;UBERON:0001016!1.30e-28!75;UBERON:0001049!8.77e-28!52;UBERON:0005068!8.77e-28!52;UBERON:0006241!8.77e-28!52;UBERON:0007135!8.77e-28!52;UBERON:0000033!3.58e-27!63;UBERON:0000955!6.17e-27!50;UBERON:0006238!6.17e-27!50;UBERON:0002616!3.04e-26!49;UBERON:0004121!4.04e-26!102;UBERON:0000924!4.04e-26!102;UBERON:0006601!4.04e-26!102;UBERON:0003056!3.47e-25!49;UBERON:0003080!1.81e-22!40;UBERON:0002780!9.12e-22!39;UBERON:0001890!9.12e-22!39;UBERON:0006240!9.12e-22!39;UBERON:0002020!2.09e-19!34;UBERON:0002791!1.17e-16!29;UBERON:0003528!1.17e-16!29;UBERON:0001893!1.17e-16!29;UBERON:0007811!3.96e-13!86;UBERON:0000956!1.26e-11!21;UBERON:0001869!1.26e-11!21;UBERON:0000203!1.26e-11!21;UBERON:0000153!4.16e-11!94;UBERON:0002619!1.19e-09!17;UBERON:0002021!2.35e-08!10;UBERON:0000411!2.35e-08!10;UBERON:0001950!2.35e-08!10 | |ontology_enrichment_uberon=UBERON:0002346!4.53e-33!71;UBERON:0003075!4.53e-33!71;UBERON:0007284!4.53e-33!71;UBERON:0001017!4.55e-30!73;UBERON:0005743!4.55e-30!73;UBERON:0000073!1.30e-28!75;UBERON:0001016!1.30e-28!75;UBERON:0001049!8.77e-28!52;UBERON:0005068!8.77e-28!52;UBERON:0006241!8.77e-28!52;UBERON:0007135!8.77e-28!52;UBERON:0000033!3.58e-27!63;UBERON:0000955!6.17e-27!50;UBERON:0006238!6.17e-27!50;UBERON:0002616!3.04e-26!49;UBERON:0004121!4.04e-26!102;UBERON:0000924!4.04e-26!102;UBERON:0006601!4.04e-26!102;UBERON:0003056!3.47e-25!49;UBERON:0003080!1.81e-22!40;UBERON:0002780!9.12e-22!39;UBERON:0001890!9.12e-22!39;UBERON:0006240!9.12e-22!39;UBERON:0002020!2.09e-19!34;UBERON:0002791!1.17e-16!29;UBERON:0003528!1.17e-16!29;UBERON:0001893!1.17e-16!29;UBERON:0007811!3.96e-13!86;UBERON:0000956!1.26e-11!21;UBERON:0001869!1.26e-11!21;UBERON:0000203!1.26e-11!21;UBERON:0000153!4.16e-11!94;UBERON:0002619!1.19e-09!17;UBERON:0002021!2.35e-08!10;UBERON:0000411!2.35e-08!10;UBERON:0001950!2.35e-08!10 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002346,1.79e-32,64;UBERON:0003075,1.79e-32,64;UBERON:0007284,1.79e-32,64;UBERON:0000073,1.67e-30,54;UBERON:0001017,2.05e-29,73;UBERON:0001049,7.30e-29,52;UBERON:0005068,7.30e-29,52;UBERON:0006241,7.30e-29,52;UBERON:0007135,7.30e-29,52;UBERON:0001016,8.90e-28,75;UBERON:0003056,1.12e-26,49;UBERON:0000955,1.13e-25,47;UBERON:0006238,1.13e-25,47;UBERON:0010371,2.51e-25,73;UBERON:0002616,6.23e-25,46;UBERON:0004121,6.72e-24,95;UBERON:0000924,6.72e-24,95;UBERON:0006601,6.72e-24,95;UBERON:0003080,1.22e-23,40;UBERON:0002780,7.21e-23,39;UBERON:0001890,7.21e-23,39;UBERON:0006240,7.21e-23,39;UBERON:0002020,2.95e-20,34;UBERON:0010314,5.64e-20,92;UBERON:0003528,3.17e-17,29;UBERON:0002791,3.17e-17,29;UBERON:0001893,3.17e-17,29;UBERON:0000956,1.03e-11,21;UBERON:0001869,1.03e-11,21;UBERON:0000203,1.03e-11,21;UBERON:0002619,1.53e-09,17;UBERON:0002021,4.42e-09,10;UBERON:0000411,4.42e-09,10;UBERON:0001950,4.42e-09,10;UBERON:0002420,8.09e-07,8;UBERON:0007245,8.09e-07,8;UBERON:0010009,8.09e-07,8;UBERON:0010011,8.09e-07,8;UBERON:0000454,8.09e-07,8 | |||
|phase1_expression=1.12104192973356,0,0,0,0,1.6787927191189,1.86890112476421,0,0,0,0,0,0,0,0,0,0,0,0,0,17.093701320365,0,0,0.319984845586813,0.45881856213434,0,0,0.215471232685889,0,0,0.221730510655305,0,0,0,0.288851619751275,0.166234645358492,0,0,0,0,0,0,0,0,0,0,0.782391344348039,1.74420125104357,0.219686182734472,0.388859798148567,0.279972843250725,0,0,0,0,0,0,0,50.9837481366186,62.9499265333719,42.466704034914,0.338844532069132,0,0,0,0,2.39680088414724,1.15265491596466,16.279269132431,18.0907957364465,14.9330722559481,37.7059299413021,45.719787976984,23.885705846916,23.7696768125226,21.1420320920305,69.3730050296149,68.1850385374902,83.5619540913964,87.0449499019279,81.6984657369518,78.137005583514,60.3035277842983,104.111082855861,97.1796855860512,42.4265163082082,41.2877874317399,37.839087502536,0,0.151143120213571,0,0,0,0.539703191637817,0,0,3.93244376368905,0,0,0,0.704217098883403,0,0,0,0,0,0,2.96878087269556,0,5.64080128446334,5.55153045651635,7.91610243611567,7.61031140944993,11.1534754008941,7.4080885495494,3.39299796590124,0,0,0,0.161766849947409,0,0,1.86391761218122,30.7419836862124,26.3902850584953,1.27728527604296,0,0,0,87.9271053306309,91.5001205637253,32.1675141408933,108.814024440365,123.254850433219,91.2189515616469,98.4804466821289,1.62942982160506,0,0,3.57751155007006,7.026503919986,7.12696523743766,9.00310649026746,7.38453607395004,10.1374383735478,12.9394857487698,7.30873451565885,11.6416516832557,1.07783996466421,1.13463648100692,0.527853372491847,1.09597866213787,0,0,0,2.38841120182192,0,0,0,0.207125772535502,0.234526059981096,0.180062061461015,0.23674473558521,0.393528463494808,0.154267112887378,0,0,0,0.16455984991348,0,0,0.146199987425332,0,0,123.019619910014,45.2780294468851,0,1.58670339998127,1.91959425481711,1.85789337488351,1.67527699718721,1.61346819698674,2.00140239460383,1.33157938278791,0.949058123089023,2.30578536613615,2.76468729680296,2.78539060857611,2.33956904542944,0.898819408654221,0.864552199498777,0.796565093017469,1.70701110857774,2.51346727741403,0,0,0.193952487167626,0.210407459670956,0,0,0,0,0,0.166845105716094,0,0,0,0,0,0,0,0,0,0.372140947668503,0,0,0,0,0,0.757965647081939,0,0.339490171550376,0,0,0,0,0,0,0,0,0.172684981865896,0,0,0,0,0,51.5367393860812,48.9944849955409,0,0,2.2085575359138,3.12350995437311,6.46270193198397,0.955875191810208,0.891194696329576,0.566153061577665,1.61924280669958,3.79932615284705,5.13874111330481,80.00900778903,0.425820255624806,4.62970569534864,2.28041743095006,0.164970122972535,2.65490276679926,5.82673526771955,5.13950046840077,3.58349651536206,5.02013217897314,3.99665692327106,3.6179961043551,7.99774204850512,3.20847640546249,2.52829406348653,1.05418608574999,0,50.0446220458068,9.72329907769075,11.6422815404479,9.21649250635847,13.3005175231705,19.9773075714319,30.4415688113924,35.0134691481789,0,0,0.882113592219848,0,0,0,0,0,0.874442509889552,39.6810146302491,0,0.82554747185289,0.555583582109135,0,0,0,0,0,0,0,1.42351197111511,1.01659733563424,1.83609079397062,2.29997125615916,2.62035076495413,1.88810084938749,2.0663363931334,1.57053565190418,1.03691978633434,0,1.69107881605257,4.78452947340732,5.46013018508422,6.22243802700952,7.74958940866387,7.94093789806657,5.04636126176742,1.5624526181274,1.15345278868282,1.44950472495604,2.59227005632079,0,0.405450430580328,0.308132871494482,0.389762468933385,0.358053391334963,0,0.120195449519969,0.147689527174577,0,0,0,0,0,0,0,0,0,0,1.35232715822533,0.187682475451182,0.36630324853453,0,0,99.3963243006037,81.9378920982775,106.558565499728,80.4272893368458,126.055183637798,98.9566005580508,126.904230043579,125.189294496333,111.926175019099,107.694144844379,5.60451676954554,7.18244772121856,5.63420898988643,5.10524105843418,13.2056292455629,9.55986243940074,10.0011027510727,7.0051919461224,6.09746498224449,6.57012750585873,5.0695859978048,9.43131706930381,6.08669798554236,7.61899313617944,7.17943361945166,7.62069906052918,6.60540657885676,7.7163688185482,10.3021475200827,4.71036544430071,3.77156177623957,7.0990322463735,8.82213902805088,7.26732083161643,9.31682866111773,8.630690004951,6.76833499629258,9.2074399003245,6.51859746460137,7.85599180320834,5.69448086996036,6.69830480153832,7.7753898202241,6.50734732981057,4.43685205256625,16.2376875659665,10.0590591631526,4.72716318906256,1.53030665655075,0.441182838239031,0.927471342481686 | |phase1_expression=1.12104192973356,0,0,0,0,1.6787927191189,1.86890112476421,0,0,0,0,0,0,0,0,0,0,0,0,0,17.093701320365,0,0,0.319984845586813,0.45881856213434,0,0,0.215471232685889,0,0,0.221730510655305,0,0,0,0.288851619751275,0.166234645358492,0,0,0,0,0,0,0,0,0,0,0.782391344348039,1.74420125104357,0.219686182734472,0.388859798148567,0.279972843250725,0,0,0,0,0,0,0,50.9837481366186,62.9499265333719,42.466704034914,0.338844532069132,0,0,0,0,2.39680088414724,1.15265491596466,16.279269132431,18.0907957364465,14.9330722559481,37.7059299413021,45.719787976984,23.885705846916,23.7696768125226,21.1420320920305,69.3730050296149,68.1850385374902,83.5619540913964,87.0449499019279,81.6984657369518,78.137005583514,60.3035277842983,104.111082855861,97.1796855860512,42.4265163082082,41.2877874317399,37.839087502536,0,0.151143120213571,0,0,0,0.539703191637817,0,0,3.93244376368905,0,0,0,0.704217098883403,0,0,0,0,0,0,2.96878087269556,0,5.64080128446334,5.55153045651635,7.91610243611567,7.61031140944993,11.1534754008941,7.4080885495494,3.39299796590124,0,0,0,0.161766849947409,0,0,1.86391761218122,30.7419836862124,26.3902850584953,1.27728527604296,0,0,0,87.9271053306309,91.5001205637253,32.1675141408933,108.814024440365,123.254850433219,91.2189515616469,98.4804466821289,1.62942982160506,0,0,3.57751155007006,7.026503919986,7.12696523743766,9.00310649026746,7.38453607395004,10.1374383735478,12.9394857487698,7.30873451565885,11.6416516832557,1.07783996466421,1.13463648100692,0.527853372491847,1.09597866213787,0,0,0,2.38841120182192,0,0,0,0.207125772535502,0.234526059981096,0.180062061461015,0.23674473558521,0.393528463494808,0.154267112887378,0,0,0,0.16455984991348,0,0,0.146199987425332,0,0,123.019619910014,45.2780294468851,0,1.58670339998127,1.91959425481711,1.85789337488351,1.67527699718721,1.61346819698674,2.00140239460383,1.33157938278791,0.949058123089023,2.30578536613615,2.76468729680296,2.78539060857611,2.33956904542944,0.898819408654221,0.864552199498777,0.796565093017469,1.70701110857774,2.51346727741403,0,0,0.193952487167626,0.210407459670956,0,0,0,0,0,0.166845105716094,0,0,0,0,0,0,0,0,0,0.372140947668503,0,0,0,0,0,0.757965647081939,0,0.339490171550376,0,0,0,0,0,0,0,0,0.172684981865896,0,0,0,0,0,51.5367393860812,48.9944849955409,0,0,2.2085575359138,3.12350995437311,6.46270193198397,0.955875191810208,0.891194696329576,0.566153061577665,1.61924280669958,3.79932615284705,5.13874111330481,80.00900778903,0.425820255624806,4.62970569534864,2.28041743095006,0.164970122972535,2.65490276679926,5.82673526771955,5.13950046840077,3.58349651536206,5.02013217897314,3.99665692327106,3.6179961043551,7.99774204850512,3.20847640546249,2.52829406348653,1.05418608574999,0,50.0446220458068,9.72329907769075,11.6422815404479,9.21649250635847,13.3005175231705,19.9773075714319,30.4415688113924,35.0134691481789,0,0,0.882113592219848,0,0,0,0,0,0.874442509889552,39.6810146302491,0,0.82554747185289,0.555583582109135,0,0,0,0,0,0,0,1.42351197111511,1.01659733563424,1.83609079397062,2.29997125615916,2.62035076495413,1.88810084938749,2.0663363931334,1.57053565190418,1.03691978633434,0,1.69107881605257,4.78452947340732,5.46013018508422,6.22243802700952,7.74958940866387,7.94093789806657,5.04636126176742,1.5624526181274,1.15345278868282,1.44950472495604,2.59227005632079,0,0.405450430580328,0.308132871494482,0.389762468933385,0.358053391334963,0,0.120195449519969,0.147689527174577,0,0,0,0,0,0,0,0,0,0,1.35232715822533,0.187682475451182,0.36630324853453,0,0,99.3963243006037,81.9378920982775,106.558565499728,80.4272893368458,126.055183637798,98.9566005580508,126.904230043579,125.189294496333,111.926175019099,107.694144844379,5.60451676954554,7.18244772121856,5.63420898988643,5.10524105843418,13.2056292455629,9.55986243940074,10.0011027510727,7.0051919461224,6.09746498224449,6.57012750585873,5.0695859978048,9.43131706930381,6.08669798554236,7.61899313617944,7.17943361945166,7.62069906052918,6.60540657885676,7.7163688185482,10.3021475200827,4.71036544430071,3.77156177623957,7.0990322463735,8.82213902805088,7.26732083161643,9.31682866111773,8.630690004951,6.76833499629258,9.2074399003245,6.51859746460137,7.85599180320834,5.69448086996036,6.69830480153832,7.7753898202241,6.50734732981057,4.43685205256625,16.2376875659665,10.0590591631526,4.72716318906256,1.53030665655075,0.441182838239031,0.927471342481686 | ||
|short_description=p1@Pnmal1 | |short_description=p1@Pnmal1 | ||
}} | }} |
Latest revision as of 07:24, 26 September 2015
Short description: | p1@Pnmal1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Pnmal1_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 0bp_to_ENSMUST00000038163, NM_001007569, uc009fip.1_5end |
EntrezGene: | Pnmal1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 4.64e-15 | 23 |
neuroblast (sensu Vertebrata) | 4.64e-15 | 23 |
neuron | 4.67e-12 | 33 |
neuronal stem cell | 4.67e-12 | 33 |
neuroblast | 4.67e-12 | 33 |
electrically signaling cell | 4.67e-12 | 33 |
electrically responsive cell | 2.64e-08 | 39 |
electrically active cell | 2.64e-08 | 39 |
neural cell | 7.42e-08 | 43 |
ectodermal cell | 2.07e-07 | 44 |
neurectodermal cell | 2.07e-07 | 44 |