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FFCP PHASE1:Mm9::chr4:125167652..125167700,+: Difference between revisions

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{{FFCP
{{FFCP
|id=chr4:125167652..125167700,+
|DHSsupport=NA
|short_description=p1@Grik3
|DPIdataset=NA
|description=CAGE_peak_1_at_Grik3_5end
|association_with_transcript=-243bp_to_ENSMUST00000030676_5end
|EntrezGene=14807
|EntrezGene=14807
|HGNC=
|HGNC=
|MCL_coexpression_id=593
|TSSclassifier=NA
|UniProt=B1AS29
|UniProt=B1AS29
|association_with_transcript=-243bp_to_ENSMUST00000030676_5end
|cluster_id=chr4:125167652..125167700,+
|description=CAGE_peak_1_at_Grik3_5end
|id=chr4:125167652..125167700,+
|ontology_enrichment_celltype=CL:0000540!2.03e-22!33;CL:0000047!2.03e-22!33;CL:0000031!2.03e-22!33;CL:0000404!2.03e-22!33;CL:0000221!5.98e-19!44;CL:0000133!5.98e-19!44;CL:0002319!7.18e-19!43;CL:0000393!4.36e-16!39;CL:0000211!4.36e-16!39;CL:0000117!7.32e-16!23;CL:0000337!7.32e-16!23;CL:0000055!1.81e-13!50;CL:0000107!3.90e-08!9
|ontology_enrichment_celltype_v019_2=CL:0000540,1.76e-27,33;CL:0000047,1.76e-27,33;CL:0000031,1.76e-27,33;CL:0000404,1.76e-27,33;CL:0002319,4.41e-22,43;CL:0000221,3.06e-21,44;CL:0000133,3.06e-21,44;CL:0000393,4.57e-21,39;CL:0000211,4.57e-21,39;CL:0000117,8.97e-20,23;CL:0000337,8.97e-20,23;CL:0000107,6.20e-10,9;CL:0002321,2.32e-08,70;CL:0002609,3.90e-07,6
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001017!4.18e-37!73;UBERON:0005743!4.18e-37!73;UBERON:0000073!4.55e-37!75;UBERON:0001016!4.55e-37!75;UBERON:0004121!3.26e-33!102;UBERON:0000924!3.26e-33!102;UBERON:0006601!3.26e-33!102;UBERON:0001049!1.35e-24!52;UBERON:0005068!1.35e-24!52;UBERON:0006241!1.35e-24!52;UBERON:0007135!1.35e-24!52;UBERON:0002346!6.38e-24!71;UBERON:0003075!6.38e-24!71;UBERON:0007284!6.38e-24!71;UBERON:0000033!4.70e-23!63;UBERON:0000955!4.91e-23!50;UBERON:0006238!4.91e-23!50;UBERON:0002616!2.53e-22!49;UBERON:0003056!2.60e-21!49;UBERON:0003080!1.15e-20!40;UBERON:0002780!3.52e-20!39;UBERON:0001890!3.52e-20!39;UBERON:0006240!3.52e-20!39;UBERON:0002020!1.42e-19!34;UBERON:0002791!3.75e-16!29;UBERON:0003528!3.75e-16!29;UBERON:0001893!3.75e-16!29;UBERON:0000956!2.94e-11!21;UBERON:0001869!2.94e-11!21;UBERON:0000203!2.94e-11!21;UBERON:0007811!1.90e-10!86;UBERON:0000153!2.97e-09!94;UBERON:0002619!1.36e-08!17;UBERON:0002410!3.90e-08!9;UBERON:0000010!1.19e-07!11;UBERON:0002021!8.68e-07!10;UBERON:0000411!8.68e-07!10;UBERON:0001950!8.68e-07!10
|ontology_enrichment_uberon_v019_2=UBERON:0001017,7.44e-46,73;UBERON:0001016,4.33e-45,75;UBERON:0004121,7.53e-38,95;UBERON:0000924,7.53e-38,95;UBERON:0006601,7.53e-38,95;UBERON:0000073,8.67e-33,54;UBERON:0002346,7.34e-32,64;UBERON:0003075,7.34e-32,64;UBERON:0007284,7.34e-32,64;UBERON:0001049,4.34e-31,52;UBERON:0005068,4.34e-31,52;UBERON:0006241,4.34e-31,52;UBERON:0007135,4.34e-31,52;UBERON:0010371,3.64e-28,73;UBERON:0000955,4.41e-27,47;UBERON:0006238,4.41e-27,47;UBERON:0002616,3.48e-26,46;UBERON:0003080,1.65e-25,40;UBERON:0002780,6.92e-25,39;UBERON:0001890,6.92e-25,39;UBERON:0006240,6.92e-25,39;UBERON:0002020,4.25e-24,34;UBERON:0003056,7.62e-23,49;UBERON:0003528,9.58e-20,29;UBERON:0002791,9.58e-20,29;UBERON:0001893,9.58e-20,29;UBERON:0010314,7.19e-16,92;UBERON:0000956,1.57e-13,21;UBERON:0001869,1.57e-13,21;UBERON:0000203,1.57e-13,21;UBERON:0002619,3.69e-10,17;UBERON:0002410,6.20e-10,9;UBERON:0000010,1.34e-08,11;UBERON:0002021,3.18e-08,10;UBERON:0000411,3.18e-08,10;UBERON:0001950,3.18e-08,10;UBERON:0002420,1.86e-07,8;UBERON:0007245,1.86e-07,8;UBERON:0010009,1.86e-07,8;UBERON:0010011,1.86e-07,8;UBERON:0000454,1.86e-07,8
|phase1_expression=0.160148847104794,0,0,0,0,0,0.467225281191051,0,0,0,0,0,0,0,0,0,0,0,0,0,1.9559956734746,0,0,0,0,0,0,0.215471232685889,0.190023419456374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219686182734472,0,0.139986421625363,1.43752564364972,0,0,0,0,0,0,13.5552028775931,11.1088105647127,12.6766280701236,0,0,0,0,0,3.59520132622086,2.68952813725088,27.4777472617466,30.3763361246304,28.1835448210852,16.8534080798244,13.4729809980484,31.970098595103,39.3924885884951,36.7687514644008,7.70811166995721,7.15049093277051,7.0659005297872,34.8179799607712,31.1972864684217,22.3992749339407,8.93385596804419,5.06486349028512,10.8486755921535,22.9810296669461,15.6608848879013,22.927131836512,0.227178579999552,1.51143120213571,0,0,0,0,0,0,0.561777680527007,0,0,0,0.985903938436763,0,0,0,0,0,0,0.22836775943812,0,0.29688427812965,0,0,0.691846491768175,0,0,0,0,0,0,0,0,0,0,10.8328894894272,9.84399522023239,0,0,0,0,6.5907881338122,9.15001205637253,25.2565247746857,11.8200537730748,9.71718737855256,8.10373373782284,6.97637431191358,0.203678727700633,0.124406970610093,0,0.210441855886474,0.260240885925407,0.459804208866946,0.360124259610698,1.35634336052144,3.46986145671772,4.86832137082429,10.3071897015702,0.258703370739016,0,0.378212160335639,0.351902248327898,0,0.278047249225598,0.348252166522167,0,0.59710280045548,0,0,0,0,0,0.180062061461015,0,0,0.308534225774757,0,0.268273401399619,0,0,0,0,0,0,0,4.41608891984667,12.0398396483763,0,0.264450566663544,0.639864751605702,2.09013004674395,1.41754207454303,0.80673409849337,0.22237804384487,0.380451252225118,0,0.329397909448022,0.251335208800269,0.397912944082302,0,0,0,0.199141273254367,0,0.228497025219458,0,0,0,0.0701358198903186,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37898282354097,0.162964976442026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.551873492609465,4.97706828962155,4.45404409050372,0,0,39.7540356464483,41.3865068954437,48.9011112853454,22.2240982095873,27.1814382380521,30.5722653251939,35.6233417473907,27.4720506436633,31.6230222357219,21.8498495166829,2.55492153374884,1.95872164033981,0.325773918707152,0.164970122972535,0,0.242780636154981,0,0,0,0,0.258428293168221,0,0.712994756769443,0,0,0,9.53230896110606,1.62054984628179,3.88076051348264,2.7863814554107,5.49754724291048,4.45922044005176,7.73380396829969,6.08929898229199,0,0.21183207086382,0.220528398054962,0.65954501176592,0.484393280087717,1.20625849856312,2.50681922406587,2.1338316966858,0.874442509889552,2.96680483216816,0,0,0,0,0,0,0,0,0,0,2.21435195506795,2.03319467126849,1.18805874903981,0.627264888043406,0.436725127492355,0.134864346384821,0.165306911450672,0,0.518459893167171,0.621339313086926,0,0,0,0,0.516639293910924,0,0,0,0.838874755405687,0.483168241652012,0.288030006257865,0,0,0,0,0,0,0,0,0,0,0.100826185136841,0,0,0,0,2.88581739386284,1.52513556236109,0.671538465456314,0,0,0,0.214368379079066,0,7.90652579663893,11.5081309126794,10.3121192419091,10.3111909406213,10.2762377965596,6.0431511791176,12.1504050041725,11.2580300806055,9.06284817968409,16.5683299760582,0.31136204275253,5.1873233542134,5.46347538413229,4.37592090722929,2.30574478890781,1.65459157605013,4.00044110042907,3.09052585858341,4.49286893428541,4.80124702351215,3.29523089857312,4.14977951049368,4.40115085108447,3.52138338226781,3.27382173046996,3.81034953026459,2.78122382267653,3.08654752741928,2.88460130562315,3.67997300335993,2.40008476669791,1.77475806159337,4.05341522910446,2.76158191601424,4.32903149910521,3.63842813934209,1.64635175585495,2.10455769150274,3.53090695999241,3.36685362994643,2.49133538060766,2.65962102414021,3.27384834535751,3.71848418846318,3.2794123866794,8.74337022782811,1.63752125911786,2.14871054048298,0.382576664137687,0.661774257358546,0.695603506861264
|phase1_expression=0.160148847104794,0,0,0,0,0,0.467225281191051,0,0,0,0,0,0,0,0,0,0,0,0,0,1.9559956734746,0,0,0,0,0,0,0.215471232685889,0.190023419456374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219686182734472,0,0.139986421625363,1.43752564364972,0,0,0,0,0,0,13.5552028775931,11.1088105647127,12.6766280701236,0,0,0,0,0,3.59520132622086,2.68952813725088,27.4777472617466,30.3763361246304,28.1835448210852,16.8534080798244,13.4729809980484,31.970098595103,39.3924885884951,36.7687514644008,7.70811166995721,7.15049093277051,7.0659005297872,34.8179799607712,31.1972864684217,22.3992749339407,8.93385596804419,5.06486349028512,10.8486755921535,22.9810296669461,15.6608848879013,22.927131836512,0.227178579999552,1.51143120213571,0,0,0,0,0,0,0.561777680527007,0,0,0,0.985903938436763,0,0,0,0,0,0,0.22836775943812,0,0.29688427812965,0,0,0.691846491768175,0,0,0,0,0,0,0,0,0,0,10.8328894894272,9.84399522023239,0,0,0,0,6.5907881338122,9.15001205637253,25.2565247746857,11.8200537730748,9.71718737855256,8.10373373782284,6.97637431191358,0.203678727700633,0.124406970610093,0,0.210441855886474,0.260240885925407,0.459804208866946,0.360124259610698,1.35634336052144,3.46986145671772,4.86832137082429,10.3071897015702,0.258703370739016,0,0.378212160335639,0.351902248327898,0,0.278047249225598,0.348252166522167,0,0.59710280045548,0,0,0,0,0,0.180062061461015,0,0,0.308534225774757,0,0.268273401399619,0,0,0,0,0,0,0,4.41608891984667,12.0398396483763,0,0.264450566663544,0.639864751605702,2.09013004674395,1.41754207454303,0.80673409849337,0.22237804384487,0.380451252225118,0,0.329397909448022,0.251335208800269,0.397912944082302,0,0,0,0.199141273254367,0,0.228497025219458,0,0,0,0.0701358198903186,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37898282354097,0.162964976442026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.551873492609465,4.97706828962155,4.45404409050372,0,0,39.7540356464483,41.3865068954437,48.9011112853454,22.2240982095873,27.1814382380521,30.5722653251939,35.6233417473907,27.4720506436633,31.6230222357219,21.8498495166829,2.55492153374884,1.95872164033981,0.325773918707152,0.164970122972535,0,0.242780636154981,0,0,0,0,0.258428293168221,0,0.712994756769443,0,0,0,9.53230896110606,1.62054984628179,3.88076051348264,2.7863814554107,5.49754724291048,4.45922044005176,7.73380396829969,6.08929898229199,0,0.21183207086382,0.220528398054962,0.65954501176592,0.484393280087717,1.20625849856312,2.50681922406587,2.1338316966858,0.874442509889552,2.96680483216816,0,0,0,0,0,0,0,0,0,0,2.21435195506795,2.03319467126849,1.18805874903981,0.627264888043406,0.436725127492355,0.134864346384821,0.165306911450672,0,0.518459893167171,0.621339313086926,0,0,0,0,0.516639293910924,0,0,0,0.838874755405687,0.483168241652012,0.288030006257865,0,0,0,0,0,0,0,0,0,0,0.100826185136841,0,0,0,0,2.88581739386284,1.52513556236109,0.671538465456314,0,0,0,0.214368379079066,0,7.90652579663893,11.5081309126794,10.3121192419091,10.3111909406213,10.2762377965596,6.0431511791176,12.1504050041725,11.2580300806055,9.06284817968409,16.5683299760582,0.31136204275253,5.1873233542134,5.46347538413229,4.37592090722929,2.30574478890781,1.65459157605013,4.00044110042907,3.09052585858341,4.49286893428541,4.80124702351215,3.29523089857312,4.14977951049368,4.40115085108447,3.52138338226781,3.27382173046996,3.81034953026459,2.78122382267653,3.08654752741928,2.88460130562315,3.67997300335993,2.40008476669791,1.77475806159337,4.05341522910446,2.76158191601424,4.32903149910521,3.63842813934209,1.64635175585495,2.10455769150274,3.53090695999241,3.36685362994643,2.49133538060766,2.65962102414021,3.27384834535751,3.71848418846318,3.2794123866794,8.74337022782811,1.63752125911786,2.14871054048298,0.382576664137687,0.661774257358546,0.695603506861264
|short_description=p1@Grik3
}}
}}

Latest revision as of 08:08, 26 September 2015

Short description:p1@Grik3
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Grik3_5end
Coexpression cluster:MCL_coexpression_mm9:593
Association with transcript: -243bp_to_ENSMUST00000030676_5end
EntrezGene:Grik3
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Grik3

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.16
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.47
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.96
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.22
Ileum epithelium, pool1.CNhs13199.10252-104B90.19
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.22
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.14
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C313.56
Mouse Granule cells, donor2.CNhs12357.11731-123E311.11
Mouse Granule cells, donor3.CNhs12108.11636-122C712.68
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C83.60
Mouse Microglia, donor2.CNhs12634.11736-123E82.69
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D527.48
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F530.38
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D928.18
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F116.85
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D513.47
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D231.97
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F239.39
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D636.77
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D37.71
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F37.15
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D77.07
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D434.82
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F431.20
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D822.40
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E48.93
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E55.06
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I610.85
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D622.98
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F615.66
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E122.93
Mouse Schwann, donor1.CNhs12507.11728-123D90.23
Mouse Schwann, donor2.CNhs12573.11746-123F91.51
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.56
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.99
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.23
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.30
adrenal gland, embryo E14.CNhs11038.406-44C50.00
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.69
adrenal gland, embryo E18.CNhs11026.1262-18F50.00
adrenal gland, neonate N00.CNhs11191.1311-23C10.00
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B210.83
cerebellum, neonate N30.CNhs11135.1395-42I29.84
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A46.59
corpus striatum, adult.CNhs10487.19-21D89.15
corpus striatum, neonate N00.CNhs11226.630-43F125.26
cortex, adult.CNhs10473.12-14D511.82
cortex, neonate N30.CNhs11107.1392-42F29.72
diencephalon, adult.CNhs10482.20-12F28.10
diencephalon, neonate N30.CNhs11201.1388-42B26.98
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.20
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.12
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.21
eyeball, embryo E12.CNhs11016.345-16C60.26
eyeball, embryo E14.CNhs10521.399-16E20.46
eyeball, embryo E15.CNhs10593.426-16C90.36
eyeball, embryo E17.CNhs11023.1261-18D41.36
eyeball, neonate N00.CNhs11207.633-15C63.47
eyeball, neonate N01.CNhs11140.1532-43E74.87
eyeball, neonate N02.CNhs11205.1551-44G810.31
eyeball, neonate N16.CNhs11188.777-19A20.26
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.38
forelimb, embryo E13.CNhs10589.384-1E20.35
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.28
forelimb, embryo E17.CNhs10598.1517-43C40.35
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.60
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.18
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.31
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.27
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E84.42
hippocampus, neonate N00.CNhs11228.627-43G112.04
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.26
intestine, embryo E12.CNhs11019.1251-16I50.64
intestine, embryo E13.CNhs11010.381-16D52.09
intestine, embryo E15.CNhs10602.976-16D81.42
intestine, embryo E16.CNhs10585.463-22H40.81
intestine, embryo E17.CNhs10582.482-18D30.22
intestine, embryo E18.CNhs10526.1289-20F70.38
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.33
intestine, neonate N06.CNhs11102.688-20B80.25
intestine, neonate N07.CNhs11095.720-20F20.40
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.20
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.23
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.07
kidney, neonate N10.CNhs11206.758-6D50.06
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.38
lung, embryo E14.CNhs10604.404-26F80.16
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.55
medulla oblongata, adult.CNhs10477.17-12C24.98
medulla oblongata, neonate N30.CNhs11200.1396-42A34.45
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E139.75
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E241.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E348.90
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D722.22
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D827.18
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D930.57
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D435.62
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D527.47
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D631.62
olfactory brain, adult.CNhs10489.18-22I921.85
ovary, adult.CNhs10507.91-2I72.55
ovary, embryo E18.CNhs11040.505-44H71.96
ovary, neonate N00.CNhs11217.1299-22I40.33
oviduct, adult pregnant day01.CNhs10500.988-6G60.16
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.24
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.26
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.71
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G89.53
pituitary gland, embryo E12.CNhs11018.346-16E61.62
pituitary gland, embryo E13.CNhs11009.370-44C73.88
pituitary gland, embryo E14.CNhs11037.398-44A52.79
pituitary gland, embryo E15.CNhs10592.427-16B95.50
pituitary gland, embryo E16.CNhs11036.449-43F64.46
pituitary gland, embryo E17.CNhs11039.1265-44F57.73
pituitary gland, neonate N00.CNhs11190.1308-22E96.09
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.21
prostate, adult.CNhs10470.859-1F80.22
skin, adult.CNhs10492.30-1C30.66
skin, neonate N00.CNhs11124.650-25G40.48
skin, neonate N03.CNhs11215.662-22H31.21
skin, neonate N06.CNhs11097.693-20I52.51
skin, neonate N10.CNhs11108.762-6C42.13
small intestine, neonate N16.CNhs11114.790-21I10.87
spinal cord, adult.CNhs10505.24-13C92.97
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E32.21
stomach, embryo E15.CNhs10603.1252-16G82.03
stomach, embryo E16.CNhs11022.459-17D41.19
stomach, embryo E17.CNhs11006.1035-18D50.63
stomach, embryo E18.CNhs10999.1286-20C60.44
stomach, neonate N03.CNhs11193.1340-24B80.13
stomach, neonate N07.CNhs11210.718-18A90.17
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.52
submandibular gland, adult.CNhs10469.59-29C10.62
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.52
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.00
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.84
testis, neonate N20.CNhs11110.839-18H30.48
testis, neonate N30.CNhs11130.1391-42E20.29
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.10
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H32.89
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F71.53
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.67
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.21
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A17.91
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A211.51
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A310.31
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D710.31
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A410.28
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A56.04
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A612.15
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A711.26
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A89.06
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A916.57
whole body, embryo E11.CNhs11014.324-5I80.31
whole body, embryo E12.CNhs10587.857-27C95.19
whole body, embryo E13.CNhs10512.372-23H25.46
whole body, embryo E14.5.CNhs10578.420-27D24.38
whole body, embryo E14.CNhs10519.395-14B12.31
whole body, embryo E16.CNhs10514.453-14F21.65
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G54.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G53.09
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G54.49
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G54.80
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G53.30
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G54.15
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G54.40
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G53.52
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G53.27
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G53.81
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G52.78
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G53.09
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G52.88
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G53.68
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G52.40
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.77
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G54.05
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G52.76
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G54.33
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G53.64
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.65
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G52.10
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G53.53
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G53.37
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G52.49
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G52.66
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G53.27
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G53.72
whole body, embryo E17.5.CNhs10513.490-9F93.28
whole body, embryo E17.CNhs10517.475-3I58.74
whole body, embryo E18.CNhs10516.493-3B31.64
whole body, neonate N00.CNhs10525.657-19C22.15
whole body, neonate N01.CNhs10576.659-23C60.38
whole body, neonate N06.CNhs10515.692-21D10.66
whole body, neonate N10.CNhs10518.761-6B40.70





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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
central nervous system7.44e-4673
nervous system4.33e-4575
ectoderm-derived structure7.53e-3895
ectoderm7.53e-3895
presumptive ectoderm7.53e-3895
regional part of nervous system8.67e-3354
neurectoderm7.34e-3264
neural plate7.34e-3264
presumptive neural plate7.34e-3264
neural tube4.34e-3152
neural rod4.34e-3152
future spinal cord4.34e-3152
neural keel4.34e-3152
ecto-epithelium3.64e-2873
brain4.41e-2747
future brain4.41e-2747
regional part of brain3.48e-2646
anterior neural tube1.65e-2540
regional part of forebrain6.92e-2539
forebrain6.92e-2539
future forebrain6.92e-2539
gray matter4.25e-2434
pre-chordal neural plate7.62e-2349
brain grey matter9.58e-2029
regional part of telencephalon9.58e-2029
telencephalon9.58e-2029
structure with developmental contribution from neural crest7.19e-1692
cerebral cortex1.57e-1321
cerebral hemisphere1.57e-1321
pallium1.57e-1321
regional part of cerebral cortex3.69e-1017
autonomic nervous system6.20e-109
peripheral nervous system1.34e-0811
occipital lobe3.18e-0810
visual cortex3.18e-0810
neocortex3.18e-0810
basal ganglion1.86e-078
nuclear complex of neuraxis1.86e-078
aggregate regional part of brain1.86e-078
collection of basal ganglia1.86e-078
cerebral subcortex1.86e-078
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