FFCP PHASE1:Mm9::chr10:79179333..79179411,+: Difference between revisions
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{{FFCP|EntrezGene=15166|HGNC=|MCL_coexpression_id=20|UniProt=O88703|association_with_transcript=0bp_to_ENSMUST00000020581,ENSMUST00000099513,NM_008226,uc007fzn.1_5end|description=CAGE_peak_1_at_Hcn2_5end|id=chr10:79179333..79179411,+|ontology_enrichment_celltype=CL:0000221!8.28e-15!44;CL:0000133!8.28e-15!44;CL:0002319!9.39e-15!43;CL:0000055!1.48e-14!50;CL:0000393!7.86e-14!39;CL:0000211!7.86e-14!39;CL:0000540!3.62e-13!33;CL:0000047!3.62e-13!33;CL:0000031!3.62e-13!33;CL:0000404!3.62e-13!33;CL:0000117!6.77e-12!23;CL:0000337!6.77e-12!23;CL:0002321!5.63e-11!70;CL:0000220!5.63e-11!70|ontology_enrichment_celltype_v019_2=CL:0000221,4.03e-16,44;CL:0000133,4.03e-16,44;CL:0002319,4.63e-16,43;CL:0000393,4.78e-15,39;CL:0000211,4.78e-15,39;CL:0000540,2.56e-14,33;CL:0000047,2.56e-14,33;CL:0000031,2.56e-14,33;CL:0000404,2.56e-14,33;CL:0000117,6.42e-13,23;CL:0000337,6.42e-13,23;CL:0002321,4.63e-12,70|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!3.42e-30!73;UBERON:0005743!3.42e-30!73;UBERON:0000073!5.48e-30!75;UBERON:0001016!5.48e-30!75;UBERON:0004121!2.50e-23!102;UBERON:0000924!2.50e-23!102;UBERON:0006601!2.50e-23!102;UBERON:0001049!5.73e-23!52;UBERON:0005068!5.73e-23!52;UBERON:0006241!5.73e-23!52;UBERON:0007135!5.73e-23!52;UBERON:0002346!1.93e-22!71;UBERON:0003075!1.93e-22!71;UBERON:0007284!1.93e-22!71;UBERON:0000955!6.93e-22!50;UBERON:0006238!6.93e-22!50;UBERON:0002616!3.03e-21!49;UBERON:0000033!3.14e-19!63;UBERON:0002020!3.43e-17!34;UBERON:0003080!1.31e-15!40;UBERON:0002780!5.79e-15!39;UBERON:0001890!5.79e-15!39;UBERON:0006240!5.79e-15!39;UBERON:0003056!3.39e-14!49;UBERON:0002791!3.51e-14!29;UBERON:0003528!3.51e-14!29;UBERON:0001893!3.51e-14!29;UBERON:0000956!7.85e-10!21;UBERON:0001869!7.85e-10!21;UBERON:0000203!7.85e-10!21;UBERON:0002619!6.57e-09!17;UBERON:0003076!3.50e-08!12;UBERON:0003057!3.50e-08!12;UBERON:0007811!4.54e-07!86;UBERON:0002021!8.75e-07!10;UBERON:0000411!8.75e-07!10;UBERON:0001950!8.75e-07!10|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.88e-32,73;UBERON:0001016,3.10e-32,75;UBERON:0000073,3.73e-26,54;UBERON:0001049,1.65e-24,52;UBERON:0005068,1.65e-24,52;UBERON:0006241,1.65e-24,52;UBERON:0007135,1.65e-24,52;UBERON:0004121,1.39e-23,95;UBERON:0000924,1.39e-23,95;UBERON:0006601,1.39e-23,95;UBERON:0002346,4.72e-23,64;UBERON:0003075,4.72e-23,64;UBERON:0007284,4.72e-23,64;UBERON:0010314,5.09e-21,92;UBERON:0000955,6.11e-21,47;UBERON:0006238,6.11e-21,47;UBERON:0002616,2.94e-20,46;UBERON:0002020,9.65e-19,34;UBERON:0010371,3.28e-18,73;UBERON:0003080,1.80e-16,40;UBERON:0002780,9.10e-16,39;UBERON:0001890,9.10e-16,39;UBERON:0006240,9.10e-16,39;UBERON:0003528,1.97e-15,29;UBERON:0002791,1.97e-15,29;UBERON:0001893,1.97e-15,29;UBERON:0003056,1.20e-14,49;UBERON:0000956,1.19e-10,21;UBERON:0001869,1.19e-10,21;UBERON:0000203,1.19e-10,21;UBERON:0002619,1.23e-09,17;UBERON:0003076,7.70e-09,12;UBERON:0003057,7.70e-09,12;UBERON:0002021,2.64e-07,10;UBERON:0000411,2.64e-07,10;UBERON:0001950,2.64e-07,10|phase1_expression=2.7225304007815,2.44282785347553,1.81999695755814,3.62957053568196,5.50985302940982,1.00727563147134,2.10251376535973,0.129123323441576,0,0,0.171217968225505,0,0.171200729931206,0,0.999329285446988,0.202475267389826,0,0.157731082679119,0.137114433605739,0,15.6479653877968,1.09220046320974,1.30599894569468,1.75991665072747,1.37645568640302,1.72269589234506,2.58457197695445,2.15471232685889,2.85035129184561,2.52030129759931,0.221730510655305,0,1.23012957516914,0,0.866554859253824,1.32987716286794,0.408338712524738,0,0,0,0,0,0,4.65818226509636,5.37297735463427,2.38610777810186,10.9534788208725,3.70642765846759,4.83309602015838,2.52758868796568,1.39986421625363,1.43752564364972,0,0,0.336093799142464,3.34437266846731,1.14613375975503,1.54701627683233,11.3297218081375,13.2247744818008,14.5781222806421,3.04960078862219,3.55717918444456,0.899899717281399,0.988866362566974,2.1314403448383,8.68840320503374,10.7581125490035,2.17748185847803,2.43010688997043,3.57552434297349,79.6966246486612,40.4189429941453,3.79721477566358,2.87536413054709,6.43453150627015,233.445667718704,218.983784816097,184.788659507261,9.89147157976454,11.161492519494,8.33461392890816,244.005941127207,86.102679334847,123.460984203663,55.9794312399969,43.2809909629273,26.0959224155421,1.06016670666458,2.26714680320357,0.289864488701678,0,0,1.61910957491345,0.649776417447669,0.448026887097336,2.52799956237153,1.1930122580464,1.03914401841148,2.12003744706204,2.11265129665021,0,0,0,1.73192832808971,1.26679932737549,2.52762222507392,1.82694207550496,0,1.33597925158342,1.73485326766136,1.82679286987285,2.30615497256059,1.65794904607885,3.88042733547826,2.51333182659351,0.494389935468748,0.433798070759735,0.884610551949874,0.323533699894818,0.441683036920787,0,1.86391761218122,51.2366394770208,71.4213270233882,2.04365644166873,0,0,0.127070227073065,100.809100319446,50.7825669128675,19.7277332817197,50.930525816337,39.1244649715406,120.724853889104,104.321132152568,0.101839363850316,0.497627882440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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=15166 | |||
|HGNC= | |||
|MCL_coexpression_id=20 | |||
|TSSclassifier=NA | |||
|UniProt=O88703 | |||
|association_with_transcript=0bp_to_ENSMUST00000020581,ENSMUST00000099513,NM_008226,uc007fzn.1_5end | |||
|cluster_id=chr10:79179333..79179411,+ | |||
|description=CAGE_peak_1_at_Hcn2_5end | |||
|id=chr10:79179333..79179411,+ | |||
|ontology_enrichment_celltype=CL:0000221!8.28e-15!44;CL:0000133!8.28e-15!44;CL:0002319!9.39e-15!43;CL:0000055!1.48e-14!50;CL:0000393!7.86e-14!39;CL:0000211!7.86e-14!39;CL:0000540!3.62e-13!33;CL:0000047!3.62e-13!33;CL:0000031!3.62e-13!33;CL:0000404!3.62e-13!33;CL:0000117!6.77e-12!23;CL:0000337!6.77e-12!23;CL:0002321!5.63e-11!70;CL:0000220!5.63e-11!70 | |||
|ontology_enrichment_celltype_v019_2=CL:0000221,4.03e-16,44;CL:0000133,4.03e-16,44;CL:0002319,4.63e-16,43;CL:0000393,4.78e-15,39;CL:0000211,4.78e-15,39;CL:0000540,2.56e-14,33;CL:0000047,2.56e-14,33;CL:0000031,2.56e-14,33;CL:0000404,2.56e-14,33;CL:0000117,6.42e-13,23;CL:0000337,6.42e-13,23;CL:0002321,4.63e-12,70 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!3.42e-30!73;UBERON:0005743!3.42e-30!73;UBERON:0000073!5.48e-30!75;UBERON:0001016!5.48e-30!75;UBERON:0004121!2.50e-23!102;UBERON:0000924!2.50e-23!102;UBERON:0006601!2.50e-23!102;UBERON:0001049!5.73e-23!52;UBERON:0005068!5.73e-23!52;UBERON:0006241!5.73e-23!52;UBERON:0007135!5.73e-23!52;UBERON:0002346!1.93e-22!71;UBERON:0003075!1.93e-22!71;UBERON:0007284!1.93e-22!71;UBERON:0000955!6.93e-22!50;UBERON:0006238!6.93e-22!50;UBERON:0002616!3.03e-21!49;UBERON:0000033!3.14e-19!63;UBERON:0002020!3.43e-17!34;UBERON:0003080!1.31e-15!40;UBERON:0002780!5.79e-15!39;UBERON:0001890!5.79e-15!39;UBERON:0006240!5.79e-15!39;UBERON:0003056!3.39e-14!49;UBERON:0002791!3.51e-14!29;UBERON:0003528!3.51e-14!29;UBERON:0001893!3.51e-14!29;UBERON:0000956!7.85e-10!21;UBERON:0001869!7.85e-10!21;UBERON:0000203!7.85e-10!21;UBERON:0002619!6.57e-09!17;UBERON:0003076!3.50e-08!12;UBERON:0003057!3.50e-08!12;UBERON:0007811!4.54e-07!86;UBERON:0002021!8.75e-07!10;UBERON:0000411!8.75e-07!10;UBERON:0001950!8.75e-07!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.88e-32,73;UBERON:0001016,3.10e-32,75;UBERON:0000073,3.73e-26,54;UBERON:0001049,1.65e-24,52;UBERON:0005068,1.65e-24,52;UBERON:0006241,1.65e-24,52;UBERON:0007135,1.65e-24,52;UBERON:0004121,1.39e-23,95;UBERON:0000924,1.39e-23,95;UBERON:0006601,1.39e-23,95;UBERON:0002346,4.72e-23,64;UBERON:0003075,4.72e-23,64;UBERON:0007284,4.72e-23,64;UBERON:0010314,5.09e-21,92;UBERON:0000955,6.11e-21,47;UBERON:0006238,6.11e-21,47;UBERON:0002616,2.94e-20,46;UBERON:0002020,9.65e-19,34;UBERON:0010371,3.28e-18,73;UBERON:0003080,1.80e-16,40;UBERON:0002780,9.10e-16,39;UBERON:0001890,9.10e-16,39;UBERON:0006240,9.10e-16,39;UBERON:0003528,1.97e-15,29;UBERON:0002791,1.97e-15,29;UBERON:0001893,1.97e-15,29;UBERON:0003056,1.20e-14,49;UBERON:0000956,1.19e-10,21;UBERON:0001869,1.19e-10,21;UBERON:0000203,1.19e-10,21;UBERON:0002619,1.23e-09,17;UBERON:0003076,7.70e-09,12;UBERON:0003057,7.70e-09,12;UBERON:0002021,2.64e-07,10;UBERON:0000411,2.64e-07,10;UBERON:0001950,2.64e-07,10 | |||
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| |||
|short_description=p1@Hcn2 | |||
}} |
Latest revision as of 08:54, 26 September 2015
Short description: | p1@Hcn2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Hcn2_5end |
Coexpression cluster: | MCL_coexpression_mm9:20 |
Association with transcript: | 0bp_to_ENSMUST00000020581, ENSMUST00000099513, NM_008226, uc007fzn.1_5end |
EntrezGene: | Hcn2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ectodermal cell | 4.03e-16 | 44 |
neurectodermal cell | 4.03e-16 | 44 |
neural cell | 4.63e-16 | 43 |
electrically responsive cell | 4.78e-15 | 39 |
electrically active cell | 4.78e-15 | 39 |
neuron | 2.56e-14 | 33 |
neuronal stem cell | 2.56e-14 | 33 |
neuroblast | 2.56e-14 | 33 |
electrically signaling cell | 2.56e-14 | 33 |
CNS neuron (sensu Vertebrata) | 6.42e-13 | 23 |
neuroblast (sensu Vertebrata) | 6.42e-13 | 23 |
embryonic cell | 4.63e-12 | 70 |