FFCP PHASE1:Mm9::chr1:134288344..134288382,-: Difference between revisions
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{{FFCP|EntrezGene=68875|HGNC=|MCL_coexpression_id=13|UniProt=Q80W04|association_with_transcript=-486bp_to_ENSMUST00000045473,NM_178874,uc007cot.1_5end|description=CAGE_peak_4_at_Tmcc2_5end|id=chr1:134288344..134288382,-|ontology_enrichment_celltype=CL:0000221!5.78e-18!44;CL:0000133!5.78e-18!44;CL:0002319!6.55e-18!43;CL:0000540!8.97e-18!33;CL:0000047!8.97e-18!33;CL:0000031!8.97e-18!33;CL:0000404!8.97e-18!33;CL:0000055!6.06e-15!50;CL:0000117!6.44e-15!23;CL:0000337!6.44e-15!23;CL:0000393!7.90e-14!39;CL:0000211!7.90e-14!39|ontology_enrichment_celltype_v019_2=CL:0000221,2.65e-18,44;CL:0000133,2.65e-18,44;CL:0002319,3.01e-18,43;CL:0000540,4.14e-18,33;CL:0000047,4.14e-18,33;CL:0000031,4.14e-18,33;CL:0000404,4.14e-18,33;CL:0000117,3.41e-15,23;CL:0000337,3.41e-15,23;CL:0000393,1.03e-13,39;CL:0000211,1.03e-13,39|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!1.04e-34!73;UBERON:0005743!1.04e-34!73;UBERON:0000073!2.15e-34!75;UBERON:0001016!2.15e-34!75;UBERON:0004121!1.36e-27!102;UBERON:0000924!1.36e-27!102;UBERON:0006601!1.36e-27!102;UBERON:0001049!2.22e-25!52;UBERON:0005068!2.22e-25!52;UBERON:0006241!2.22e-25!52;UBERON:0007135!2.22e-25!52;UBERON:0000033!2.02e-24!63;UBERON:0000955!2.74e-24!50;UBERON:0006238!2.74e-24!50;UBERON:0002616!1.05e-23!49;UBERON:0002346!2.75e-23!71;UBERON:0003075!2.75e-23!71;UBERON:0007284!2.75e-23!71;UBERON:0003056!1.03e-18!49;UBERON:0003080!2.48e-18!40;UBERON:0002020!2.89e-18!34;UBERON:0002780!1.19e-17!39;UBERON:0001890!1.19e-17!39;UBERON:0006240!1.19e-17!39;UBERON:0002791!3.38e-15!29;UBERON:0003528!3.38e-15!29;UBERON:0001893!3.38e-15!29;UBERON:0000025!1.50e-11!114;UBERON:0004111!2.11e-11!122;UBERON:0000956!2.20e-10!21;UBERON:0001869!2.20e-10!21;UBERON:0000203!2.20e-10!21;UBERON:0000153!2.37e-09!94;UBERON:0007811!2.70e-09!86;UBERON:0002619!2.26e-08!17;UBERON:0003076!1.27e-07!12;UBERON:0003057!1.27e-07!12|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.12e-35,73;UBERON:0001016,4.47e-35,75;UBERON:0004121,4.70e-31,95;UBERON:0000924,4.70e-31,95;UBERON:0006601,4.70e-31,95;UBERON:0002346,1.24e-27,64;UBERON:0003075,1.24e-27,64;UBERON:0007284,1.24e-27,64;UBERON:0000073,1.45e-27,54;UBERON:0001049,7.14e-26,52;UBERON:0005068,7.14e-26,52;UBERON:0006241,7.14e-26,52;UBERON:0007135,7.14e-26,52;UBERON:0010314,5.58e-25,92;UBERON:0010371,1.63e-24,73;UBERON:0000955,1.94e-22,47;UBERON:0006238,1.94e-22,47;UBERON:0002616,7.44e-22,46;UBERON:0003056,4.57e-19,49;UBERON:0003080,1.12e-18,40;UBERON:0002020,1.30e-18,34;UBERON:0002780,5.53e-18,39;UBERON:0001890,5.53e-18,39;UBERON:0006240,5.53e-18,39;UBERON:0003528,1.77e-15,29;UBERON:0002791,1.77e-15,29;UBERON:0001893,1.77e-15,29;UBERON:0000025,2.34e-11,114;UBERON:0004111,2.71e-11,122;UBERON:0000956,1.45e-10,21;UBERON:0001869,1.45e-10,21;UBERON:0000203,1.45e-10,21;UBERON:0002619,1.63e-08,17;UBERON:0003076,9.48e-08,12;UBERON:0003057,9.48e-08,12|phase1_expression=5.44506080156299,0,0,0,0,0,0,0,0,0,0,0,0,0,0.666219523631325,1.21485160433896,1.39912375625629,0,0.274228867211478,0,2.8064285749853,0,0,0,0,0,0,0,0,0,0,3.17515336729816,4.30545351309199,0,0,0,0,0,0,0,0,0,0,2.39203954153597,0.912392380975631,1.10128051297009,7.04152209913235,4.14247797122848,2.85592037554813,3.69416808241138,2.37976916763116,2.87505128729943,0,0,0,2.05807548828758,1.43266719969378,0.515672092277442,12.1389876515759,14.2827564403449,16.4796164911607,3.72728985276045,4.4464739805557,4.04954872776629,4.94433181283487,8.5257613793532,5.39280198933128,4.61061966385865,9.95420278161385,9.18040380655497,9.25429829946081,14.568200204594,16.565140571371,9.55428233876641,10.4471563409878,10.1114066527102,24.2254938198655,21.1960981221412,23.1945865216928,12.924856197559,16.5592634920361,14.5855743755893,24.5681039121215,14.6318278608237,18.1829914854404,11.490514833473,11.8168495063255,11.183966749518,2.12033341332915,3.6274348851257,4.63783181922684,5.16254326188832,0,0,0,0,3.37066608316204,2.55645483867087,3.89679006904303,4.24007489412408,3.66192891419369,3.84979432242953,0,0,0.432982082022428,1.01343946190039,0.505524445014783,1.1418387971906,0.517875767294343,2.22663208597237,2.08182392119363,1.52232739156071,0.461230994512117,1.20578112442098,1.17588707135705,1.88499886994513,0.494389935468748,1.44599356919912,0.884610551949874,4.85300549842228,1.98757366614354,2.90925151881133,0,12.296793474485,10.6817820474862,0.510914110417183,2.15667224110656,1.19980546198682,1.77898317902291,16.4769703345305,8.6925114535539,8.16753288733619,15.4703644971126,15.5986428971502,12.259494629014,11.6813709408785,2.34230536855727,1.7416975885413,0.758168275301024,3.15662783829711,2.47228841629137,3.44853156650209,5.40186389416048,2.71268672104287,4.08218994907967,3.45907044769094,3.65436725782942,4.65666067330228,4.31135985865684,3.59301552318857,3.87092473160687,4.82230611340665,2.22437799380478,2.089512999133,1.64625709126355,2.7864797354589,2.1066395619397,1.28673953557358,0.284163499395593,3.10688658803253,3.04883877975425,4.32148947506436,4.26140524053378,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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=68875 | |||
|HGNC= | |||
|MCL_coexpression_id=13 | |||
|TSSclassifier=NA | |||
|UniProt=Q80W04 | |||
|association_with_transcript=-486bp_to_ENSMUST00000045473,NM_178874,uc007cot.1_5end | |||
|cluster_id=chr1:134288344..134288382,- | |||
|description=CAGE_peak_4_at_Tmcc2_5end | |||
|id=chr1:134288344..134288382,- | |||
|ontology_enrichment_celltype=CL:0000221!5.78e-18!44;CL:0000133!5.78e-18!44;CL:0002319!6.55e-18!43;CL:0000540!8.97e-18!33;CL:0000047!8.97e-18!33;CL:0000031!8.97e-18!33;CL:0000404!8.97e-18!33;CL:0000055!6.06e-15!50;CL:0000117!6.44e-15!23;CL:0000337!6.44e-15!23;CL:0000393!7.90e-14!39;CL:0000211!7.90e-14!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000221,2.65e-18,44;CL:0000133,2.65e-18,44;CL:0002319,3.01e-18,43;CL:0000540,4.14e-18,33;CL:0000047,4.14e-18,33;CL:0000031,4.14e-18,33;CL:0000404,4.14e-18,33;CL:0000117,3.41e-15,23;CL:0000337,3.41e-15,23;CL:0000393,1.03e-13,39;CL:0000211,1.03e-13,39 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.04e-34!73;UBERON:0005743!1.04e-34!73;UBERON:0000073!2.15e-34!75;UBERON:0001016!2.15e-34!75;UBERON:0004121!1.36e-27!102;UBERON:0000924!1.36e-27!102;UBERON:0006601!1.36e-27!102;UBERON:0001049!2.22e-25!52;UBERON:0005068!2.22e-25!52;UBERON:0006241!2.22e-25!52;UBERON:0007135!2.22e-25!52;UBERON:0000033!2.02e-24!63;UBERON:0000955!2.74e-24!50;UBERON:0006238!2.74e-24!50;UBERON:0002616!1.05e-23!49;UBERON:0002346!2.75e-23!71;UBERON:0003075!2.75e-23!71;UBERON:0007284!2.75e-23!71;UBERON:0003056!1.03e-18!49;UBERON:0003080!2.48e-18!40;UBERON:0002020!2.89e-18!34;UBERON:0002780!1.19e-17!39;UBERON:0001890!1.19e-17!39;UBERON:0006240!1.19e-17!39;UBERON:0002791!3.38e-15!29;UBERON:0003528!3.38e-15!29;UBERON:0001893!3.38e-15!29;UBERON:0000025!1.50e-11!114;UBERON:0004111!2.11e-11!122;UBERON:0000956!2.20e-10!21;UBERON:0001869!2.20e-10!21;UBERON:0000203!2.20e-10!21;UBERON:0000153!2.37e-09!94;UBERON:0007811!2.70e-09!86;UBERON:0002619!2.26e-08!17;UBERON:0003076!1.27e-07!12;UBERON:0003057!1.27e-07!12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.12e-35,73;UBERON:0001016,4.47e-35,75;UBERON:0004121,4.70e-31,95;UBERON:0000924,4.70e-31,95;UBERON:0006601,4.70e-31,95;UBERON:0002346,1.24e-27,64;UBERON:0003075,1.24e-27,64;UBERON:0007284,1.24e-27,64;UBERON:0000073,1.45e-27,54;UBERON:0001049,7.14e-26,52;UBERON:0005068,7.14e-26,52;UBERON:0006241,7.14e-26,52;UBERON:0007135,7.14e-26,52;UBERON:0010314,5.58e-25,92;UBERON:0010371,1.63e-24,73;UBERON:0000955,1.94e-22,47;UBERON:0006238,1.94e-22,47;UBERON:0002616,7.44e-22,46;UBERON:0003056,4.57e-19,49;UBERON:0003080,1.12e-18,40;UBERON:0002020,1.30e-18,34;UBERON:0002780,5.53e-18,39;UBERON:0001890,5.53e-18,39;UBERON:0006240,5.53e-18,39;UBERON:0003528,1.77e-15,29;UBERON:0002791,1.77e-15,29;UBERON:0001893,1.77e-15,29;UBERON:0000025,2.34e-11,114;UBERON:0004111,2.71e-11,122;UBERON:0000956,1.45e-10,21;UBERON:0001869,1.45e-10,21;UBERON:0000203,1.45e-10,21;UBERON:0002619,1.63e-08,17;UBERON:0003076,9.48e-08,12;UBERON:0003057,9.48e-08,12 | |||
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| |||
|short_description=p4@Tmcc2 | |||
}} |
Latest revision as of 09:07, 26 September 2015
Short description: | p4@Tmcc2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Tmcc2_5end |
Coexpression cluster: | MCL_coexpression_mm9:13 |
Association with transcript: | -486bp_to_ENSMUST00000045473, NM_178874, uc007cot.1_5end |
EntrezGene: | Tmcc2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ectodermal cell | 2.65e-18 | 44 |
neurectodermal cell | 2.65e-18 | 44 |
neural cell | 3.01e-18 | 43 |
neuron | 4.14e-18 | 33 |
neuronal stem cell | 4.14e-18 | 33 |
neuroblast | 4.14e-18 | 33 |
electrically signaling cell | 4.14e-18 | 33 |
CNS neuron (sensu Vertebrata) | 3.41e-15 | 23 |
neuroblast (sensu Vertebrata) | 3.41e-15 | 23 |
electrically responsive cell | 1.03e-13 | 39 |
electrically active cell | 1.03e-13 | 39 |