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FFCP PHASE1:Mm9::chr4:128798478..128798559,-: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=15444
|EntrezGene=15444
|HGNC=
|HGNC=
|MCL_coexpression_id=235
|TSSclassifier=NA
|UniProt=P84075
|UniProt=P84075
|association_with_transcript=0bp_to_ENSMUST00000030572,NM_010471,uc008uwd.2_5end
|association_with_transcript=0bp_to_ENSMUST00000030572,NM_010471,uc008uwd.2_5end
|cluster_id=chr4:128798478..128798559,-
|description=CAGE_peak_1_at_Hpca_5end
|description=CAGE_peak_1_at_Hpca_5end
|id=chr4:128798478..128798559,-
|id=chr4:128798478..128798559,-
|ontology_enrichment_celltype=CL:0000117!2.15e-13!23;CL:0000337!2.15e-13!23;CL:0000540!2.24e-13!33;CL:0000047!2.24e-13!33;CL:0000031!2.24e-13!33;CL:0000404!2.24e-13!33;CL:0000221!3.22e-10!44;CL:0000133!3.22e-10!44;CL:0002319!3.79e-10!43;CL:0000393!4.05e-09!39;CL:0000211!4.05e-09!39
|ontology_enrichment_celltype_v019_2=CL:0000117,1.18e-15,23;CL:0000337,1.18e-15,23;CL:0000540,5.15e-15,33;CL:0000047,5.15e-15,33;CL:0000031,5.15e-15,33;CL:0000404,5.15e-15,33;CL:0000393,9.54e-11,39;CL:0000211,9.54e-11,39;CL:0000221,5.42e-10,44;CL:0000133,5.42e-10,44;CL:0002319,6.74e-10,43
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002346!9.64e-28!71;UBERON:0003075!9.64e-28!71;UBERON:0007284!9.64e-28!71;UBERON:0001017!7.47e-27!73;UBERON:0005743!7.47e-27!73;UBERON:0000073!1.95e-26!75;UBERON:0001016!1.95e-26!75;UBERON:0004121!4.16e-25!102;UBERON:0000924!4.16e-25!102;UBERON:0006601!4.16e-25!102;UBERON:0000033!6.74e-24!63;UBERON:0001049!1.53e-23!52;UBERON:0005068!1.53e-23!52;UBERON:0006241!1.53e-23!52;UBERON:0007135!1.53e-23!52;UBERON:0000955!2.27e-22!50;UBERON:0006238!2.27e-22!50;UBERON:0002616!9.46e-22!49;UBERON:0003056!4.19e-20!49;UBERON:0002020!2.05e-18!34;UBERON:0003080!1.06e-17!40;UBERON:0002780!4.89e-17!39;UBERON:0001890!4.89e-17!39;UBERON:0006240!4.89e-17!39;UBERON:0002791!2.20e-15!29;UBERON:0003528!2.20e-15!29;UBERON:0001893!2.20e-15!29;UBERON:0000956!7.41e-11!21;UBERON:0001869!7.41e-11!21;UBERON:0000203!7.41e-11!21;UBERON:0007811!9.10e-11!86;UBERON:0000153!2.46e-09!94;UBERON:0002619!9.19e-09!17;UBERON:0002021!3.02e-08!10;UBERON:0000411!3.02e-08!10;UBERON:0001950!3.02e-08!10
|ontology_enrichment_uberon_v019_2=UBERON:0002346,1.48e-29,64;UBERON:0003075,1.48e-29,64;UBERON:0007284,1.48e-29,64;UBERON:0001017,1.75e-29,73;UBERON:0000073,3.86e-28,54;UBERON:0001016,6.21e-28,75;UBERON:0001049,1.91e-26,52;UBERON:0005068,1.91e-26,52;UBERON:0006241,1.91e-26,52;UBERON:0007135,1.91e-26,52;UBERON:0004121,1.83e-25,95;UBERON:0000924,1.83e-25,95;UBERON:0006601,1.83e-25,95;UBERON:0010371,2.26e-24,73;UBERON:0000955,1.05e-22,47;UBERON:0006238,1.05e-22,47;UBERON:0003056,1.57e-22,49;UBERON:0002616,5.48e-22,46;UBERON:0002020,1.33e-21,34;UBERON:0003080,4.96e-20,40;UBERON:0002780,3.02e-19,39;UBERON:0001890,3.02e-19,39;UBERON:0006240,3.02e-19,39;UBERON:0010314,4.29e-19,92;UBERON:0003528,5.46e-18,29;UBERON:0002791,5.46e-18,29;UBERON:0001893,5.46e-18,29;UBERON:0000956,1.35e-12,21;UBERON:0001869,1.35e-12,21;UBERON:0000203,1.35e-12,21;UBERON:0002619,4.19e-10,17;UBERON:0002021,1.58e-09,10;UBERON:0000411,1.58e-09,10;UBERON:0001950,1.58e-09,10;UBERON:0003076,6.24e-07,12;UBERON:0003057,6.24e-07,12
|phase1_expression=3.04282809499109,0,0,0,0,0.16787927191189,0.233612640595526,0,0,0.234064526321993,0,0,0,0,0,0,0,0,0,0,72.3718399185604,0,0,0,0,0,0,0,0.190023419456374,0,0,0,0,0,0.288851619751275,0,0,0,0,0,0,0,0,0,0,0,3.12956537739216,0.436050312760893,0.219686182734472,0,0.139986421625363,1.43752564364972,0,0,0,0,0,0.515672092277442,33.3822160418336,43.3772603003067,33.5930643858275,0.338844532069132,0.889294796111139,0,0.988866362566974,0.7104801149461,0,0.384218305321555,23.7449212186414,24.8410926530311,23.3460707100034,137.112472513826,159.246218026113,18.4961106814581,12.9391385874619,20.2228133054205,135.442533629248,182.975955476074,202.607017364985,26.9048026969595,21.3166209593614,17.7110545989298,104.693624625518,181.209560430201,192.06739745545,97.522061791784,118.168495063255,57.038230422542,0.454357159999104,0.755715601067855,0,0,0,0,0,0,16.7128859956785,0,0,0,1.69012103732017,0,0,0,0,0,0,10.1623652949963,0,6.08612770165782,4.68410382268567,4.26251669636998,2.7673859670727,3.46662073271032,4.8211369925639,1.13099932196708,1.73036477414062,0.289198713839823,0,0.485300549842228,0,0,0,43.6243387547205,35.3964934514739,0,0,0,0,226.483446780092,1104.86395580698,68.2303131972854,430.562841116269,451.337782188033,169.347256316041,343.951477703646,2.85150218780886,0.248813941220186,0,10.1012090825508,0.260240885925407,1.60931473103431,3.06105620669094,9.19299388797862,13.1990808353576,13.1957131893395,14.2426621330788,21.4723797713383,0,0.756424320671277,0.527853372491847,1.31517439456545,0.278047249225598,0.696504333044333,0,2.18937693500343,0,0,0,0,0.234526059981096,0,0,0.393528463494808,0.462801338662135,0.232533944750408,0,0.116765342367169,0.658239399653922,0,0,0.146199987425332,0.219550115291051,0,1345.22480096472,48.2622632058844,0,1.32225283331772,0.213288250535234,1.39342003116263,2.19074684247559,1.4117846723634,1.33426826306922,1.90225626112559,0.949058123089023,2.47048432086016,1.00534083520108,1.59165177632921,0.974820435595601,0,0.648414149624083,0.398282546508734,0.948339504765408,1.37098215131675,0,0.814605311381257,0.581857461502877,0.210407459670956,0.316182685621286,0,0,0,0,1.66845105716094,0.589676985339609,0.674586337154561,0,0.72353147925725,0.50925170356284,0.575392274901621,0,0,0,0,0.312037673114561,0.252578877947112,0,0,0.184753190166605,0.568474235311454,0.651859905768103,0.169745085775188,0.704070744865506,1.17254380209271,0.714130922658041,0,0,0.221464689648775,0.159454768657487,0.163863314715738,0.172684981865896,0.144649058581512,0,0,0,0,93.2798927829071,78.6490417033683,0,0,1.26203287766503,2.73307121007647,4.52389135238878,0.716906393857656,2.00518806674155,1.69845918473299,3.23848561339915,1.46127928955656,4.34816555741176,85.7927914846225,0.141940085208269,4.62970569534864,2.60619134965722,0.989820737835213,0,2.42780636154981,3.62788268357701,2.07465587731488,3.2483208216885,1.22974059177571,1.29214146584111,1.81766864738753,1.06949213515416,0.632073515871632,0,0,1.36175842301515,0.900305470156551,1.81102157295856,1.71469628025274,2.6601035046341,4.8159580752559,4.77192159746151,7.00269382963578,0.23467170806371,8.47328283455281,2.8668691747145,0,0,0.0603129249281559,0,0,0.291480836629851,82.5142593946768,0,0,0.185194527369712,0,0,0,0,0,0,0,1.10717597753397,1.21991680276109,0.648032044930808,0.418176592028937,0,0.539457385539283,0.41326727862668,0,0.518459893167171,0.621339313086926,0,0.897099276263873,0.827292452285488,0.972255941720238,1.54991788173277,1.520605129417,1.05621514781179,0.39061315453185,0.419437377702843,0,0,0.316011120628178,0.202725215290164,0.821687657318618,0,0,0,0,0,0.100966449948148,0,0.100826185136841,0,0,0,0,0,0,0,2.12508553435409,0,0.36630324853453,0.214368379079066,0,304.965995013216,290.925549472536,304.20751763632,241.797427557568,432.972152495046,424.531370333012,434.714490149283,419.249040201749,374.748772229937,457.182355276857,2.17953429926771,1.19707462020309,4.43907374960749,6.32077464377565,9.22297915563122,10.1113929647508,7.77863547305653,10.3017528619447,6.09746498224449,8.33900798820532,7.85785829659743,6.03604292435444,6.55490552289177,6.14641463086745,8.15583659169708,7.1444053692461,8.22778714208474,5.59436739344745,9.47797571847605,6.18235464564469,7.20025430009372,5.50174999093946,7.62995807831427,6.54058874845478,6.39943786824248,6.76916863133412,9.14639864363863,8.94437018888666,7.19761803383067,11.2228454331548,8.42308628681636,7.09232273104057,6.95692773388472,7.2820315357404,7.13754460630223,19.7350356570977,7.95367468714389,7.30561583764214,4.97349663378993,5.95596831622692,4.63735671240843
|phase1_expression=3.04282809499109,0,0,0,0,0.16787927191189,0.233612640595526,0,0,0.234064526321993,0,0,0,0,0,0,0,0,0,0,72.3718399185604,0,0,0,0,0,0,0,0.190023419456374,0,0,0,0,0,0.288851619751275,0,0,0,0,0,0,0,0,0,0,0,3.12956537739216,0.436050312760893,0.219686182734472,0,0.139986421625363,1.43752564364972,0,0,0,0,0,0.515672092277442,33.3822160418336,43.3772603003067,33.5930643858275,0.338844532069132,0.889294796111139,0,0.988866362566974,0.7104801149461,0,0.384218305321555,23.7449212186414,24.8410926530311,23.3460707100034,137.112472513826,159.246218026113,18.4961106814581,12.9391385874619,20.2228133054205,135.442533629248,182.975955476074,202.607017364985,26.9048026969595,21.3166209593614,17.7110545989298,104.693624625518,181.209560430201,192.06739745545,97.522061791784,118.168495063255,57.038230422542,0.454357159999104,0.755715601067855,0,0,0,0,0,0,16.7128859956785,0,0,0,1.69012103732017,0,0,0,0,0,0,10.1623652949963,0,6.08612770165782,4.68410382268567,4.26251669636998,2.7673859670727,3.46662073271032,4.8211369925639,1.13099932196708,1.73036477414062,0.289198713839823,0,0.485300549842228,0,0,0,43.6243387547205,35.3964934514739,0,0,0,0,226.483446780092,1104.86395580698,68.2303131972854,430.562841116269,451.337782188033,169.347256316041,343.951477703646,2.85150218780886,0.248813941220186,0,10.1012090825508,0.260240885925407,1.60931473103431,3.06105620669094,9.19299388797862,13.1990808353576,13.1957131893395,14.2426621330788,21.4723797713383,0,0.756424320671277,0.527853372491847,1.31517439456545,0.278047249225598,0.696504333044333,0,2.18937693500343,0,0,0,0,0.234526059981096,0,0,0.393528463494808,0.462801338662135,0.232533944750408,0,0.116765342367169,0.658239399653922,0,0,0.146199987425332,0.219550115291051,0,1345.22480096472,48.2622632058844,0,1.32225283331772,0.213288250535234,1.39342003116263,2.19074684247559,1.4117846723634,1.33426826306922,1.90225626112559,0.949058123089023,2.47048432086016,1.00534083520108,1.59165177632921,0.974820435595601,0,0.648414149624083,0.398282546508734,0.948339504765408,1.37098215131675,0,0.814605311381257,0.581857461502877,0.210407459670956,0.316182685621286,0,0,0,0,1.66845105716094,0.589676985339609,0.674586337154561,0,0.72353147925725,0.50925170356284,0.575392274901621,0,0,0,0,0.312037673114561,0.252578877947112,0,0,0.184753190166605,0.568474235311454,0.651859905768103,0.169745085775188,0.704070744865506,1.17254380209271,0.714130922658041,0,0,0.221464689648775,0.159454768657487,0.163863314715738,0.172684981865896,0.144649058581512,0,0,0,0,93.2798927829071,78.6490417033683,0,0,1.26203287766503,2.73307121007647,4.52389135238878,0.716906393857656,2.00518806674155,1.69845918473299,3.23848561339915,1.46127928955656,4.34816555741176,85.7927914846225,0.141940085208269,4.62970569534864,2.60619134965722,0.989820737835213,0,2.42780636154981,3.62788268357701,2.07465587731488,3.2483208216885,1.22974059177571,1.29214146584111,1.81766864738753,1.06949213515416,0.632073515871632,0,0,1.36175842301515,0.900305470156551,1.81102157295856,1.71469628025274,2.6601035046341,4.8159580752559,4.77192159746151,7.00269382963578,0.23467170806371,8.47328283455281,2.8668691747145,0,0,0.0603129249281559,0,0,0.291480836629851,82.5142593946768,0,0,0.185194527369712,0,0,0,0,0,0,0,1.10717597753397,1.21991680276109,0.648032044930808,0.418176592028937,0,0.539457385539283,0.41326727862668,0,0.518459893167171,0.621339313086926,0,0.897099276263873,0.827292452285488,0.972255941720238,1.54991788173277,1.520605129417,1.05621514781179,0.39061315453185,0.419437377702843,0,0,0.316011120628178,0.202725215290164,0.821687657318618,0,0,0,0,0,0.100966449948148,0,0.100826185136841,0,0,0,0,0,0,0,2.12508553435409,0,0.36630324853453,0.214368379079066,0,304.965995013216,290.925549472536,304.20751763632,241.797427557568,432.972152495046,424.531370333012,434.714490149283,419.249040201749,374.748772229937,457.182355276857,2.17953429926771,1.19707462020309,4.43907374960749,6.32077464377565,9.22297915563122,10.1113929647508,7.77863547305653,10.3017528619447,6.09746498224449,8.33900798820532,7.85785829659743,6.03604292435444,6.55490552289177,6.14641463086745,8.15583659169708,7.1444053692461,8.22778714208474,5.59436739344745,9.47797571847605,6.18235464564469,7.20025430009372,5.50174999093946,7.62995807831427,6.54058874845478,6.39943786824248,6.76916863133412,9.14639864363863,8.94437018888666,7.19761803383067,11.2228454331548,8.42308628681636,7.09232273104057,6.95692773388472,7.2820315357404,7.13754460630223,19.7350356570977,7.95367468714389,7.30561583764214,4.97349663378993,5.95596831622692,4.63735671240843
|short_description=p1@Hpca
|short_description=p1@Hpca
}}
}}

Latest revision as of 09:12, 26 September 2015

Short description:p1@Hpca
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Hpca_5end
Coexpression cluster:MCL_coexpression_mm9:235
Association with transcript: 0bp_to_ENSMUST00000030572, NM_010471, uc008uwd.2_5end
EntrezGene:Hpca
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Hpca

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G73.04
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.17
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.23
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.23
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A372.37
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.19
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.29
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B73.13
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.44
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.22
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.14
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.52
Mouse Granule cells, donor1.CNhs12131.11713-123C333.38
Mouse Granule cells, donor2.CNhs12357.11731-123E343.38
Mouse Granule cells, donor3.CNhs12108.11636-122C733.59
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.34
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.89
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.99
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.71
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.38
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D523.74
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F524.84
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D923.35
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F1137.11
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D5159.25
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D218.50
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F212.94
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D620.22
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D3135.44
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F3182.98
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D7202.61
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D426.90
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F421.32
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D817.71
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E4104.69
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E5181.21
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I6192.07
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D697.52
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F6118.17
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E157.04
Mouse Schwann, donor1.CNhs12507.11728-123D90.45
Mouse Schwann, donor2.CNhs12573.11746-123F90.76
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A716.71
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G61.69
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B610.16
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D76.09
adrenal gland, embryo E14.CNhs11038.406-44C54.68
adrenal gland, embryo E16.CNhs11004.1254-43D64.26
adrenal gland, embryo E17.CNhs11043.1263-45I12.77
adrenal gland, embryo E18.CNhs11026.1262-18F53.47
adrenal gland, neonate N00.CNhs11191.1311-23C14.82
adrenal gland, neonate N25.CNhs11223.1377-27I31.13
amnion, adult pregnant day17.5.CNhs10488.583-22A81.73
aorta, adult.CNhs10498.46-23H10.29
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.49
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B243.62
cerebellum, neonate N30.CNhs11135.1395-42I235.40
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A4226.48
corpus striatum, adult.CNhs10487.19-21D81104.86
corpus striatum, neonate N00.CNhs11226.630-43F168.23
cortex, adult.CNhs10473.12-14D5430.56
cortex, neonate N30.CNhs11107.1392-42F2451.34
diencephalon, adult.CNhs10482.20-12F2169.35
diencephalon, neonate N30.CNhs11201.1388-42B2343.95
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B12.85
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.25
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G410.10
eyeball, embryo E12.CNhs11016.345-16C60.26
eyeball, embryo E14.CNhs10521.399-16E21.61
eyeball, embryo E15.CNhs10593.426-16C93.06
eyeball, embryo E17.CNhs11023.1261-18D49.19
eyeball, neonate N00.CNhs11207.633-15C613.20
eyeball, neonate N01.CNhs11140.1532-43E713.20
eyeball, neonate N02.CNhs11205.1551-44G814.24
eyeball, neonate N16.CNhs11188.777-19A221.47
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.76
forelimb, embryo E13.CNhs10589.384-1E20.53
forelimb, embryo E14.CNhs10577.413-26A81.32
forelimb, embryo E15.CNhs11007.437-20E70.28
forelimb, embryo E17.CNhs10598.1517-43C40.70
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I62.19
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.23
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.39
heart, embryo E16.CNhs11021.457-17C60.46
heart, embryo E17.CNhs11025.479-18E50.23
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.12
heart, neonate N03.CNhs11221.1349-25I20.66
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.15
heart, neonate N25.CNhs11196.1351-25D30.22
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E81345.22
hippocampus, neonate N00.CNhs11228.627-43G148.26
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A31.32
intestine, embryo E12.CNhs11019.1251-16I50.21
intestine, embryo E13.CNhs11010.381-16D51.39
intestine, embryo E15.CNhs10602.976-16D82.19
intestine, embryo E16.CNhs10585.463-22H41.41
intestine, embryo E17.CNhs10582.482-18D31.33
intestine, embryo E18.CNhs10526.1289-20F71.90
intestine, neonate N00.CNhs11126.644-26D10.95
intestine, neonate N01.CNhs11192.1322-23E92.47
intestine, neonate N06.CNhs11102.688-20B81.01
intestine, neonate N07.CNhs11095.720-20F21.59
intestine, neonate N10.CNhs11098.755-23A50.97
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.65
intestine, neonate N30.CNhs11131.1384-42G10.40
kidney, embryo E14.CNhs10606.411-4I90.95
kidney, embryo E15.CNhs10997.434-16F81.37
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.81
kidney, embryo E18.CNhs11001.1288-20C70.58
kidney, neonate N00.CNhs11214.646-21G70.21
kidney, neonate N10.CNhs11206.758-6D50.32
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F81.67
liver, embryo E13.CNhs10524.378-3H60.59
liver, embryo E14.CNhs10594.409-16E10.67
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.72
liver, embryo E17.CNhs10510.481-18A30.51
liver, embryo E18.CNhs10579.499-43G40.58
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.31
liver, neonate N20.CNhs11220.823-25A30.25
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.18
lung, embryo E12.CNhs10522.354-16G20.57
lung, embryo E14.CNhs10604.404-26F80.65
lung, embryo E15.CNhs11020.432-17C50.17
lung, embryo E16.CNhs10998.458-17B60.70
lung, embryo E17.CNhs10605.480-44A61.17
lung, embryo E18.CNhs10583.1287-20I60.71
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.22
lung, neonate N10.CNhs11219.750-23E60.16
lung, neonate N20.CNhs11109.822-18A40.16
lung, neonate N25.CNhs11119.1359-25C70.17
lung, neonate N30.CNhs11133.1394-42H20.14
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C293.28
medulla oblongata, neonate N30.CNhs11200.1396-42A378.65
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E11.26
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E22.73
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E34.52
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.72
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D82.01
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D91.70
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D43.24
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D51.46
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D64.35
olfactory brain, adult.CNhs10489.18-22I985.79
ovary, adult.CNhs10507.91-2I70.14
ovary, embryo E18.CNhs11040.505-44H74.63
ovary, neonate N00.CNhs11217.1299-22I42.61
oviduct, adult pregnant day01.CNhs10500.988-6G60.99
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F42.43
pancreas, embryo E15.CNhs11042.1556-45F23.63
pancreas, embryo E16.CNhs11003.460-26E52.07
pancreas, embryo E17.CNhs10599.1558-45G33.25
pancreas, embryo E18.CNhs10580.1535-43I71.23
pancreas, neonate N00.CNhs11105.645-26G91.29
pancreas, neonate N01.CNhs11138.1531-43D71.82
pancreas, neonate N02.CNhs11139.1539-43D81.07
pancreas, neonate N16.CNhs11136.787-43B60.63
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G81.36
pituitary gland, embryo E12.CNhs11018.346-16E60.90
pituitary gland, embryo E13.CNhs11009.370-44C71.81
pituitary gland, embryo E14.CNhs11037.398-44A51.71
pituitary gland, embryo E15.CNhs10592.427-16B92.66
pituitary gland, embryo E16.CNhs11036.449-43F64.82
pituitary gland, embryo E17.CNhs11039.1265-44F54.77
pituitary gland, neonate N00.CNhs11190.1308-22E97.00
placenta, adult pregnant day10.CNhs10472.539-13I70.23
placenta, adult pregnant day17.CNhs10464.577-18G38.47
prostate, adult.CNhs10470.859-1F82.87
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.06
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.29
spinal cord, adult.CNhs10505.24-13C982.51
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.19
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E31.11
stomach, embryo E15.CNhs10603.1252-16G81.22
stomach, embryo E16.CNhs11022.459-17D40.65
stomach, embryo E17.CNhs11006.1035-18D50.42
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.54
stomach, neonate N07.CNhs11210.718-18A90.41
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.52
submandibular gland, adult.CNhs10469.59-29C10.62
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.90
testis, embryo E15.CNhs11034.443-27C50.83
testis, embryo E16.CNhs11033.470-26G50.97
testis, embryo E17.CNhs11029.486-18I51.55
testis, embryo E18.CNhs11027.503-18G51.52
testis, neonate N00.CNhs11189.1300-22B71.06
testis, neonate N07.CNhs11222.726-26I40.39
testis, neonate N10.CNhs11204.763-44D90.42
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.32
thymus, embryo E14.CNhs11041.402-44I40.20
thymus, embryo E15.CNhs11005.430-45I20.82
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.10
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.10
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E42.13
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.37
vagina, adult.CNhs10502.89-27D50.21
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A1304.97
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A2290.93
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A3304.21
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D7241.80
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A4432.97
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A5424.53
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A6434.71
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A7419.25
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A8374.75
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A9457.18
whole body, embryo E11.CNhs11014.324-5I82.18
whole body, embryo E12.CNhs10587.857-27C91.20
whole body, embryo E13.CNhs10512.372-23H24.44
whole body, embryo E14.5.CNhs10578.420-27D26.32
whole body, embryo E14.CNhs10519.395-14B19.22
whole body, embryo E16.CNhs10514.453-14F210.11
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G57.78
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G510.30
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G56.10
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G58.34
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G57.86
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G56.04
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G56.55
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G56.15
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G58.16
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G57.14
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G58.23
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G55.59
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G59.48
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G56.18
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G57.20
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G55.50
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G57.63
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G56.54
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G56.40
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G56.77
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G59.15
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G58.94
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G57.20
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G511.22
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G58.42
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G57.09
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G56.96
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G57.28
whole body, embryo E17.5.CNhs10513.490-9F97.14
whole body, embryo E17.CNhs10517.475-3I519.74
whole body, embryo E18.CNhs10516.493-3B37.95
whole body, neonate N00.CNhs10525.657-19C27.31
whole body, neonate N01.CNhs10576.659-23C64.97
whole body, neonate N06.CNhs10515.692-21D15.96
whole body, neonate N10.CNhs10518.761-6B44.64





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)1.18e-1523
neuroblast (sensu Vertebrata)1.18e-1523
neuron5.15e-1533
neuronal stem cell5.15e-1533
neuroblast5.15e-1533
electrically signaling cell5.15e-1533
electrically responsive cell9.54e-1139
electrically active cell9.54e-1139
ectodermal cell5.42e-1044
neurectodermal cell5.42e-1044
neural cell6.74e-1043

Uber anatomy
Ontology termp-valuen
neurectoderm1.48e-2964
neural plate1.48e-2964
presumptive neural plate1.48e-2964
central nervous system1.75e-2973
regional part of nervous system3.86e-2854
nervous system6.21e-2875
neural tube1.91e-2652
neural rod1.91e-2652
future spinal cord1.91e-2652
neural keel1.91e-2652
ectoderm-derived structure1.83e-2595
ectoderm1.83e-2595
presumptive ectoderm1.83e-2595
ecto-epithelium2.26e-2473
brain1.05e-2247
future brain1.05e-2247
pre-chordal neural plate1.57e-2249
regional part of brain5.48e-2246
gray matter1.33e-2134
anterior neural tube4.96e-2040
regional part of forebrain3.02e-1939
forebrain3.02e-1939
future forebrain3.02e-1939
structure with developmental contribution from neural crest4.29e-1992
brain grey matter5.46e-1829
regional part of telencephalon5.46e-1829
telencephalon5.46e-1829
cerebral cortex1.35e-1221
cerebral hemisphere1.35e-1221
pallium1.35e-1221
regional part of cerebral cortex4.19e-1017
occipital lobe1.58e-0910
visual cortex1.58e-0910
neocortex1.58e-0910
posterior neural tube6.24e-0712
chordal neural plate6.24e-0712
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