FFCP PHASE1:Mm9::chr12:114047125..114047213,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chr12:114047125..114047213,+ to FFCP PHASE1:Mm9::chr12:114047125..114047213,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=217887 | |EntrezGene=217887 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=0 | |||
|TSSclassifier=NA | |||
|UniProt=Q8BHN9 | |UniProt=Q8BHN9 | ||
|association_with_transcript=0bp_to_ENSMUST00000037014,NM_145450,uc007pfg.1,uc007pfh.1_5end | |||
|cluster_id=chr12:114047125..114047213,+ | |||
|description=CAGE_peak_1_at_BC022687_5end | |||
|id=chr12:114047125..114047213,+ | |||
|ontology_enrichment_celltype=CL:0000221!2.90e-13!44;CL:0000133!2.90e-13!44;CL:0000055!3.10e-13!50;CL:0002319!8.90e-13!43;CL:0000117!5.16e-09!23;CL:0000337!5.16e-09!23;CL:0000393!8.13e-09!39;CL:0000211!8.13e-09!39;CL:0000540!1.22e-07!33;CL:0000047!1.22e-07!33;CL:0000031!1.22e-07!33;CL:0000404!1.22e-07!33;CL:0002321!3.23e-07!70;CL:0000220!3.23e-07!70;CL:0000333!5.31e-07!10;CL:0000095!5.31e-07!10;CL:0000243!5.31e-07!10;CL:0000123!5.31e-07!10;CL:0000125!5.31e-07!10;CL:0000030!5.31e-07!10;CL:0000339!5.31e-07!10;CL:0002453!9.61e-07!8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000221,2.49e-13,44;CL:0000133,2.49e-13,44;CL:0002319,7.70e-13,43;CL:0000117,4.68e-09,23;CL:0000337,4.68e-09,23;CL:0000393,7.40e-09,39;CL:0000211,7.40e-09,39;CL:0000540,1.13e-07,33;CL:0000047,1.13e-07,33;CL:0000031,1.13e-07,33;CL:0000404,1.13e-07,33;CL:0002321,3.80e-07,70;CL:0000333,4.95e-07,10;CL:0000095,4.95e-07,10;CL:0000243,4.95e-07,10;CL:0000123,4.95e-07,10;CL:0000125,4.95e-07,10;CL:0000030,4.95e-07,10;CL:0000339,4.95e-07,10;CL:0002453,8.98e-07,8 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!1.58e-25!75;UBERON:0001016!1.58e-25!75;UBERON:0001017!6.75e-25!73;UBERON:0005743!6.75e-25!73;UBERON:0004121!6.52e-24!102;UBERON:0000924!6.52e-24!102;UBERON:0006601!6.52e-24!102;UBERON:0002346!1.13e-20!71;UBERON:0003075!1.13e-20!71;UBERON:0007284!1.13e-20!71;UBERON:0000033!5.39e-20!63;UBERON:0001049!6.97e-20!52;UBERON:0005068!6.97e-20!52;UBERON:0006241!6.97e-20!52;UBERON:0007135!6.97e-20!52;UBERON:0000955!6.41e-19!50;UBERON:0006238!6.41e-19!50;UBERON:0002616!2.10e-18!49;UBERON:0003056!2.13e-17!49;UBERON:0003080!6.91e-16!40;UBERON:0002780!8.81e-16!39;UBERON:0001890!8.81e-16!39;UBERON:0006240!8.81e-16!39;UBERON:0002020!1.85e-14!34;UBERON:0002791!3.89e-12!29;UBERON:0003528!3.89e-12!29;UBERON:0001893!3.89e-12!29;UBERON:0000956!9.64e-09!21;UBERON:0001869!9.64e-09!21;UBERON:0000203!9.64e-09!21;UBERON:0007811!5.31e-08!86;UBERON:0002619!5.39e-08!17;UBERON:0004111!6.15e-08!122;UBERON:0000025!2.41e-07!114;UBERON:0000153!2.53e-07!94;UBERON:0002021!6.59e-07!10;UBERON:0000411!6.59e-07!10;UBERON:0001950!6.59e-07!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,1.16e-25,75;UBERON:0001017,4.98e-25,73;UBERON:0004121,2.41e-24,95;UBERON:0000924,2.41e-24,95;UBERON:0006601,2.41e-24,95;UBERON:0002346,1.30e-21,64;UBERON:0003075,1.30e-21,64;UBERON:0007284,1.30e-21,64;UBERON:0000073,5.01e-21,54;UBERON:0010371,2.65e-20,73;UBERON:0001049,5.49e-20,52;UBERON:0005068,5.49e-20,52;UBERON:0006241,5.49e-20,52;UBERON:0007135,5.49e-20,52;UBERON:0000955,1.07e-17,47;UBERON:0006238,1.07e-17,47;UBERON:0010314,1.37e-17,92;UBERON:0003056,1.74e-17,49;UBERON:0002616,3.47e-17,46;UBERON:0003080,5.74e-16,40;UBERON:0002780,7.32e-16,39;UBERON:0001890,7.32e-16,39;UBERON:0006240,7.32e-16,39;UBERON:0002020,1.57e-14,34;UBERON:0003528,3.39e-12,29;UBERON:0002791,3.39e-12,29;UBERON:0001893,3.39e-12,29;UBERON:0000956,8.78e-09,21;UBERON:0001869,8.78e-09,21;UBERON:0000203,8.78e-09,21;UBERON:0002619,4.96e-08,17;UBERON:0004111,5.50e-08,122;UBERON:0000025,2.48e-07,114;UBERON:0002021,6.15e-07,10;UBERON:0000411,6.15e-07,10;UBERON:0001950,6.15e-07,10 | |||
|phase1_expression=9.44878197918284,1.74487703819681,0.454999239389536,0.60492842261366,0.500895729946347,1.00727563147134,1.86890112476421,0,0,0,0.171217968225505,0.0797721589953364,0,0,0,0.202475267389826,0,0.630924330716475,0.274228867211478,0,29.9352381331766,5.06383851124515,5.48519557191764,0.799962113967033,1.14704640533585,0.57423196411502,0,1.29282739611533,0.760093677825496,0.756090389279792,1.33038306393183,0.635030673459631,4.92051830067656,15.8481681015439,0.577703239502549,1.32987716286794,0.816677425049476,0.418531630736908,0,0,0.588231488031014,1.36609096991689,0,5.28766635497425,5.77848507951233,5.87349606917381,29.7308710852255,30.741547049643,38.2253957957981,34.997381833371,16.6583841734181,43.1257693094915,0.167782606057736,0,0,5.65970759279083,4.58453503902011,4.12537673821954,9.91350658212029,15.340738398889,21.5502677192101,10.8430250262122,8.00365316500025,9.89889689009539,8.89979726310277,13.4991221839759,26.0652096151012,61.8591471567703,3.7328260431052,5.53524347159932,5.25812403378455,9.71213346972932,11.4851641294839,4.89963196859816,2.87536413054709,2.75765635983006,13.2139057199266,7.91661496128164,5.9906547969935,11.4741070325269,10.9785172322892,10.4182674111352,10.3297709630511,10.6924895906019,11.7654650788144,12.9636577608414,7.97281412474976,8.01517617048792,8.40560745998343,4.30757892608677,3.18850937571846,0.860423876981386,1.3599426674155,2.15881276655127,0.649776417447669,0.448026887097336,6.31999890592883,3.06774580640504,4.1565760736459,5.3000936176551,10.4224130634744,2.56652954828636,2.54805239706646,0,6.27824018932521,5.82727690592727,9.0994400102661,5.36664234679582,0.258937883647172,5.78924342352817,3.46970653532272,3.04465478312141,2.99800146432876,1.95939432718409,2.23418543557839,4.39833069653864,1.97755974187499,1.15679485535929,0.884610551949874,0.970601099684455,1.10420759230197,2.42437626567611,1.86391761218122,4.39171195517321,3.56059401582874,0.255457055208591,1.43778149407104,1.79970819298022,0.889491589511453,4.49371918214468,4.11750542536764,8.29318723944905,9.90798625095976,5.8814555185976,8.3115217823824,9.40999325792994,3.66621709861139,3.35898820647251,6.06534620240819,2.94618598241064,2.99277018814219,5.0578462975364,5.76198815377118,4.82255417074288,5.17077393550092,6.79002717509704,8.62055865949505,9.05461797586555,2.58681591519411,4.16033376369202,2.63926686245923,3.06874025398605,3.05851974148158,2.43776516565517,2.67516777330327,4.17971960318836,1.40442637462647,1.28673953557358,1.42081749697796,2.89976081549703,2.34526059981096,3.78130329068131,0.946978942340841,2.36117078096885,3.39387648352232,2.32533944750408,5.90201483079162,4.55384835231961,1.6455984991348,1.80584210487005,1.13496333364198,1.46199987425332,1.75640092232841,1.74468344388483,7.14985825118033,6.5858951922742,0.660837565967596,0.793351699990633,1.70630600428187,1.16118335930219,1.41754207454303,0.605050573870028,0.889512175379481,2.28270751335071,0.474529061544512,2.14108641141214,0.754005626400808,1.79060824837036,2.9244613067868,2.69645822596266,0.864552199498777,0.796565093017469,3.41402221715547,3.19895835307241,2.25415471346161,3.05476991767971,4.84881217919064,5.47059395144485,7.14572869504107,9.15182917473533,8.32093257559286,12.8333050478673,1.1858105083486,0.333690211432188,1.17935397067922,0,0.405720242777006,0,0.763877555344259,0.287696137450811,1.13494658742525,0.274561413188081,1.43768206527355,1.48856379067401,1.24815069245824,1.26289438973556,0.179397413521912,1.92977408545347,7.02062122633098,2.27389694124582,1.30371981153621,2.8856664581782,2.11221223459652,3.51763140627813,6.18913466303636,7.41507861859636,2.36452716159286,3.32197034473162,5.42146213435456,4.7520361267564,4.31712454664739,5.49666422609744,3.01582567878545,2.71952841909355,0.983528546038072,1.10374698521893,2.72936002979246,5.04010252346474,2.45902418065013,0.252470927204373,3.78609863299508,2.73307121007647,4.73931475012158,2.62865677747807,3.56477878531831,2.26461224631066,2.42886421004937,4.09158201075837,1.18586333383957,10.2822821254978,4.9679029822894,4.09550888434687,2.76907830901079,9.89820737835213,3.98235415019888,2.6705869977048,2.41858845571801,1.88605079755898,1.77181135728464,2.45948118355142,4.39328098385976,3.27180356529755,2.13898427030833,1.8962205476149,5.27093042874994,4.12542172992747,11.234506989875,3.96134406868882,5.30370603509293,9.43082954139006,7.27094957933322,6.59964625127661,7.24015690649332,16.1366423030738,2.81606049676452,3.81297727554876,4.19003956304428,1.6488625294148,3.39075296061402,2.95533332147964,3.81991500810037,4.92422699235184,1.1659233465194,5.93360966433631,0,1.23832120777933,1.29636169158798,0.188368457004691,0.136694227721025,0.457556346413045,1.86976272993241,1.6794174278839,3.86959926652387,2.86401185404534,3.00519193902079,1.82987520414164,2.37611749807963,2.09088296014469,1.9652630737156,2.56242258131159,2.89287095038676,6.54389854960074,2.07383957266869,0,184.891283888414,1.64468200648377,2.64733584731356,3.50012139019286,3.616475057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| |phase1_expression=9.44878197918284,1.74487703819681,0.454999239389536,0.60492842261366,0.500895729946347,1.00727563147134,1.86890112476421,0,0,0,0.171217968225505,0.0797721589953364,0,0,0,0.202475267389826,0,0.630924330716475,0.274228867211478,0,29.9352381331766,5.06383851124515,5.48519557191764,0.799962113967033,1.14704640533585,0.57423196411502,0,1.29282739611533,0.760093677825496,0.756090389279792,1.33038306393183,0.635030673459631,4.92051830067656,15.8481681015439,0.577703239502549,1.32987716286794,0.816677425049476,0.418531630736908,0,0,0.588231488031014,1.36609096991689,0,5.28766635497425,5.77848507951233,5.87349606917381,29.7308710852255,30.741547049643,38.2253957957981,34.997381833371,16.6583841734181,43.1257693094915,0.167782606057736,0,0,5.65970759279083,4.58453503902011,4.12537673821954,9.91350658212029,15.340738398889,21.5502677192101,10.8430250262122,8.00365316500025,9.89889689009539,8.89979726310277,13.4991221839759,26.0652096151012,61.8591471567703,3.7328260431052,5.53524347159932,5.25812403378455,9.71213346972932,11.4851641294839,4.89963196859816,2.87536413054709,2.75765635983006,13.2139057199266,7.91661496128164,5.9906547969935,11.4741070325269,10.9785172322892,10.4182674111352,10.3297709630511,10.6924895906019,11.7654650788144,12.9636577608414,7.97281412474976,8.01517617048792,8.40560745998343,4.30757892608677,3.18850937571846,0.860423876981386,1.3599426674155,2.15881276655127,0.649776417447669,0.448026887097336,6.31999890592883,3.06774580640504,4.1565760736459,5.3000936176551,10.4224130634744,2.56652954828636,2.54805239706646,0,6.27824018932521,5.82727690592727,9.0994400102661,5.36664234679582,0.258937883647172,5.78924342352817,3.46970653532272,3.04465478312141,2.99800146432876,1.95939432718409,2.23418543557839,4.39833069653864,1.97755974187499,1.15679485535929,0.884610551949874,0.970601099684455,1.10420759230197,2.42437626567611,1.86391761218122,4.39171195517321,3.56059401582874,0.255457055208591,1.43778149407104,1.79970819298022,0.889491589511453,4.49371918214468,4.11750542536764,8.29318723944905,9.90798625095976,5.8814555185976,8.3115217823824,9.40999325792994,3.66621709861139,3.35898820647251,6.06534620240819,2.94618598241064,2.99277018814219,5.0578462975364,5.76198815377118,4.82255417074288,5.17077393550092,6.79002717509704,8.62055865949505,9.05461797586555,2.58681591519411,4.16033376369202,2.63926686245923,3.06874025398605,3.05851974148158,2.43776516565517,2.67516777330327,4.17971960318836,1.40442637462647,1.28673953557358,1.42081749697796,2.89976081549703,2.34526059981096,3.78130329068131,0.946978942340841,2.36117078096885,3.39387648352232,2.32533944750408,5.90201483079162,4.55384835231961,1.6455984991348,1.80584210487005,1.13496333364198,1.46199987425332,1.75640092232841,1.74468344388483,7.14985825118033,6.5858951922742,0.660837565967596,0.793351699990633,1.70630600428187,1.16118335930219,1.41754207454303,0.605050573870028,0.889512175379481,2.28270751335071,0.474529061544512,2.14108641141214,0.754005626400808,1.79060824837036,2.9244613067868,2.69645822596266,0.864552199498777,0.796565093017469,3.41402221715547,3.19895835307241,2.25415471346161,3.05476991767971,4.84881217919064,5.47059395144485,7.14572869504107,9.15182917473533,8.32093257559286,12.8333050478673,1.1858105083486,0.333690211432188,1.17935397067922,0,0.405720242777006,0,0.763877555344259,0.287696137450811,1.13494658742525,0.274561413188081,1.43768206527355,1.48856379067401,1.24815069245824,1.26289438973556,0.179397413521912,1.92977408545347,7.02062122633098,2.27389694124582,1.30371981153621,2.8856664581782,2.11221223459652,3.51763140627813,6.18913466303636,7.41507861859636,2.36452716159286,3.32197034473162,5.42146213435456,4.7520361267564,4.31712454664739,5.49666422609744,3.01582567878545,2.71952841909355,0.983528546038072,1.10374698521893,2.72936002979246,5.04010252346474,2.45902418065013,0.252470927204373,3.78609863299508,2.73307121007647,4.73931475012158,2.62865677747807,3.56477878531831,2.26461224631066,2.42886421004937,4.09158201075837,1.18586333383957,10.2822821254978,4.9679029822894,4.09550888434687,2.76907830901079,9.89820737835213,3.98235415019888,2.6705869977048,2.41858845571801,1.88605079755898,1.77181135728464,2.45948118355142,4.39328098385976,3.27180356529755,2.13898427030833,1.8962205476149,5.27093042874994,4.12542172992747,11.234506989875,3.96134406868882,5.30370603509293,9.43082954139006,7.27094957933322,6.59964625127661,7.24015690649332,16.1366423030738,2.81606049676452,3.81297727554876,4.19003956304428,1.6488625294148,3.39075296061402,2.95533332147964,3.81991500810037,4.92422699235184,1.1659233465194,5.93360966433631,0,1.23832120777933,1.29636169158798,0.188368457004691,0.136694227721025,0.457556346413045,1.86976272993241,1.6794174278839,3.86959926652387,2.86401185404534,3.00519193902079,1.82987520414164,2.37611749807963,2.09088296014469,1.9652630737156,2.56242258131159,2.89287095038676,6.54389854960074,2.07383957266869,0,184.891283888414,1.64468200648377,2.64733584731356,3.50012139019286,3.616475057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| ||
|short_description=p1@BC022687 | |||
}} | }} |
Latest revision as of 09:28, 26 September 2015
Short description: | p1@BC022687 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_BC022687_5end |
Coexpression cluster: | MCL_coexpression_mm9:0 |
Association with transcript: | 0bp_to_ENSMUST00000037014, NM_145450, uc007pfg.1, uc007pfh.1_5end |
EntrezGene: | BC022687 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ectodermal cell | 2.49e-13 | 44 |
neurectodermal cell | 2.49e-13 | 44 |
neural cell | 7.70e-13 | 43 |
CNS neuron (sensu Vertebrata) | 4.68e-09 | 23 |
neuroblast (sensu Vertebrata) | 4.68e-09 | 23 |
electrically responsive cell | 7.40e-09 | 39 |
electrically active cell | 7.40e-09 | 39 |
neuron | 1.13e-07 | 33 |
neuronal stem cell | 1.13e-07 | 33 |
neuroblast | 1.13e-07 | 33 |
electrically signaling cell | 1.13e-07 | 33 |
embryonic cell | 3.80e-07 | 70 |
migratory neural crest cell | 4.95e-07 | 10 |
neuron associated cell | 4.95e-07 | 10 |
glial cell (sensu Vertebrata) | 4.95e-07 | 10 |
neuron associated cell (sensu Vertebrata) | 4.95e-07 | 10 |
glial cell | 4.95e-07 | 10 |
glioblast | 4.95e-07 | 10 |
glioblast (sensu Vertebrata) | 4.95e-07 | 10 |
oligodendrocyte precursor cell | 8.98e-07 | 8 |