FFCP PHASE1:Mm9::chr2:24909894..24909911,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=56876 | |EntrezGene=56876 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1 | |||
|TSSclassifier=NA | |||
|UniProt=Q99NF2,A2AJ97,Q3TNG2,A2AJ96,Q3TY90 | |UniProt=Q99NF2,A2AJ97,Q3TNG2,A2AJ96,Q3TY90 | ||
|association_with_transcript=0bp_to_ENSMUST00000006646,NM_001039386,NM_001039387,NM_001177654,NM_001177655,NM_020276,uc008iqa.1,uc008iqb.1,uc008iqc.1,uc008iqd.1,uc008iqe.1,uc012brt.1_5end | |association_with_transcript=0bp_to_ENSMUST00000006646,NM_001039386,NM_001039387,NM_001177654,NM_001177655,NM_020276,uc008iqa.1,uc008iqb.1,uc008iqc.1,uc008iqd.1,uc008iqe.1,uc012brt.1_5end | ||
|cluster_id=chr2:24909894..24909911,+ | |||
|description=CAGE_peak_2_at_Nelf_5end | |description=CAGE_peak_2_at_Nelf_5end | ||
|id=chr2:24909894..24909911,+ | |id=chr2:24909894..24909911,+ | ||
|ontology_enrichment_celltype=CL:0000117!5.91e-13!23;CL:0000337!5.91e-13!23;CL:0000221!1.07e-12!44;CL:0000133!1.07e-12!44;CL:0002319!2.58e-12!43;CL:0000540!1.64e-10!33;CL:0000047!1.64e-10!33;CL:0000031!1.64e-10!33;CL:0000404!1.64e-10!33;CL:0000055!3.02e-09!50;CL:0000393!8.26e-08!39;CL:0000211!8.26e-08!39 | |ontology_enrichment_celltype=CL:0000117!5.91e-13!23;CL:0000337!5.91e-13!23;CL:0000221!1.07e-12!44;CL:0000133!1.07e-12!44;CL:0002319!2.58e-12!43;CL:0000540!1.64e-10!33;CL:0000047!1.64e-10!33;CL:0000031!1.64e-10!33;CL:0000404!1.64e-10!33;CL:0000055!3.02e-09!50;CL:0000393!8.26e-08!39;CL:0000211!8.26e-08!39 | ||
|ontology_enrichment_celltype_v019_2=CL:0000117,5.41e-13,23;CL:0000337,5.41e-13,23;CL:0000221,9.78e-13,44;CL:0000133,9.78e-13,44;CL:0002319,2.38e-12,43;CL:0000540,1.53e-10,33;CL:0000047,1.53e-10,33;CL:0000031,1.53e-10,33;CL:0000404,1.53e-10,33;CL:0000393,7.87e-08,39;CL:0000211,7.87e-08,39;CL:0002321,9.88e-07,70 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.12e-31!73;UBERON:0005743!1.12e-31!73;UBERON:0000073!1.15e-30!75;UBERON:0001016!1.15e-30!75;UBERON:0001049!5.78e-28!52;UBERON:0005068!5.78e-28!52;UBERON:0006241!5.78e-28!52;UBERON:0007135!5.78e-28!52;UBERON:0000955!1.65e-27!50;UBERON:0006238!1.65e-27!50;UBERON:0002616!7.86e-27!49;UBERON:0000033!1.42e-26!63;UBERON:0004121!1.95e-25!102;UBERON:0000924!1.95e-25!102;UBERON:0006601!1.95e-25!102;UBERON:0002346!3.19e-24!71;UBERON:0003075!3.19e-24!71;UBERON:0007284!3.19e-24!71;UBERON:0003080!4.40e-22!40;UBERON:0003056!1.21e-21!49;UBERON:0002780!1.91e-21!39;UBERON:0001890!1.91e-21!39;UBERON:0006240!1.91e-21!39;UBERON:0002020!5.62e-20!34;UBERON:0002791!1.56e-17!29;UBERON:0003528!1.56e-17!29;UBERON:0001893!1.56e-17!29;UBERON:0000956!3.90e-13!21;UBERON:0001869!3.90e-13!21;UBERON:0000203!3.90e-13!21;UBERON:0007811!1.63e-11!86;UBERON:0000153!5.85e-11!94;UBERON:0002619!7.98e-11!17;UBERON:0000025!1.34e-10!114;UBERON:0004111!4.01e-10!122;UBERON:0002021!1.21e-07!10;UBERON:0000411!1.21e-07!10;UBERON:0001950!1.21e-07!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,8.88e-32,73;UBERON:0001016,9.16e-31,75;UBERON:0000073,1.17e-29,54;UBERON:0001049,4.70e-28,52;UBERON:0005068,4.70e-28,52;UBERON:0006241,4.70e-28,52;UBERON:0007135,4.70e-28,52;UBERON:0004121,4.06e-27,95;UBERON:0000924,4.06e-27,95;UBERON:0006601,4.06e-27,95;UBERON:0002346,9.75e-27,64;UBERON:0003075,9.75e-27,64;UBERON:0007284,9.75e-27,64;UBERON:0000955,2.04e-25,47;UBERON:0006238,2.04e-25,47;UBERON:0010371,6.92e-25,73;UBERON:0002616,9.48e-25,46;UBERON:0003080,3.75e-22,40;UBERON:0003056,1.03e-21,49;UBERON:0002780,1.64e-21,39;UBERON:0001890,1.64e-21,39;UBERON:0006240,1.64e-21,39;UBERON:0002020,4.87e-20,34;UBERON:0010314,4.58e-19,92;UBERON:0003528,1.37e-17,29;UBERON:0002791,1.37e-17,29;UBERON:0001893,1.37e-17,29;UBERON:0000956,3.56e-13,21;UBERON:0001869,3.56e-13,21;UBERON:0000203,3.56e-13,21;UBERON:0002619,7.43e-11,17;UBERON:0000025,1.17e-10,114;UBERON:0004111,3.52e-10,122;UBERON:0002021,1.15e-07,10;UBERON:0000411,1.15e-07,10;UBERON:0001950,1.15e-07,10 | |||
|phase1_expression=7.36684696682052,7.67745896806594,4.54999239389536,2.41971369045464,3.00537437967808,3.02182689441402,3.97141489012394,1.03298658753261,0.140788722151667,0,1.36974374580404,0.8774937489487,0.856003649656029,1.04904482902797,0.999329285446988,0.607425802169478,0,2.20823515750766,1.37114433605739,2.97072756258621,9.35476191661768,0.496454756004426,0.522399578277871,2.23989391910769,1.37645568640302,3.44539178469012,0.86152399231815,1.72376986148711,0.380046838912748,1.26015064879965,1.77384408524244,1.27006134691926,0.61506478758457,0,2.02196133825892,2.1610503896604,1.22501613757421,0,0.7813353445238,0,0,0,0.485510353031154,1.88845226963366,2.53442328048786,1.83546752161682,6.25913075478431,5.23260375313072,4.61340983742391,5.63846707315422,3.77963338388479,5.75010257459886,2.18117387875057,0,1.00828139742739,1.02903774414379,2.0057340795713,2.06268836910977,15.578367486189,13.2247744818008,10.1413024560989,3.04960078862219,2.66788438833342,2.2497492932035,2.96659908770092,0,8.38880309451533,18.8266969607562,20.0120951755362,19.7108669964268,21.0324961351382,17.424710048632,14.3564551618549,14.5764051065795,14.2809751817172,20.2228133054205,23.1243350098716,37.2847027208748,30.26048705148,13.1886287730194,15.8273623432169,15.6274011167028,18.9844439320939,11.2552522006336,17.4190002465564,9.72274332063103,14.2371680799103,9.31997229126503,1.66597625333005,2.94729084416464,3.76823835312181,1.72084775396277,1.3599426674155,0.539703191637817,3.24888208723835,3.13618820968135,3.37066608316204,2.89731548382698,1.81850203222008,1.7666978725517,6.33795388995062,2.56652954828636,7.64415719119937,0,0.649473123033642,0.760079596425296,1.01104889002957,2.96878087269556,1.55362730188303,3.56261133755579,3.29622120855658,1.52232739156071,2.30615497256059,1.80867168663147,2.58695155698551,2.89033160058254,0.494389935468748,2.02439099687876,0,3.39710384889559,1.10420759230197,0.969750506270444,3.72783522436244,7.61230072230023,5.23616767033638,1.78819938646014,0.718890747035522,0.599902730993408,0.508280908292259,22.4685959107234,33.8550446085784,36.4397621127307,31.1145533144175,33.4987249102733,35.9473317088039,30.6635987198062,4.07357455401265,1.8661045591514,6.06534620240819,2.94618598241064,2.99277018814219,2.06911893990126,5.04173963454978,3.16480117455002,5.3748834329549,4.61209393025459,4.12287588062807,4.39795730256327,1.94011193639558,3.59301552318857,2.46331573829528,5.2606975782618,4.44875598760957,1.39300866608867,2.88094990971121,2.7864797354589,0.702213187313235,1.02939162845886,0.284163499395593,3.31401236056803,1.64168241986767,2.88099298337624,4.26140524053378,3.14822770795846,3.08534225774756,2.32533944750408,3.21928081679543,1.86824547787471,2.46839774870221,0.985004784474571,1.54030738137126,2.19299981137998,2.19550115291051,2.41571553768669,53.6239368838525,35.9137097203703,2.97376904685418,0.793351699990633,1.2797295032114,2.32236671860439,2.44848176511977,2.21851877085677,2.2237804384487,2.28270751335071,0.474529061544512,0.988193728344065,1.50801125280162,1.1937388322469,0.974820435595601,1.79763881730844,2.16138049874694,1.1948476395262,3.03468641524931,2.62771579002376,3.38123207019241,2.24016460629846,4.07300223052014,3.64706263429657,2.90888070771584,2.80459281161244,2.66897837330337,1.85095745882701,2.96452627087149,0.667380422864376,1.57247196090562,1.12431056192427,0.405720242777006,0.482354319504834,0.25462585178142,2.01387296215567,1.29708181420028,1.92192989231657,0,1.86070473834252,1.24815069245824,2.77836765741823,2.15276896226295,3.37710464954357,3.14080423283228,2.65287976478679,3.7481944581666,2.71592137240301,2.34690248288502,2.68010011906905,2.61848004974615,3.51240566144038,3.94087860265477,2.6575762757853,3.02964060449226,2.94953966488328,3.45369963731791,2.60368305446721,0,0.54390568381871,1.96705709207614,3.58717770196152,18.7844190285717,16.4096361229084,3.11476396215683,1.26235463602186,1.57754109708128,4.68526493155966,2.36965737506079,2.62865677747807,2.45078541490634,3.67999490025482,2.02405350837447,2.92255857911312,3.16230222357219,22.4924921495265,3.97432238583152,5.69809931735217,3.74640006513225,5.44401405809367,1.32745138339963,0.971122544619926,2.41858845571801,1.88605079755898,2.36241514304618,1.53717573971964,2.06742634534577,2.18120237686503,2.49548164869305,1.26414703174326,5.27093042874994,1.03135543248187,5.7874732978144,4.50152735078276,5.04498866752743,5.14408884075822,6.56158864476412,8.74007206250146,7.0756078858912,5.78483403317739,0.469343416127421,1.69465656691056,1.32317038832977,2.80306630000516,1.93757312035087,2.53314284698255,2.26807453605959,1.96969079694074,2.33184669303881,18.17167959703,1.02522528478712,3.09580301944834,1.11116716421827,1.50694765603753,0.956859594047176,1.37266903923914,1.35982743995084,1.81936888020755,2.21119958087078,4.77335309007557,3.16335993581135,2.64315307264903,2.16010681643603,1.46361807210128,3.27543845619266,2.29269388854195,3.55409859618945,1.04702376793612,4.40690909192096,1.24267862617385,2.25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| |phase1_expression=7.36684696682052,7.67745896806594,4.54999239389536,2.41971369045464,3.00537437967808,3.02182689441402,3.97141489012394,1.03298658753261,0.140788722151667,0,1.36974374580404,0.8774937489487,0.856003649656029,1.04904482902797,0.999329285446988,0.607425802169478,0,2.20823515750766,1.37114433605739,2.97072756258621,9.35476191661768,0.496454756004426,0.522399578277871,2.23989391910769,1.37645568640302,3.44539178469012,0.86152399231815,1.72376986148711,0.380046838912748,1.26015064879965,1.77384408524244,1.27006134691926,0.61506478758457,0,2.02196133825892,2.1610503896604,1.22501613757421,0,0.7813353445238,0,0,0,0.485510353031154,1.88845226963366,2.53442328048786,1.83546752161682,6.25913075478431,5.23260375313072,4.61340983742391,5.63846707315422,3.77963338388479,5.75010257459886,2.18117387875057,0,1.00828139742739,1.02903774414379,2.0057340795713,2.06268836910977,15.578367486189,13.2247744818008,10.1413024560989,3.04960078862219,2.66788438833342,2.2497492932035,2.96659908770092,0,8.38880309451533,18.8266969607562,20.0120951755362,19.7108669964268,21.0324961351382,17.424710048632,14.3564551618549,14.5764051065795,14.2809751817172,20.2228133054205,23.1243350098716,37.2847027208748,30.26048705148,13.1886287730194,15.8273623432169,15.6274011167028,18.9844439320939,11.2552522006336,17.4190002465564,9.72274332063103,14.2371680799103,9.31997229126503,1.66597625333005,2.94729084416464,3.76823835312181,1.72084775396277,1.3599426674155,0.539703191637817,3.24888208723835,3.13618820968135,3.37066608316204,2.89731548382698,1.81850203222008,1.7666978725517,6.33795388995062,2.56652954828636,7.64415719119937,0,0.649473123033642,0.760079596425296,1.01104889002957,2.96878087269556,1.55362730188303,3.56261133755579,3.29622120855658,1.52232739156071,2.30615497256059,1.80867168663147,2.58695155698551,2.89033160058254,0.494389935468748,2.02439099687876,0,3.39710384889559,1.10420759230197,0.969750506270444,3.72783522436244,7.61230072230023,5.23616767033638,1.78819938646014,0.718890747035522,0.599902730993408,0.508280908292259,22.4685959107234,33.8550446085784,36.4397621127307,31.1145533144175,33.4987249102733,35.9473317088039,30.6635987198062,4.07357455401265,1.8661045591514,6.06534620240819,2.94618598241064,2.99277018814219,2.06911893990126,5.04173963454978,3.16480117455002,5.3748834329549,4.61209393025459,4.12287588062807,4.39795730256327,1.94011193639558,3.59301552318857,2.46331573829528,5.2606975782618,4.44875598760957,1.39300866608867,2.88094990971121,2.7864797354589,0.702213187313235,1.02939162845886,0.284163499395593,3.31401236056803,1.64168241986767,2.88099298337624,4.26140524053378,3.14822770795846,3.08534225774756,2.32533944750408,3.21928081679543,1.86824547787471,2.46839774870221,0.985004784474571,1.54030738137126,2.19299981137998,2.19550115291051,2.41571553768669,53.6239368838525,35.9137097203703,2.97376904685418,0.793351699990633,1.2797295032114,2.32236671860439,2.44848176511977,2.21851877085677,2.2237804384487,2.28270751335071,0.474529061544512,0.988193728344065,1.50801125280162,1.1937388322469,0.974820435595601,1.79763881730844,2.16138049874694,1.1948476395262,3.03468641524931,2.62771579002376,3.38123207019241,2.24016460629846,4.07300223052014,3.64706263429657,2.90888070771584,2.80459281161244,2.66897837330337,1.85095745882701,2.96452627087149,0.667380422864376,1.57247196090562,1.12431056192427,0.405720242777006,0.482354319504834,0.25462585178142,2.01387296215567,1.29708181420028,1.92192989231657,0,1.86070473834252,1.24815069245824,2.77836765741823,2.15276896226295,3.37710464954357,3.14080423283228,2.65287976478679,3.7481944581666,2.71592137240301,2.34690248288502,2.68010011906905,2.61848004974615,3.51240566144038,3.94087860265477,2.6575762757853,3.02964060449226,2.94953966488328,3.45369963731791,2.60368305446721,0,0.54390568381871,1.96705709207614,3.58717770196152,18.7844190285717,16.4096361229084,3.11476396215683,1.26235463602186,1.57754109708128,4.68526493155966,2.36965737506079,2.62865677747807,2.45078541490634,3.67999490025482,2.02405350837447,2.92255857911312,3.16230222357219,22.4924921495265,3.97432238583152,5.69809931735217,3.74640006513225,5.44401405809367,1.32745138339963,0.971122544619926,2.41858845571801,1.88605079755898,2.36241514304618,1.53717573971964,2.06742634534577,2.18120237686503,2.49548164869305,1.26414703174326,5.27093042874994,1.03135543248187,5.7874732978144,4.50152735078276,5.04498866752743,5.14408884075822,6.56158864476412,8.74007206250146,7.0756078858912,5.78483403317739,0.469343416127421,1.69465656691056,1.32317038832977,2.80306630000516,1.93757312035087,2.53314284698255,2.26807453605959,1.96969079694074,2.33184669303881,18.17167959703,1.02522528478712,3.09580301944834,1.11116716421827,1.50694765603753,0.956859594047176,1.37266903923914,1.35982743995084,1.81936888020755,2.21119958087078,4.77335309007557,3.16335993581135,2.64315307264903,2.16010681643603,1.46361807210128,3.27543845619266,2.29269388854195,3.55409859618945,1.04702376793612,4.40690909192096,1.24267862617385,2.25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| ||
|short_description=p2@Nelf | |short_description=p2@Nelf | ||
}} | }} |
Latest revision as of 09:52, 26 September 2015
Short description: | p2@Nelf |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Nelf_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 0bp_to_ENSMUST00000006646, NM_001039386, NM_001039387, NM_001177654, NM_001177655, NM_020276, uc008iqa.1, uc008iqb.1, uc008iqc.1, uc008iqd.1, uc008iqe.1, uc012brt.1_5end |
EntrezGene: | Nelf |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 5.41e-13 | 23 |
neuroblast (sensu Vertebrata) | 5.41e-13 | 23 |
ectodermal cell | 9.78e-13 | 44 |
neurectodermal cell | 9.78e-13 | 44 |
neural cell | 2.38e-12 | 43 |
neuron | 1.53e-10 | 33 |
neuronal stem cell | 1.53e-10 | 33 |
neuroblast | 1.53e-10 | 33 |
electrically signaling cell | 1.53e-10 | 33 |
electrically responsive cell | 7.87e-08 | 39 |
electrically active cell | 7.87e-08 | 39 |
embryonic cell | 9.88e-07 | 70 |