FFCP PHASE1:Mm9::chr6:113433522..113433565,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=171508 | |EntrezGene=171508 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=3536 | |||
|TSSclassifier=NA | |||
|UniProt=A8C1T7,Q91XD7 | |UniProt=A8C1T7,Q91XD7 | ||
|association_with_transcript=0bp_to_NM_133930,uc009dgn.1,uc009dgo.1_5end | |association_with_transcript=0bp_to_NM_133930,uc009dgn.1,uc009dgo.1_5end | ||
|cluster_id=chr6:113433522..113433565,+ | |||
|description=CAGE_peak_1_at_Creld1_5end | |description=CAGE_peak_1_at_Creld1_5end | ||
|id=chr6:113433522..113433565,+ | |id=chr6:113433522..113433565,+ | ||
|ontology_enrichment_celltype=CL:0000055!9.11e-13!50;CL:0000221!1.97e-10!44;CL:0000133!1.97e-10!44;CL:0002319!2.59e-10!43;CL:0002321!3.67e-08!70;CL:0000220!3.67e-08!70;CL:0000393!7.43e-08!39;CL:0000211!7.43e-08!39;CL:0002453!8.89e-07!8 | |ontology_enrichment_celltype=CL:0000055!9.11e-13!50;CL:0000221!1.97e-10!44;CL:0000133!1.97e-10!44;CL:0002319!2.59e-10!43;CL:0002321!3.67e-08!70;CL:0000220!3.67e-08!70;CL:0000393!7.43e-08!39;CL:0000211!7.43e-08!39;CL:0002453!8.89e-07!8 | ||
|ontology_enrichment_celltype_v019_2=CL:0000221,1.95e-10,44;CL:0000133,1.95e-10,44;CL:0002319,2.57e-10,43;CL:0002321,3.34e-08,70;CL:0000393,7.38e-08,39;CL:0000211,7.38e-08,39;CL:0002453,8.84e-07,8 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004111!1.37e-25!122;UBERON:0000025!2.33e-25!114;UBERON:0000073!9.88e-23!75;UBERON:0001016!9.88e-23!75;UBERON:0001017!2.02e-22!73;UBERON:0005743!2.02e-22!73;UBERON:0004121!1.04e-18!102;UBERON:0000924!1.04e-18!102;UBERON:0006601!1.04e-18!102;UBERON:0001049!3.06e-15!52;UBERON:0005068!3.06e-15!52;UBERON:0006241!3.06e-15!52;UBERON:0007135!3.06e-15!52;UBERON:0000955!9.07e-15!50;UBERON:0006238!9.07e-15!50;UBERON:0002616!3.33e-14!49;UBERON:0002346!5.62e-14!71;UBERON:0003075!5.62e-14!71;UBERON:0007284!5.62e-14!71;UBERON:0000033!7.98e-12!63;UBERON:0003080!9.24e-10!40;UBERON:0002780!2.59e-09!39;UBERON:0001890!2.59e-09!39;UBERON:0006240!2.59e-09!39;UBERON:0000477!5.18e-09!154;UBERON:0003103!2.29e-08!43;UBERON:0002020!3.89e-08!34;UBERON:0003914!8.83e-08!47;UBERON:0003056!1.30e-07!49;UBERON:0000468!2.13e-07!333;UBERON:0003076!8.14e-07!12;UBERON:0003057!8.14e-07!12 | |ontology_enrichment_uberon=UBERON:0004111!1.37e-25!122;UBERON:0000025!2.33e-25!114;UBERON:0000073!9.88e-23!75;UBERON:0001016!9.88e-23!75;UBERON:0001017!2.02e-22!73;UBERON:0005743!2.02e-22!73;UBERON:0004121!1.04e-18!102;UBERON:0000924!1.04e-18!102;UBERON:0006601!1.04e-18!102;UBERON:0001049!3.06e-15!52;UBERON:0005068!3.06e-15!52;UBERON:0006241!3.06e-15!52;UBERON:0007135!3.06e-15!52;UBERON:0000955!9.07e-15!50;UBERON:0006238!9.07e-15!50;UBERON:0002616!3.33e-14!49;UBERON:0002346!5.62e-14!71;UBERON:0003075!5.62e-14!71;UBERON:0007284!5.62e-14!71;UBERON:0000033!7.98e-12!63;UBERON:0003080!9.24e-10!40;UBERON:0002780!2.59e-09!39;UBERON:0001890!2.59e-09!39;UBERON:0006240!2.59e-09!39;UBERON:0000477!5.18e-09!154;UBERON:0003103!2.29e-08!43;UBERON:0002020!3.89e-08!34;UBERON:0003914!8.83e-08!47;UBERON:0003056!1.30e-07!49;UBERON:0000468!2.13e-07!333;UBERON:0003076!8.14e-07!12;UBERON:0003057!8.14e-07!12 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0004111,1.34e-25,122;UBERON:0000025,2.27e-25,114;UBERON:0001016,9.67e-23,75;UBERON:0001017,1.98e-22,73;UBERON:0010314,2.77e-19,92;UBERON:0004121,7.28e-18,95;UBERON:0000924,7.28e-18,95;UBERON:0006601,7.28e-18,95;UBERON:0000073,4.11e-16,54;UBERON:0001049,3.01e-15,52;UBERON:0005068,3.01e-15,52;UBERON:0006241,3.01e-15,52;UBERON:0007135,3.01e-15,52;UBERON:0000955,2.20e-13,47;UBERON:0006238,2.20e-13,47;UBERON:0002346,2.30e-13,64;UBERON:0003075,2.30e-13,64;UBERON:0007284,2.30e-13,64;UBERON:0002616,7.82e-13,46;UBERON:0010371,7.48e-12,73;UBERON:0003080,9.16e-10,40;UBERON:0002780,2.57e-09,39;UBERON:0001890,2.57e-09,39;UBERON:0006240,2.57e-09,39;UBERON:0003103,2.27e-08,43;UBERON:0002020,3.87e-08,34;UBERON:0003914,8.78e-08,47;UBERON:0003056,1.29e-07,49;UBERON:0003076,8.10e-07,12;UBERON:0003057,8.10e-07,12 | |||
|phase1_expression=13.9329496981171,0.697950815278722,1.36499771816861,0,0.500895729946347,3.02182689441402,4.20502753071946,0.516493293766305,1.54867594366833,0.468129052643987,0.68487187290202,0.8774937489487,0.342401459862411,0.437102012094987,1.66554880907831,2.02475267389826,0.699561878128147,1.10411757875383,0.548457734422955,1.27316895539409,18.28430738248,0.695036658406197,0,4.15980299262857,3.21172993494038,0,0.430761996159075,1.939241094173,1.52018735565099,1.51218077855958,4.8780712344167,15.8757668364908,18.4519436275371,0,3.75507105676657,5.31950865147176,3.47087905646027,0.418531630736908,0,2.09409497589519,0,0,0.485510353031154,25.5570540490422,23.9249557678054,20.9243297464317,92.3221786330686,73.6925028565909,79.3067119671443,69.4114739695192,48.5752883040008,53.1884488150395,1.17447824240415,0,0,48.8792928468299,49.8568185493437,54.6612417814089,14.9714181036102,21.1596391708813,15.8457850876545,37.6117430596737,35.5717918444456,42.2952867122258,69.2206453796882,52.5755285060114,58.1224214405705,75.6910061483462,7.8804105354443,11.2054928815303,9.67494822216357,34.5637691128602,36.2224407160646,10.2892271340561,11.3097655801519,23.8996884518605,27.5289702498472,38.8169507778971,38.7088463805734,13.3205150607496,13.5401712531566,15.106487746146,39.6439858581961,29.826418331679,36.213184723104,33.2930301585245,37.4437520501641,15.2847545576746,13.5549886066399,31.1354827639956,31.3053647797812,19.7897491705719,25.8389106808945,55.5894287386952,59.7794304051856,64.5158717420163,24.4373291029248,0,0,0.35333957451034,19.5772353489586,0,0,0,33.7726023977494,30.909903587962,28.3093689208279,25.0062696584741,10.0985774622397,28.9462171176408,15.0932234286538,9.43842982767638,22.8309342283498,15.0722640552623,18.1086608988985,23.24831939599,13.1013332899218,56.1045504849257,9.73071607144862,12.7795811458453,10.3795513676385,11.1521308221101,5.59175283654366,37.1831612204665,37.4909605196085,4.34276993854605,2.87556298814209,1.79970819298022,4.06624726633807,36.2493347359671,40.7175536508578,16.5863744788981,42.4131341269155,37.0787413128979,43.2199132683885,35.5308366118389,7.53611292492341,13.8091737377203,20.975988949995,11.7847439296425,11.0602376518298,9.65588838620586,12.4242869565691,7.9873553452929,7.34794190834341,7.30248205623644,11.6190138454064,16.815719098036,4.095791865724,6.80781888604149,4.22282697993477,5.47989331068937,6.11703948296315,9.75106066262066,6.99659263787008,7.36426787228425,6.31991868581911,5.40430604940902,2.55747149456033,30.0332370176478,16.8858763186389,17.4660199617184,26.5154103855435,19.479658942993,18.357786433598,16.2773761325285,20.6570519077707,16.8142093008724,18.9243827400503,21.6701052584406,25.293468578307,19.2983983401439,29.4197154490008,29.9280313835629,34.2772616159527,13.1717903845484,0.991256348951394,4.7601101999438,8.10495352033889,10.2184135618593,9.40732467651281,7.46229041106367,6.89371935919098,8.3699275489526,6.64340686162316,2.63518327558417,3.51869292320377,6.36660710531683,6.04388670069272,7.19055526923377,6.26800344636613,5.97423819763102,18.0184505905428,11.4248512609729,27.0498565615393,15.4775009162439,13.7706265889014,10.5203729835478,14.987059298449,12.3992524302866,16.6418651511857,18.7563689161137,31.1275258441506,7.84171996865642,6.2898878436225,4.72210436008193,4.05720242777006,8.44120059133459,8.91190481234969,21.0018180339092,25.9416362840057,13.1789478330279,18.6898668485561,25.6777253891267,21.2185617717901,27.7836765741823,32.2915344339442,44.3848039654298,26.7892125741577,8.90609635321278,14.0149879740142,10.0149600607361,15.4895563870411,21.2732946951106,21.4239276797412,17.1717610114863,14.5024332577696,13.730810758224,18.656207932926,25.2349504662237,21.2402527695052,25.3135852517645,25.6345182696763,33.1782467129413,9.34352118736169,11.313406598494,39.0137933670334,31.0610969469338,0,33.5786333181816,23.9786246756355,23.4263246577983,26.9279247165999,20.3123478259669,26.9586395639697,16.9845918473299,26.3126956088681,32.1481443702443,22.1361155650053,42.7357350841003,25.2653351670718,9.61554259803178,4.0721739838394,14.6823409445557,17.2568679841952,8.98288353773431,8.46505959501303,11.127699705598,12.993283286754,14.4494519533646,6.97756391554197,9.08834323693764,14.6163925137736,7.58488219045958,14.7586052004998,14.4389760547462,54.8107765263599,16.0254373687866,20.568030721458,21.8623775732224,27.1330557472679,22.1177333826567,23.3659609255012,29.8375650132307,29.3339635079638,25.4198485036584,13.0111754852428,20.1161228588606,8.88054346827481,10.7357006372117,8.8335534562321,8.042904087508,4.37221254944776,40.7935664423121,6.32222258952055,6.3979929068599,5.37064129372164,5.46268525313604,2.1871076435364,4.34678529092393,3.90950388985867,2.93898049879682,4.14599921413271,14.3200592702267,9.80641580101519,10.3692928234693,6.69633113095168,8.78170843260769,8.51613998610093,11.0588764035553,11.7367907129977,12.5642852152334,8.94343315713371,6.21339313086926,1.12738587736838,10.3166416770345,6.28742263736971,7.000242780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| ||
|short_description=p1@Creld1 | |short_description=p1@Creld1 | ||
}} | }} |
Latest revision as of 11:32, 26 September 2015
Short description: | p1@Creld1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Creld1_5end |
Coexpression cluster: | MCL_coexpression_mm9:3536 |
Association with transcript: | 0bp_to_NM_133930, uc009dgn.1, uc009dgo.1_5end |
EntrezGene: | Creld1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ectodermal cell | 1.95e-10 | 44 |
neurectodermal cell | 1.95e-10 | 44 |
neural cell | 2.57e-10 | 43 |
embryonic cell | 3.34e-08 | 70 |
electrically responsive cell | 7.38e-08 | 39 |
electrically active cell | 7.38e-08 | 39 |
oligodendrocyte precursor cell | 8.84e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
anatomical conduit | 1.34e-25 | 122 |
tube | 2.27e-25 | 114 |
nervous system | 9.67e-23 | 75 |
central nervous system | 1.98e-22 | 73 |
structure with developmental contribution from neural crest | 2.77e-19 | 92 |
ectoderm-derived structure | 7.28e-18 | 95 |
ectoderm | 7.28e-18 | 95 |
presumptive ectoderm | 7.28e-18 | 95 |
regional part of nervous system | 4.11e-16 | 54 |
neural tube | 3.01e-15 | 52 |
neural rod | 3.01e-15 | 52 |
future spinal cord | 3.01e-15 | 52 |
neural keel | 3.01e-15 | 52 |
brain | 2.20e-13 | 47 |
future brain | 2.20e-13 | 47 |
neurectoderm | 2.30e-13 | 64 |
neural plate | 2.30e-13 | 64 |
presumptive neural plate | 2.30e-13 | 64 |
regional part of brain | 7.82e-13 | 46 |
ecto-epithelium | 7.48e-12 | 73 |
anterior neural tube | 9.16e-10 | 40 |
regional part of forebrain | 2.57e-09 | 39 |
forebrain | 2.57e-09 | 39 |
future forebrain | 2.57e-09 | 39 |
compound organ | 2.27e-08 | 43 |
gray matter | 3.87e-08 | 34 |
epithelial tube | 8.78e-08 | 47 |
pre-chordal neural plate | 1.29e-07 | 49 |
posterior neural tube | 8.10e-07 | 12 |
chordal neural plate | 8.10e-07 | 12 |