FFCP PHASE1:Mm9::chr6:113433522..113433565,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chr6:113433522..113433565,+ to FFCP PHASE1:Mm9::chr6:113433522..113433565,+: NSchange) |
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(7 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=171508 | |EntrezGene=171508 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=3536 | |||
|TSSclassifier=NA | |||
|UniProt=A8C1T7,Q91XD7 | |UniProt=A8C1T7,Q91XD7 | ||
|association_with_transcript=0bp_to_NM_133930,uc009dgn.1,uc009dgo.1_5end | |||
|cluster_id=chr6:113433522..113433565,+ | |||
|description=CAGE_peak_1_at_Creld1_5end | |||
|id=chr6:113433522..113433565,+ | |||
|ontology_enrichment_celltype=CL:0000055!9.11e-13!50;CL:0000221!1.97e-10!44;CL:0000133!1.97e-10!44;CL:0002319!2.59e-10!43;CL:0002321!3.67e-08!70;CL:0000220!3.67e-08!70;CL:0000393!7.43e-08!39;CL:0000211!7.43e-08!39;CL:0002453!8.89e-07!8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000221,1.95e-10,44;CL:0000133,1.95e-10,44;CL:0002319,2.57e-10,43;CL:0002321,3.34e-08,70;CL:0000393,7.38e-08,39;CL:0000211,7.38e-08,39;CL:0002453,8.84e-07,8 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004111!1.37e-25!122;UBERON:0000025!2.33e-25!114;UBERON:0000073!9.88e-23!75;UBERON:0001016!9.88e-23!75;UBERON:0001017!2.02e-22!73;UBERON:0005743!2.02e-22!73;UBERON:0004121!1.04e-18!102;UBERON:0000924!1.04e-18!102;UBERON:0006601!1.04e-18!102;UBERON:0001049!3.06e-15!52;UBERON:0005068!3.06e-15!52;UBERON:0006241!3.06e-15!52;UBERON:0007135!3.06e-15!52;UBERON:0000955!9.07e-15!50;UBERON:0006238!9.07e-15!50;UBERON:0002616!3.33e-14!49;UBERON:0002346!5.62e-14!71;UBERON:0003075!5.62e-14!71;UBERON:0007284!5.62e-14!71;UBERON:0000033!7.98e-12!63;UBERON:0003080!9.24e-10!40;UBERON:0002780!2.59e-09!39;UBERON:0001890!2.59e-09!39;UBERON:0006240!2.59e-09!39;UBERON:0000477!5.18e-09!154;UBERON:0003103!2.29e-08!43;UBERON:0002020!3.89e-08!34;UBERON:0003914!8.83e-08!47;UBERON:0003056!1.30e-07!49;UBERON:0000468!2.13e-07!333;UBERON:0003076!8.14e-07!12;UBERON:0003057!8.14e-07!12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004111,1.34e-25,122;UBERON:0000025,2.27e-25,114;UBERON:0001016,9.67e-23,75;UBERON:0001017,1.98e-22,73;UBERON:0010314,2.77e-19,92;UBERON:0004121,7.28e-18,95;UBERON:0000924,7.28e-18,95;UBERON:0006601,7.28e-18,95;UBERON:0000073,4.11e-16,54;UBERON:0001049,3.01e-15,52;UBERON:0005068,3.01e-15,52;UBERON:0006241,3.01e-15,52;UBERON:0007135,3.01e-15,52;UBERON:0000955,2.20e-13,47;UBERON:0006238,2.20e-13,47;UBERON:0002346,2.30e-13,64;UBERON:0003075,2.30e-13,64;UBERON:0007284,2.30e-13,64;UBERON:0002616,7.82e-13,46;UBERON:0010371,7.48e-12,73;UBERON:0003080,9.16e-10,40;UBERON:0002780,2.57e-09,39;UBERON:0001890,2.57e-09,39;UBERON:0006240,2.57e-09,39;UBERON:0003103,2.27e-08,43;UBERON:0002020,3.87e-08,34;UBERON:0003914,8.78e-08,47;UBERON:0003056,1.29e-07,49;UBERON:0003076,8.10e-07,12;UBERON:0003057,8.10e-07,12 | |||
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| ||
|short_description=p1@Creld1 | |||
}} | }} |
Latest revision as of 11:32, 26 September 2015
Short description: | p1@Creld1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Creld1_5end |
Coexpression cluster: | MCL_coexpression_mm9:3536 |
Association with transcript: | 0bp_to_NM_133930, uc009dgn.1, uc009dgo.1_5end |
EntrezGene: | Creld1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ectodermal cell | 1.95e-10 | 44 |
neurectodermal cell | 1.95e-10 | 44 |
neural cell | 2.57e-10 | 43 |
embryonic cell | 3.34e-08 | 70 |
electrically responsive cell | 7.38e-08 | 39 |
electrically active cell | 7.38e-08 | 39 |
oligodendrocyte precursor cell | 8.84e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
anatomical conduit | 1.34e-25 | 122 |
tube | 2.27e-25 | 114 |
nervous system | 9.67e-23 | 75 |
central nervous system | 1.98e-22 | 73 |
structure with developmental contribution from neural crest | 2.77e-19 | 92 |
ectoderm-derived structure | 7.28e-18 | 95 |
ectoderm | 7.28e-18 | 95 |
presumptive ectoderm | 7.28e-18 | 95 |
regional part of nervous system | 4.11e-16 | 54 |
neural tube | 3.01e-15 | 52 |
neural rod | 3.01e-15 | 52 |
future spinal cord | 3.01e-15 | 52 |
neural keel | 3.01e-15 | 52 |
brain | 2.20e-13 | 47 |
future brain | 2.20e-13 | 47 |
neurectoderm | 2.30e-13 | 64 |
neural plate | 2.30e-13 | 64 |
presumptive neural plate | 2.30e-13 | 64 |
regional part of brain | 7.82e-13 | 46 |
ecto-epithelium | 7.48e-12 | 73 |
anterior neural tube | 9.16e-10 | 40 |
regional part of forebrain | 2.57e-09 | 39 |
forebrain | 2.57e-09 | 39 |
future forebrain | 2.57e-09 | 39 |
compound organ | 2.27e-08 | 43 |
gray matter | 3.87e-08 | 34 |
epithelial tube | 8.78e-08 | 47 |
pre-chordal neural plate | 1.29e-07 | 49 |
posterior neural tube | 8.10e-07 | 12 |
chordal neural plate | 8.10e-07 | 12 |