FFCP PHASE1:Mm9::chr2:28048739..28048756,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(3 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=56177 | |EntrezGene=56177 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=2 | |MCL_coexpression_id=2 | ||
|TSSclassifier=NA | |||
|UniProt=G3X9Q7,Q8R357,O88998,A3KGE4 | |UniProt=G3X9Q7,Q8R357,O88998,A3KGE4 | ||
|association_with_transcript=126bp_to_ENSMUST00000100244,NM_001038613,NM_001038614,uc008iya.1,uc008iyb.1_5end | |association_with_transcript=126bp_to_ENSMUST00000100244,NM_001038613,NM_001038614,uc008iya.1,uc008iyb.1_5end | ||
|cluster_id=chr2:28048739..28048756,+ | |||
|description=CAGE_peak_3_at_Olfm1_5end | |description=CAGE_peak_3_at_Olfm1_5end | ||
|id=chr2:28048739..28048756,+ | |id=chr2:28048739..28048756,+ | ||
|ontology_enrichment_celltype=CL:0000221!2.32e-14!44;CL:0000133!2.32e-14!44;CL:0002319!2.74e-14!43;CL:0000117!1.84e-13!23;CL:0000337!1.84e-13!23;CL:0000540!5.98e-12!33;CL:0000047!5.98e-12!33;CL:0000031!5.98e-12!33;CL:0000404!5.98e-12!33;CL:0000055!6.83e-11!50;CL:0000393!9.51e-09!39;CL:0000211!9.51e-09!39 | |ontology_enrichment_celltype=CL:0000221!2.32e-14!44;CL:0000133!2.32e-14!44;CL:0002319!2.74e-14!43;CL:0000117!1.84e-13!23;CL:0000337!1.84e-13!23;CL:0000540!5.98e-12!33;CL:0000047!5.98e-12!33;CL:0000031!5.98e-12!33;CL:0000404!5.98e-12!33;CL:0000055!6.83e-11!50;CL:0000393!9.51e-09!39;CL:0000211!9.51e-09!39 | ||
|ontology_enrichment_celltype_v019_2=CL:0000221,2.48e-15,44;CL:0000133,2.48e-15,44;CL:0002319,3.03e-15,43;CL:0000117,5.90e-15,23;CL:0000337,5.90e-15,23;CL:0000540,1.33e-12,33;CL:0000047,1.33e-12,33;CL:0000031,1.33e-12,33;CL:0000404,1.33e-12,33;CL:0000393,5.04e-09,39;CL:0000211,5.04e-09,39 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!1.10e-32!102;UBERON:0000924!1.10e-32!102;UBERON:0006601!1.10e-32!102;UBERON:0001017!2.13e-31!73;UBERON:0005743!2.13e-31!73;UBERON:0000073!2.22e-31!75;UBERON:0001016!2.22e-31!75;UBERON:0002346!5.26e-27!71;UBERON:0003075!5.26e-27!71;UBERON:0007284!5.26e-27!71;UBERON:0000033!1.28e-26!63;UBERON:0001049!1.31e-26!52;UBERON:0005068!1.31e-26!52;UBERON:0006241!1.31e-26!52;UBERON:0007135!1.31e-26!52;UBERON:0000955!1.04e-25!50;UBERON:0006238!1.04e-25!50;UBERON:0002616!5.52e-25!49;UBERON:0003056!6.41e-23!49;UBERON:0002020!1.02e-20!34;UBERON:0003080!1.18e-20!40;UBERON:0002780!4.04e-20!39;UBERON:0001890!4.04e-20!39;UBERON:0006240!4.04e-20!39;UBERON:0002791!8.75e-18!29;UBERON:0003528!8.75e-18!29;UBERON:0001893!8.75e-18!29;UBERON:0000956!1.55e-13!21;UBERON:0001869!1.55e-13!21;UBERON:0000203!1.55e-13!21;UBERON:0007811!2.13e-12!86;UBERON:0002619!1.59e-11!17;UBERON:0000153!1.87e-11!94;UBERON:0002021!4.26e-08!10;UBERON:0000411!4.26e-08!10;UBERON:0001950!4.26e-08!10;UBERON:0000468!2.48e-07!333 | |ontology_enrichment_uberon=UBERON:0004121!1.10e-32!102;UBERON:0000924!1.10e-32!102;UBERON:0006601!1.10e-32!102;UBERON:0001017!2.13e-31!73;UBERON:0005743!2.13e-31!73;UBERON:0000073!2.22e-31!75;UBERON:0001016!2.22e-31!75;UBERON:0002346!5.26e-27!71;UBERON:0003075!5.26e-27!71;UBERON:0007284!5.26e-27!71;UBERON:0000033!1.28e-26!63;UBERON:0001049!1.31e-26!52;UBERON:0005068!1.31e-26!52;UBERON:0006241!1.31e-26!52;UBERON:0007135!1.31e-26!52;UBERON:0000955!1.04e-25!50;UBERON:0006238!1.04e-25!50;UBERON:0002616!5.52e-25!49;UBERON:0003056!6.41e-23!49;UBERON:0002020!1.02e-20!34;UBERON:0003080!1.18e-20!40;UBERON:0002780!4.04e-20!39;UBERON:0001890!4.04e-20!39;UBERON:0006240!4.04e-20!39;UBERON:0002791!8.75e-18!29;UBERON:0003528!8.75e-18!29;UBERON:0001893!8.75e-18!29;UBERON:0000956!1.55e-13!21;UBERON:0001869!1.55e-13!21;UBERON:0000203!1.55e-13!21;UBERON:0007811!2.13e-12!86;UBERON:0002619!1.59e-11!17;UBERON:0000153!1.87e-11!94;UBERON:0002021!4.26e-08!10;UBERON:0000411!4.26e-08!10;UBERON:0001950!4.26e-08!10;UBERON:0000468!2.48e-07!333 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0004121,4.49e-35,95;UBERON:0000924,4.49e-35,95;UBERON:0006601,4.49e-35,95;UBERON:0001017,6.69e-34,73;UBERON:0001016,6.78e-34,75;UBERON:0000073,5.12e-31,54;UBERON:0010371,4.73e-30,73;UBERON:0002346,6.41e-30,64;UBERON:0003075,6.41e-30,64;UBERON:0007284,6.41e-30,64;UBERON:0001049,2.89e-29,52;UBERON:0005068,2.89e-29,52;UBERON:0006241,2.89e-29,52;UBERON:0007135,2.89e-29,52;UBERON:0000955,4.61e-26,47;UBERON:0006238,4.61e-26,47;UBERON:0002616,2.89e-25,46;UBERON:0003056,3.90e-25,49;UBERON:0002020,3.98e-23,34;UBERON:0003080,1.44e-22,40;UBERON:0002780,5.75e-22,39;UBERON:0001890,5.75e-22,39;UBERON:0006240,5.75e-22,39;UBERON:0003528,8.00e-20,29;UBERON:0002791,8.00e-20,29;UBERON:0001893,8.00e-20,29;UBERON:0010314,2.96e-17,92;UBERON:0000956,4.88e-15,21;UBERON:0001869,4.88e-15,21;UBERON:0000203,4.88e-15,21;UBERON:0002619,8.96e-13,17;UBERON:0002021,6.42e-09,10;UBERON:0000411,6.42e-09,10;UBERON:0001950,6.42e-09,10;UBERON:0003076,4.04e-07,12;UBERON:0003057,4.04e-07,12 | |||
|phase1_expression=3.52327463630547,0,0,0,0,2.01455126294268,1.86890112476421,0,0,0,0,0,0,0,0.333109761815663,0,0,0.157731082679119,0,0,15.818051968099,0,0.261199789138935,0.159992422793407,0.22940928106717,0.57423196411502,0.430761996159075,0.430942465371778,0,0,0.443461021310609,0,0,0,0,0.332469290716985,0.204169356262369,0,0,0,0,0,0,1.25896817975577,0.709638518536602,0,6.25913075478431,4.57852828398938,18.0142669842267,19.2485600083541,3.21968769738334,2.87505128729943,0,0,0,0.257259436035947,0.573066879877513,0,39.249393406762,31.2104677770499,36.1283899998522,1.69422266034566,0.889294796111139,0.449949858640699,0,0,15.8788058574755,11.5265491596466,17.9383029293666,20.7909145030804,19.3498964443271,25.1372866275347,20.0990372265968,21.6808714610469,20.7026217399391,18.3843757322004,29.731287869835,44.4351936536453,41.7809770456982,40.0934314699789,49.586302832506,30.7338888628488,19.2636269310953,18.0084035210138,36.3659829708808,45.3728021629448,32.7454865837937,43.8038697689456,1.28734528666413,3.70300644523249,2.02905142091174,0.860423876981386,0,0,0,0,4.63466586434781,0,0,0,2.81686839553361,0,0,0,0,0,0,1.59857431606684,2.07150306917737,2.07818994690755,0.867426633830679,4.56698217468212,0.922461989024234,2.26083960828934,1.88141931417128,1.13099932196708,0.988779870937496,2.02439099687876,0,0.808834249737046,1.76673214768315,0.969750506270444,0,26.0574909340277,18.6407569063975,0.510914110417183,0,0,0,20.3715269590559,24.7050325522058,16.0837570704466,93.1698356230602,105.354768420096,29.7136903720171,47.536690078853,4.58277137326423,0.995255764880744,0,2.52530227063769,1.95180664444056,5.51765050640335,7.56260945182467,7.38453607395004,7.00775941258677,9.86475646193343,9.7449793542118,6.98499100995342,0.431135985865684,0.189106080167819,0.351902248327898,0.876782929710299,0.556094498451196,2.78601733217733,3.2925141825271,0,0,0,0,0,0,0,0,0,0.154267112887378,0.697601834251224,0.536546802799238,1.40118410840603,1.15191894939436,0.492502392237286,0.486412857275134,0.730999937126662,0.658650345873152,1.20785776884335,111.033092841859,30.1510514271303,1.32167513193519,0.528901133327089,0.639864751605702,0.928946687441754,1.03093969057675,2.42020229548011,1.33426826306922,0.951128130562796,0.474529061544512,2.9645811850322,1.00534083520108,2.18852119245266,0.974820435595601,0,0,0.199141273254367,0.948339504765408,1.14248512609729,1.1270773567308,1.22190796707189,0.193952487167626,0.841629838683823,0.252946148497029,0.295220295959204,0.31399745568275,0.123397163921801,0.592905254174298,0,0,0,0.202860121388503,0.241177159752417,0,0.287696137450811,0.162135226775035,0.823684239564244,2.87536413054709,0.372140947668503,0,0.252578877947112,0.358794827043824,0,0.923765950833023,0.189491411770485,0.488894929326078,0.169745085775188,0.469380496577004,1.17254380209271,1.90434912708811,0.780534591431195,1.10344600874334,0.664394068946325,0.637819074629948,0.491589944147214,1.55416483679306,1.01254341007058,0,0,1.47529281905711,1.65562047782839,13.1651483789989,13.7137673312878,0,0.504941854408746,0.94652465824877,0.390438744296638,1.72338718186239,1.19484398976276,1.33679204449436,2.54768877709949,2.83367491172426,4.09158201075837,5.13874111330481,99.930929407182,2.12910127812403,1.95872164033981,4.23506094319298,8.08353602565424,0,1.69946445308487,0.906970670894253,1.50884063804718,2.06711325016541,1.84461088766356,2.58428293168221,0.363533729477506,1.06949213515416,0.632073515871632,0,0,19.4050575279659,0.720244376125241,2.19909762430683,3.21505552547388,3.3694644392032,11.2372355089304,14.3157647923845,17.0500371504176,1.40803024838226,0.21183207086382,0.441056796109924,1.15420377059036,3.39075296061402,3.07595917133595,2.14870219205646,2.29797259643086,1.1659233465194,11.1255181206306,0.341741761595705,1.03193433981611,0.555583582109135,0.188368457004691,0.683471138605126,0.457556346413045,0,0.139951452323658,0.276399947608848,1.90934123603023,0.949007980743406,2.03319467126849,1.72808545314882,1.67270636811575,1.52853794622324,1.07891477107857,2.56225712748541,1.30877970992015,0.777689839750757,0,0,0.149516546043979,0.330916980914195,0.194451188344048,0.774958940866387,0.337912250981556,0.58678619322877,0.651021924219751,0.943734099831398,0,0.288030006257865,0,1.82452693761148,1.74608627180206,0.649604114888975,0.537080087002444,0.596044064343795,0.480781798079875,0,0.403865799792591,0.0762068066549998,0.302478555410522,0.194915761479505,0.192423683280659,0.467507608726276,0.680191150845634,0.221985953374065,0.269141569828427,0.167884616364078,2.70465431645067,270.450447125153,12.8206136987086,1.2862102744744,0.501572104035363,101.090579828455,92.0650473014354,97.9651327981368,108.439358058867,125.370101118028,119.352235787573,103.953465035698,117.984155244746,104.675896475351,112.871747961897,1.45302286617847,5.58634822761443,5.12200817262403,5.59145449257076,2.93458427679175,3.12533964365024,6.44515510624684,7.62329711783909,7.70206103020357,3.79045817645696,7.09742039692671,6.60192194851267,6.9294715527713,6.85069130732101,5.85841783347255,5.23923060411381,6.14186927507734,6.17309505483856,3.70877310722976,5.2991611248383,6.51451579532289,6.56660482789549,7.15308569841963,7.99405291477807,6.21121910741182,5.66917872874233,6.0366231048015,5.5244639401947,5.97538100921792,5.61142271657738,5.93175090620871,7.78185410766951,3.6830793885272,5.42278944150881,4.43685205256625,12.7403394748352,6.55008503647143,5.80151845930405,6.88637995447836,4.41182838239031,2.55054619182464 | |phase1_expression=3.52327463630547,0,0,0,0,2.01455126294268,1.86890112476421,0,0,0,0,0,0,0,0.333109761815663,0,0,0.157731082679119,0,0,15.818051968099,0,0.261199789138935,0.159992422793407,0.22940928106717,0.57423196411502,0.430761996159075,0.430942465371778,0,0,0.443461021310609,0,0,0,0,0.332469290716985,0.204169356262369,0,0,0,0,0,0,1.25896817975577,0.709638518536602,0,6.25913075478431,4.57852828398938,18.0142669842267,19.2485600083541,3.21968769738334,2.87505128729943,0,0,0,0.257259436035947,0.573066879877513,0,39.249393406762,31.2104677770499,36.1283899998522,1.69422266034566,0.889294796111139,0.449949858640699,0,0,15.8788058574755,11.5265491596466,17.9383029293666,20.7909145030804,19.3498964443271,25.1372866275347,20.0990372265968,21.6808714610469,20.7026217399391,18.3843757322004,29.731287869835,44.4351936536453,41.7809770456982,40.0934314699789,49.586302832506,30.7338888628488,19.2636269310953,18.0084035210138,36.3659829708808,45.3728021629448,32.7454865837937,43.8038697689456,1.28734528666413,3.70300644523249,2.02905142091174,0.860423876981386,0,0,0,0,4.63466586434781,0,0,0,2.81686839553361,0,0,0,0,0,0,1.59857431606684,2.07150306917737,2.07818994690755,0.867426633830679,4.56698217468212,0.922461989024234,2.26083960828934,1.88141931417128,1.13099932196708,0.988779870937496,2.02439099687876,0,0.808834249737046,1.76673214768315,0.969750506270444,0,26.0574909340277,18.6407569063975,0.510914110417183,0,0,0,20.3715269590559,24.7050325522058,16.0837570704466,93.1698356230602,105.354768420096,29.7136903720171,47.536690078853,4.58277137326423,0.995255764880744,0,2.52530227063769,1.95180664444056,5.51765050640335,7.56260945182467,7.38453607395004,7.00775941258677,9.86475646193343,9.7449793542118,6.98499100995342,0.431135985865684,0.189106080167819,0.351902248327898,0.876782929710299,0.556094498451196,2.78601733217733,3.2925141825271,0,0,0,0,0,0,0,0,0,0.154267112887378,0.697601834251224,0.536546802799238,1.40118410840603,1.15191894939436,0.492502392237286,0.486412857275134,0.730999937126662,0.658650345873152,1.20785776884335,111.033092841859,30.1510514271303,1.32167513193519,0.528901133327089,0.639864751605702,0.928946687441754,1.03093969057675,2.42020229548011,1.33426826306922,0.951128130562796,0.474529061544512,2.9645811850322,1.00534083520108,2.18852119245266,0.974820435595601,0,0,0.199141273254367,0.948339504765408,1.14248512609729,1.1270773567308,1.22190796707189,0.193952487167626,0.841629838683823,0.252946148497029,0.295220295959204,0.31399745568275,0.123397163921801,0.592905254174298,0,0,0,0.202860121388503,0.241177159752417,0,0.287696137450811,0.162135226775035,0.823684239564244,2.87536413054709,0.372140947668503,0,0.252578877947112,0.358794827043824,0,0.923765950833023,0.189491411770485,0.488894929326078,0.169745085775188,0.469380496577004,1.17254380209271,1.90434912708811,0.780534591431195,1.10344600874334,0.664394068946325,0.637819074629948,0.491589944147214,1.55416483679306,1.01254341007058,0,0,1.47529281905711,1.65562047782839,13.1651483789989,13.7137673312878,0,0.504941854408746,0.94652465824877,0.390438744296638,1.72338718186239,1.19484398976276,1.33679204449436,2.54768877709949,2.83367491172426,4.09158201075837,5.13874111330481,99.930929407182,2.12910127812403,1.95872164033981,4.23506094319298,8.08353602565424,0,1.69946445308487,0.906970670894253,1.50884063804718,2.06711325016541,1.84461088766356,2.58428293168221,0.363533729477506,1.06949213515416,0.632073515871632,0,0,19.4050575279659,0.720244376125241,2.19909762430683,3.21505552547388,3.3694644392032,11.2372355089304,14.3157647923845,17.0500371504176,1.40803024838226,0.21183207086382,0.441056796109924,1.15420377059036,3.39075296061402,3.07595917133595,2.14870219205646,2.29797259643086,1.1659233465194,11.1255181206306,0.341741761595705,1.03193433981611,0.555583582109135,0.188368457004691,0.683471138605126,0.457556346413045,0,0.139951452323658,0.276399947608848,1.90934123603023,0.949007980743406,2.03319467126849,1.72808545314882,1.67270636811575,1.52853794622324,1.07891477107857,2.56225712748541,1.30877970992015,0.777689839750757,0,0,0.149516546043979,0.330916980914195,0.194451188344048,0.774958940866387,0.337912250981556,0.58678619322877,0.651021924219751,0.943734099831398,0,0.288030006257865,0,1.82452693761148,1.74608627180206,0.649604114888975,0.537080087002444,0.596044064343795,0.480781798079875,0,0.403865799792591,0.0762068066549998,0.302478555410522,0.194915761479505,0.192423683280659,0.467507608726276,0.680191150845634,0.221985953374065,0.269141569828427,0.167884616364078,2.70465431645067,270.450447125153,12.8206136987086,1.2862102744744,0.501572104035363,101.090579828455,92.0650473014354,97.9651327981368,108.439358058867,125.370101118028,119.352235787573,103.953465035698,117.984155244746,104.675896475351,112.871747961897,1.45302286617847,5.58634822761443,5.12200817262403,5.59145449257076,2.93458427679175,3.12533964365024,6.44515510624684,7.62329711783909,7.70206103020357,3.79045817645696,7.09742039692671,6.60192194851267,6.9294715527713,6.85069130732101,5.85841783347255,5.23923060411381,6.14186927507734,6.17309505483856,3.70877310722976,5.2991611248383,6.51451579532289,6.56660482789549,7.15308569841963,7.99405291477807,6.21121910741182,5.66917872874233,6.0366231048015,5.5244639401947,5.97538100921792,5.61142271657738,5.93175090620871,7.78185410766951,3.6830793885272,5.42278944150881,4.43685205256625,12.7403394748352,6.55008503647143,5.80151845930405,6.88637995447836,4.41182838239031,2.55054619182464 | ||
|short_description=p3@Olfm1 | |short_description=p3@Olfm1 | ||
}} | }} |
Latest revision as of 11:52, 26 September 2015
Short description: | p3@Olfm1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Olfm1_5end |
Coexpression cluster: | MCL_coexpression_mm9:2 |
Association with transcript: | 126bp_to_ENSMUST00000100244, NM_001038613, NM_001038614, uc008iya.1, uc008iyb.1_5end |
EntrezGene: | Olfm1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ectodermal cell | 2.48e-15 | 44 |
neurectodermal cell | 2.48e-15 | 44 |
neural cell | 3.03e-15 | 43 |
CNS neuron (sensu Vertebrata) | 5.90e-15 | 23 |
neuroblast (sensu Vertebrata) | 5.90e-15 | 23 |
neuron | 1.33e-12 | 33 |
neuronal stem cell | 1.33e-12 | 33 |
neuroblast | 1.33e-12 | 33 |
electrically signaling cell | 1.33e-12 | 33 |
electrically responsive cell | 5.04e-09 | 39 |
electrically active cell | 5.04e-09 | 39 |