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FFCP PHASE1:Mm9::chr2:30219747..30219780,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=108958
|EntrezGene=108958
|HGNC=
|HGNC=
|MCL_coexpression_id=1
|TSSclassifier=NA
|UniProt=Q8BK03
|UniProt=Q8BK03
|association_with_transcript=0bp_to_ENSMUST00000077977,ENSMUST00000140075,ENSMUST00000146308,NM_001242407,uc008jcf.1,uc008jcg.1_5end
|association_with_transcript=0bp_to_ENSMUST00000077977,ENSMUST00000140075,ENSMUST00000146308,NM_001242407,uc008jcf.1,uc008jcg.1_5end
|cluster_id=chr2:30219747..30219780,+
|description=CAGE_peak_1_at_Fam73b_5end
|description=CAGE_peak_1_at_Fam73b_5end
|id=chr2:30219747..30219780,+
|id=chr2:30219747..30219780,+
|ontology_enrichment_celltype=CL:0000117!4.32e-07!23;CL:0000337!4.32e-07!23
|ontology_enrichment_celltype=CL:0000117!4.32e-07!23;CL:0000337!4.32e-07!23
|ontology_enrichment_celltype_v019_2=CL:0000117,4.32e-07,23;CL:0000337,4.32e-07,23
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001049!4.61e-18!52;UBERON:0005068!4.61e-18!52;UBERON:0006241!4.61e-18!52;UBERON:0007135!4.61e-18!52;UBERON:0000955!7.11e-18!50;UBERON:0006238!7.11e-18!50;UBERON:0002616!2.83e-17!49;UBERON:0001017!1.02e-16!73;UBERON:0005743!1.02e-16!73;UBERON:0000073!2.82e-16!75;UBERON:0001016!2.82e-16!75;UBERON:0000033!3.99e-14!63;UBERON:0002346!1.40e-13!71;UBERON:0003075!1.40e-13!71;UBERON:0007284!1.40e-13!71;UBERON:0002020!2.66e-12!34;UBERON:0003080!2.77e-12!40;UBERON:0002780!1.08e-11!39;UBERON:0001890!1.08e-11!39;UBERON:0006240!1.08e-11!39;UBERON:0004121!1.61e-11!102;UBERON:0000924!1.61e-11!102;UBERON:0006601!1.61e-11!102;UBERON:0000025!7.03e-11!114;UBERON:0002791!2.95e-10!29;UBERON:0003528!2.95e-10!29;UBERON:0001893!2.95e-10!29;UBERON:0003056!4.11e-10!49;UBERON:0004111!5.14e-10!122;UBERON:0000956!1.32e-07!21;UBERON:0001869!1.32e-07!21;UBERON:0000203!1.32e-07!21;UBERON:0003076!8.47e-07!12;UBERON:0003057!8.47e-07!12
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.58e-19,54;UBERON:0001049,4.61e-18,52;UBERON:0005068,4.61e-18,52;UBERON:0006241,4.61e-18,52;UBERON:0007135,4.61e-18,52;UBERON:0001017,1.02e-16,73;UBERON:0001016,2.82e-16,75;UBERON:0000955,7.25e-16,47;UBERON:0006238,7.25e-16,47;UBERON:0002616,2.77e-15,46;UBERON:0010314,1.15e-14,92;UBERON:0002346,1.28e-13,64;UBERON:0003075,1.28e-13,64;UBERON:0007284,1.28e-13,64;UBERON:0002020,2.66e-12,34;UBERON:0003080,2.77e-12,40;UBERON:0002780,1.08e-11,39;UBERON:0001890,1.08e-11,39;UBERON:0006240,1.08e-11,39;UBERON:0010371,1.57e-11,73;UBERON:0004121,3.09e-11,95;UBERON:0000924,3.09e-11,95;UBERON:0006601,3.09e-11,95;UBERON:0000025,7.03e-11,114;UBERON:0003528,2.95e-10,29;UBERON:0002791,2.95e-10,29;UBERON:0001893,2.95e-10,29;UBERON:0003056,4.11e-10,49;UBERON:0004111,5.14e-10,122;UBERON:0000956,1.32e-07,21;UBERON:0001869,1.32e-07,21;UBERON:0000203,1.32e-07,21;UBERON:0003076,8.47e-07,12;UBERON:0003057,8.47e-07,12
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|phase1_expression=9.76907967339243,14.3079917132138,9.55498402718026,18.7527811010235,26.0465779572101,5.37213670118047,3.50418960893289,4.9066862907799,0.563154888606667,1.17032263160997,8.38968044304974,10.2906085103984,5.13602189793617,6.11942816932982,5.66286595086627,6.2767332890846,5.59649502502517,8.51747846467242,6.30726394586398,5.51706547337439,10.2051948181284,4.46809280403984,3.6567970479451,8.79958325363737,7.11168771308227,4.01962374880514,11.1998119001359,7.32602191132023,8.36103045608045,6.80481350351813,7.09537634096975,20.3209815507082,23.3724619282137,15.8481681015439,6.35473563452804,6.15068187826422,3.47087905646027,1.25559489221072,1.5626706890476,1.0470474879476,0,0.683045484958446,0.971020706062307,6.92432498865675,7.80602370390262,5.68994931701213,17.2126095756569,8.93903141159831,11.643367684927,14.387812531497,7.55926676776958,12.9377307928474,2.51673909086605,4.35217285206807,3.36093799142464,4.11615097657515,5.44413535883638,8.25075347643908,11.9366711907163,9.52183762689659,15.8457850876545,9.4876468979357,11.5608323494448,8.09909745553259,13.8441290759376,6.3943210345149,16.1784059679939,19.9793518767208,10.7837196800817,11.2054928815303,9.88527318351495,15.1395021734016,20.0990372265968,6.61450315760752,7.57179221044067,8.27296907949019,30.8324466798288,22.6006588410782,21.6585211891303,10.8146755938759,10.5210790142771,9.37644067002168,26.2432019061298,15.1945904708554,20.1693687065389,12.374400589894,13.810053037513,11.9295645328192,9.16286939331527,6.12129636864963,4.34796733052517,7.74381489283248,2.719885334831,10.2543606411185,16.8941868536394,15.2329141613094,9.55022056895913,6.64678258054425,5.45550609666024,4.94675404314476,9.57735254481427,6.41632387071589,12.7402619853323,0,5.19578498426914,5.32055717497707,4.54972000513305,9.47726201668198,4.40194402200192,9.79718117827843,8.32729568477452,10.9607572192371,9.22461989024234,7.53613202763113,6.23220147819235,11.6869929936598,3.70792451601561,17.2073234734695,2.65383165584962,6.47067399789637,3.09178125844551,9.21262980956922,9.31958806090611,22.5441213698891,30.369772487951,8.43008282188352,2.39630249011841,1.19980546198682,1.90605340609597,20.8208988772704,17.3850229071078,10.8062742817063,16.339486098074,19.1786592997748,27.2202338373024,23.0382593556216,5.19380755636613,5.84712761867437,6.31806896084187,13.8891624885073,6.76626303406059,7.35686734187113,4.14142898552303,8.43946979880004,7.8241974024027,6.02134485338794,7.12133106653939,10.3481348295606,5.38919982332106,8.50977360755187,8.79755620819744,7.89104636739269,7.50727572909114,11.4923214952315,6.99659263787008,7.96137067273973,0.702213187313235,2.31613116403244,2.84163499395593,7.24940203874257,7.97388603935727,7.38254451990161,8.75955521665278,11.6090896730968,9.87309522479221,7.44108623201305,13.1453966685813,9.5747580741079,13.000228143165,12.6408947340903,12.4845966700618,16.5205985790626,15.1489579550825,11.2733391758712,19.9775451135921,12.7601719350313,15.5296828002385,16.9248362664668,7.67837701926842,10.6828869055802,8.24751752461397,6.25218926332362,6.67134131534611,5.70676878337677,12.8122846617018,6.0938613247884,8.54539709920916,5.57078121715222,7.01870713628832,8.08937467788799,9.07779809473716,10.1562049359727,6.06937283049861,7.76889885746156,10.1436962105772,9.16430975303914,7.17624202520215,5.82127305089644,8.28398636327771,12.251642282307,13.1878931386755,11.105744752962,10.9687472022245,5.17219827719892,5.89676985339609,5.17182858485164,5.47722327748958,4.10001171579109,5.0925170356284,4.60313819921297,6.64754429777645,6.86403532970204,12.9391385874619,8.93138274404408,9.36113019343682,10.6083128737787,13.4548060141434,14.473305640901,6.65111484599777,7.20067364727842,6.19266910479698,6.62005834523234,6.10194645550105,5.86271901046355,7.14130922658041,7.21994497073856,5.51723004371669,8.41565820665345,9.24837658213425,8.52089236521838,8.46156411142888,8.53429445630918,4.52373851817817,2.17562273527484,5.4094070032094,3.03530420935206,20.5504755184374,22.0357970793342,4.75411341592359,8.07906967053994,5.67914794949262,1.95219372148319,6.46270193198397,6.69112634267146,7.79795359288379,3.39691836946599,4.85772842009873,5.55286130031493,4.74345333535828,19.2792789853084,8.37446502728785,8.369083372361,6.8412522928502,8.08353602565424,10.619611067197,7.76898035695941,8.46505959501303,6.03536255218874,4.42952839321159,4.30409207121498,8.26970538138308,7.99774204850512,4.9909632973861,6.0046984007805,5.27093042874994,7.21948802737308,11.234506989875,6.48219938512717,8.5376731296618,10.2881776815164,7.98031051390231,10.7021290561242,9.87294123612726,15.5277124048446,5.39744928546534,4.2366414172764,5.51320995137405,6.5954501176592,6.62004149453213,7.96130609051657,8.35606408021955,8.20704498725306,12.8251568117134,18.7279555030615,5.29699730473343,8.46186158649212,5.18544676635193,7.72310673719233,8.33834789098253,8.00723606222829,3.0596117398894,2.93898049879682,1.65839968565309,11.4560474161814,9.17374381385292,7.72613975082025,7.77638453916969,8.57262013659322,9.17122767733946,9.84509728609191,6.94289028092822,12.3025292732494,5.96228877142247,3.72803587852155,0,8.52244312450679,9.43113395605456,10.3059129822345,9.42866711387437,8.61676240002969,6.80671984145373,8.46328501485676,10.171356409294,5.07326653734613,3.74439008135225,4.74016680942267,7.9062833963164,6.7789231728786,5.3267537420896,4.65469408735452,5.36439657909415,4.32703618271888,4.87375439676105,4.84638959751109,5.10585604588499,4.03304740547362,3.80085734885034,6.83104075646339,4.9088298916259,6.12172035761071,5.54964883435162,3.58855426437903,2.85403847818933,10.8186172658027,4.69206188627955,6.04400360081975,5.35920947697665,8.52672576860118,15.8130515932779,19.7939851698086,17.1868654031819,17.1853182343688,15.0718154349541,17.3740596399631,20.925697507186,18.463169332193,16.7662691324156,19.6748918465692,5.08558003162466,4.78829848081237,8.36594668195257,8.265628380322,3.98265008993166,6.43452279575049,10.2233494788743,9.88968274746692,12.194929964489,8.84440241173291,8.87177549615839,9.80856975207596,10.1132828067473,11.0123262136375,11.5445292600783,11.9073422820768,10.429589335037,12.9249177710682,7.00546031365621,10.5983222496766,8.22886205724997,8.69631450180754,7.86839426826159,10.4649419975277,12.0460006931623,12.2691181442931,9.51225458938417,9.99664903463803,11.0001332215148,8.41713407486608,9.84670650430645,11.3280154731898,11.0492381655816,10.2258315182738,7.13754460630223,12.7403394748352,8.88940112092552,5.15690529715916,6.31251495827183,7.72069966918304,9.27471342481686
|short_description=p1@Fam73b
|short_description=p1@Fam73b
}}
}}

Latest revision as of 13:02, 26 September 2015

Short description:p1@Fam73b
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Fam73b_5end
Coexpression cluster:MCL_coexpression_mm9:1
Association with transcript: 0bp_to_ENSMUST00000077977, ENSMUST00000140075, ENSMUST00000146308, NM_001242407, uc008jcf.1, uc008jcg.1_5end
EntrezGene:Fam73b
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Fam73b

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G79.77
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I514.31
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I69.55
CD326+ enterocyte, pool1.CNhs13542.11848-124I318.75
CD326+ enterocyte, pool2.CNhs13197.11849-124I426.05
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I75.37
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I83.50
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E94.91
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.56
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F21.17
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E68.39
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F110.29
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E45.14
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E86.12
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A15.66
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A36.28
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A55.60
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A28.52
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A46.31
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A65.52
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A310.21
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H24.47
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I93.66
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D18.80
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D27.11
GP2+ M cell, pool1.CNhs13228.11845-124H94.02
GP2+ M cell, pool2.CNhs13231.11846-124I111.20
GP2+ M cell, pool3.CNhs13240.11847-124I27.33
Ileum epithelium, pool1.CNhs13199.10252-104B98.36
Ileum epithelium, pool2.CNhs13232.10253-104C16.80
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C87.10
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I320.32
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G623.37
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E915.85
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F56.35
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F66.15
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F73.47
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G81.26
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H11.56
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H31.05
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.68
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.97
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D86.92
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D97.81
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B35.69
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B717.21
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C28.94
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B811.64
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C314.39
Mouse Astrocytes, donor2.CNhs12078.11552-120C47.56
Mouse Astrocytes, donor3.CNhs12107.11633-122C412.94
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A22.52
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I94.35
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A13.36
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C14.12
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E15.44
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C58.25
Mouse Granule cells, donor1.CNhs12131.11713-123C311.94
Mouse Granule cells, donor2.CNhs12357.11731-123E39.52
Mouse Granule cells, donor3.CNhs12108.11636-122C715.85
Mouse Meningeal cells, donor1.CNhs12132.11716-123C69.49
Mouse Meningeal cells, donor3.CNhs12109.11639-122D111.56
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C78.10
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E713.84
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D26.39
Mouse Microglia, donor1.CNhs12629.11718-123C816.18
Mouse Microglia, donor2.CNhs12634.11736-123E819.98
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D510.78
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F511.21
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D99.89
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F115.14
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D520.10
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D26.61
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F27.57
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D68.27
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D330.83
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F322.60
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D721.66
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D410.81
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F410.52
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D89.38
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E426.24
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E515.19
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I620.17
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D612.37
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F613.81
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E111.93
Mouse Schwann, donor1.CNhs12507.11728-123D99.16
Mouse Schwann, donor2.CNhs12573.11746-123F96.12
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G34.35
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F77.74
Mouse hepatocyte, donor1.CNhs13078.11714-123C42.72
Mouse hepatocyte, donor3.CNhs12615.11637-122C810.25
Mouse hepatocyte, donor6.CNhs13090.11822-124F416.89
Mouse hepatocyte, donor8.CNhs13091.11824-124F615.23
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A79.55
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I76.65
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E35.46
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I84.95
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G69.58
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H16.42
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I812.74
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G15.20
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G25.32
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G34.55
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B69.48
accessory axillary lymph node, adult.CNhs10475.1063-29H94.40
adrenal gland, adult.CNhs10508.49-24D79.80
adrenal gland, embryo E14.CNhs11038.406-44C58.33
adrenal gland, embryo E16.CNhs11004.1254-43D610.96
adrenal gland, embryo E17.CNhs11043.1263-45I19.22
adrenal gland, embryo E18.CNhs11026.1262-18F57.54
adrenal gland, neonate N00.CNhs11191.1311-23C16.23
adrenal gland, neonate N25.CNhs11223.1377-27I311.69
amnion, adult pregnant day17.5.CNhs10488.583-22A83.71
aorta, adult.CNhs10498.46-23H117.21
bone (os femoris), adult.CNhs10483.56-12G22.65
bone (os femoris), neonate N02.CNhs11227.1985-43F56.47
bone (os femoris), neonate N16.CNhs11225.1525-43A63.09
bone (os femoris), neonate N20.CNhs11195.1350-25C39.21
cecum, adult.CNhs10467.37-13H49.32
cerebellum, adult.CNhs10494.15-8B222.54
cerebellum, neonate N30.CNhs11135.1395-42I230.37
colon, adult.CNhs10468.36-18H78.43
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C72.40
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D11.20
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D41.91
corpora quadrigemina, adult.CNhs10501.16-22A420.82
corpus striatum, adult.CNhs10487.19-21D817.39
corpus striatum, neonate N00.CNhs11226.630-43F110.81
cortex, adult.CNhs10473.12-14D516.34
cortex, neonate N30.CNhs11107.1392-42F219.18
diencephalon, adult.CNhs10482.20-12F227.22
diencephalon, neonate N30.CNhs11201.1388-42B223.04
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B15.19
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A25.85
epididymis, adult.CNhs10490.58-23B26.32
eyeball, adult.CNhs10484.31-12G413.89
eyeball, embryo E12.CNhs11016.345-16C66.77
eyeball, embryo E14.CNhs10521.399-16E27.36
eyeball, embryo E15.CNhs10593.426-16C94.14
eyeball, embryo E17.CNhs11023.1261-18D48.44
eyeball, neonate N00.CNhs11207.633-15C67.82
eyeball, neonate N01.CNhs11140.1532-43E76.02
eyeball, neonate N02.CNhs11205.1551-44G87.12
eyeball, neonate N16.CNhs11188.777-19A210.35
forelimb, embryo E11.CNhs10596.335-25E25.39
forelimb, embryo E12.CNhs10600.359-14H28.51
forelimb, embryo E13.CNhs10589.384-1E28.80
forelimb, embryo E14.CNhs10577.413-26A87.89
forelimb, embryo E15.CNhs11007.437-20E77.51
forelimb, embryo E17.CNhs10598.1517-43C411.49
forelimb, embryo E18.CNhs11008.1520-43B57.00
gonad, embryo E13.CNhs11044.1564-45I67.96
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.70
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D22.32
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D52.84
heart, embryo E11.CNhs10586.331-24E97.25
heart, embryo E12.CNhs11015.353-12F57.97
heart, embryo E13.CNhs11013.376-3I97.38
heart, embryo E14.CNhs10597.403-26D48.76
heart, embryo E15.CNhs11017.431-16C811.61
heart, embryo E16.CNhs11021.457-17C69.87
heart, embryo E17.CNhs11025.479-18E57.44
heart, embryo E18.CNhs11030.1283-20G313.15
heart, neonate N00.CNhs11213.639-21E39.57
heart, neonate N03.CNhs11221.1349-25I213.00
heart, neonate N10.CNhs11118.749-24G112.64
heart, neonate N16.CNhs11209.782-15G112.48
heart, neonate N20.CNhs11127.821-26I616.52
heart, neonate N25.CNhs11196.1351-25D315.15
heart, neonate N30.CNhs11202.1390-42D211.27
hippocampus, adult.CNhs10478.13-16E819.98
hippocampus, neonate N00.CNhs11228.627-43G112.76
intestinal mucosa, adult.CNhs10506.860-29I315.53
intestine, adult.CNhs10496.178-9A316.92
intestine, embryo E12.CNhs11019.1251-16I57.68
intestine, embryo E13.CNhs11010.381-16D510.68
intestine, embryo E15.CNhs10602.976-16D88.25
intestine, embryo E16.CNhs10585.463-22H46.25
intestine, embryo E17.CNhs10582.482-18D36.67
intestine, embryo E18.CNhs10526.1289-20F75.71
intestine, neonate N00.CNhs11126.644-26D112.81
intestine, neonate N01.CNhs11192.1322-23E96.09
intestine, neonate N06.CNhs11102.688-20B88.55
intestine, neonate N07.CNhs11095.720-20F25.57
intestine, neonate N10.CNhs11098.755-23A57.02
intestine, neonate N20.CNhs11187.827-18D18.09
intestine, neonate N25.CNhs11121.1352-25E39.08
intestine, neonate N30.CNhs11131.1384-42G110.16
kidney, embryo E14.CNhs10606.411-4I96.07
kidney, embryo E15.CNhs10997.434-16F87.77
kidney, embryo E16.CNhs10584.464-22A510.14
kidney, embryo E17.CNhs11028.483-18I29.16
kidney, embryo E18.CNhs11001.1288-20C77.18
kidney, neonate N00.CNhs11214.646-21G75.82
kidney, neonate N10.CNhs11206.758-6D58.28
kidney, neonate N20.CNhs11113.832-19I112.25
kidney, neonate N25.CNhs11122.1353-25F313.19
kidney, neonate N30.CNhs11203.1385-42H111.11
liver, adult pregnant day01.CNhs10466.508-5B210.97
liver, embryo E12.CNhs10601.355-15F85.17
liver, embryo E13.CNhs10524.378-3H65.90
liver, embryo E14.CNhs10594.409-16E15.17
liver, embryo E15.CNhs10520.433-16D75.48
liver, embryo E16.CNhs10523.462-17F54.10
liver, embryo E17.CNhs10510.481-18A35.09
liver, embryo E18.CNhs10579.499-43G44.60
liver, neonate N00.CNhs11117.641-24F46.65
liver, neonate N03.CNhs11123.1345-25G26.86
liver, neonate N06.CNhs11101.684-20A812.94
liver, neonate N07.CNhs11103.716-20H28.93
liver, neonate N10.CNhs11115.751-24B99.36
liver, neonate N20.CNhs11220.823-25A310.61
liver, neonate N25.CNhs11198.1368-26H113.45
liver, neonate N30.CNhs11106.1382-42D114.47
lung, adult.CNhs10474.28-22B16.65
lung, embryo E12.CNhs10522.354-16G27.20
lung, embryo E14.CNhs10604.404-26F86.19
lung, embryo E15.CNhs11020.432-17C56.62
lung, embryo E16.CNhs10998.458-17B66.10
lung, embryo E17.CNhs10605.480-44A65.86
lung, embryo E18.CNhs10583.1287-20I67.14
lung, neonate N00.CNhs11224.640-42C67.22
lung, neonate N06.CNhs11212.683-20E55.52
lung, neonate N07.CNhs11111.715-19A38.42
lung, neonate N10.CNhs11219.750-23E69.25
lung, neonate N20.CNhs11109.822-18A48.52
lung, neonate N25.CNhs11119.1359-25C78.46
lung, neonate N30.CNhs11133.1394-42H28.53
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A14.52
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A12.18
mammary gland, adult lactating day02.CNhs10480.595-22B65.41
mammary gland, adult pregnant day19.CNhs10476.588-5H23.04
medulla oblongata, adult.CNhs10477.17-12C220.55
medulla oblongata, neonate N30.CNhs11200.1396-42A322.04
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C74.75
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C28.08
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E15.68
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E21.95
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E36.46
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D76.69
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D87.80
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D93.40
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D44.86
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D55.55
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D64.74
olfactory brain, adult.CNhs10489.18-22I919.28
ovary, adult.CNhs10507.91-2I78.37
ovary, embryo E18.CNhs11040.505-44H78.37
ovary, neonate N00.CNhs11217.1299-22I46.84
oviduct, adult pregnant day01.CNhs10500.988-6G68.08
pancreas, adult.CNhs10486.34-16E410.62
pancreas, embryo E14.CNhs11012.405-44F47.77
pancreas, embryo E15.CNhs11042.1556-45F28.47
pancreas, embryo E16.CNhs11003.460-26E56.04
pancreas, embryo E17.CNhs10599.1558-45G34.43
pancreas, embryo E18.CNhs10580.1535-43I74.30
pancreas, neonate N00.CNhs11105.645-26G98.27
pancreas, neonate N01.CNhs11138.1531-43D78.00
pancreas, neonate N02.CNhs11139.1539-43D84.99
pancreas, neonate N16.CNhs11136.787-43B66.00
pancreas, neonate N25.CNhs11094.1555-45E25.27
pancreas, neonate N30.CNhs11182.1548-44H57.22
pituitary gland, adult.CNhs10493.21-1G811.23
pituitary gland, embryo E12.CNhs11018.346-16E66.48
pituitary gland, embryo E13.CNhs11009.370-44C78.54
pituitary gland, embryo E14.CNhs11037.398-44A510.29
pituitary gland, embryo E15.CNhs10592.427-16B97.98
pituitary gland, embryo E16.CNhs11036.449-43F610.70
pituitary gland, embryo E17.CNhs11039.1265-44F59.87
pituitary gland, neonate N00.CNhs11190.1308-22E915.53
placenta, adult pregnant day10.CNhs10472.539-13I75.40
placenta, adult pregnant day17.CNhs10464.577-18G34.24
prostate, adult.CNhs10470.859-1F85.51
skin, adult.CNhs10492.30-1C36.60
skin, neonate N00.CNhs11124.650-25G46.62
skin, neonate N03.CNhs11215.662-22H37.96
skin, neonate N06.CNhs11097.693-20I58.36
skin, neonate N10.CNhs11108.762-6C48.21
small intestine, neonate N16.CNhs11114.790-21I112.83
spinal cord, adult.CNhs10505.24-13C918.73
spleen, adult.CNhs10465.25-2G25.30
spleen, embryo E16.CNhs11035.461-43C18.46
spleen, embryo E18.CNhs11011.1271-21F25.19
spleen, neonate N10.CNhs11116.752-24D17.72
spleen, neonate N20.CNhs11112.824-19H18.34
spleen, neonate N25.CNhs11099.1354-25G38.01
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C63.06
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C92.94
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D31.66
stomach, adult.CNhs10503.33-1H611.46
stomach, embryo E12.CNhs10588.356-43E39.17
stomach, embryo E15.CNhs10603.1252-16G87.73
stomach, embryo E16.CNhs11022.459-17D47.78
stomach, embryo E17.CNhs11006.1035-18D58.57
stomach, embryo E18.CNhs10999.1286-20C69.17
stomach, neonate N03.CNhs11193.1340-24B89.85
stomach, neonate N07.CNhs11210.718-18A96.94
stomach, neonate N25.CNhs11104.1355-25E412.30
stomach, neonate N30.CNhs11134.1386-42I15.96
submandibular gland, adult.CNhs10469.59-29C13.73
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F58.52
testis, embryo E15.CNhs11034.443-27C59.43
testis, embryo E16.CNhs11033.470-26G510.31
testis, embryo E17.CNhs11029.486-18I59.43
testis, embryo E18.CNhs11027.503-18G58.62
testis, neonate N00.CNhs11189.1300-22B76.81
testis, neonate N07.CNhs11222.726-26I48.46
testis, neonate N10.CNhs11204.763-44D910.17
testis, neonate N20.CNhs11110.839-18H35.07
testis, neonate N30.CNhs11130.1391-42E23.74
thymus, adult.CNhs10471.38-12B54.74
thymus, embryo E14.CNhs11041.402-44I47.91
thymus, embryo E15.CNhs11005.430-45I26.78
thymus, embryo E16.CNhs11002.456-26C55.33
thymus, embryo E17.CNhs10581.478-18C14.65
thymus, embryo E18.CNhs10595.1273-19G45.36
thymus, neonate N02.CNhs11181.1541-43F84.33
thymus, neonate N03.CNhs11137.2104-43C74.87
thymus, neonate N06.CNhs11197.681-26C44.85
thymus, neonate N07.CNhs11211.713-19D35.11
thymus, neonate N10.CNhs11194.748-24E44.03
thymus, neonate N20.CNhs11186.820-7A23.80
thymus, neonate N25.CNhs11125.1362-25G76.83
thymus, neonate N30.CNhs11132.1393-42G24.91
tongue, adult.CNhs10499.32-1B46.12
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H35.55
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F73.59
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G52.85
urinary bladder, adult.CNhs10481.879-12E410.82
uterus, adult pregnant day19.CNhs10497.590-15F54.69
uterus, adult.CNhs10509.92-27E56.04
vagina, adult.CNhs10502.89-27D55.36
vesicular gland, adult.CNhs10491.51-27F88.53
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A115.81
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A219.79
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A317.19
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D717.19
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A415.07
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A517.37
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A620.93
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A718.46
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A816.77
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A919.67
whole body, embryo E11.CNhs11014.324-5I85.09
whole body, embryo E12.CNhs10587.857-27C94.79
whole body, embryo E13.CNhs10512.372-23H28.37
whole body, embryo E14.5.CNhs10578.420-27D28.27
whole body, embryo E14.CNhs10519.395-14B13.98
whole body, embryo E16.CNhs10514.453-14F26.43
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G510.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G59.89
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G512.19
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G58.84
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G58.87
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G59.81
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G510.11
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G511.01
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G511.54
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G511.91
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G510.43
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G512.92
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G57.01
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G510.60
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G58.23
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G58.70
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G57.87
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G510.46
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G512.05
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G512.27
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G59.51
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G510.00
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G511.00
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G58.42
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G59.85
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G511.33
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G511.05
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G510.23
whole body, embryo E17.5.CNhs10513.490-9F97.14
whole body, embryo E17.CNhs10517.475-3I512.74
whole body, embryo E18.CNhs10516.493-3B38.89
whole body, neonate N00.CNhs10525.657-19C25.16
whole body, neonate N01.CNhs10576.659-23C66.31
whole body, neonate N06.CNhs10515.692-21D17.72
whole body, neonate N10.CNhs10518.761-6B49.27





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)4.32e-0723
neuroblast (sensu Vertebrata)4.32e-0723

Uber anatomy
Ontology termp-valuen
regional part of nervous system1.58e-1954
neural tube4.61e-1852
neural rod4.61e-1852
future spinal cord4.61e-1852
neural keel4.61e-1852
central nervous system1.02e-1673
nervous system2.82e-1675
brain7.25e-1647
future brain7.25e-1647
regional part of brain2.77e-1546
structure with developmental contribution from neural crest1.15e-1492
neurectoderm1.28e-1364
neural plate1.28e-1364
presumptive neural plate1.28e-1364
gray matter2.66e-1234
anterior neural tube2.77e-1240
regional part of forebrain1.08e-1139
forebrain1.08e-1139
future forebrain1.08e-1139
ecto-epithelium1.57e-1173
ectoderm-derived structure3.09e-1195
ectoderm3.09e-1195
presumptive ectoderm3.09e-1195
tube7.03e-11114
brain grey matter2.95e-1029
regional part of telencephalon2.95e-1029
telencephalon2.95e-1029
pre-chordal neural plate4.11e-1049
anatomical conduit5.14e-10122
cerebral cortex1.32e-0721
cerebral hemisphere1.32e-0721
pallium1.32e-0721
posterior neural tube8.47e-0712
chordal neural plate8.47e-0712
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