FFCP PHASE1:Mm9::chr2:30837870..30837896,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=74270 | |EntrezGene=74270 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1 | |MCL_coexpression_id=1 | ||
|TSSclassifier=NA | |||
|UniProt=Q8C9A6,Q8VCJ2 | |UniProt=Q8C9A6,Q8VCJ2 | ||
|association_with_transcript=0bp_to_ENSMUST00000061544,ENSMUST00000165772_5end | |association_with_transcript=0bp_to_ENSMUST00000061544,ENSMUST00000165772_5end | ||
|cluster_id=chr2:30837870..30837896,+ | |||
|description=CAGE_peak_1_at_Usp20_5end | |description=CAGE_peak_1_at_Usp20_5end | ||
|id=chr2:30837870..30837896,+ | |id=chr2:30837870..30837896,+ | ||
|ontology_enrichment_celltype=CL:0000221!1.60e-13!44;CL:0000133!1.60e-13!44;CL:0002319!3.14e-13!43;CL:0000540!2.54e-12!33;CL:0000047!2.54e-12!33;CL:0000031!2.54e-12!33;CL:0000404!2.54e-12!33;CL:0000117!2.07e-11!23;CL:0000337!2.07e-11!23;CL:0000055!5.41e-09!50;CL:0000393!1.65e-08!39;CL:0000211!1.65e-08!39 | |ontology_enrichment_celltype=CL:0000221!1.60e-13!44;CL:0000133!1.60e-13!44;CL:0002319!3.14e-13!43;CL:0000540!2.54e-12!33;CL:0000047!2.54e-12!33;CL:0000031!2.54e-12!33;CL:0000404!2.54e-12!33;CL:0000117!2.07e-11!23;CL:0000337!2.07e-11!23;CL:0000055!5.41e-09!50;CL:0000393!1.65e-08!39;CL:0000211!1.65e-08!39 | ||
|ontology_enrichment_celltype_v019_2=CL:0000221,1.60e-13,44;CL:0000133,1.60e-13,44;CL:0002319,3.14e-13,43;CL:0000540,2.54e-12,33;CL:0000047,2.54e-12,33;CL:0000031,2.54e-12,33;CL:0000404,2.54e-12,33;CL:0000117,2.07e-11,23;CL:0000337,2.07e-11,23;CL:0000393,1.65e-08,39;CL:0000211,1.65e-08,39 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!2.93e-32!73;UBERON:0005743!2.93e-32!73;UBERON:0004121!2.35e-31!102;UBERON:0000924!2.35e-31!102;UBERON:0006601!2.35e-31!102;UBERON:0000073!7.32e-30!75;UBERON:0001016!7.32e-30!75;UBERON:0001049!9.80e-25!52;UBERON:0005068!9.80e-25!52;UBERON:0006241!9.80e-25!52;UBERON:0007135!9.80e-25!52;UBERON:0000033!6.29e-24!63;UBERON:0002346!9.71e-24!71;UBERON:0003075!9.71e-24!71;UBERON:0007284!9.71e-24!71;UBERON:0000955!1.09e-23!50;UBERON:0006238!1.09e-23!50;UBERON:0002616!3.84e-23!49;UBERON:0003056!1.42e-18!49;UBERON:0003080!3.33e-18!40;UBERON:0002780!1.18e-17!39;UBERON:0001890!1.18e-17!39;UBERON:0006240!1.18e-17!39;UBERON:0002020!2.25e-17!34;UBERON:0002791!1.55e-14!29;UBERON:0003528!1.55e-14!29;UBERON:0001893!1.55e-14!29;UBERON:0007811!1.57e-12!86;UBERON:0000153!1.69e-12!94;UBERON:0000956!6.13e-10!21;UBERON:0001869!6.13e-10!21;UBERON:0000203!6.13e-10!21;UBERON:0002619!2.06e-09!17;UBERON:0003076!4.05e-07!12;UBERON:0003057!4.05e-07!12;UBERON:0002021!5.17e-07!10;UBERON:0000411!5.17e-07!10;UBERON:0001950!5.17e-07!10 | |ontology_enrichment_uberon=UBERON:0001017!2.93e-32!73;UBERON:0005743!2.93e-32!73;UBERON:0004121!2.35e-31!102;UBERON:0000924!2.35e-31!102;UBERON:0006601!2.35e-31!102;UBERON:0000073!7.32e-30!75;UBERON:0001016!7.32e-30!75;UBERON:0001049!9.80e-25!52;UBERON:0005068!9.80e-25!52;UBERON:0006241!9.80e-25!52;UBERON:0007135!9.80e-25!52;UBERON:0000033!6.29e-24!63;UBERON:0002346!9.71e-24!71;UBERON:0003075!9.71e-24!71;UBERON:0007284!9.71e-24!71;UBERON:0000955!1.09e-23!50;UBERON:0006238!1.09e-23!50;UBERON:0002616!3.84e-23!49;UBERON:0003056!1.42e-18!49;UBERON:0003080!3.33e-18!40;UBERON:0002780!1.18e-17!39;UBERON:0001890!1.18e-17!39;UBERON:0006240!1.18e-17!39;UBERON:0002020!2.25e-17!34;UBERON:0002791!1.55e-14!29;UBERON:0003528!1.55e-14!29;UBERON:0001893!1.55e-14!29;UBERON:0007811!1.57e-12!86;UBERON:0000153!1.69e-12!94;UBERON:0000956!6.13e-10!21;UBERON:0001869!6.13e-10!21;UBERON:0000203!6.13e-10!21;UBERON:0002619!2.06e-09!17;UBERON:0003076!4.05e-07!12;UBERON:0003057!4.05e-07!12;UBERON:0002021!5.17e-07!10;UBERON:0000411!5.17e-07!10;UBERON:0001950!5.17e-07!10 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.92e-32,73;UBERON:0004121,7.91e-32,95;UBERON:0000924,7.91e-32,95;UBERON:0006601,7.91e-32,95;UBERON:0001016,7.31e-30,75;UBERON:0010371,1.03e-26,73;UBERON:0000073,3.03e-26,54;UBERON:0001049,9.79e-25,52;UBERON:0005068,9.79e-25,52;UBERON:0006241,9.79e-25,52;UBERON:0007135,9.79e-25,52;UBERON:0002346,1.19e-24,64;UBERON:0003075,1.19e-24,64;UBERON:0007284,1.19e-24,64;UBERON:0000955,9.79e-22,47;UBERON:0006238,9.79e-22,47;UBERON:0002616,3.36e-21,46;UBERON:0003056,1.42e-18,49;UBERON:0010314,2.07e-18,92;UBERON:0003080,3.33e-18,40;UBERON:0002780,1.18e-17,39;UBERON:0001890,1.18e-17,39;UBERON:0006240,1.18e-17,39;UBERON:0002020,2.25e-17,34;UBERON:0003528,1.55e-14,29;UBERON:0002791,1.55e-14,29;UBERON:0001893,1.55e-14,29;UBERON:0000956,6.12e-10,21;UBERON:0001869,6.12e-10,21;UBERON:0000203,6.12e-10,21;UBERON:0002619,2.06e-09,17;UBERON:0003076,4.05e-07,12;UBERON:0003057,4.05e-07,12;UBERON:0002021,5.17e-07,10;UBERON:0000411,5.17e-07,10;UBERON:0001950,5.17e-07,10 | |||
|phase1_expression=11.2104192973356,5.58360652222978,3.18499467572675,6.95667686005709,12.0214975187123,4.53274034162102,6.07392865548367,5.03580961422147,4.22366166455,3.27690336850791,1.71217968225505,4.22792442675283,4.45121897821135,5.94458736449182,2.99798785634096,2.42970320867791,0.699561878128147,5.67831897644828,4.52477630898938,4.2438965179803,12.7564935226605,7.74469419366905,6.52999472847338,3.99981056983517,2.98232065387321,4.01962374880514,3.4460959692726,3.23206849028834,1.14014051673824,0.756090389279792,3.76941868114018,8.25539875497521,9.84103660135312,0,4.04392267651784,1.66234645358492,4.69589519403449,2.51118978442145,2.3440060335714,3.14114246384279,0.588231488031014,0.683045484958446,1.94204141212461,3.27331726736501,3.14268486780495,3.48738829107195,10.9534788208725,11.7733584445441,12.7417985985994,11.8602238435313,7.8392396110203,11.5002051491977,4.36234775750115,6.5282592781021,6.72187598284928,4.11615097657515,2.0057340795713,7.21940929188419,14.7691016427506,14.2827564403449,19.0149421051854,8.13226876965917,10.6715375533337,4.49949858640699,5.93319817540185,3.5524005747305,14.081205194365,21.5162250980071,9.7468235569969,7.83034442323806,8.2026734927039,18.5673139862472,18.3320888989839,11.3916443269907,9.68039257284187,13.7882817991503,19.82085857989,20.42997409363,16.7431121249305,15.9582408153535,17.6571152152651,11.9810075228055,24.5681039121215,19.6966913511088,23.6837284054056,18.2669722993674,16.0879999302986,16.5895506784518,2.27178579999552,2.94729084416464,5.2175607966302,1.72084775396277,2.719885334831,2.69851595818909,3.89865850468601,4.92829575807069,6.46044332606059,3.57903677413921,2.07828803682295,4.24007489412408,10.563256483251,1.28326477414318,0,0,4.97929394325792,4.56047757855178,2.52762222507392,5.02409070763864,6.47344709117929,10.6878340126674,6.93941307064543,7.00270600117925,8.53277339847416,5.72746034099966,6.11461277105665,5.6549966098354,6.17987419335935,3.03658649531814,5.30766331169925,6.79420769779119,5.30019644304944,4.363877278217,1.86391761218122,14.6390398505774,18.0124167859571,3.0654846625031,1.31796636956512,0.599902730993408,0.381210681219194,16.6267609739353,24.2475319493872,17.9685723521396,15.8180131374972,19.4343747571051,19.5320761885986,20.9291229357407,3.7680564624617,6.96679035416521,29.8212854951736,8.62811609134543,5.72529949035896,7.12696523743766,8.10279584124071,10.3986324306643,9.18492738542926,7.94305065766069,10.026084527891,9.31332134660456,3.88022387279116,6.24050064553804,7.38994721488585,9.20622076195814,5.28289773528636,11.1440693287093,8.43706759272568,4.37875387000685,0.702213187313235,1.54408744268829,0.568326998791185,6.00664740352955,4.22146907965973,6.84235833551856,8.52281048106757,8.26409773339096,6.17068451549513,7.20855228726264,6.43856163359086,5.95503246072564,5.59503489705834,3.2833492815819,4.86412857275134,2.63159977365598,3.07370161407471,4.2946054003319,21.0289948564127,10.9078889122042,3.96502539580558,3.70230793328962,2.13288250535234,5.10920678092965,6.18563814346048,4.03367049246685,4.00280478920767,4.37518940058886,3.79623249235609,3.45867804920423,3.01602250560323,3.18330355265841,4.48417400373976,2.69645822596266,2.80979464837102,4.77939055810481,4.74169752382704,5.02693455482807,2.25415471346161,4.07302655690629,5.62462212786115,6.45249542990931,8.22074982615345,6.7900668070617,5.33795674660674,7.28043267138623,4.74324203339438,3.00321190288969,3.53806191203765,2.69834534861824,2.84004169943904,2.41177159752417,3.8193877767213,5.4662266115654,5.83686816390127,4.11842119782122,7.18841032636773,2.97712758134803,4.36852742360385,2.52578877947112,1.4351793081753,5.78932225636041,6.46636165583116,3.7898282354097,3.09633455239849,3.22515662972857,3.75504397261603,6.70025029767263,6.18913466303636,5.65887578787617,4.09851374676097,4.20782910332672,5.89982644032702,6.39066927391378,7.25276923836761,6.07526046042349,3.01582567878545,3.80733978673097,5.4094070032094,8.55403913544671,15.412856638828,19.4571399743057,4.42624352517024,8.07906967053994,7.88770548540642,3.90438744296638,9.90947629570875,8.12493913038677,10.6943363559549,9.34152551603147,10.9298889452221,11.3979784585412,9.48690667071656,15.4234231882467,6.38730383437209,6.7664929393557,4.23506094319298,5.44401405809367,14.6019652173959,6.06951590387454,6.65111825322452,5.65815239267694,7.38254732201932,7.07100840271033,7.49442050187841,10.5424781548477,7.48644494607915,7.26884543252377,7.37930260024991,14.4389760547462,26.5542892487955,6.12207719706455,10.0899773350549,7.50179622610573,13.6551979904551,9.98865378571595,9.87294123612726,17.9634319977614,4.92810586933792,7.20229040936989,9.04166432025344,16.818397800031,10.8181165886257,7.65974146587579,9.78853220825719,10.833299383174,3.20628920292836,13.9068976507882,2.73393409276564,4.33412422722767,1.29636169158798,3.01389531207506,3.8274383761887,3.43167259809784,1.5298058699447,1.39951452323658,1.93479963326193,7.63736494412091,5.06137589729817,8.53941761932765,7.34436317588249,9.82714991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| ||
|short_description=p1@Usp20 | |short_description=p1@Usp20 | ||
}} | }} |
Latest revision as of 13:28, 26 September 2015
Short description: | p1@Usp20 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Usp20_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 0bp_to_ENSMUST00000061544, ENSMUST00000165772_5end |
EntrezGene: | Usp20 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ectodermal cell | 1.60e-13 | 44 |
neurectodermal cell | 1.60e-13 | 44 |
neural cell | 3.14e-13 | 43 |
neuron | 2.54e-12 | 33 |
neuronal stem cell | 2.54e-12 | 33 |
neuroblast | 2.54e-12 | 33 |
electrically signaling cell | 2.54e-12 | 33 |
CNS neuron (sensu Vertebrata) | 2.07e-11 | 23 |
neuroblast (sensu Vertebrata) | 2.07e-11 | 23 |
electrically responsive cell | 1.65e-08 | 39 |
electrically active cell | 1.65e-08 | 39 |