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FFCP PHASE1:Mm9::chr2:30837870..30837896,+: Difference between revisions

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{{FFCP
{{FFCP
|id=chr2:30837870..30837896,+
|DHSsupport=NA
|short_description=p1@Usp20
|DPIdataset=NA
|description=CAGE_peak_1_at_Usp20_5end
|association_with_transcript=0bp_to_ENSMUST00000061544,ENSMUST00000165772_5end
|EntrezGene=74270
|EntrezGene=74270
|HGNC=
|HGNC=
|MCL_coexpression_id=1
|TSSclassifier=NA
|UniProt=Q8C9A6,Q8VCJ2
|UniProt=Q8C9A6,Q8VCJ2
|association_with_transcript=0bp_to_ENSMUST00000061544,ENSMUST00000165772_5end
|cluster_id=chr2:30837870..30837896,+
|description=CAGE_peak_1_at_Usp20_5end
|id=chr2:30837870..30837896,+
|ontology_enrichment_celltype=CL:0000221!1.60e-13!44;CL:0000133!1.60e-13!44;CL:0002319!3.14e-13!43;CL:0000540!2.54e-12!33;CL:0000047!2.54e-12!33;CL:0000031!2.54e-12!33;CL:0000404!2.54e-12!33;CL:0000117!2.07e-11!23;CL:0000337!2.07e-11!23;CL:0000055!5.41e-09!50;CL:0000393!1.65e-08!39;CL:0000211!1.65e-08!39
|ontology_enrichment_celltype_v019_2=CL:0000221,1.60e-13,44;CL:0000133,1.60e-13,44;CL:0002319,3.14e-13,43;CL:0000540,2.54e-12,33;CL:0000047,2.54e-12,33;CL:0000031,2.54e-12,33;CL:0000404,2.54e-12,33;CL:0000117,2.07e-11,23;CL:0000337,2.07e-11,23;CL:0000393,1.65e-08,39;CL:0000211,1.65e-08,39
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001017!2.93e-32!73;UBERON:0005743!2.93e-32!73;UBERON:0004121!2.35e-31!102;UBERON:0000924!2.35e-31!102;UBERON:0006601!2.35e-31!102;UBERON:0000073!7.32e-30!75;UBERON:0001016!7.32e-30!75;UBERON:0001049!9.80e-25!52;UBERON:0005068!9.80e-25!52;UBERON:0006241!9.80e-25!52;UBERON:0007135!9.80e-25!52;UBERON:0000033!6.29e-24!63;UBERON:0002346!9.71e-24!71;UBERON:0003075!9.71e-24!71;UBERON:0007284!9.71e-24!71;UBERON:0000955!1.09e-23!50;UBERON:0006238!1.09e-23!50;UBERON:0002616!3.84e-23!49;UBERON:0003056!1.42e-18!49;UBERON:0003080!3.33e-18!40;UBERON:0002780!1.18e-17!39;UBERON:0001890!1.18e-17!39;UBERON:0006240!1.18e-17!39;UBERON:0002020!2.25e-17!34;UBERON:0002791!1.55e-14!29;UBERON:0003528!1.55e-14!29;UBERON:0001893!1.55e-14!29;UBERON:0007811!1.57e-12!86;UBERON:0000153!1.69e-12!94;UBERON:0000956!6.13e-10!21;UBERON:0001869!6.13e-10!21;UBERON:0000203!6.13e-10!21;UBERON:0002619!2.06e-09!17;UBERON:0003076!4.05e-07!12;UBERON:0003057!4.05e-07!12;UBERON:0002021!5.17e-07!10;UBERON:0000411!5.17e-07!10;UBERON:0001950!5.17e-07!10
|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.92e-32,73;UBERON:0004121,7.91e-32,95;UBERON:0000924,7.91e-32,95;UBERON:0006601,7.91e-32,95;UBERON:0001016,7.31e-30,75;UBERON:0010371,1.03e-26,73;UBERON:0000073,3.03e-26,54;UBERON:0001049,9.79e-25,52;UBERON:0005068,9.79e-25,52;UBERON:0006241,9.79e-25,52;UBERON:0007135,9.79e-25,52;UBERON:0002346,1.19e-24,64;UBERON:0003075,1.19e-24,64;UBERON:0007284,1.19e-24,64;UBERON:0000955,9.79e-22,47;UBERON:0006238,9.79e-22,47;UBERON:0002616,3.36e-21,46;UBERON:0003056,1.42e-18,49;UBERON:0010314,2.07e-18,92;UBERON:0003080,3.33e-18,40;UBERON:0002780,1.18e-17,39;UBERON:0001890,1.18e-17,39;UBERON:0006240,1.18e-17,39;UBERON:0002020,2.25e-17,34;UBERON:0003528,1.55e-14,29;UBERON:0002791,1.55e-14,29;UBERON:0001893,1.55e-14,29;UBERON:0000956,6.12e-10,21;UBERON:0001869,6.12e-10,21;UBERON:0000203,6.12e-10,21;UBERON:0002619,2.06e-09,17;UBERON:0003076,4.05e-07,12;UBERON:0003057,4.05e-07,12;UBERON:0002021,5.17e-07,10;UBERON:0000411,5.17e-07,10;UBERON:0001950,5.17e-07,10
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268003,6.33251434863915,6.06889558731693,6.61227645802687,4.97336289769656,3.11075935900303,1.86401793926078,12.9649375897364,4.33597983527538,4.96375471371293,7.19469396872976,5.16639293910924,6.25137664315879,4.3422178298929,3.1249052362548,5.66240459898839,9.90494895386625,12.6733202753461,2.8441000856536,2.8381530140623,3.59488350076895,4.02754551231165,4.29664069601955,6.75516606256301,6.00977247599844,4.28299628806274,5.04832249740738,7.92550789211998,6.15039729334727,5.06780979846713,5.58028681513911,8.76576766361767,10.2028672626845,3.10780334723691,3.22969883794113,2.85403847818933,7.92077335531981,3.19060208267009,3.11357761254351,6.21668299329291,20.0628841614145,18.0720589637461,22.5559365888517,15.4681788628637,13.2326950404639,22.6077231524312,14.3524840504043,20.2506750069542,21.1650965515384,17.672553950384,22.2636934053283,3.84013186061454,5.98537310101547,8.53668028770671,9.48116196566347,6.28839487883947,6.25067928730048,8.66762238426299,8.03536723231687,8.3438994493872,9.6024940470243,9.63221339582911,8.11093267960128,7.86588662747012,7.23484222175023,8.50044940543076,10.0021675169445,8.80720877180902,6.94473193669338,7.00546031365621,12.0703114510206,7.88599280486455,6.74408063405482,8.82213902805088,11.046327664057,11.2931256498397,9.22299226019274,7.68297486065645,11.5750673032651,8.01244271690584,11.2228454331548,13.4057570480317,9.65343927280522,8.18462086339379,7.7468420592983,6.94463799532109,14.2392029424629,9.35726433781634,7.52048689169044,10.1382815996487,9.26483960301965,7.18790290423307
|phase1_expression=11.2104192973356,5.58360652222978,3.18499467572675,6.95667686005709,12.0214975187123,4.53274034162102,6.07392865548367,5.03580961422147,4.22366166455,3.27690336850791,1.71217968225505,4.22792442675283,4.45121897821135,5.94458736449182,2.99798785634096,2.42970320867791,0.699561878128147,5.67831897644828,4.52477630898938,4.2438965179803,12.7564935226605,7.74469419366905,6.52999472847338,3.99981056983517,2.98232065387321,4.01962374880514,3.4460959692726,3.23206849028834,1.14014051673824,0.756090389279792,3.76941868114018,8.25539875497521,9.84103660135312,0,4.04392267651784,1.66234645358492,4.69589519403449,2.51118978442145,2.3440060335714,3.14114246384279,0.588231488031014,0.683045484958446,1.94204141212461,3.27331726736501,3.14268486780495,3.48738829107195,10.9534788208725,11.7733584445441,12.7417985985994,11.8602238435313,7.8392396110203,11.5002051491977,4.36234775750115,6.5282592781021,6.72187598284928,4.11615097657515,2.0057340795713,7.21940929188419,14.7691016427506,14.2827564403449,19.0149421051854,8.13226876965917,10.6715375533337,4.49949858640699,5.93319817540185,3.5524005747305,14.081205194365,21.5162250980071,9.7468235569969,7.83034442323806,8.2026734927039,18.5673139862472,18.3320888989839,11.3916443269907,9.68039257284187,13.7882817991503,19.82085857989,20.42997409363,16.7431121249305,15.9582408153535,17.6571152152651,11.9810075228055,24.5681039121215,19.6966913511088,23.6837284054056,18.2669722993674,16.0879999302986,16.5895506784518,2.27178579999552,2.94729084416464,5.2175607966302,1.72084775396277,2.719885334831,2.69851595818909,3.89865850468601,4.92829575807069,6.46044332606059,3.57903677413921,2.07828803682295,4.24007489412408,10.563256483251,1.28326477414318,0,0,4.97929394325792,4.56047757855178,2.52762222507392,5.02409070763864,6.47344709117929,10.6878340126674,6.93941307064543,7.00270600117925,8.53277339847416,5.72746034099966,6.11461277105665,5.6549966098354,6.17987419335935,3.03658649531814,5.30766331169925,6.79420769779119,5.30019644304944,4.363877278217,1.86391761218122,14.6390398505774,18.0124167859571,3.0654846625031,1.31796636956512,0.599902730993408,0.381210681219194,16.6267609739353,24.2475319493872,17.9685723521396,15.8180131374972,19.4343747571051,19.5320761885986,20.9291229357407,3.7680564624617,6.96679035416521,29.8212854951736,8.62811609134543,5.72529949035896,7.12696523743766,8.10279584124071,10.3986324306643,9.18492738542926,7.94305065766069,10.026084527891,9.31332134660456,3.88022387279116,6.24050064553804,7.38994721488585,9.20622076195814,5.28289773528636,11.1440693287093,8.43706759272568,4.37875387000685,0.702213187313235,1.54408744268829,0.568326998791185,6.00664740352955,4.22146907965973,6.84235833551856,8.52281048106757,8.26409773339096,6.17068451549513,7.20855228726264,6.43856163359086,5.95503246072564,5.59503489705834,3.2833492815819,4.86412857275134,2.63159977365598,3.07370161407471,4.2946054003319,21.0289948564127,10.9078889122042,3.96502539580558,3.70230793328962,2.13288250535234,5.10920678092965,6.18563814346048,4.03367049246685,4.00280478920767,4.37518940058886,3.79623249235609,3.45867804920423,3.01602250560323,3.18330355265841,4.48417400373976,2.69645822596266,2.80979464837102,4.77939055810481,4.74169752382704,5.02693455482807,2.25415471346161,4.07302655690629,5.62462212786115,6.45249542990931,8.22074982615345,6.7900668070617,5.33795674660674,7.28043267138623,4.74324203339438,3.00321190288969,3.53806191203765,2.69834534861824,2.84004169943904,2.41177159752417,3.8193877767213,5.4662266115654,5.83686816390127,4.11842119782122,7.18841032636773,2.97712758134803,4.36852742360385,2.52578877947112,1.4351793081753,5.78932225636041,6.46636165583116,3.7898282354097,3.09633455239849,3.22515662972857,3.75504397261603,6.70025029767263,6.18913466303636,5.65887578787617,4.09851374676097,4.20782910332672,5.89982644032702,6.39066927391378,7.25276923836761,6.07526046042349,3.01582567878545,3.80733978673097,5.4094070032094,8.55403913544671,15.412856638828,19.4571399743057,4.42624352517024,8.07906967053994,7.88770548540642,3.90438744296638,9.90947629570875,8.12493913038677,10.6943363559549,9.34152551603147,10.9298889452221,11.3979784585412,9.48690667071656,15.4234231882467,6.38730383437209,6.7664929393557,4.23506094319298,5.44401405809367,14.6019652173959,6.06951590387454,6.65111825322452,5.65815239267694,7.38254732201932,7.07100840271033,7.49442050187841,10.5424781548477,7.48644494607915,7.26884543252377,7.37930260024991,14.4389760547462,26.5542892487955,6.12207719706455,10.0899773350549,7.50179622610573,13.6551979904551,9.98865378571595,9.87294123612726,17.9634319977614,4.92810586933792,7.20229040936989,9.04166432025344,16.818397800031,10.8181165886257,7.65974146587579,9.78853220825719,10.833299383174,3.20628920292836,13.9068976507882,2.73393409276564,4.33412422722767,1.29636169158798,3.01389531207506,3.8274383761887,3.43167259809784,1.5298058699447,1.39951452323658,1.93479963326193,7.63736494412091,5.06137589729817,8.53941761932765,7.34436317588249,9.82714991268003,6.33251434863915,6.06889558731693,6.61227645802687,4.97336289769656,3.11075935900303,1.86401793926078,12.9649375897364,4.33597983527538,4.96375471371293,7.19469396872976,5.16639293910924,6.25137664315879,4.3422178298929,3.1249052362548,5.66240459898839,9.90494895386625,12.6733202753461,2.8441000856536,2.8381530140623,3.59488350076895,4.02754551231165,4.29664069601955,6.75516606256301,6.00977247599844,4.28299628806274,5.04832249740738,7.92550789211998,6.15039729334727,5.06780979846713,5.58028681513911,8.76576766361767,10.2028672626845,3.10780334723691,3.22969883794113,2.85403847818933,7.92077335531981,3.19060208267009,3.11357761254351,6.21668299329291,20.0628841614145,18.0720589637461,22.5559365888517,15.4681788628637,13.2326950404639,22.6077231524312,14.3524840504043,20.2506750069542,21.1650965515384,17.672553950384,22.2636934053283,3.84013186061454,5.98537310101547,8.53668028770671,9.48116196566347,6.28839487883947,6.25067928730048,8.66762238426299,8.03536723231687,8.3438994493872,9.6024940470243,9.63221339582911,8.11093267960128,7.86588662747012,7.23484222175023,8.50044940543076,10.0021675169445,8.80720877180902,6.94473193669338,7.00546031365621,12.0703114510206,7.88599280486455,6.74408063405482,8.82213902805088,11.046327664057,11.2931256498397,9.22299226019274,7.68297486065645,11.5750673032651,8.01244271690584,11.2228454331548,13.4057570480317,9.65343927280522,8.18462086339379,7.7468420592983,6.94463799532109,14.2392029424629,9.35726433781634,7.52048689169044,10.1382815996487,9.26483960301965,7.18790290423307
|short_description=p1@Usp20
}}
}}

Latest revision as of 13:28, 26 September 2015

Short description:p1@Usp20
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Usp20_5end
Coexpression cluster:MCL_coexpression_mm9:1
Association with transcript: 0bp_to_ENSMUST00000061544, ENSMUST00000165772_5end
EntrezGene:Usp20
Link to Zenbu:ZENBU


View on UCSC genome browser

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CAGE Expression

Sample

p1@Usp20

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G711.21
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I55.58
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I63.18
CD326+ enterocyte, pool1.CNhs13542.11848-124I36.96
CD326+ enterocyte, pool2.CNhs13197.11849-124I412.02
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I74.53
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I86.07
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E95.04
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E74.22
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F23.28
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E61.71
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F14.23
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E44.45
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E85.94
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A13.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A32.43
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.70
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A25.68
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A44.52
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A64.24
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A312.76
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H27.74
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I96.53
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D14.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D22.98
GP2+ M cell, pool1.CNhs13228.11845-124H94.02
GP2+ M cell, pool2.CNhs13231.11846-124I13.45
GP2+ M cell, pool3.CNhs13240.11847-124I23.23
Ileum epithelium, pool1.CNhs13199.10252-104B91.14
Ileum epithelium, pool2.CNhs13232.10253-104C10.76
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C83.77
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I38.26
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G69.84
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F54.04
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F61.66
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F74.70
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G82.51
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H12.34
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H33.14
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.59
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.68
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H41.94
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D83.27
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D93.14
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B33.49
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B710.95
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C211.77
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B812.74
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C311.86
Mouse Astrocytes, donor2.CNhs12078.11552-120C47.84
Mouse Astrocytes, donor3.CNhs12107.11633-122C411.50
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A24.36
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I96.53
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A16.72
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C14.12
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E12.01
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C57.22
Mouse Granule cells, donor1.CNhs12131.11713-123C314.77
Mouse Granule cells, donor2.CNhs12357.11731-123E314.28
Mouse Granule cells, donor3.CNhs12108.11636-122C719.01
Mouse Meningeal cells, donor1.CNhs12132.11716-123C68.13
Mouse Meningeal cells, donor3.CNhs12109.11639-122D110.67
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C74.50
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E75.93
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D23.55
Mouse Microglia, donor1.CNhs12629.11718-123C814.08
Mouse Microglia, donor2.CNhs12634.11736-123E821.52
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D59.75
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F57.83
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D98.20
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F118.57
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D518.33
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D211.39
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F29.68
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D613.79
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D319.82
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F320.43
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D716.74
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D415.96
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F417.66
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D811.98
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E424.57
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E519.70
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I623.68
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D618.27
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F616.09
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E116.59
Mouse Schwann, donor1.CNhs12507.11728-123D92.27
Mouse Schwann, donor2.CNhs12573.11746-123F92.95
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G35.22
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F71.72
Mouse hepatocyte, donor1.CNhs13078.11714-123C42.72
Mouse hepatocyte, donor3.CNhs12615.11637-122C82.70
Mouse hepatocyte, donor6.CNhs13090.11822-124F43.90
Mouse hepatocyte, donor8.CNhs13091.11824-124F64.93
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A76.46
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I73.58
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E32.08
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I84.24
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G610.56
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H11.28
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G14.98
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G24.56
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G32.53
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B65.02
accessory axillary lymph node, adult.CNhs10475.1063-29H96.47
adrenal gland, adult.CNhs10508.49-24D710.69
adrenal gland, embryo E14.CNhs11038.406-44C56.94
adrenal gland, embryo E16.CNhs11004.1254-43D67.00
adrenal gland, embryo E17.CNhs11043.1263-45I18.53
adrenal gland, embryo E18.CNhs11026.1262-18F55.73
adrenal gland, neonate N00.CNhs11191.1311-23C16.11
adrenal gland, neonate N25.CNhs11223.1377-27I35.65
amnion, adult pregnant day17.5.CNhs10488.583-22A86.18
aorta, adult.CNhs10498.46-23H13.04
bone (os femoris), adult.CNhs10483.56-12G25.31
bone (os femoris), neonate N02.CNhs11227.1985-43F56.79
bone (os femoris), neonate N16.CNhs11225.1525-43A65.30
bone (os femoris), neonate N20.CNhs11195.1350-25C34.36
cecum, adult.CNhs10467.37-13H41.86
cerebellum, adult.CNhs10494.15-8B214.64
cerebellum, neonate N30.CNhs11135.1395-42I218.01
colon, adult.CNhs10468.36-18H73.07
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C71.32
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.60
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.38
corpora quadrigemina, adult.CNhs10501.16-22A416.63
corpus striatum, adult.CNhs10487.19-21D824.25
corpus striatum, neonate N00.CNhs11226.630-43F117.97
cortex, adult.CNhs10473.12-14D515.82
cortex, neonate N30.CNhs11107.1392-42F219.43
diencephalon, adult.CNhs10482.20-12F219.53
diencephalon, neonate N30.CNhs11201.1388-42B220.93
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B13.77
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A26.97
epididymis, adult.CNhs10490.58-23B229.82
eyeball, adult.CNhs10484.31-12G48.63
eyeball, embryo E12.CNhs11016.345-16C65.73
eyeball, embryo E14.CNhs10521.399-16E27.13
eyeball, embryo E15.CNhs10593.426-16C98.10
eyeball, embryo E17.CNhs11023.1261-18D410.40
eyeball, neonate N00.CNhs11207.633-15C69.18
eyeball, neonate N01.CNhs11140.1532-43E77.94
eyeball, neonate N02.CNhs11205.1551-44G810.03
eyeball, neonate N16.CNhs11188.777-19A29.31
forelimb, embryo E11.CNhs10596.335-25E23.88
forelimb, embryo E12.CNhs10600.359-14H26.24
forelimb, embryo E13.CNhs10589.384-1E27.39
forelimb, embryo E14.CNhs10577.413-26A89.21
forelimb, embryo E15.CNhs11007.437-20E75.28
forelimb, embryo E17.CNhs10598.1517-43C411.14
forelimb, embryo E18.CNhs11008.1520-43B58.44
gonad, embryo E13.CNhs11044.1564-45I64.38
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.70
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D21.54
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.57
heart, embryo E11.CNhs10586.331-24E96.01
heart, embryo E12.CNhs11015.353-12F54.22
heart, embryo E13.CNhs11013.376-3I96.84
heart, embryo E14.CNhs10597.403-26D48.52
heart, embryo E15.CNhs11017.431-16C88.26
heart, embryo E16.CNhs11021.457-17C66.17
heart, embryo E17.CNhs11025.479-18E57.21
heart, embryo E18.CNhs11030.1283-20G36.44
heart, neonate N00.CNhs11213.639-21E35.96
heart, neonate N03.CNhs11221.1349-25I25.60
heart, neonate N10.CNhs11118.749-24G13.28
heart, neonate N16.CNhs11209.782-15G14.86
heart, neonate N20.CNhs11127.821-26I62.63
heart, neonate N25.CNhs11196.1351-25D33.07
heart, neonate N30.CNhs11202.1390-42D24.29
hippocampus, adult.CNhs10478.13-16E821.03
hippocampus, neonate N00.CNhs11228.627-43G110.91
intestinal mucosa, adult.CNhs10506.860-29I33.97
intestine, adult.CNhs10496.178-9A33.70
intestine, embryo E12.CNhs11019.1251-16I52.13
intestine, embryo E13.CNhs11010.381-16D55.11
intestine, embryo E15.CNhs10602.976-16D86.19
intestine, embryo E16.CNhs10585.463-22H44.03
intestine, embryo E17.CNhs10582.482-18D34.00
intestine, embryo E18.CNhs10526.1289-20F74.38
intestine, neonate N00.CNhs11126.644-26D13.80
intestine, neonate N01.CNhs11192.1322-23E93.46
intestine, neonate N06.CNhs11102.688-20B83.02
intestine, neonate N07.CNhs11095.720-20F23.18
intestine, neonate N10.CNhs11098.755-23A54.48
intestine, neonate N20.CNhs11187.827-18D12.70
intestine, neonate N25.CNhs11121.1352-25E32.81
intestine, neonate N30.CNhs11131.1384-42G14.78
kidney, embryo E14.CNhs10606.411-4I94.74
kidney, embryo E15.CNhs10997.434-16F85.03
kidney, embryo E16.CNhs10584.464-22A52.25
kidney, embryo E17.CNhs11028.483-18I24.07
kidney, embryo E18.CNhs11001.1288-20C75.62
kidney, neonate N00.CNhs11214.646-21G76.45
kidney, neonate N10.CNhs11206.758-6D58.22
kidney, neonate N20.CNhs11113.832-19I16.79
kidney, neonate N25.CNhs11122.1353-25F35.34
kidney, neonate N30.CNhs11203.1385-42H17.28
liver, adult pregnant day01.CNhs10466.508-5B24.74
liver, embryo E12.CNhs10601.355-15F83.00
liver, embryo E13.CNhs10524.378-3H63.54
liver, embryo E14.CNhs10594.409-16E12.70
liver, embryo E15.CNhs10520.433-16D72.84
liver, embryo E16.CNhs10523.462-17F52.41
liver, embryo E17.CNhs10510.481-18A33.82
liver, embryo E18.CNhs10579.499-43G45.47
liver, neonate N00.CNhs11117.641-24F45.84
liver, neonate N03.CNhs11123.1345-25G24.12
liver, neonate N06.CNhs11101.684-20A87.19
liver, neonate N07.CNhs11103.716-20H22.98
liver, neonate N10.CNhs11115.751-24B94.37
liver, neonate N20.CNhs11220.823-25A32.53
liver, neonate N25.CNhs11198.1368-26H11.44
liver, neonate N30.CNhs11106.1382-42D15.79
lung, adult.CNhs10474.28-22B16.47
lung, embryo E12.CNhs10522.354-16G23.79
lung, embryo E14.CNhs10604.404-26F83.10
lung, embryo E15.CNhs11020.432-17C53.23
lung, embryo E16.CNhs10998.458-17B63.76
lung, embryo E17.CNhs10605.480-44A66.70
lung, embryo E18.CNhs10583.1287-20I66.19
lung, neonate N00.CNhs11224.640-42C65.66
lung, neonate N06.CNhs11212.683-20E54.10
lung, neonate N07.CNhs11111.715-19A34.21
lung, neonate N10.CNhs11219.750-23E65.90
lung, neonate N20.CNhs11109.822-18A46.39
lung, neonate N25.CNhs11119.1359-25C77.25
lung, neonate N30.CNhs11133.1394-42H26.08
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A13.02
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A13.81
mammary gland, adult lactating day02.CNhs10480.595-22B65.41
mammary gland, adult pregnant day19.CNhs10476.588-5H28.55
medulla oblongata, adult.CNhs10477.17-12C215.41
medulla oblongata, neonate N30.CNhs11200.1396-42A319.46
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C74.43
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C28.08
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E17.89
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E23.90
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E39.91
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D78.12
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D810.69
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D99.34
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D410.93
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D511.40
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D69.49
olfactory brain, adult.CNhs10489.18-22I915.42
ovary, adult.CNhs10507.91-2I76.39
ovary, embryo E18.CNhs11040.505-44H76.77
ovary, neonate N00.CNhs11217.1299-22I44.24
oviduct, adult pregnant day01.CNhs10500.988-6G65.44
pancreas, adult.CNhs10486.34-16E414.60
pancreas, embryo E14.CNhs11012.405-44F46.07
pancreas, embryo E15.CNhs11042.1556-45F26.65
pancreas, embryo E16.CNhs11003.460-26E55.66
pancreas, embryo E17.CNhs10599.1558-45G37.38
pancreas, embryo E18.CNhs10580.1535-43I77.07
pancreas, neonate N00.CNhs11105.645-26G97.49
pancreas, neonate N01.CNhs11138.1531-43D710.54
pancreas, neonate N02.CNhs11139.1539-43D87.49
pancreas, neonate N16.CNhs11136.787-43B67.27
pancreas, neonate N25.CNhs11094.1555-45E27.38
pancreas, neonate N30.CNhs11182.1548-44H514.44
pituitary gland, adult.CNhs10493.21-1G826.55
pituitary gland, embryo E12.CNhs11018.346-16E66.12
pituitary gland, embryo E13.CNhs11009.370-44C710.09
pituitary gland, embryo E14.CNhs11037.398-44A57.50
pituitary gland, embryo E15.CNhs10592.427-16B913.66
pituitary gland, embryo E16.CNhs11036.449-43F69.99
pituitary gland, embryo E17.CNhs11039.1265-44F59.87
pituitary gland, neonate N00.CNhs11190.1308-22E917.96
placenta, adult pregnant day10.CNhs10472.539-13I74.93
placenta, adult pregnant day17.CNhs10464.577-18G37.20
prostate, adult.CNhs10470.859-1F89.04
skin, adult.CNhs10492.30-1C316.82
skin, neonate N00.CNhs11124.650-25G410.82
skin, neonate N03.CNhs11215.662-22H37.66
skin, neonate N06.CNhs11097.693-20I59.79
skin, neonate N10.CNhs11108.762-6C410.83
small intestine, neonate N16.CNhs11114.790-21I13.21
spinal cord, adult.CNhs10505.24-13C913.91
spleen, adult.CNhs10465.25-2G22.73
spleen, embryo E16.CNhs11035.461-43C14.33
spleen, embryo E18.CNhs11011.1271-21F21.30
spleen, neonate N10.CNhs11116.752-24D13.01
spleen, neonate N20.CNhs11112.824-19H13.83
spleen, neonate N25.CNhs11099.1354-25G33.43
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C61.53
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C91.40
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D31.93
stomach, adult.CNhs10503.33-1H67.64
stomach, embryo E12.CNhs10588.356-43E35.06
stomach, embryo E15.CNhs10603.1252-16G88.54
stomach, embryo E16.CNhs11022.459-17D47.34
stomach, embryo E17.CNhs11006.1035-18D59.83
stomach, embryo E18.CNhs10999.1286-20C66.33
stomach, neonate N03.CNhs11193.1340-24B86.07
stomach, neonate N07.CNhs11210.718-18A96.61
stomach, neonate N25.CNhs11104.1355-25E44.97
stomach, neonate N30.CNhs11134.1386-42I13.11
submandibular gland, adult.CNhs10469.59-29C11.86
testis, adult.CNhs10504.57-7G512.96
testis, embryo E13.CNhs11031.389-23F54.34
testis, embryo E15.CNhs11034.443-27C54.96
testis, embryo E16.CNhs11033.470-26G57.19
testis, embryo E17.CNhs11029.486-18I55.17
testis, embryo E18.CNhs11027.503-18G56.25
testis, neonate N00.CNhs11189.1300-22B74.34
testis, neonate N07.CNhs11222.726-26I43.12
testis, neonate N10.CNhs11204.763-44D95.66
testis, neonate N20.CNhs11110.839-18H39.90
testis, neonate N30.CNhs11130.1391-42E212.67
thymus, adult.CNhs10471.38-12B52.84
thymus, embryo E14.CNhs11041.402-44I42.84
thymus, embryo E15.CNhs11005.430-45I23.59
thymus, embryo E16.CNhs11002.456-26C54.03
thymus, embryo E17.CNhs10581.478-18C14.30
thymus, embryo E18.CNhs10595.1273-19G46.76
thymus, neonate N02.CNhs11181.1541-43F86.01
thymus, neonate N03.CNhs11137.2104-43C74.28
thymus, neonate N06.CNhs11197.681-26C45.05
thymus, neonate N07.CNhs11211.713-19D37.93
thymus, neonate N10.CNhs11194.748-24E46.15
thymus, neonate N20.CNhs11186.820-7A25.07
thymus, neonate N25.CNhs11125.1362-25G75.58
thymus, neonate N30.CNhs11132.1393-42G28.77
tongue, adult.CNhs10499.32-1B410.20
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H33.11
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F73.23
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G52.85
urinary bladder, adult.CNhs10481.879-12E47.92
uterus, adult pregnant day19.CNhs10497.590-15F53.19
uterus, adult.CNhs10509.92-27E53.11
vagina, adult.CNhs10502.89-27D56.22
vesicular gland, adult.CNhs10491.51-27F820.06
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A118.07
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A222.56
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A315.47
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D713.23
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A422.61
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A514.35
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A620.25
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A721.17
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A817.67
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A922.26
whole body, embryo E11.CNhs11014.324-5I83.84
whole body, embryo E12.CNhs10587.857-27C95.99
whole body, embryo E13.CNhs10512.372-23H28.54
whole body, embryo E14.5.CNhs10578.420-27D29.48
whole body, embryo E14.CNhs10519.395-14B16.29
whole body, embryo E16.CNhs10514.453-14F26.25
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G58.67
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G58.04
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G58.34
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G59.60
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G59.63
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G58.11
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G57.87
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G57.23
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G58.50
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G510.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G58.81
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G56.94
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G57.01
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G512.07
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G57.89
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G56.74
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G58.82
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G511.05
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G511.29
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G59.22
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G57.68
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G511.58
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G58.01
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G511.22
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G513.41
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G59.65
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G58.18
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G57.75
whole body, embryo E17.5.CNhs10513.490-9F96.94
whole body, embryo E17.CNhs10517.475-3I514.24
whole body, embryo E18.CNhs10516.493-3B39.36
whole body, neonate N00.CNhs10525.657-19C27.52
whole body, neonate N01.CNhs10576.659-23C610.14
whole body, neonate N06.CNhs10515.692-21D19.26
whole body, neonate N10.CNhs10518.761-6B47.19





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
ectodermal cell1.60e-1344
neurectodermal cell1.60e-1344
neural cell3.14e-1343
neuron2.54e-1233
neuronal stem cell2.54e-1233
neuroblast2.54e-1233
electrically signaling cell2.54e-1233
CNS neuron (sensu Vertebrata)2.07e-1123
neuroblast (sensu Vertebrata)2.07e-1123
electrically responsive cell1.65e-0839
electrically active cell1.65e-0839

Uber anatomy
Ontology termp-valuen
central nervous system2.92e-3273
ectoderm-derived structure7.91e-3295
ectoderm7.91e-3295
presumptive ectoderm7.91e-3295
nervous system7.31e-3075
ecto-epithelium1.03e-2673
regional part of nervous system3.03e-2654
neural tube9.79e-2552
neural rod9.79e-2552
future spinal cord9.79e-2552
neural keel9.79e-2552
neurectoderm1.19e-2464
neural plate1.19e-2464
presumptive neural plate1.19e-2464
brain9.79e-2247
future brain9.79e-2247
regional part of brain3.36e-2146
pre-chordal neural plate1.42e-1849
structure with developmental contribution from neural crest2.07e-1892
anterior neural tube3.33e-1840
regional part of forebrain1.18e-1739
forebrain1.18e-1739
future forebrain1.18e-1739
gray matter2.25e-1734
brain grey matter1.55e-1429
regional part of telencephalon1.55e-1429
telencephalon1.55e-1429
cerebral cortex6.12e-1021
cerebral hemisphere6.12e-1021
pallium6.12e-1021
regional part of cerebral cortex2.06e-0917
posterior neural tube4.05e-0712
chordal neural plate4.05e-0712
occipital lobe5.17e-0710
visual cortex5.17e-0710
neocortex5.17e-0710
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