Personal tools

FFCP PHASE1:Mm9::chr4:137237578..137237634,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
(5 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=110351
|EntrezGene=110351
|HGNC=
|HGNC=
|TSSclassifier=NA
|UniProt=E9PZZ8,Q6A063,A2ALS4
|UniProt=E9PZZ8,Q6A063,A2ALS4
|association_with_transcript=0bp_to_ENSMUST00000047243,NM_001081155,uc008vjn.1,uc008vjo.1_5end
|association_with_transcript=0bp_to_ENSMUST00000047243,NM_001081155,uc008vjn.1,uc008vjo.1_5end
|cluster_id=chr4:137237578..137237634,+
|description=CAGE_peak_3_at_Rap1gap_5end
|description=CAGE_peak_3_at_Rap1gap_5end
|id=chr4:137237578..137237634,+
|id=chr4:137237578..137237634,+
|ontology_enrichment_celltype=CL:0000540!1.51e-12!33;CL:0000047!1.51e-12!33;CL:0000031!1.51e-12!33;CL:0000404!1.51e-12!33;CL:0000221!4.59e-12!44;CL:0000133!4.59e-12!44;CL:0002319!2.01e-11!43;CL:0000117!1.67e-09!23;CL:0000337!1.67e-09!23;CL:0000393!2.71e-08!39;CL:0000211!2.71e-08!39;CL:0000055!5.45e-08!50
|ontology_enrichment_celltype_v019_2=CL:0000540,4.24e-13,33;CL:0000047,4.24e-13,33;CL:0000031,4.24e-13,33;CL:0000404,4.24e-13,33;CL:0000221,2.01e-11,44;CL:0000133,2.01e-11,44;CL:0002319,1.08e-10,43;CL:0000117,1.30e-10,23;CL:0000337,1.30e-10,23;CL:0000393,1.92e-09,39;CL:0000211,1.92e-09,39
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001017!6.79e-25!73;UBERON:0005743!6.79e-25!73;UBERON:0000073!1.63e-24!75;UBERON:0001016!1.63e-24!75;UBERON:0004121!1.52e-23!102;UBERON:0000924!1.52e-23!102;UBERON:0006601!1.52e-23!102;UBERON:0001049!1.87e-17!52;UBERON:0005068!1.87e-17!52;UBERON:0006241!1.87e-17!52;UBERON:0007135!1.87e-17!52;UBERON:0000033!1.95e-16!63;UBERON:0002346!3.79e-16!71;UBERON:0003075!3.79e-16!71;UBERON:0007284!3.79e-16!71;UBERON:0000955!4.42e-16!50;UBERON:0006238!4.42e-16!50;UBERON:0002616!1.99e-15!49;UBERON:0002020!1.94e-14!34;UBERON:0003080!2.82e-12!40;UBERON:0002780!1.18e-11!39;UBERON:0001890!1.18e-11!39;UBERON:0006240!1.18e-11!39;UBERON:0002791!1.48e-11!29;UBERON:0003528!1.48e-11!29;UBERON:0001893!1.48e-11!29;UBERON:0003056!6.70e-11!49;UBERON:0000153!1.30e-08!94;UBERON:0007811!3.52e-08!86;UBERON:0000956!9.03e-08!21;UBERON:0001869!9.03e-08!21;UBERON:0000203!9.03e-08!21;UBERON:0002619!1.03e-07!17;UBERON:0000468!2.40e-07!333
|ontology_enrichment_uberon_v019_2=UBERON:0001017,3.22e-27,73;UBERON:0001016,7.92e-26,75;UBERON:0004121,3.66e-23,95;UBERON:0000924,3.66e-23,95;UBERON:0006601,3.66e-23,95;UBERON:0000073,7.76e-21,54;UBERON:0001049,1.10e-19,52;UBERON:0005068,1.10e-19,52;UBERON:0006241,1.10e-19,52;UBERON:0007135,1.10e-19,52;UBERON:0002346,8.20e-17,64;UBERON:0003075,8.20e-17,64;UBERON:0007284,8.20e-17,64;UBERON:0000955,2.64e-16,47;UBERON:0006238,2.64e-16,47;UBERON:0010371,2.77e-16,73;UBERON:0002020,4.77e-16,34;UBERON:0002616,1.59e-15,46;UBERON:0003080,5.41e-13,40;UBERON:0003528,1.72e-12,29;UBERON:0002791,1.72e-12,29;UBERON:0001893,1.72e-12,29;UBERON:0002780,3.02e-12,39;UBERON:0001890,3.02e-12,39;UBERON:0006240,3.02e-12,39;UBERON:0003056,3.76e-11,49;UBERON:0010314,6.40e-10,92;UBERON:0002619,1.24e-08,17;UBERON:0002021,4.27e-08,10;UBERON:0000411,4.27e-08,10;UBERON:0001950,4.27e-08,10;UBERON:0000956,7.48e-08,21;UBERON:0001869,7.48e-08,21;UBERON:0000203,7.48e-08,21;UBERON:0003076,9.40e-08,12;UBERON:0003057,9.40e-08,12
|phase1_expression=5.2849119544582,0.697950815278722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.656861476496,0,0,0.47997726838022,0,0,0,0.430942465371778,0,0,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101376931219515,0,0,5.66865406589161,0.439372365468944,0.194429899074283,0.839918529752175,0,0,0,0,0,0,0,2.42779753031517,7.40587370980846,2.53532561402472,0,0,0,0,0,5.39280198933128,14.2160772968975,1.24427534770173,0.945041568321835,0.210324961351382,18.852964970651,17.4486147351775,3.06226998037385,2.77951865952885,3.67687514644008,2.20231761998777,8.2996769755372,6.45147439676223,2.2420668914133,2.65314166446988,5.2091337055676,5.58365998002762,10.1297269805702,9.77908785771585,6.48182888042069,11.3897344639282,2.79599168737951,0.454357159999104,0.453429360640713,21.1601076752225,0.860423876981386,0,0,0,0,0.983110940922263,0,0,0,19.1547050896285,0,0,0,0,0,0,1.1418387971906,0.258937883647172,1.92974780784272,0.173485326766136,0.304465478312141,0.691846491768175,1.20578112442098,1.17588707135705,0.879666139307728,0,0.289198713839823,0,2.42650274921114,0.883366073841574,0,0,5.85561594023094,5.23616767033638,0.255457055208591,0,0,0,13.0317856282196,10.980014467647,7.413606774659,7.82209440865244,9.46147192122223,11.2205544062162,15.7374025175725,0.407357455401265,0.497627882440372,0.505445516867349,1.05220927943237,0,0,0.180062129805349,0.452114453507145,0.476255494059295,1.7935920839879,2.43624483855295,2.06962696591213,0,0.189106080167819,0.879755620819744,2.6303487891309,1.66828349535359,3.48252166522167,2.88094990971121,0,0,0,0,0,0,0,0,0,0.154267112887378,0,0,0,0.16455984991348,0,0.0810688095458557,0.292399974850665,0.219550115291051,0,9.2527577368216,4.83651678182637,0,0,0,0.232236671860439,0.257734922644187,0.80673409849337,0.667134131534611,0.570676878337677,0,0.329397909448022,1.50801125280162,1.39269530428806,1.55971269695296,0,0,0,0,0.342745537829186,0,0.407302655690628,0.193952487167626,0.0701358198903186,4.61626721007078,15.6466756858378,18.6828486131236,14.3140710149289,0.889357881261447,0,0,0,0,0,0,0,0,0.274561413188081,1.43768206527355,0,0.936113019343682,0,0,0,0.739012760666419,0,0,0.169745085775188,0.234690248288502,0.167506257441816,0,0.195133647857799,0.630540576424764,0,0.318909537314974,0.163863314715738,0.345369963731791,0.144649058581512,0,0,0.491764273019036,4.41498794087572,7.06422595946285,10.3146284201139,0.163934945376675,1.26235463602186,0.94652465824877,0.780877488593277,3.66219776145758,4.77937595905104,6.90675889655422,9.05844898524264,2.83367491172426,1.46127928955656,4.34816555741176,12.8528526568723,0.709700426041343,1.24645922567079,0.488660878060728,0.659880491890142,1.32745138339963,0.728341908464944,1.51161778482376,3.58349651536206,3.83892460745005,2.76691633149535,1.55056975900933,5.08947221268508,4.9909632973861,5.05658812697306,2.10837217149998,4.12542172992747,12.2558258071364,0,0.258717367565509,0.428674070063185,0,0.535106452806212,3.1264313914403,3.65357938937519,0,0,0.441056796109924,1.31909002353184,0,0.663442174209714,0.596861720015682,0.492422699235184,0.582961673259701,5.00648315428376,0,0.206386867963223,0,0,0.136694227721025,0,0,0,0,0.954670618015114,0,1.42323626988794,0.86404272657441,1.25452977608681,1.09181281873089,1.61837215661785,1.23980183588004,0.26175594198403,0.518459893167171,4.34937519160848,1.69107881605257,0,0,0.194451188344048,1.03327858782185,0,0.117357238645754,0.2604087696879,0,2.17425708743405,0.864090018773596,0.316011120628178,0,0.102710957164827,0,0.358053391334963,0.198681354781265,0.120195449519969,0.295379054349154,0.403865799792591,0.15241361331,0.100826185136841,0.292373642219257,0.192423683280659,0.584384510907845,2.0405734525369,0,0,0,0.772758376128762,0,0.36630324853453,0.428736758158132,0,9.60078132449013,8.28585425712918,8.59343270159095,4.29632955859219,7.53590771747707,7.55393897389701,9.45031500324528,7.20513925158753,6.79713613476307,4.14208249401456,0.31136204275253,0.798049746802062,0.341467211508268,2.18796045361465,2.09613162627982,0.367687016900028,2.00022055021454,2.26638562962784,3.20919209591815,1.51618327058278,1.01391719956096,1.13175804831646,1.03005658216871,1.79270426733634,1.09127391015665,1.42888107384922,1.85414921511769,0.77163688185482,0.824171801606613,2.50238164228475,2.40008476669791,0.887379030796687,1.1921809497366,2.76158191601424,1.12931256498397,1.94613598150856,1.82927972872773,2.36762740294059,1.22223702461276,1.68342681497322,1.77952527186261,2.1670986122624,2.04615521584845,1.85924209423159,2.12197272079256,2.74791635731741,3.04111090979031,2.36358159453128,2.29545998482612,3.30887128679273,3.01428186306548
|phase1_expression=5.2849119544582,0.697950815278722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.656861476496,0,0,0.47997726838022,0,0,0,0.430942465371778,0,0,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101376931219515,0,0,5.66865406589161,0.439372365468944,0.194429899074283,0.839918529752175,0,0,0,0,0,0,0,2.42779753031517,7.40587370980846,2.53532561402472,0,0,0,0,0,5.39280198933128,14.2160772968975,1.24427534770173,0.945041568321835,0.210324961351382,18.852964970651,17.4486147351775,3.06226998037385,2.77951865952885,3.67687514644008,2.20231761998777,8.2996769755372,6.45147439676223,2.2420668914133,2.65314166446988,5.2091337055676,5.58365998002762,10.1297269805702,9.77908785771585,6.48182888042069,11.3897344639282,2.79599168737951,0.454357159999104,0.453429360640713,21.1601076752225,0.860423876981386,0,0,0,0,0.983110940922263,0,0,0,19.1547050896285,0,0,0,0,0,0,1.1418387971906,0.258937883647172,1.92974780784272,0.173485326766136,0.304465478312141,0.691846491768175,1.20578112442098,1.17588707135705,0.879666139307728,0,0.289198713839823,0,2.42650274921114,0.883366073841574,0,0,5.85561594023094,5.23616767033638,0.255457055208591,0,0,0,13.0317856282196,10.980014467647,7.413606774659,7.82209440865244,9.46147192122223,11.2205544062162,15.7374025175725,0.407357455401265,0.497627882440372,0.505445516867349,1.05220927943237,0,0,0.180062129805349,0.452114453507145,0.476255494059295,1.7935920839879,2.43624483855295,2.06962696591213,0,0.189106080167819,0.879755620819744,2.6303487891309,1.66828349535359,3.48252166522167,2.88094990971121,0,0,0,0,0,0,0,0,0,0.154267112887378,0,0,0,0.16455984991348,0,0.0810688095458557,0.292399974850665,0.219550115291051,0,9.2527577368216,4.83651678182637,0,0,0,0.232236671860439,0.257734922644187,0.80673409849337,0.667134131534611,0.570676878337677,0,0.329397909448022,1.50801125280162,1.39269530428806,1.55971269695296,0,0,0,0,0.342745537829186,0,0.407302655690628,0.193952487167626,0.0701358198903186,4.61626721007078,15.6466756858378,18.6828486131236,14.3140710149289,0.889357881261447,0,0,0,0,0,0,0,0,0.274561413188081,1.43768206527355,0,0.936113019343682,0,0,0,0.739012760666419,0,0,0.169745085775188,0.234690248288502,0.167506257441816,0,0.195133647857799,0.630540576424764,0,0.318909537314974,0.163863314715738,0.345369963731791,0.144649058581512,0,0,0.491764273019036,4.41498794087572,7.06422595946285,10.3146284201139,0.163934945376675,1.26235463602186,0.94652465824877,0.780877488593277,3.66219776145758,4.77937595905104,6.90675889655422,9.05844898524264,2.83367491172426,1.46127928955656,4.34816555741176,12.8528526568723,0.709700426041343,1.24645922567079,0.488660878060728,0.659880491890142,1.32745138339963,0.728341908464944,1.51161778482376,3.58349651536206,3.83892460745005,2.76691633149535,1.55056975900933,5.08947221268508,4.9909632973861,5.05658812697306,2.10837217149998,4.12542172992747,12.2558258071364,0,0.258717367565509,0.428674070063185,0,0.535106452806212,3.1264313914403,3.65357938937519,0,0,0.441056796109924,1.31909002353184,0,0.663442174209714,0.596861720015682,0.492422699235184,0.582961673259701,5.00648315428376,0,0.206386867963223,0,0,0.136694227721025,0,0,0,0,0.954670618015114,0,1.42323626988794,0.86404272657441,1.25452977608681,1.09181281873089,1.61837215661785,1.23980183588004,0.26175594198403,0.518459893167171,4.34937519160848,1.69107881605257,0,0,0.194451188344048,1.03327858782185,0,0.117357238645754,0.2604087696879,0,2.17425708743405,0.864090018773596,0.316011120628178,0,0.102710957164827,0,0.358053391334963,0.198681354781265,0.120195449519969,0.295379054349154,0.403865799792591,0.15241361331,0.100826185136841,0.292373642219257,0.192423683280659,0.584384510907845,2.0405734525369,0,0,0,0.772758376128762,0,0.36630324853453,0.428736758158132,0,9.60078132449013,8.28585425712918,8.59343270159095,4.29632955859219,7.53590771747707,7.55393897389701,9.45031500324528,7.20513925158753,6.79713613476307,4.14208249401456,0.31136204275253,0.798049746802062,0.341467211508268,2.18796045361465,2.09613162627982,0.367687016900028,2.00022055021454,2.26638562962784,3.20919209591815,1.51618327058278,1.01391719956096,1.13175804831646,1.03005658216871,1.79270426733634,1.09127391015665,1.42888107384922,1.85414921511769,0.77163688185482,0.824171801606613,2.50238164228475,2.40008476669791,0.887379030796687,1.1921809497366,2.76158191601424,1.12931256498397,1.94613598150856,1.82927972872773,2.36762740294059,1.22223702461276,1.68342681497322,1.77952527186261,2.1670986122624,2.04615521584845,1.85924209423159,2.12197272079256,2.74791635731741,3.04111090979031,2.36358159453128,2.29545998482612,3.30887128679273,3.01428186306548
|short_description=p3@Rap1gap
|short_description=p3@Rap1gap
}}
}}

Latest revision as of 13:44, 26 September 2015

Short description:p3@Rap1gap
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Rap1gap_5end
Coexpression cluster:NA
Association with transcript: 0bp_to_ENSMUST00000047243, NM_001081155, uc008vjn.1, uc008vjo.1_5end
EntrezGene:Rap1gap
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Rap1gap

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G75.28
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.70
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A33.66
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.48
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.43
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.22
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.10
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C25.67
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.44
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.19
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.84
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C32.43
Mouse Granule cells, donor2.CNhs12357.11731-123E37.41
Mouse Granule cells, donor3.CNhs12108.11636-122C72.54
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C85.39
Mouse Microglia, donor2.CNhs12634.11736-123E814.22
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D51.24
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.95
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.21
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F118.85
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D517.45
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D23.06
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F22.78
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D63.68
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D32.20
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F38.30
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D76.45
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D42.24
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F42.65
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D85.21
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E45.58
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E510.13
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I69.78
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D66.48
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F611.39
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E12.80
Mouse Schwann, donor1.CNhs12507.11728-123D90.45
Mouse Schwann, donor2.CNhs12573.11746-123F90.45
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G321.16
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.86
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.98
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G619.15
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B61.14
accessory axillary lymph node, adult.CNhs10475.1063-29H90.26
adrenal gland, adult.CNhs10508.49-24D71.93
adrenal gland, embryo E14.CNhs11038.406-44C50.17
adrenal gland, embryo E16.CNhs11004.1254-43D60.30
adrenal gland, embryo E17.CNhs11043.1263-45I10.69
adrenal gland, embryo E18.CNhs11026.1262-18F51.21
adrenal gland, neonate N00.CNhs11191.1311-23C11.18
adrenal gland, neonate N25.CNhs11223.1377-27I30.88
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.29
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F52.43
bone (os femoris), neonate N16.CNhs11225.1525-43A60.88
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B25.86
cerebellum, neonate N30.CNhs11135.1395-42I25.24
colon, adult.CNhs10468.36-18H70.26
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A413.03
corpus striatum, adult.CNhs10487.19-21D810.98
corpus striatum, neonate N00.CNhs11226.630-43F17.41
cortex, adult.CNhs10473.12-14D57.82
cortex, neonate N30.CNhs11107.1392-42F29.46
diencephalon, adult.CNhs10482.20-12F211.22
diencephalon, neonate N30.CNhs11201.1388-42B215.74
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.41
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.50
epididymis, adult.CNhs10490.58-23B20.51
eyeball, adult.CNhs10484.31-12G41.05
eyeball, embryo E12.CNhs11016.345-16C60.00
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.18
eyeball, embryo E17.CNhs11023.1261-18D40.45
eyeball, neonate N00.CNhs11207.633-15C60.48
eyeball, neonate N01.CNhs11140.1532-43E71.79
eyeball, neonate N02.CNhs11205.1551-44G82.44
eyeball, neonate N16.CNhs11188.777-19A22.07
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.19
forelimb, embryo E13.CNhs10589.384-1E20.88
forelimb, embryo E14.CNhs10577.413-26A82.63
forelimb, embryo E15.CNhs11007.437-20E71.67
forelimb, embryo E17.CNhs10598.1517-43C43.48
forelimb, embryo E18.CNhs11008.1520-43B52.88
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.15
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.16
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.08
heart, neonate N20.CNhs11127.821-26I60.29
heart, neonate N25.CNhs11196.1351-25D30.22
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E89.25
hippocampus, neonate N00.CNhs11228.627-43G14.84
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.23
intestine, embryo E15.CNhs10602.976-16D80.26
intestine, embryo E16.CNhs10585.463-22H40.81
intestine, embryo E17.CNhs10582.482-18D30.67
intestine, embryo E18.CNhs10526.1289-20F70.57
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.33
intestine, neonate N06.CNhs11102.688-20B81.51
intestine, neonate N07.CNhs11095.720-20F21.39
intestine, neonate N10.CNhs11098.755-23A51.56
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.34
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.41
kidney, embryo E18.CNhs11001.1288-20C70.19
kidney, neonate N00.CNhs11214.646-21G70.07
kidney, neonate N10.CNhs11206.758-6D54.62
kidney, neonate N20.CNhs11113.832-19I115.65
kidney, neonate N25.CNhs11122.1353-25F318.68
kidney, neonate N30.CNhs11203.1385-42H114.31
liver, adult pregnant day01.CNhs10466.508-5B20.89
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.27
liver, neonate N06.CNhs11101.684-20A81.44
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.94
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.74
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.17
lung, embryo E16.CNhs10998.458-17B60.23
lung, embryo E17.CNhs10605.480-44A60.17
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.20
lung, neonate N06.CNhs11212.683-20E50.63
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.32
lung, neonate N20.CNhs11109.822-18A40.16
lung, neonate N25.CNhs11119.1359-25C70.35
lung, neonate N30.CNhs11133.1394-42H20.14
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.49
mammary gland, adult pregnant day19.CNhs10476.588-5H24.41
medulla oblongata, adult.CNhs10477.17-12C27.06
medulla oblongata, neonate N30.CNhs11200.1396-42A310.31
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.16
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C21.26
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.95
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.78
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E33.66
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D74.78
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D86.91
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D99.06
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D42.83
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D51.46
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D64.35
olfactory brain, adult.CNhs10489.18-22I912.85
ovary, adult.CNhs10507.91-2I70.71
ovary, embryo E18.CNhs11040.505-44H71.25
ovary, neonate N00.CNhs11217.1299-22I40.49
oviduct, adult pregnant day01.CNhs10500.988-6G60.66
pancreas, adult.CNhs10486.34-16E41.33
pancreas, embryo E14.CNhs11012.405-44F40.73
pancreas, embryo E15.CNhs11042.1556-45F21.51
pancreas, embryo E16.CNhs11003.460-26E53.58
pancreas, embryo E17.CNhs10599.1558-45G33.84
pancreas, embryo E18.CNhs10580.1535-43I72.77
pancreas, neonate N00.CNhs11105.645-26G91.55
pancreas, neonate N01.CNhs11138.1531-43D75.09
pancreas, neonate N02.CNhs11139.1539-43D84.99
pancreas, neonate N16.CNhs11136.787-43B65.06
pancreas, neonate N25.CNhs11094.1555-45E22.11
pancreas, neonate N30.CNhs11182.1548-44H54.13
pituitary gland, adult.CNhs10493.21-1G812.26
pituitary gland, embryo E12.CNhs11018.346-16E60.00
pituitary gland, embryo E13.CNhs11009.370-44C70.26
pituitary gland, embryo E14.CNhs11037.398-44A50.43
pituitary gland, embryo E15.CNhs10592.427-16B90.00
pituitary gland, embryo E16.CNhs11036.449-43F60.54
pituitary gland, embryo E17.CNhs11039.1265-44F53.13
pituitary gland, neonate N00.CNhs11190.1308-22E93.65
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.44
skin, adult.CNhs10492.30-1C31.32
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.66
skin, neonate N06.CNhs11097.693-20I50.60
skin, neonate N10.CNhs11108.762-6C40.49
small intestine, neonate N16.CNhs11114.790-21I10.58
spinal cord, adult.CNhs10505.24-13C95.01
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.21
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.14
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G81.42
stomach, embryo E16.CNhs11022.459-17D40.86
stomach, embryo E17.CNhs11006.1035-18D51.25
stomach, embryo E18.CNhs10999.1286-20C61.09
stomach, neonate N03.CNhs11193.1340-24B81.62
stomach, neonate N07.CNhs11210.718-18A91.24
stomach, neonate N25.CNhs11104.1355-25E40.26
stomach, neonate N30.CNhs11134.1386-42I10.52
submandibular gland, adult.CNhs10469.59-29C14.35
testis, adult.CNhs10504.57-7G51.69
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.19
testis, embryo E17.CNhs11029.486-18I51.03
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.12
testis, neonate N07.CNhs11222.726-26I40.26
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H32.17
testis, neonate N30.CNhs11130.1391-42E20.86
thymus, adult.CNhs10471.38-12B50.32
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.10
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.36
thymus, embryo E18.CNhs10595.1273-19G40.20
thymus, neonate N02.CNhs11181.1541-43F80.12
thymus, neonate N03.CNhs11137.2104-43C70.30
thymus, neonate N06.CNhs11197.681-26C40.40
thymus, neonate N07.CNhs11211.713-19D30.15
thymus, neonate N10.CNhs11194.748-24E40.10
thymus, neonate N20.CNhs11186.820-7A20.29
thymus, neonate N25.CNhs11125.1362-25G70.19
thymus, neonate N30.CNhs11132.1393-42G20.58
tongue, adult.CNhs10499.32-1B42.04
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.77
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.37
vagina, adult.CNhs10502.89-27D50.43
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A19.60
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A28.29
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A38.59
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D74.30
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A47.54
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A57.55
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A69.45
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A77.21
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A86.80
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A94.14
whole body, embryo E11.CNhs11014.324-5I80.31
whole body, embryo E12.CNhs10587.857-27C90.80
whole body, embryo E13.CNhs10512.372-23H20.34
whole body, embryo E14.5.CNhs10578.420-27D22.19
whole body, embryo E14.CNhs10519.395-14B12.10
whole body, embryo E16.CNhs10514.453-14F20.37
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G52.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G52.27
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G53.21
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.52
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.01
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.13
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.79
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.09
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G51.43
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.85
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.77
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G52.50
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G52.40
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.89
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.19
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G52.76
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.13
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.95
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.83
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G52.37
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.22
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.68
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.78
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G52.17
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G52.05
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.86
whole body, embryo E17.5.CNhs10513.490-9F92.12
whole body, embryo E17.CNhs10517.475-3I52.75
whole body, embryo E18.CNhs10516.493-3B33.04
whole body, neonate N00.CNhs10525.657-19C22.36
whole body, neonate N01.CNhs10576.659-23C62.30
whole body, neonate N06.CNhs10515.692-21D13.31
whole body, neonate N10.CNhs10518.761-6B43.01





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
neuron4.24e-1333
neuronal stem cell4.24e-1333
neuroblast4.24e-1333
electrically signaling cell4.24e-1333
ectodermal cell2.01e-1144
neurectodermal cell2.01e-1144
neural cell1.08e-1043
CNS neuron (sensu Vertebrata)1.30e-1023
neuroblast (sensu Vertebrata)1.30e-1023
electrically responsive cell1.92e-0939
electrically active cell1.92e-0939

Uber anatomy
Ontology termp-valuen
central nervous system3.22e-2773
nervous system7.92e-2675
ectoderm-derived structure3.66e-2395
ectoderm3.66e-2395
presumptive ectoderm3.66e-2395
regional part of nervous system7.76e-2154
neural tube1.10e-1952
neural rod1.10e-1952
future spinal cord1.10e-1952
neural keel1.10e-1952
neurectoderm8.20e-1764
neural plate8.20e-1764
presumptive neural plate8.20e-1764
brain2.64e-1647
future brain2.64e-1647
ecto-epithelium2.77e-1673
gray matter4.77e-1634
regional part of brain1.59e-1546
anterior neural tube5.41e-1340
brain grey matter1.72e-1229
regional part of telencephalon1.72e-1229
telencephalon1.72e-1229
regional part of forebrain3.02e-1239
forebrain3.02e-1239
future forebrain3.02e-1239
pre-chordal neural plate3.76e-1149
structure with developmental contribution from neural crest6.40e-1092
regional part of cerebral cortex1.24e-0817
occipital lobe4.27e-0810
visual cortex4.27e-0810
neocortex4.27e-0810
cerebral cortex7.48e-0821
cerebral hemisphere7.48e-0821
pallium7.48e-0821
posterior neural tube9.40e-0812
chordal neural plate9.40e-0812
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr4:137237578..137237634,%2B&oldid=4256373"