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FFCP PHASE1:Mm9::chr9:35366107..35366133,-: Difference between revisions

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{{FFCP
{{FFCP
|id=chr9:35366107..35366133,-
|DHSsupport=NA
|short_description=p2@Ddx25
|DPIdataset=NA
|description=CAGE_peak_2_at_Ddx25_5end
|association_with_transcript=-52bp_to_ENSMUST00000034612,NM_013932,uc012gqi.1_5end
|EntrezGene=30959
|EntrezGene=30959
|HGNC=
|HGNC=
|MCL_coexpression_id=1
|TSSclassifier=NA
|UniProt=Q9QY15
|UniProt=Q9QY15
|association_with_transcript=-52bp_to_ENSMUST00000034612,NM_013932,uc012gqi.1_5end
|cluster_id=chr9:35366107..35366133,-
|description=CAGE_peak_2_at_Ddx25_5end
|id=chr9:35366107..35366133,-
|ontology_enrichment_celltype=CL:0000117!6.52e-14!23;CL:0000337!6.52e-14!23;CL:0000540!9.54e-14!33;CL:0000047!9.54e-14!33;CL:0000031!9.54e-14!33;CL:0000404!9.54e-14!33;CL:0000221!4.91e-10!44;CL:0000133!4.91e-10!44;CL:0002319!6.94e-10!43;CL:0000393!1.41e-09!39;CL:0000211!1.41e-09!39
|ontology_enrichment_celltype_v019_2=CL:0000117,3.95e-17,23;CL:0000337,3.95e-17,23;CL:0000540,1.07e-13,33;CL:0000047,1.07e-13,33;CL:0000031,1.07e-13,33;CL:0000404,1.07e-13,33;CL:0000393,6.32e-10,39;CL:0000211,6.32e-10,39;CL:0000221,7.03e-09,44;CL:0000133,7.03e-09,44;CL:0002319,1.09e-08,43
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001017!8.80e-28!73;UBERON:0005743!8.80e-28!73;UBERON:0000073!2.90e-27!75;UBERON:0001016!2.90e-27!75;UBERON:0002346!5.68e-26!71;UBERON:0003075!5.68e-26!71;UBERON:0007284!5.68e-26!71;UBERON:0001049!2.16e-24!52;UBERON:0005068!2.16e-24!52;UBERON:0006241!2.16e-24!52;UBERON:0007135!2.16e-24!52;UBERON:0004121!1.16e-23!102;UBERON:0000924!1.16e-23!102;UBERON:0006601!1.16e-23!102;UBERON:0000955!1.66e-23!50;UBERON:0006238!1.66e-23!50;UBERON:0002616!7.26e-23!49;UBERON:0000033!4.77e-22!63;UBERON:0003080!6.66e-21!40;UBERON:0003056!7.51e-21!49;UBERON:0002780!3.57e-20!39;UBERON:0001890!3.57e-20!39;UBERON:0006240!3.57e-20!39;UBERON:0002020!4.61e-20!34;UBERON:0002791!1.87e-17!29;UBERON:0003528!1.87e-17!29;UBERON:0001893!1.87e-17!29;UBERON:0000956!1.44e-12!21;UBERON:0001869!1.44e-12!21;UBERON:0000203!1.44e-12!21;UBERON:0000153!1.64e-11!94;UBERON:0007811!6.09e-11!86;UBERON:0002619!3.44e-10!17;UBERON:0002021!3.61e-08!10;UBERON:0000411!3.61e-08!10;UBERON:0001950!3.61e-08!10
|ontology_enrichment_uberon_v019_2=UBERON:0000073,6.02e-31,54;UBERON:0001017,7.27e-30,73;UBERON:0001049,2.61e-29,52;UBERON:0005068,2.61e-29,52;UBERON:0006241,2.61e-29,52;UBERON:0007135,2.61e-29,52;UBERON:0001016,2.19e-28,75;UBERON:0002346,8.09e-28,64;UBERON:0003075,8.09e-28,64;UBERON:0007284,8.09e-28,64;UBERON:0000955,8.56e-26,47;UBERON:0006238,8.56e-26,47;UBERON:0002616,5.24e-25,46;UBERON:0003080,3.77e-24,40;UBERON:0002020,7.27e-24,34;UBERON:0002780,3.04e-23,39;UBERON:0001890,3.04e-23,39;UBERON:0006240,3.04e-23,39;UBERON:0010371,2.02e-22,73;UBERON:0004121,1.23e-21,95;UBERON:0000924,1.23e-21,95;UBERON:0006601,1.23e-21,95;UBERON:0003056,2.23e-21,49;UBERON:0003528,1.41e-20,29;UBERON:0002791,1.41e-20,29;UBERON:0001893,1.41e-20,29;UBERON:0010314,7.08e-18,92;UBERON:0000956,1.90e-14,21;UBERON:0001869,1.90e-14,21;UBERON:0000203,1.90e-14,21;UBERON:0002619,1.79e-11,17;UBERON:0002021,6.83e-10,10;UBERON:0000411,6.83e-10,10;UBERON:0001950,6.83e-10,10;UBERON:0002420,2.56e-07,8;UBERON:0007245,2.56e-07,8;UBERON:0010009,2.56e-07,8;UBERON:0010011,2.56e-07,8;UBERON:0000454,2.56e-07,8
|phase1_expression=0.960893082628764,0,0,0,0,0,0,0,0,0,0,0.0797721589953364,0,0,0,0,0,0,0,0,4.59233766815777,0.0992909512008853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219686182734472,0.388859798148567,0.139986421625363,1.43752564364972,0,0,0,0.514518872071894,0,0,7.89034197352431,10.0508286061686,7.60597684207415,0,0,0,0,0,0.299600110518405,0,13.1685807631767,14.850653216486,13.8814474491912,7.42692559449889,7.50953039235486,18.3736198822431,14.8560480078266,16.5459381589804,12.1127469099328,13.6625451751151,17.2039317246993,6.19865552331911,6.12967212136145,5.2091337055676,18.7052609330925,19.6966913511088,18.0301932376636,7.95497180778903,9.5389026135399,9.87917062874093,0.075726193333184,0.755715601067855,0,0,0,0,0,0,1.12355536105401,0,0,0,1.40843419776681,0,0,0,0,0,0,0.68510327831436,0,1.1875371125186,1.73485326766136,1.21786191324856,1.61430848079241,0.753613202763113,0.705532242814229,0.753999547978053,0.247194967734374,0,0,0.161766849947409,0,0.484875253135222,0,4.68449275218475,5.44561437714983,0,0.11981512450592,0,0,19.3229924832221,15.5550204958333,31.6648967324418,19.468323861535,15.3429274398198,12.4672826735736,15.412919991437,0.81471491080253,0,0.505445516867349,0.841767423545896,1.30120442962704,0.689706313300419,1.44049703844279,0.753524089178575,0.544291993210623,1.15302348256365,1.12442069471675,3.88055056108524,0.646703978798527,1.70195472151037,1.23165786914764,1.97276159184817,1.11218899690239,1.39300866608867,0.823128545631774,1.19420560091096,0,0,0,1.44988040774851,1.64168241986767,0.900310307305074,1.18372367792605,0.196764231747404,0.462801338662135,0.232533944750408,0.268273401399619,0.467061369468678,0,0,0,0,0,0,23.131894342054,15.2298826321341,0,0.264450566663544,2.13288250535234,1.39342003116263,1.15980715189884,0,0,0.190225626112559,0,0.164698954724011,0,0,0.19496408711912,0,0.216138049874694,0,1.32767530667157,0.571242563048644,0,0.610953983535943,0.581857461502877,0.420814919341911,0.316182685621286,0,0,0,0,0.333690211432188,0.589676985339609,0.224862112384854,0.405720242777006,0,0.763877555344259,0.287696137450811,0.162135226775035,0,0,0,0.936113019343682,0,0,0,0,1.32643988239339,0.814824882210129,0.509235257325564,0.469380496577004,0.167506257441816,0.238043640886014,0,0,0,0,0,0,0,0,0,0,0.275936746304732,13.8073507389501,15.8235776899474,0,0,2.2085575359138,1.17131623288992,2.80050417052639,0.477937595905104,0.891194696329576,0.566153061577665,4.04810701674894,1.16902343164525,0.395287777946524,14.1381379225595,0,1.95872164033981,1.30309567482861,0.329940245945071,0,1.69946445308487,0.604647113929502,0.565815239267694,0.590603785761546,0.922305443831782,0.775284879504663,0.363533729477506,0,0.316036757935816,0,0,5.7874732978144,0.720244376125241,1.03486947026204,1.50035924522115,3.90148514013002,1.96205699362278,2.63278432963394,2.74018454203139,0.23467170806371,0,0.441056796109924,0,0.322928853391811,0.0603129249281559,0,0,0,14.4631735568198,0,0.412773735926445,0.370389054739423,0,0,0,0,0,0,0,3.00519193902079,0.609958401380546,0.108005340821801,0.209088296014469,0.655087691238533,0.269728692769641,0.330613822901344,0,0.129614973291793,0,13.5286305284206,1.49516546043979,1.98550188548517,3.88902376688095,3.48731523389874,2.53434188236167,1.05621514781179,0.39061315453185,2.51662426621706,5.07326653734613,8.06484017522023,0,1.41907650703115,0,0.25984164595559,0.358053391334963,0.198681354781265,0,0,0.100966449948148,0,0,0.0974578807397524,0,0.233753804363138,0,1.10992976687032,0.269141569828427,1.00730769818447,0,0,0,0,0,16.3778034358949,20.714635642823,13.1765968091061,22.3409137046794,20.5524755931193,19.6402413321322,19.5756525067224,16.2115633160719,21.7508356312418,18.1216109113137,1.97195960409936,0.798049746802062,2.56100408631201,2.43106717068294,4.40187641518763,4.04455718590031,3.77819437262746,2.06035057238894,0.64183841918363,2.27427490587418,3.54871019846336,1.50901073108861,1.96647165686753,1.98477972455095,1.7230640686684,0.476293691283074,1.50649623728312,1.92909220463705,2.47251540481984,1.17759136107518,2.05721551431249,3.19456451086807,2.14592570952589,3.0522747492789,2.1645157495526,2.11536519729191,3.47563148458268,1.8414879800649,2.44447404922551,3.92799590160417,2.25406534435931,3.05363895364247,2.86461730218783,2.01417893541756,2.12197272079256,4.99621155875892,2.10538447600868,1.50409737833809,0.57386499620653,1.10295709559758,1.39120701372253
|phase1_expression=0.960893082628764,0,0,0,0,0,0,0,0,0,0,0.0797721589953364,0,0,0,0,0,0,0,0,4.59233766815777,0.0992909512008853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219686182734472,0.388859798148567,0.139986421625363,1.43752564364972,0,0,0,0.514518872071894,0,0,7.89034197352431,10.0508286061686,7.60597684207415,0,0,0,0,0,0.299600110518405,0,13.1685807631767,14.850653216486,13.8814474491912,7.42692559449889,7.50953039235486,18.3736198822431,14.8560480078266,16.5459381589804,12.1127469099328,13.6625451751151,17.2039317246993,6.19865552331911,6.12967212136145,5.2091337055676,18.7052609330925,19.6966913511088,18.0301932376636,7.95497180778903,9.5389026135399,9.87917062874093,0.075726193333184,0.755715601067855,0,0,0,0,0,0,1.12355536105401,0,0,0,1.40843419776681,0,0,0,0,0,0,0.68510327831436,0,1.1875371125186,1.73485326766136,1.21786191324856,1.61430848079241,0.753613202763113,0.705532242814229,0.753999547978053,0.247194967734374,0,0,0.161766849947409,0,0.484875253135222,0,4.68449275218475,5.44561437714983,0,0.11981512450592,0,0,19.3229924832221,15.5550204958333,31.6648967324418,19.468323861535,15.3429274398198,12.4672826735736,15.412919991437,0.81471491080253,0,0.505445516867349,0.841767423545896,1.30120442962704,0.689706313300419,1.44049703844279,0.753524089178575,0.544291993210623,1.15302348256365,1.12442069471675,3.88055056108524,0.646703978798527,1.70195472151037,1.23165786914764,1.97276159184817,1.11218899690239,1.39300866608867,0.823128545631774,1.19420560091096,0,0,0,1.44988040774851,1.64168241986767,0.900310307305074,1.18372367792605,0.196764231747404,0.462801338662135,0.232533944750408,0.268273401399619,0.467061369468678,0,0,0,0,0,0,23.131894342054,15.2298826321341,0,0.264450566663544,2.13288250535234,1.39342003116263,1.15980715189884,0,0,0.190225626112559,0,0.164698954724011,0,0,0.19496408711912,0,0.216138049874694,0,1.32767530667157,0.571242563048644,0,0.610953983535943,0.581857461502877,0.420814919341911,0.316182685621286,0,0,0,0,0.333690211432188,0.589676985339609,0.224862112384854,0.405720242777006,0,0.763877555344259,0.287696137450811,0.162135226775035,0,0,0,0.936113019343682,0,0,0,0,1.32643988239339,0.814824882210129,0.509235257325564,0.469380496577004,0.167506257441816,0.238043640886014,0,0,0,0,0,0,0,0,0,0,0.275936746304732,13.8073507389501,15.8235776899474,0,0,2.2085575359138,1.17131623288992,2.80050417052639,0.477937595905104,0.891194696329576,0.566153061577665,4.04810701674894,1.16902343164525,0.395287777946524,14.1381379225595,0,1.95872164033981,1.30309567482861,0.329940245945071,0,1.69946445308487,0.604647113929502,0.565815239267694,0.590603785761546,0.922305443831782,0.775284879504663,0.363533729477506,0,0.316036757935816,0,0,5.7874732978144,0.720244376125241,1.03486947026204,1.50035924522115,3.90148514013002,1.96205699362278,2.63278432963394,2.74018454203139,0.23467170806371,0,0.441056796109924,0,0.322928853391811,0.0603129249281559,0,0,0,14.4631735568198,0,0.412773735926445,0.370389054739423,0,0,0,0,0,0,0,3.00519193902079,0.609958401380546,0.108005340821801,0.209088296014469,0.655087691238533,0.269728692769641,0.330613822901344,0,0.129614973291793,0,13.5286305284206,1.49516546043979,1.98550188548517,3.88902376688095,3.48731523389874,2.53434188236167,1.05621514781179,0.39061315453185,2.51662426621706,5.07326653734613,8.06484017522023,0,1.41907650703115,0,0.25984164595559,0.358053391334963,0.198681354781265,0,0,0.100966449948148,0,0,0.0974578807397524,0,0.233753804363138,0,1.10992976687032,0.269141569828427,1.00730769818447,0,0,0,0,0,16.3778034358949,20.714635642823,13.1765968091061,22.3409137046794,20.5524755931193,19.6402413321322,19.5756525067224,16.2115633160719,21.7508356312418,18.1216109113137,1.97195960409936,0.798049746802062,2.56100408631201,2.43106717068294,4.40187641518763,4.04455718590031,3.77819437262746,2.06035057238894,0.64183841918363,2.27427490587418,3.54871019846336,1.50901073108861,1.96647165686753,1.98477972455095,1.7230640686684,0.476293691283074,1.50649623728312,1.92909220463705,2.47251540481984,1.17759136107518,2.05721551431249,3.19456451086807,2.14592570952589,3.0522747492789,2.1645157495526,2.11536519729191,3.47563148458268,1.8414879800649,2.44447404922551,3.92799590160417,2.25406534435931,3.05363895364247,2.86461730218783,2.01417893541756,2.12197272079256,4.99621155875892,2.10538447600868,1.50409737833809,0.57386499620653,1.10295709559758,1.39120701372253
|short_description=p2@Ddx25
}}
}}

Latest revision as of 14:15, 26 September 2015

Short description:p2@Ddx25
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Ddx25_5end
Coexpression cluster:MCL_coexpression_mm9:1
Association with transcript: -52bp_to_ENSMUST00000034612, NM_013932, uc012gqi.1_5end
EntrezGene:Ddx25
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Ddx25

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.96
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.08
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A34.59
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.10
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.22
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.39
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.14
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.51
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C37.89
Mouse Granule cells, donor2.CNhs12357.11731-123E310.05
Mouse Granule cells, donor3.CNhs12108.11636-122C77.61
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.30
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D513.17
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F514.85
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D913.88
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F17.43
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D57.51
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D218.37
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F214.86
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D616.55
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D312.11
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F313.66
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D717.20
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D46.20
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F46.13
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D85.21
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E418.71
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E519.70
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I618.03
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D67.95
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F69.54
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E19.88
Mouse Schwann, donor1.CNhs12507.11728-123D90.08
Mouse Schwann, donor2.CNhs12573.11746-123F90.76
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A71.12
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G61.41
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.69
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D71.19
adrenal gland, embryo E14.CNhs11038.406-44C51.73
adrenal gland, embryo E16.CNhs11004.1254-43D61.22
adrenal gland, embryo E17.CNhs11043.1263-45I11.61
adrenal gland, embryo E18.CNhs11026.1262-18F50.75
adrenal gland, neonate N00.CNhs11191.1311-23C10.71
adrenal gland, neonate N25.CNhs11223.1377-27I30.75
amnion, adult pregnant day17.5.CNhs10488.583-22A80.25
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.16
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.48
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B24.68
cerebellum, neonate N30.CNhs11135.1395-42I25.45
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.12
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A419.32
corpus striatum, adult.CNhs10487.19-21D815.56
corpus striatum, neonate N00.CNhs11226.630-43F131.66
cortex, adult.CNhs10473.12-14D519.47
cortex, neonate N30.CNhs11107.1392-42F215.34
diencephalon, adult.CNhs10482.20-12F212.47
diencephalon, neonate N30.CNhs11201.1388-42B215.41
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.81
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.51
eyeball, adult.CNhs10484.31-12G40.84
eyeball, embryo E12.CNhs11016.345-16C61.30
eyeball, embryo E14.CNhs10521.399-16E20.69
eyeball, embryo E15.CNhs10593.426-16C91.44
eyeball, embryo E17.CNhs11023.1261-18D40.75
eyeball, neonate N00.CNhs11207.633-15C60.54
eyeball, neonate N01.CNhs11140.1532-43E71.15
eyeball, neonate N02.CNhs11205.1551-44G81.12
eyeball, neonate N16.CNhs11188.777-19A23.88
forelimb, embryo E11.CNhs10596.335-25E20.65
forelimb, embryo E12.CNhs10600.359-14H21.70
forelimb, embryo E13.CNhs10589.384-1E21.23
forelimb, embryo E14.CNhs10577.413-26A81.97
forelimb, embryo E15.CNhs11007.437-20E71.11
forelimb, embryo E17.CNhs10598.1517-43C41.39
forelimb, embryo E18.CNhs11008.1520-43B50.82
gonad, embryo E13.CNhs11044.1564-45I61.19
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E91.45
heart, embryo E12.CNhs11015.353-12F51.64
heart, embryo E13.CNhs11013.376-3I90.90
heart, embryo E14.CNhs10597.403-26D41.18
heart, embryo E15.CNhs11017.431-16C80.20
heart, embryo E16.CNhs11021.457-17C60.46
heart, embryo E17.CNhs11025.479-18E50.23
heart, embryo E18.CNhs11030.1283-20G30.27
heart, neonate N00.CNhs11213.639-21E30.47
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E823.13
hippocampus, neonate N00.CNhs11228.627-43G115.23
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.26
intestine, embryo E12.CNhs11019.1251-16I52.13
intestine, embryo E13.CNhs11010.381-16D51.39
intestine, embryo E15.CNhs10602.976-16D81.16
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.19
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.16
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.19
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.22
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I91.33
kidney, embryo E15.CNhs10997.434-16F80.57
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.61
kidney, embryo E18.CNhs11001.1288-20C70.58
kidney, neonate N00.CNhs11214.646-21G70.42
kidney, neonate N10.CNhs11206.758-6D50.32
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.33
liver, embryo E13.CNhs10524.378-3H60.59
liver, embryo E14.CNhs10594.409-16E10.22
liver, embryo E15.CNhs10520.433-16D70.41
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.76
liver, embryo E18.CNhs10579.499-43G40.29
liver, neonate N00.CNhs11117.641-24F40.16
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.94
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G21.33
lung, embryo E14.CNhs10604.404-26F80.81
lung, embryo E15.CNhs11020.432-17C50.51
lung, embryo E16.CNhs10998.458-17B60.47
lung, embryo E17.CNhs10605.480-44A60.17
lung, embryo E18.CNhs10583.1287-20I60.24
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.28
medulla oblongata, adult.CNhs10477.17-12C213.81
medulla oblongata, neonate N30.CNhs11200.1396-42A315.82
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E12.21
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E21.17
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E32.80
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.48
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.89
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.57
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D44.05
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D51.17
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.40
olfactory brain, adult.CNhs10489.18-22I914.14
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H71.96
ovary, neonate N00.CNhs11217.1299-22I41.30
oviduct, adult pregnant day01.CNhs10500.988-6G60.33
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F41.70
pancreas, embryo E15.CNhs11042.1556-45F20.60
pancreas, embryo E16.CNhs11003.460-26E50.57
pancreas, embryo E17.CNhs10599.1558-45G30.59
pancreas, embryo E18.CNhs10580.1535-43I70.92
pancreas, neonate N00.CNhs11105.645-26G90.78
pancreas, neonate N01.CNhs11138.1531-43D70.36
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G85.79
pituitary gland, embryo E12.CNhs11018.346-16E60.72
pituitary gland, embryo E13.CNhs11009.370-44C71.03
pituitary gland, embryo E14.CNhs11037.398-44A51.50
pituitary gland, embryo E15.CNhs10592.427-16B93.90
pituitary gland, embryo E16.CNhs11036.449-43F61.96
pituitary gland, embryo E17.CNhs11039.1265-44F52.63
pituitary gland, neonate N00.CNhs11190.1308-22E92.74
placenta, adult pregnant day10.CNhs10472.539-13I70.23
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.44
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.32
skin, neonate N03.CNhs11215.662-22H30.06
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C914.46
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.41
spleen, embryo E18.CNhs11011.1271-21F20.37
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E33.01
stomach, embryo E15.CNhs10603.1252-16G80.61
stomach, embryo E16.CNhs11022.459-17D40.11
stomach, embryo E17.CNhs11006.1035-18D50.21
stomach, embryo E18.CNhs10999.1286-20C60.66
stomach, neonate N03.CNhs11193.1340-24B80.27
stomach, neonate N07.CNhs11210.718-18A90.33
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.13
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G513.53
testis, embryo E13.CNhs11031.389-23F51.50
testis, embryo E15.CNhs11034.443-27C51.99
testis, embryo E16.CNhs11033.470-26G53.89
testis, embryo E17.CNhs11029.486-18I53.49
testis, embryo E18.CNhs11027.503-18G52.53
testis, neonate N00.CNhs11189.1300-22B71.06
testis, neonate N07.CNhs11222.726-26I40.39
testis, neonate N10.CNhs11204.763-44D92.52
testis, neonate N20.CNhs11110.839-18H35.07
testis, neonate N30.CNhs11130.1391-42E28.06
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I41.42
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.26
thymus, embryo E17.CNhs10581.478-18C10.36
thymus, embryo E18.CNhs10595.1273-19G40.20
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.10
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.10
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.23
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H31.11
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.27
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G51.01
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A116.38
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A220.71
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A313.18
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D722.34
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A420.55
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A519.64
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A619.58
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A716.21
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A821.75
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A918.12
whole body, embryo E11.CNhs11014.324-5I81.97
whole body, embryo E12.CNhs10587.857-27C90.80
whole body, embryo E13.CNhs10512.372-23H22.56
whole body, embryo E14.5.CNhs10578.420-27D22.43
whole body, embryo E14.CNhs10519.395-14B14.40
whole body, embryo E16.CNhs10514.453-14F24.04
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G53.78
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G52.06
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.64
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G52.27
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G53.55
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.51
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.97
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.98
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.72
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.51
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.93
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G52.47
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.18
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G52.06
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G53.19
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G52.15
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G53.05
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G52.16
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G52.12
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G53.48
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.84
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G52.44
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G53.93
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G52.25
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G53.05
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G52.86
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G52.01
whole body, embryo E17.5.CNhs10513.490-9F92.12
whole body, embryo E17.CNhs10517.475-3I55.00
whole body, embryo E18.CNhs10516.493-3B32.11
whole body, neonate N00.CNhs10525.657-19C21.50
whole body, neonate N01.CNhs10576.659-23C60.57
whole body, neonate N06.CNhs10515.692-21D11.10
whole body, neonate N10.CNhs10518.761-6B41.39





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)3.95e-1723
neuroblast (sensu Vertebrata)3.95e-1723
neuron1.07e-1333
neuronal stem cell1.07e-1333
neuroblast1.07e-1333
electrically signaling cell1.07e-1333
electrically responsive cell6.32e-1039
electrically active cell6.32e-1039
ectodermal cell7.03e-0944
neurectodermal cell7.03e-0944
neural cell1.09e-0843

Uber anatomy
Ontology termp-valuen
regional part of nervous system6.02e-3154
central nervous system7.27e-3073
neural tube2.61e-2952
neural rod2.61e-2952
future spinal cord2.61e-2952
neural keel2.61e-2952
nervous system2.19e-2875
neurectoderm8.09e-2864
neural plate8.09e-2864
presumptive neural plate8.09e-2864
brain8.56e-2647
future brain8.56e-2647
regional part of brain5.24e-2546
anterior neural tube3.77e-2440
gray matter7.27e-2434
regional part of forebrain3.04e-2339
forebrain3.04e-2339
future forebrain3.04e-2339
ecto-epithelium2.02e-2273
ectoderm-derived structure1.23e-2195
ectoderm1.23e-2195
presumptive ectoderm1.23e-2195
pre-chordal neural plate2.23e-2149
brain grey matter1.41e-2029
regional part of telencephalon1.41e-2029
telencephalon1.41e-2029
structure with developmental contribution from neural crest7.08e-1892
cerebral cortex1.90e-1421
cerebral hemisphere1.90e-1421
pallium1.90e-1421
regional part of cerebral cortex1.79e-1117
occipital lobe6.83e-1010
visual cortex6.83e-1010
neocortex6.83e-1010
basal ganglion2.56e-078
nuclear complex of neuraxis2.56e-078
aggregate regional part of brain2.56e-078
collection of basal ganglia2.56e-078
cerebral subcortex2.56e-078
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