Personal tools

FFCP PHASE1:Mm9::chr6:122436142..122436198,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
(5 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=108653
|EntrezGene=108653
|HGNC=
|HGNC=
|MCL_coexpression_id=2275
|TSSclassifier=NA
|UniProt=Q80WS1
|UniProt=Q80WS1
|association_with_transcript=124bp_to_NM_027664,uc009dpg.1_5end
|association_with_transcript=124bp_to_NM_027664,uc009dpg.1_5end
|cluster_id=chr6:122436142..122436198,-
|description=CAGE_peak_4_at_Rimklb_5end
|description=CAGE_peak_4_at_Rimklb_5end
|id=chr6:122436142..122436198,-
|id=chr6:122436142..122436198,-
|ontology_enrichment_celltype=CL:0000117!2.36e-12!23;CL:0000337!2.36e-12!23;CL:0000540!2.32e-11!33;CL:0000047!2.32e-11!33;CL:0000031!2.32e-11!33;CL:0000404!2.32e-11!33;CL:0000221!2.03e-10!44;CL:0000133!2.03e-10!44;CL:0002319!7.37e-10!43;CL:0000393!1.28e-07!39;CL:0000211!1.28e-07!39
|ontology_enrichment_celltype=CL:0000117!2.36e-12!23;CL:0000337!2.36e-12!23;CL:0000540!2.32e-11!33;CL:0000047!2.32e-11!33;CL:0000031!2.32e-11!33;CL:0000404!2.32e-11!33;CL:0000221!2.03e-10!44;CL:0000133!2.03e-10!44;CL:0002319!7.37e-10!43;CL:0000393!1.28e-07!39;CL:0000211!1.28e-07!39
|ontology_enrichment_celltype_v019_2=CL:0000117,3.30e-16,23;CL:0000337,3.30e-16,23;CL:0000540,6.73e-12,33;CL:0000047,6.73e-12,33;CL:0000031,6.73e-12,33;CL:0000404,6.73e-12,33;CL:0000221,2.57e-10,44;CL:0000133,2.57e-10,44;CL:0002319,1.63e-09,43;CL:0000393,3.91e-09,39;CL:0000211,3.91e-09,39;CL:0002609,2.44e-07,6
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002346!2.75e-18!71;UBERON:0003075!2.75e-18!71;UBERON:0007284!2.75e-18!71;UBERON:0001017!9.60e-17!73;UBERON:0005743!9.60e-17!73;UBERON:0000033!1.48e-16!63;UBERON:0000073!1.74e-16!75;UBERON:0001016!1.74e-16!75;UBERON:0003056!3.41e-16!49;UBERON:0004121!9.59e-16!102;UBERON:0000924!9.59e-16!102;UBERON:0006601!9.59e-16!102;UBERON:0001049!1.13e-15!52;UBERON:0005068!1.13e-15!52;UBERON:0006241!1.13e-15!52;UBERON:0007135!1.13e-15!52;UBERON:0002020!3.75e-13!34;UBERON:0002616!5.24e-12!49;UBERON:0002780!2.05e-11!39;UBERON:0001890!2.05e-11!39;UBERON:0006240!2.05e-11!39;UBERON:0000955!2.07e-11!50;UBERON:0006238!2.07e-11!50;UBERON:0003080!2.25e-11!40;UBERON:0002791!7.03e-10!29;UBERON:0003528!7.03e-10!29;UBERON:0001893!7.03e-10!29;UBERON:0000153!6.24e-09!94;UBERON:0007811!2.96e-08!86;UBERON:0000020!4.31e-07!12;UBERON:0001032!4.31e-07!12;UBERON:0004456!4.31e-07!12
|ontology_enrichment_uberon_v019_2=UBERON:0002346,7.40e-18,64;UBERON:0003075,7.40e-18,64;UBERON:0007284,7.40e-18,64;UBERON:0010371,1.23e-16,73;UBERON:0004121,5.60e-15,95;UBERON:0000924,5.60e-15,95;UBERON:0006601,5.60e-15,95;UBERON:0003056,2.98e-13,49;UBERON:0002020,3.38e-13,34;UBERON:0001017,4.98e-12,73;UBERON:0001049,9.67e-12,52;UBERON:0005068,9.67e-12,52;UBERON:0006241,9.67e-12,52;UBERON:0007135,9.67e-12,52;UBERON:0001016,1.93e-11,75;UBERON:0000073,5.72e-11,54;UBERON:0010314,7.38e-11,92;UBERON:0000020,9.27e-10,12;UBERON:0001032,9.27e-10,12;UBERON:0004456,9.27e-10,12;UBERON:0000970,7.96e-09,9;UBERON:0000019,7.96e-09,9;UBERON:0000047,7.96e-09,9;UBERON:0010312,7.96e-09,9;UBERON:0004088,7.96e-09,9;UBERON:0002104,7.96e-09,9;UBERON:0001456,7.96e-09,9;UBERON:0003072,7.96e-09,9;UBERON:0004128,7.96e-09,9;UBERON:0003071,7.96e-09,9;UBERON:0000033,8.40e-09,13;UBERON:0005085,8.40e-09,13;UBERON:0003528,1.89e-08,29;UBERON:0002791,1.89e-08,29;UBERON:0001893,1.89e-08,29;UBERON:0002240,2.17e-08,6;UBERON:0005174,2.17e-08,6;UBERON:0001137,2.17e-08,6;UBERON:0002780,9.45e-08,39;UBERON:0001890,9.45e-08,39;UBERON:0006240,9.45e-08,39;UBERON:0001948,1.09e-07,5;UBERON:0002315,1.09e-07,5;UBERON:0000369,1.67e-07,5;UBERON:0002435,1.67e-07,5;UBERON:0000204,1.67e-07,5;UBERON:0010082,1.67e-07,5;UBERON:0003080,2.00e-07,40;UBERON:0002616,3.15e-07,46;UBERON:0000955,5.92e-07,47;UBERON:0006238,5.92e-07,47;UBERON:0001444,7.11e-07,11
|phase1_expression=2.5623815536767,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.7008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.09012578190223,0.219686182734472,0.194429899074283,0,0,0,0,0,0,0,0,9.3065571995415,9.52183762689659,10.1413024560989,0,0,0,0,0,0.898800331555214,1.53687322128622,1.65903379693564,2.56511282830212,3.36519938162211,4.85606673486466,4.8591079009355,3.42974237801871,3.64212789869298,1.83843757322004,0,0.766124028511126,1.22885226604995,11.7378796079873,11.2529801630964,12.5019208933622,0.837548997004143,0.56276261003168,0.61119299110724,4.41942878210502,5.55249555116501,5.96478226640962,0.151452386666368,0.151143120213571,0,0,0,0,0,0,0.140444420131752,0,0,0,4.22530259330042,0,0,0,0,0,0,0,0,0,0.173485326766136,0.913396434936424,0,0.150722640552623,0.23517741427141,0,0,0.144599356919912,0,0,0,0,0,0.878342391034642,0.209446706813455,0,0,0,0,0.299581278809645,1.83000241127451,2.76439574648302,0.521472960576829,0.255715457330331,0.41557608911912,0.648965052271031,0.916554274652847,0.124406970610093,1.0108910337347,0.420883711772948,2.47228841629137,4.59804208866946,3.60124259610698,4.52114453507145,5.10273743634959,4.61209393025459,3.5606655332697,1.55222022443409,2.58681591519411,3.02569728268511,2.11141348996739,1.31517439456545,0.556094498451196,0,0,0.796137067273973,0,0,0,0.414251545071004,0.469052119962192,0.36012412292203,0.23674473558521,0.196764231747404,0.462801338662135,0,0,0,0.16455984991348,0,0,0,0,0.134206418760372,0.210289948564127,3.91037527041281,0,0,1.06644125267617,2.09013004674395,0.128867461322093,0.403367049246685,0.22237804384487,0,0,0.164698954724011,0,0,0,0,0.216138049874694,0,0.948339504765408,1.02823661348756,1.1270773567308,0.610953983535943,0.387904974335251,0.561086559122548,0.189709611372772,0,0,0,0,0.500535317148282,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.70542270593436,0.651859905768103,0.678980343100753,0.234690248288502,0.502518772325447,0,0,0.315270288212382,0,0.159454768657487,0,0,0,0,0,0,0,0.963303539926752,1.40654023910644,0,0,0.315508219416257,0,1.07711698866399,0.238968797952552,0.445597348164788,0.566153061577665,0.809621403349789,0.292255857911312,0,0,0.99358059645788,0.890328018336276,0.325773918707152,0.164970122972535,0,1.21390318077491,0.906970670894253,0,0,0,0,0,0,0,0,0,0.340439605753788,4.86164953884538,1.16422815404479,1.71469628025274,0.354680467284547,0.356737635204141,0.329098041204242,0.304464949114599,0.23467170806371,0,7.27743713581374,0,0,0,0,0,0,1.48340241608408,0,0,0.185194527369712,0,0,0,0,0,0,0,2.68885594543965,1.01659733563424,0.540026704109006,0,0,0.269728692769641,0.165306911450672,0,0,0,3.94585057078933,1.19613236835183,0.66183396182839,0.777804753376191,0.258319646955462,0.506868376472335,0.352071715937262,0.5208175393758,2.9360616439199,9.42178071221424,7.20075015644664,0,0.405450430580328,0.102710957164827,0.25984164595559,0.179026695667481,0,0,0,0,0.15241361331,0,0,0,0.116876902181569,0.226730383615211,0,0.0897138566094757,0,0,0,0,0,0.501572104035363,3.3885110557024,0.920650473014354,1.14579102687879,1.20297227640581,1.37016503954128,0,0.675022500231806,0.45032120322422,0.453142408984205,1.03552062350364,2.59468368960442,3.59122386060928,2.56100408631201,1.21553358534147,0.419226325255965,0.551530525350042,0.666740183404846,0.618105171716683,1.92551525755089,1.26348605881899,0.760437899670719,0.754505365544305,0.842773567228942,0.768301828858431,0.861532034334199,0.952587382566147,1.62238056322798,0.77163688185482,0.824171801606613,0.588795680537589,1.37147700954166,0.70990322463735,0.715308569841963,0.872078499793971,0.564656282491984,0.846146078916765,0.548783918618318,0.526139422875686,1.49384525230448,1.12228454331548,0.355905054372522,1.47756723563345,0.409231043169689,1.08455788830176,0.192906610981141,1.99848462350357,1.16965804222704,0.859484216193193,0.57386499620653,0.220591419119515,0
|phase1_expression=2.5623815536767,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.7008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.09012578190223,0.219686182734472,0.194429899074283,0,0,0,0,0,0,0,0,9.3065571995415,9.52183762689659,10.1413024560989,0,0,0,0,0,0.898800331555214,1.53687322128622,1.65903379693564,2.56511282830212,3.36519938162211,4.85606673486466,4.8591079009355,3.42974237801871,3.64212789869298,1.83843757322004,0,0.766124028511126,1.22885226604995,11.7378796079873,11.2529801630964,12.5019208933622,0.837548997004143,0.56276261003168,0.61119299110724,4.41942878210502,5.55249555116501,5.96478226640962,0.151452386666368,0.151143120213571,0,0,0,0,0,0,0.140444420131752,0,0,0,4.22530259330042,0,0,0,0,0,0,0,0,0,0.173485326766136,0.913396434936424,0,0.150722640552623,0.23517741427141,0,0,0.144599356919912,0,0,0,0,0,0.878342391034642,0.209446706813455,0,0,0,0,0.299581278809645,1.83000241127451,2.76439574648302,0.521472960576829,0.255715457330331,0.41557608911912,0.648965052271031,0.916554274652847,0.124406970610093,1.0108910337347,0.420883711772948,2.47228841629137,4.59804208866946,3.60124259610698,4.52114453507145,5.10273743634959,4.61209393025459,3.5606655332697,1.55222022443409,2.58681591519411,3.02569728268511,2.11141348996739,1.31517439456545,0.556094498451196,0,0,0.796137067273973,0,0,0,0.414251545071004,0.469052119962192,0.36012412292203,0.23674473558521,0.196764231747404,0.462801338662135,0,0,0,0.16455984991348,0,0,0,0,0.134206418760372,0.210289948564127,3.91037527041281,0,0,1.06644125267617,2.09013004674395,0.128867461322093,0.403367049246685,0.22237804384487,0,0,0.164698954724011,0,0,0,0,0.216138049874694,0,0.948339504765408,1.02823661348756,1.1270773567308,0.610953983535943,0.387904974335251,0.561086559122548,0.189709611372772,0,0,0,0,0.500535317148282,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.70542270593436,0.651859905768103,0.678980343100753,0.234690248288502,0.502518772325447,0,0,0.315270288212382,0,0.159454768657487,0,0,0,0,0,0,0,0.963303539926752,1.40654023910644,0,0,0.315508219416257,0,1.07711698866399,0.238968797952552,0.445597348164788,0.566153061577665,0.809621403349789,0.292255857911312,0,0,0.99358059645788,0.890328018336276,0.325773918707152,0.164970122972535,0,1.21390318077491,0.906970670894253,0,0,0,0,0,0,0,0,0,0.340439605753788,4.86164953884538,1.16422815404479,1.71469628025274,0.354680467284547,0.356737635204141,0.329098041204242,0.304464949114599,0.23467170806371,0,7.27743713581374,0,0,0,0,0,0,1.48340241608408,0,0,0.185194527369712,0,0,0,0,0,0,0,2.68885594543965,1.01659733563424,0.540026704109006,0,0,0.269728692769641,0.165306911450672,0,0,0,3.94585057078933,1.19613236835183,0.66183396182839,0.777804753376191,0.258319646955462,0.506868376472335,0.352071715937262,0.5208175393758,2.9360616439199,9.42178071221424,7.20075015644664,0,0.405450430580328,0.102710957164827,0.25984164595559,0.179026695667481,0,0,0,0,0.15241361331,0,0,0,0.116876902181569,0.226730383615211,0,0.0897138566094757,0,0,0,0,0,0.501572104035363,3.3885110557024,0.920650473014354,1.14579102687879,1.20297227640581,1.37016503954128,0,0.675022500231806,0.45032120322422,0.453142408984205,1.03552062350364,2.59468368960442,3.59122386060928,2.56100408631201,1.21553358534147,0.419226325255965,0.551530525350042,0.666740183404846,0.618105171716683,1.92551525755089,1.26348605881899,0.760437899670719,0.754505365544305,0.842773567228942,0.768301828858431,0.861532034334199,0.952587382566147,1.62238056322798,0.77163688185482,0.824171801606613,0.588795680537589,1.37147700954166,0.70990322463735,0.715308569841963,0.872078499793971,0.564656282491984,0.846146078916765,0.548783918618318,0.526139422875686,1.49384525230448,1.12228454331548,0.355905054372522,1.47756723563345,0.409231043169689,1.08455788830176,0.192906610981141,1.99848462350357,1.16965804222704,0.859484216193193,0.57386499620653,0.220591419119515,0
|short_description=p4@Rimklb
|short_description=p4@Rimklb
}}
}}

Latest revision as of 14:36, 26 September 2015

Short description:p4@Rimklb
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_4_at_Rimklb_5end
Coexpression cluster:MCL_coexpression_mm9:2275
Association with transcript: 124bp_to_NM_027664, uc009dpg.1_5end
EntrezGene:Rimklb
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p4@Rimklb

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G72.56
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.70
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C21.09
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.22
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.19
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C39.31
Mouse Granule cells, donor2.CNhs12357.11731-123E39.52
Mouse Granule cells, donor3.CNhs12108.11636-122C710.14
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.90
Mouse Microglia, donor2.CNhs12634.11736-123E81.54
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D51.66
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F52.57
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D93.37
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F14.86
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D54.86
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D23.43
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F23.64
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D61.84
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.77
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D71.23
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D411.74
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F411.25
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D812.50
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.84
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.56
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.61
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D64.42
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F65.55
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E15.96
Mouse Schwann, donor1.CNhs12507.11728-123D90.15
Mouse Schwann, donor2.CNhs12573.11746-123F90.15
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.14
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G64.23
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.00
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C50.17
adrenal gland, embryo E16.CNhs11004.1254-43D60.91
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.15
adrenal gland, neonate N00.CNhs11191.1311-23C10.24
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.14
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.88
cerebellum, neonate N30.CNhs11135.1395-42I20.21
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A40.30
corpus striatum, adult.CNhs10487.19-21D81.83
corpus striatum, neonate N00.CNhs11226.630-43F12.76
cortex, adult.CNhs10473.12-14D50.52
cortex, neonate N30.CNhs11107.1392-42F20.26
diencephalon, adult.CNhs10482.20-12F20.42
diencephalon, neonate N30.CNhs11201.1388-42B20.65
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.92
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.12
epididymis, adult.CNhs10490.58-23B21.01
eyeball, adult.CNhs10484.31-12G40.42
eyeball, embryo E12.CNhs11016.345-16C62.47
eyeball, embryo E14.CNhs10521.399-16E24.60
eyeball, embryo E15.CNhs10593.426-16C93.60
eyeball, embryo E17.CNhs11023.1261-18D44.52
eyeball, neonate N00.CNhs11207.633-15C65.10
eyeball, neonate N01.CNhs11140.1532-43E74.61
eyeball, neonate N02.CNhs11205.1551-44G83.56
eyeball, neonate N16.CNhs11188.777-19A21.55
forelimb, embryo E11.CNhs10596.335-25E22.59
forelimb, embryo E12.CNhs10600.359-14H23.03
forelimb, embryo E13.CNhs10589.384-1E22.11
forelimb, embryo E14.CNhs10577.413-26A81.32
forelimb, embryo E15.CNhs11007.437-20E70.56
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.80
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.41
heart, embryo E12.CNhs11015.353-12F50.47
heart, embryo E13.CNhs11013.376-3I90.36
heart, embryo E14.CNhs10597.403-26D40.24
heart, embryo E15.CNhs11017.431-16C80.20
heart, embryo E16.CNhs11021.457-17C60.46
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.16
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.13
hippocampus, adult.CNhs10478.13-16E80.21
hippocampus, neonate N00.CNhs11228.627-43G13.91
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I51.07
intestine, embryo E13.CNhs11010.381-16D52.09
intestine, embryo E15.CNhs10602.976-16D80.13
intestine, embryo E16.CNhs10585.463-22H40.40
intestine, embryo E17.CNhs10582.482-18D30.22
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.16
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.22
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.95
kidney, embryo E15.CNhs10997.434-16F81.03
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I20.61
kidney, embryo E18.CNhs11001.1288-20C70.39
kidney, neonate N00.CNhs11214.646-21G70.56
kidney, neonate N10.CNhs11206.758-6D50.19
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.50
liver, embryo E13.CNhs10524.378-3H60.20
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G21.71
lung, embryo E14.CNhs10604.404-26F80.65
lung, embryo E15.CNhs11020.432-17C50.68
lung, embryo E16.CNhs10998.458-17B60.23
lung, embryo E17.CNhs10605.480-44A60.50
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.32
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.16
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C20.96
medulla oblongata, neonate N30.CNhs11200.1396-42A31.41
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.32
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E31.08
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.24
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.45
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.57
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.81
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.29
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I90.00
ovary, adult.CNhs10507.91-2I70.99
ovary, embryo E18.CNhs11040.505-44H70.89
ovary, neonate N00.CNhs11217.1299-22I40.33
oviduct, adult pregnant day01.CNhs10500.988-6G60.16
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F41.21
pancreas, embryo E15.CNhs11042.1556-45F20.91
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.34
pituitary gland, embryo E12.CNhs11018.346-16E64.86
pituitary gland, embryo E13.CNhs11009.370-44C71.16
pituitary gland, embryo E14.CNhs11037.398-44A51.71
pituitary gland, embryo E15.CNhs10592.427-16B90.35
pituitary gland, embryo E16.CNhs11036.449-43F60.36
pituitary gland, embryo E17.CNhs11039.1265-44F50.33
pituitary gland, neonate N00.CNhs11190.1308-22E90.30
placenta, adult pregnant day10.CNhs10472.539-13I70.23
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F87.28
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.00
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C91.48
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.19
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E32.69
stomach, embryo E15.CNhs10603.1252-16G81.02
stomach, embryo E16.CNhs11022.459-17D40.54
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.27
stomach, neonate N07.CNhs11210.718-18A90.17
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G53.95
testis, embryo E13.CNhs11031.389-23F51.20
testis, embryo E15.CNhs11034.443-27C50.66
testis, embryo E16.CNhs11033.470-26G50.78
testis, embryo E17.CNhs11029.486-18I50.26
testis, embryo E18.CNhs11027.503-18G50.51
testis, neonate N00.CNhs11189.1300-22B70.35
testis, neonate N07.CNhs11222.726-26I40.52
testis, neonate N10.CNhs11204.763-44D92.94
testis, neonate N20.CNhs11110.839-18H39.42
testis, neonate N30.CNhs11130.1391-42E27.20
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.41
thymus, embryo E15.CNhs11005.430-45I20.10
thymus, embryo E16.CNhs11002.456-26C50.26
thymus, embryo E17.CNhs10581.478-18C10.18
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.15
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.12
tongue, adult.CNhs10499.32-1B40.23
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.09
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A13.39
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.92
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A31.15
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D71.20
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A41.37
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.68
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.45
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.45
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A91.04
whole body, embryo E11.CNhs11014.324-5I82.59
whole body, embryo E12.CNhs10587.857-27C93.59
whole body, embryo E13.CNhs10512.372-23H22.56
whole body, embryo E14.5.CNhs10578.420-27D21.22
whole body, embryo E14.CNhs10519.395-14B10.42
whole body, embryo E16.CNhs10514.453-14F20.55
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.67
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.62
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.93
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.26
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.75
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.84
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.77
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.86
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.62
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.77
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.59
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.37
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.71
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.72
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.87
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.85
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.55
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.49
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.12
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.36
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.48
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.08
whole body, embryo E17.5.CNhs10513.490-9F90.19
whole body, embryo E17.CNhs10517.475-3I52.00
whole body, embryo E18.CNhs10516.493-3B31.17
whole body, neonate N00.CNhs10525.657-19C20.86
whole body, neonate N01.CNhs10576.659-23C60.57
whole body, neonate N06.CNhs10515.692-21D10.22
whole body, neonate N10.CNhs10518.761-6B40.00





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
neurectoderm7.40e-1864
neural plate7.40e-1864
presumptive neural plate7.40e-1864
ecto-epithelium1.23e-1673
ectoderm-derived structure5.60e-1595
ectoderm5.60e-1595
presumptive ectoderm5.60e-1595
pre-chordal neural plate2.98e-1349
gray matter3.38e-1334
central nervous system4.98e-1273
neural tube9.67e-1252
neural rod9.67e-1252
future spinal cord9.67e-1252
neural keel9.67e-1252
nervous system1.93e-1175
regional part of nervous system5.72e-1154
structure with developmental contribution from neural crest7.38e-1192
sense organ9.27e-1012
sensory system9.27e-1012
entire sense organ system9.27e-1012
eye7.96e-099
camera-type eye7.96e-099
simple eye7.96e-099
immature eye7.96e-099
ocular region7.96e-099
visual system7.96e-099
face7.96e-099
optic cup7.96e-099
optic vesicle7.96e-099
eye primordium7.96e-099
head8.40e-0913
ectodermal placode8.40e-0913
brain grey matter1.89e-0829
regional part of telencephalon1.89e-0829
telencephalon1.89e-0829
spinal cord2.17e-086
dorsal region element2.17e-086
dorsum2.17e-086
regional part of forebrain9.45e-0839
forebrain9.45e-0839
future forebrain9.45e-0839
regional part of spinal cord1.09e-075
gray matter of spinal cord1.09e-075
corpus striatum1.67e-075
striatum1.67e-075
ventral part of telencephalon1.67e-075
future corpus striatum1.67e-075
anterior neural tube2.00e-0740
regional part of brain3.15e-0746
brain5.92e-0747
future brain5.92e-0747
subdivision of head7.11e-0711
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr6:122436142..122436198,-&oldid=4258524"