FFCP PHASE1:Mm9::chr2:32596972..32597019,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=27387 | |EntrezGene=27387 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=13 | |MCL_coexpression_id=13 | ||
|TSSclassifier=NA | |||
|UniProt=A2AK86 | |UniProt=A2AK86 | ||
|association_with_transcript=0bp_to_ENSMUST00000131101,ENSMUST00000139563_5end | |association_with_transcript=0bp_to_ENSMUST00000131101,ENSMUST00000139563_5end | ||
|cluster_id=chr2:32596972..32597019,+ | |||
|description=CAGE_peak_3_at_Sh2d3c_5end | |description=CAGE_peak_3_at_Sh2d3c_5end | ||
|id=chr2:32596972..32597019,+ | |id=chr2:32596972..32597019,+ | ||
|ontology_enrichment_celltype=CL:0000540!6.95e-18!33;CL:0000047!6.95e-18!33;CL:0000031!6.95e-18!33;CL:0000404!6.95e-18!33;CL:0000117!5.74e-15!23;CL:0000337!5.74e-15!23;CL:0002319!1.48e-13!43;CL:0000221!2.28e-13!44;CL:0000133!2.28e-13!44;CL:0000393!1.25e-12!39;CL:0000211!1.25e-12!39;CL:0000055!2.43e-09!50 | |ontology_enrichment_celltype=CL:0000540!6.95e-18!33;CL:0000047!6.95e-18!33;CL:0000031!6.95e-18!33;CL:0000404!6.95e-18!33;CL:0000117!5.74e-15!23;CL:0000337!5.74e-15!23;CL:0002319!1.48e-13!43;CL:0000221!2.28e-13!44;CL:0000133!2.28e-13!44;CL:0000393!1.25e-12!39;CL:0000211!1.25e-12!39;CL:0000055!2.43e-09!50 | ||
|ontology_enrichment_celltype_v019_2=CL:0000540,1.16e-20,33;CL:0000047,1.16e-20,33;CL:0000031,1.16e-20,33;CL:0000404,1.16e-20,33;CL:0000117,6.82e-18,23;CL:0000337,6.82e-18,23;CL:0000393,2.83e-15,39;CL:0000211,2.83e-15,39;CL:0002319,4.64e-14,43;CL:0000221,2.01e-13,44;CL:0000133,2.01e-13,44 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!7.16e-31!73;UBERON:0005743!7.16e-31!73;UBERON:0000073!1.56e-30!75;UBERON:0001016!1.56e-30!75;UBERON:0002346!5.10e-29!71;UBERON:0003075!5.10e-29!71;UBERON:0007284!5.10e-29!71;UBERON:0004121!5.84e-29!102;UBERON:0000924!5.84e-29!102;UBERON:0006601!5.84e-29!102;UBERON:0000033!1.68e-24!63;UBERON:0001049!5.05e-24!52;UBERON:0005068!5.05e-24!52;UBERON:0006241!5.05e-24!52;UBERON:0007135!5.05e-24!52;UBERON:0000955!1.96e-22!50;UBERON:0006238!1.96e-22!50;UBERON:0003056!5.31e-22!49;UBERON:0002616!6.56e-22!49;UBERON:0002020!1.01e-19!34;UBERON:0003080!8.58e-19!40;UBERON:0002780!3.24e-18!39;UBERON:0001890!3.24e-18!39;UBERON:0006240!3.24e-18!39;UBERON:0002791!2.11e-16!29;UBERON:0003528!2.11e-16!29;UBERON:0001893!2.11e-16!29;UBERON:0000956!1.27e-11!21;UBERON:0001869!1.27e-11!21;UBERON:0000203!1.27e-11!21;UBERON:0007811!1.88e-11!86;UBERON:0000153!1.64e-10!94;UBERON:0002619!1.55e-09!17;UBERON:0002021!3.59e-08!10;UBERON:0000411!3.59e-08!10;UBERON:0001950!3.59e-08!10;UBERON:0000468!4.52e-07!333 | |ontology_enrichment_uberon=UBERON:0001017!7.16e-31!73;UBERON:0005743!7.16e-31!73;UBERON:0000073!1.56e-30!75;UBERON:0001016!1.56e-30!75;UBERON:0002346!5.10e-29!71;UBERON:0003075!5.10e-29!71;UBERON:0007284!5.10e-29!71;UBERON:0004121!5.84e-29!102;UBERON:0000924!5.84e-29!102;UBERON:0006601!5.84e-29!102;UBERON:0000033!1.68e-24!63;UBERON:0001049!5.05e-24!52;UBERON:0005068!5.05e-24!52;UBERON:0006241!5.05e-24!52;UBERON:0007135!5.05e-24!52;UBERON:0000955!1.96e-22!50;UBERON:0006238!1.96e-22!50;UBERON:0003056!5.31e-22!49;UBERON:0002616!6.56e-22!49;UBERON:0002020!1.01e-19!34;UBERON:0003080!8.58e-19!40;UBERON:0002780!3.24e-18!39;UBERON:0001890!3.24e-18!39;UBERON:0006240!3.24e-18!39;UBERON:0002791!2.11e-16!29;UBERON:0003528!2.11e-16!29;UBERON:0001893!2.11e-16!29;UBERON:0000956!1.27e-11!21;UBERON:0001869!1.27e-11!21;UBERON:0000203!1.27e-11!21;UBERON:0007811!1.88e-11!86;UBERON:0000153!1.64e-10!94;UBERON:0002619!1.55e-09!17;UBERON:0002021!3.59e-08!10;UBERON:0000411!3.59e-08!10;UBERON:0001950!3.59e-08!10;UBERON:0000468!4.52e-07!333 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.91e-35,73;UBERON:0001016,1.00e-33,75;UBERON:0002346,7.91e-33,64;UBERON:0003075,7.91e-33,64;UBERON:0007284,7.91e-33,64;UBERON:0004121,3.60e-31,95;UBERON:0000924,3.60e-31,95;UBERON:0006601,3.60e-31,95;UBERON:0000073,7.16e-29,54;UBERON:0001049,3.19e-27,52;UBERON:0005068,3.19e-27,52;UBERON:0006241,3.19e-27,52;UBERON:0007135,3.19e-27,52;UBERON:0010371,1.35e-25,73;UBERON:0003056,6.16e-25,49;UBERON:0000955,6.27e-23,47;UBERON:0006238,6.27e-23,47;UBERON:0002020,1.45e-22,34;UBERON:0002616,2.60e-22,46;UBERON:0010314,5.04e-21,92;UBERON:0003080,5.06e-21,40;UBERON:0002780,2.50e-20,39;UBERON:0001890,2.50e-20,39;UBERON:0006240,2.50e-20,39;UBERON:0003528,1.51e-18,29;UBERON:0002791,1.51e-18,29;UBERON:0001893,1.51e-18,29;UBERON:0000956,8.96e-13,21;UBERON:0001869,8.96e-13,21;UBERON:0000203,8.96e-13,21;UBERON:0002619,2.97e-10,17;UBERON:0002021,1.29e-09,10;UBERON:0000411,1.29e-09,10;UBERON:0001950,1.29e-09,10;UBERON:0002420,4.93e-07,8;UBERON:0007245,4.93e-07,8;UBERON:0010009,4.93e-07,8;UBERON:0010011,4.93e-07,8;UBERON:0000454,4.93e-07,8 | |||
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|phase1_expression=0.640595388419176,0,0,0,0.500895729946347,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.57181818634493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.523523743973798,0,0,0,0,0,0,0,0.218025156380447,0.219686182734472,0.388859798148567,0,0,0.167782606057736,0,0,0,0.286533439938757,0,27.5150386769053,26.9785399428737,20.9164363157039,0,0,0,0,0,1.19840044207362,1.92109152660777,14.6202353354953,17.1457541681247,12.6194976810829,26.5655415495537,18.5529574399355,16.2912762955889,17.1563393122643,19.3035945188104,27.5289702498472,17.3654779795855,22.1193407888991,29.4106421638332,31.929187617241,25.5247551572812,20.1011759280994,12.380777420697,18.6413862287708,26.8112012781038,24.7726724590439,25.1639251864156,0.454357159999104,0.604572480854284,1.44932244350839,0,0,0,0,0,0.842666520790511,0,0,0,0.422530259330042,0,0,0,0,0,0,0.45673551887624,0,0.445326417194474,2.08182392119363,4.87144765299426,1.61430848079241,2.86373017049983,2.11659672844269,0.125666591329675,0,0.144599356919912,0,0,0,0,0,30.4492028892009,26.5997317653088,0,0,0,0,18.1246673679835,10.980014467647,20.6073137465098,23.292458905765,24.0372529890511,17.0386196538839,15.7374025175725,2.24046600470696,0,0,1.05220927943237,3.513251959993,5.51765050640335,7.56260945182467,7.23383125611432,6.32739442107349,10.6334387836425,11.4316103962869,2.84573707812917,0.215567992932842,0.378212160335639,1.23165786914764,1.09597866213787,0.834141747676794,0,0.205782136407943,0.199034266818493,0,0,0,1.65700618028402,2.11073453982987,0.900310307305074,0.946978942340841,0.590292695242212,0.154267112887378,0.930135779001631,1.07309360559848,0.116765342367169,0.329119699826961,0.32833492815819,0.0810688095458557,0.292399974850665,0.439100230582101,0,10.0939175310781,15.1269780197548,0,0,1.70630600428187,1.62565670302307,2.83508414908605,1.61346819698674,1.55664630691409,0.570676878337677,0,1.15289268306808,1.25667604400135,0.198956472041151,0.58489226135736,0,0,0.199141273254367,0.758671603812327,0.342745537829186,0,0.407302655690628,0.387904974335251,0.420814919341911,0.126473074248515,0,0,0,0,0,0,0.224862112384854,0,0,0,0,0,0,0,0,0,0,0,0,0.369506380333209,0.947457058852424,0.162964976442026,0.169745085775188,0,0,0,0.975668239288994,0.788175720530955,0.44292937929755,0.637819074629948,0,0,0.144649058581512,0,0,0,0,19.5871719785106,16.5268478095006,0,0,2.83957397474631,3.90438744296638,7.53981892064796,4.77937595905104,4.23317480756549,7.07691326972081,7.2865926301481,8.18316402151673,8.30104333687699,11.2462460747632,0.567760340833074,1.42452482933804,0.977321756121456,1.31976098378028,0,0.728341908464944,0,0.565815239267694,0.295301892880773,0,0,0,0.712994756769443,0.316036757935816,0,1.03135543248187,0.340439605753788,2.70091641046965,4.39819524861365,1.50035924522115,2.6601035046341,2.14042581122485,2.63278432963394,4.26250928760439,0,0.42366414172764,0.441056796109924,0,0,0.120625849856312,0.119372344003136,0.164140899745061,0,22.8073121472927,0,0.206386867963223,0.185194527369712,0,0,0,0,0,0,0,2.05618395827738,1.82987520414164,0.972048067396211,0.209088296014469,1.09181281873089,1.07891477107857,1.32245529160537,0,0,1.24267862617385,0,0,0,0.388902376688095,1.6790777052105,0.675824501963113,2.34714477291508,0.2604087696879,0.104859344425711,0.241584120826006,0.576060012515731,0,1.41907650703115,0.410843828659309,0,0,0,0.120195449519969,0,0,0.0762068066549998,0,0,0.0962118416403295,0,0,3.32978930061097,0.717710852875806,0.839423081820392,0.579568782096571,0,0.36630324853453,0.214368379079066,0,33.885110557024,21.6352861158373,20.6242384838183,21.1379414282736,26.718218271055,25.6833925112498,32.4010800111267,34.674732648265,30.8136838109259,33.6544202638683,3.84013186061454,5.58634822761443,3.24393850932855,6.07766792670735,4.82110274044359,3.67687016900028,3.11145418922261,2.88449080134452,2.88827288632634,5.81203587056734,2.5347929989024,2.45214243801899,2.99652823903624,3.84150914429216,3.56099907524802,5.23923060411381,3.1288768005111,3.8581844092741,3.29668720642645,4.41596760403192,3.08582327146874,3.19456451086807,2.62279808942053,2.47088908274958,4.14081273827455,3.38458431566706,4.024415403201,4.47218509444333,2.30866993537965,1.12228454331548,2.84724043498018,3.64466584789585,2.45538625901814,2.94379998253335,2.70069255373598,9.99242311751784,3.04111090979031,3.65280791882107,2.29545998482612,1.10295709559758,1.15933917810211 | ||
|short_description=p3@Sh2d3c | |short_description=p3@Sh2d3c | ||
}} | }} |
Latest revision as of 14:43, 26 September 2015
Short description: | p3@Sh2d3c |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Sh2d3c_5end |
Coexpression cluster: | MCL_coexpression_mm9:13 |
Association with transcript: | 0bp_to_ENSMUST00000131101, ENSMUST00000139563_5end |
EntrezGene: | Sh2d3c |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 1.16e-20 | 33 |
neuronal stem cell | 1.16e-20 | 33 |
neuroblast | 1.16e-20 | 33 |
electrically signaling cell | 1.16e-20 | 33 |
CNS neuron (sensu Vertebrata) | 6.82e-18 | 23 |
neuroblast (sensu Vertebrata) | 6.82e-18 | 23 |
electrically responsive cell | 2.83e-15 | 39 |
electrically active cell | 2.83e-15 | 39 |
neural cell | 4.64e-14 | 43 |
ectodermal cell | 2.01e-13 | 44 |
neurectodermal cell | 2.01e-13 | 44 |