FFCP PHASE1:Mm9::chr17:53618537..53618562,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=271457 | |EntrezGene=271457 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=Q9CQD1,Q4VAA1 | |UniProt=Q9CQD1,Q4VAA1 | ||
|association_with_transcript=0bp_to_ENSMUST00000017975,NM_025887,uc008czn.1_5end | |association_with_transcript=0bp_to_ENSMUST00000017975,NM_025887,uc008czn.1_5end | ||
|cluster_id=chr17:53618537..53618562,+ | |||
|description=CAGE_peak_4_at_Rab5a_5end | |description=CAGE_peak_4_at_Rab5a_5end | ||
|id=chr17:53618537..53618562,+ | |id=chr17:53618537..53618562,+ | ||
|ontology_enrichment_celltype=CL:0000117!1.89e-09!23;CL:0000337!1.89e-09!23;CL:0000540!5.22e-08!33;CL:0000047!5.22e-08!33;CL:0000031!5.22e-08!33;CL:0000404!5.22e-08!33 | |ontology_enrichment_celltype=CL:0000117!1.89e-09!23;CL:0000337!1.89e-09!23;CL:0000540!5.22e-08!33;CL:0000047!5.22e-08!33;CL:0000031!5.22e-08!33;CL:0000404!5.22e-08!33 | ||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.89e-09,23;CL:0000337,1.89e-09,23;CL:0000540,5.22e-08,33;CL:0000047,5.22e-08,33;CL:0000031,5.22e-08,33;CL:0000404,5.22e-08,33 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!8.72e-18!71;UBERON:0003075!8.72e-18!71;UBERON:0007284!8.72e-18!71;UBERON:0004121!1.26e-17!102;UBERON:0000924!1.26e-17!102;UBERON:0006601!1.26e-17!102;UBERON:0000033!2.13e-17!63;UBERON:0001049!4.57e-17!52;UBERON:0005068!4.57e-17!52;UBERON:0006241!4.57e-17!52;UBERON:0007135!4.57e-17!52;UBERON:0000073!2.25e-16!75;UBERON:0001016!2.25e-16!75;UBERON:0000955!3.12e-16!50;UBERON:0006238!3.12e-16!50;UBERON:0002616!1.10e-15!49;UBERON:0001017!1.32e-15!73;UBERON:0005743!1.32e-15!73;UBERON:0003056!4.23e-15!49;UBERON:0002020!1.25e-14!34;UBERON:0003080!4.86e-14!40;UBERON:0002780!1.73e-13!39;UBERON:0001890!1.73e-13!39;UBERON:0006240!1.73e-13!39;UBERON:0002791!4.00e-12!29;UBERON:0003528!4.00e-12!29;UBERON:0001893!4.00e-12!29;UBERON:0000025!1.98e-10!114;UBERON:0004111!7.09e-10!122;UBERON:0000956!2.43e-08!21;UBERON:0001869!2.43e-08!21;UBERON:0000203!2.43e-08!21;UBERON:0002021!1.47e-07!10;UBERON:0000411!1.47e-07!10;UBERON:0001950!1.47e-07!10;UBERON:0007811!2.22e-07!86;UBERON:0002619!2.59e-07!17;UBERON:0000153!6.16e-07!94 | |ontology_enrichment_uberon=UBERON:0002346!8.72e-18!71;UBERON:0003075!8.72e-18!71;UBERON:0007284!8.72e-18!71;UBERON:0004121!1.26e-17!102;UBERON:0000924!1.26e-17!102;UBERON:0006601!1.26e-17!102;UBERON:0000033!2.13e-17!63;UBERON:0001049!4.57e-17!52;UBERON:0005068!4.57e-17!52;UBERON:0006241!4.57e-17!52;UBERON:0007135!4.57e-17!52;UBERON:0000073!2.25e-16!75;UBERON:0001016!2.25e-16!75;UBERON:0000955!3.12e-16!50;UBERON:0006238!3.12e-16!50;UBERON:0002616!1.10e-15!49;UBERON:0001017!1.32e-15!73;UBERON:0005743!1.32e-15!73;UBERON:0003056!4.23e-15!49;UBERON:0002020!1.25e-14!34;UBERON:0003080!4.86e-14!40;UBERON:0002780!1.73e-13!39;UBERON:0001890!1.73e-13!39;UBERON:0006240!1.73e-13!39;UBERON:0002791!4.00e-12!29;UBERON:0003528!4.00e-12!29;UBERON:0001893!4.00e-12!29;UBERON:0000025!1.98e-10!114;UBERON:0004111!7.09e-10!122;UBERON:0000956!2.43e-08!21;UBERON:0001869!2.43e-08!21;UBERON:0000203!2.43e-08!21;UBERON:0002021!1.47e-07!10;UBERON:0000411!1.47e-07!10;UBERON:0001950!1.47e-07!10;UBERON:0007811!2.22e-07!86;UBERON:0002619!2.59e-07!17;UBERON:0000153!6.16e-07!94 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0010314,3.67e-21,92;UBERON:0000073,2.82e-18,54;UBERON:0002346,1.60e-17,64;UBERON:0003075,1.60e-17,64;UBERON:0007284,1.60e-17,64;UBERON:0001049,4.57e-17,52;UBERON:0005068,4.57e-17,52;UBERON:0006241,4.57e-17,52;UBERON:0007135,4.57e-17,52;UBERON:0004121,5.22e-17,95;UBERON:0000924,5.22e-17,95;UBERON:0006601,5.22e-17,95;UBERON:0010371,1.21e-16,73;UBERON:0001016,2.25e-16,75;UBERON:0001017,1.32e-15,73;UBERON:0003056,4.23e-15,49;UBERON:0002020,1.25e-14,34;UBERON:0000955,1.92e-14,47;UBERON:0006238,1.92e-14,47;UBERON:0003080,4.86e-14,40;UBERON:0002616,6.57e-14,46;UBERON:0002780,1.73e-13,39;UBERON:0001890,1.73e-13,39;UBERON:0006240,1.73e-13,39;UBERON:0003528,4.00e-12,29;UBERON:0002791,4.00e-12,29;UBERON:0001893,4.00e-12,29;UBERON:0000025,1.99e-10,114;UBERON:0004111,7.13e-10,122;UBERON:0000956,2.43e-08,21;UBERON:0001869,2.43e-08,21;UBERON:0000203,2.43e-08,21;UBERON:0002021,1.47e-07,10;UBERON:0000411,1.47e-07,10;UBERON:0001950,1.47e-07,10;UBERON:0002619,2.59e-07,17 | |||
|phase1_expression=6.56610273129655,6.2815573375085,5.91499011206397,7.56160528267075,7.01254021924886,3.3575854382378,2.33612640595526,1.54947988129892,3.23814060948833,3.97909694747389,4.79410311031414,2.71225340584144,0.856003649656029,0.961624426608971,10.6595123781012,8.09901069559304,10.4934281719222,3.47008381894061,4.11343300817216,4.2438965179803,5.3577272795174,1.68794617041505,2.87319768052829,3.03985603307473,1.60586496747019,6.89078356938024,2.15380998079537,1.939241094173,3.23039813075836,2.26827116783938,2.88249663851896,0.635030673459631,2.46025915033828,0,0.577703239502549,1.66234645358492,2.04169356262369,6.27797446105362,3.906676722619,7.85285615960697,7.05877785637217,10.2456822743767,5.34061388334269,2.89562681343828,2.93993100536592,5.32285581268876,1.56478268869608,5.66865406589161,3.95435128922049,3.69416808241138,5.31948402176378,2.87505128729943,6.04017381807851,3.62681071005672,3.6970317905671,2.31533492432352,2.57880095944881,5.15672092277442,7.68802551266472,8.99284664762456,6.97214543856797,2.03306719241479,1.77858959222228,3.1496490104849,2.96659908770092,2.1314403448383,1.79760066311043,1.53687322128622,9.22837549545451,7.69533848490637,8.41299845405528,13.139945282575,11.4851641294839,8.81933754347669,8.53024692062304,11.9498442259303,15.4162233399144,21.1960981221412,19.8152427900554,9.23204014111357,9.5147149346506,10.939180781692,18.1468949350898,13.5063026407603,14.9742282821274,16.2045722010517,12.2439645487229,13.047961207771,12.8734528666413,8.69072941228034,9.27566363845369,6.88339101585109,20.3991400112325,0.539703191637817,4.54843492213368,5.82434953226536,6.31999890592883,3.57903677413921,2.85764605063156,1.7666978725517,10.9857867425811,7.69958864485907,33.1246811618639,7.11066703153331,5.41227602528035,4.30711771307668,4.54972000513305,3.76806803072898,3.36619248741323,7.12522267511159,5.89850111004862,6.69824052286711,6.45723392316964,8.44046787094686,9.17191915658498,6.6603293404728,5.43828929015623,5.06097749219691,9.73071607144862,5.50007289821191,5.30019644304944,9.21262980956922,0,12.5895742714965,5.44561437714983,2.81002760729451,4.67278985573089,3.59941638596045,4.70159840170339,16.7765516133401,17.8425235099264,20.4816593943969,17.7300806596122,26.338692105024,18.90871205492,18.1710214635889,6.51771928642024,4.97627882440372,5.30717792710717,5.6819301089348,7.67710613479952,6.20735681970377,8.10279584124071,6.78171680260718,10.3415478710018,9.48041530107888,9.18276900685342,9.8307280880826,3.66465587985832,7.56424320671277,6.33424046990216,5.91828477554452,5.83899223373756,8.358051996532,6.58502836505419,6.56813080501028,4.21327912387941,5.40430604940902,3.9782889915383,8.49215667395558,7.03578179943289,10.2635375032778,9.46978942340841,8.46086196513836,6.78775296704464,8.8362899005155,8.04820204198858,9.5747580741079,10.5318303944627,10.9992200932994,11.4307021459657,9.9415991449226,9.66020507280623,10.0654814070279,15.9820360908737,13.4805042216863,4.29544417878937,3.70230793328962,6.61193576659225,6.0381534683714,3.47942145569652,2.62188582010345,3.7804267453628,3.99473814836374,2.84717436926707,4.11747386810027,5.52937459360593,5.76973768919337,4.67913809085888,3.59527763461689,3.02593269824572,3.18626037206988,4.55202962287396,4.22719496655997,5.63538678365402,5.09128319613286,6.7883370508669,5.61086559122549,6.0707075639287,8.11855813887812,5.49495547444812,5.42947521255922,0.889357881261447,5.5058884886311,7.86235980452812,5.17182858485164,8.31726497692862,8.44120059133459,5.85639459097266,4.89083433666378,4.21551589615092,2.74561413188081,12.9391385874619,2.97712758134803,1.5601883655728,3.28352541331245,3.76734568396016,4.3419916922703,5.35784251483154,6.63219941196697,6.19266910479698,5.43184274480602,5.86725620721255,4.18765643604539,8.56957107189649,5.85400943573396,7.40885177299098,5.97954662051692,6.218735977642,7.20998584749247,5.35323443784276,5.49666422609744,1.50791283939272,2.17562273527484,2.95058563811422,3.31124095565679,19.9082731584862,20.3948334670434,6.06559297893699,6.31177318010932,4.10160685241134,5.85658116444958,7.53981892064796,4.06246956519338,6.46116154838943,10.190755108398,6.07216052512342,8.18316402151673,7.11518000303742,15.7447445046685,4.25820255624806,6.23229612835393,9.93610452056814,4.78413356620353,6.63725691699814,3.64170954232472,2.41858845571801,3.96070667487386,3.2483208216885,3.07435147943927,6.20227903603731,5.81653967164009,4.27796854061666,2.52829406348653,5.27093042874994,2.06271086496374,10.5536277783674,9.18311579559682,5.56242340265844,6.64444808597936,8.15765074754458,5.52943334566419,10.6956863391379,6.69822888052118,6.10146440965647,7.20229040936989,3.08739757276947,11.2122652000206,8.23468576149118,5.1869115438214,5.61050016814741,8.53532678674319,2.91480836629851,20.2113579191456,4.78438466233988,3.50857675537478,3.33350149265481,7.15800136617826,6.56132293060921,4.11800711771741,12.0684685295637,8.6769900440668,9.95039811391851,5.72802370809068,5.53587988766987,4.87966721104437,5.400267041090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| ||
|short_description=p4@Rab5a | |short_description=p4@Rab5a | ||
}} | }} |
Latest revision as of 16:22, 26 September 2015
Short description: | p4@Rab5a |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Rab5a_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENSMUST00000017975, NM_025887, uc008czn.1_5end |
EntrezGene: | Rab5a |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.89e-09 | 23 |
neuroblast (sensu Vertebrata) | 1.89e-09 | 23 |
neuron | 5.22e-08 | 33 |
neuronal stem cell | 5.22e-08 | 33 |
neuroblast | 5.22e-08 | 33 |
electrically signaling cell | 5.22e-08 | 33 |