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FFCP PHASE1:Mm9::chr17:53618537..53618562,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=271457
|EntrezGene=271457
|HGNC=
|HGNC=
|TSSclassifier=NA
|UniProt=Q9CQD1,Q4VAA1
|UniProt=Q9CQD1,Q4VAA1
|association_with_transcript=0bp_to_ENSMUST00000017975,NM_025887,uc008czn.1_5end
|association_with_transcript=0bp_to_ENSMUST00000017975,NM_025887,uc008czn.1_5end
|cluster_id=chr17:53618537..53618562,+
|description=CAGE_peak_4_at_Rab5a_5end
|description=CAGE_peak_4_at_Rab5a_5end
|id=chr17:53618537..53618562,+
|id=chr17:53618537..53618562,+
|ontology_enrichment_celltype=CL:0000117!1.89e-09!23;CL:0000337!1.89e-09!23;CL:0000540!5.22e-08!33;CL:0000047!5.22e-08!33;CL:0000031!5.22e-08!33;CL:0000404!5.22e-08!33
|ontology_enrichment_celltype_v019_2=CL:0000117,1.89e-09,23;CL:0000337,1.89e-09,23;CL:0000540,5.22e-08,33;CL:0000047,5.22e-08,33;CL:0000031,5.22e-08,33;CL:0000404,5.22e-08,33
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002346!8.72e-18!71;UBERON:0003075!8.72e-18!71;UBERON:0007284!8.72e-18!71;UBERON:0004121!1.26e-17!102;UBERON:0000924!1.26e-17!102;UBERON:0006601!1.26e-17!102;UBERON:0000033!2.13e-17!63;UBERON:0001049!4.57e-17!52;UBERON:0005068!4.57e-17!52;UBERON:0006241!4.57e-17!52;UBERON:0007135!4.57e-17!52;UBERON:0000073!2.25e-16!75;UBERON:0001016!2.25e-16!75;UBERON:0000955!3.12e-16!50;UBERON:0006238!3.12e-16!50;UBERON:0002616!1.10e-15!49;UBERON:0001017!1.32e-15!73;UBERON:0005743!1.32e-15!73;UBERON:0003056!4.23e-15!49;UBERON:0002020!1.25e-14!34;UBERON:0003080!4.86e-14!40;UBERON:0002780!1.73e-13!39;UBERON:0001890!1.73e-13!39;UBERON:0006240!1.73e-13!39;UBERON:0002791!4.00e-12!29;UBERON:0003528!4.00e-12!29;UBERON:0001893!4.00e-12!29;UBERON:0000025!1.98e-10!114;UBERON:0004111!7.09e-10!122;UBERON:0000956!2.43e-08!21;UBERON:0001869!2.43e-08!21;UBERON:0000203!2.43e-08!21;UBERON:0002021!1.47e-07!10;UBERON:0000411!1.47e-07!10;UBERON:0001950!1.47e-07!10;UBERON:0007811!2.22e-07!86;UBERON:0002619!2.59e-07!17;UBERON:0000153!6.16e-07!94
|ontology_enrichment_uberon_v019_2=UBERON:0010314,3.67e-21,92;UBERON:0000073,2.82e-18,54;UBERON:0002346,1.60e-17,64;UBERON:0003075,1.60e-17,64;UBERON:0007284,1.60e-17,64;UBERON:0001049,4.57e-17,52;UBERON:0005068,4.57e-17,52;UBERON:0006241,4.57e-17,52;UBERON:0007135,4.57e-17,52;UBERON:0004121,5.22e-17,95;UBERON:0000924,5.22e-17,95;UBERON:0006601,5.22e-17,95;UBERON:0010371,1.21e-16,73;UBERON:0001016,2.25e-16,75;UBERON:0001017,1.32e-15,73;UBERON:0003056,4.23e-15,49;UBERON:0002020,1.25e-14,34;UBERON:0000955,1.92e-14,47;UBERON:0006238,1.92e-14,47;UBERON:0003080,4.86e-14,40;UBERON:0002616,6.57e-14,46;UBERON:0002780,1.73e-13,39;UBERON:0001890,1.73e-13,39;UBERON:0006240,1.73e-13,39;UBERON:0003528,4.00e-12,29;UBERON:0002791,4.00e-12,29;UBERON:0001893,4.00e-12,29;UBERON:0000025,1.99e-10,114;UBERON:0004111,7.13e-10,122;UBERON:0000956,2.43e-08,21;UBERON:0001869,2.43e-08,21;UBERON:0000203,2.43e-08,21;UBERON:0002021,1.47e-07,10;UBERON:0000411,1.47e-07,10;UBERON:0001950,1.47e-07,10;UBERON:0002619,2.59e-07,17
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|phase1_expression=6.56610273129655,6.2815573375085,5.91499011206397,7.56160528267075,7.01254021924886,3.3575854382378,2.33612640595526,1.54947988129892,3.23814060948833,3.97909694747389,4.79410311031414,2.71225340584144,0.856003649656029,0.961624426608971,10.6595123781012,8.09901069559304,10.4934281719222,3.47008381894061,4.11343300817216,4.2438965179803,5.3577272795174,1.68794617041505,2.87319768052829,3.03985603307473,1.60586496747019,6.89078356938024,2.15380998079537,1.939241094173,3.23039813075836,2.26827116783938,2.88249663851896,0.635030673459631,2.46025915033828,0,0.577703239502549,1.66234645358492,2.04169356262369,6.27797446105362,3.906676722619,7.85285615960697,7.05877785637217,10.2456822743767,5.34061388334269,2.89562681343828,2.93993100536592,5.32285581268876,1.56478268869608,5.66865406589161,3.95435128922049,3.69416808241138,5.31948402176378,2.87505128729943,6.04017381807851,3.62681071005672,3.6970317905671,2.31533492432352,2.57880095944881,5.15672092277442,7.68802551266472,8.99284664762456,6.97214543856797,2.03306719241479,1.77858959222228,3.1496490104849,2.96659908770092,2.1314403448383,1.79760066311043,1.53687322128622,9.22837549545451,7.69533848490637,8.41299845405528,13.139945282575,11.4851641294839,8.81933754347669,8.53024692062304,11.9498442259303,15.4162233399144,21.1960981221412,19.8152427900554,9.23204014111357,9.5147149346506,10.939180781692,18.1468949350898,13.5063026407603,14.9742282821274,16.2045722010517,12.2439645487229,13.047961207771,12.8734528666413,8.69072941228034,9.27566363845369,6.88339101585109,20.3991400112325,0.539703191637817,4.54843492213368,5.82434953226536,6.31999890592883,3.57903677413921,2.85764605063156,1.7666978725517,10.9857867425811,7.69958864485907,33.1246811618639,7.11066703153331,5.41227602528035,4.30711771307668,4.54972000513305,3.76806803072898,3.36619248741323,7.12522267511159,5.89850111004862,6.69824052286711,6.45723392316964,8.44046787094686,9.17191915658498,6.6603293404728,5.43828929015623,5.06097749219691,9.73071607144862,5.50007289821191,5.30019644304944,9.21262980956922,0,12.5895742714965,5.44561437714983,2.81002760729451,4.67278985573089,3.59941638596045,4.70159840170339,16.7765516133401,17.8425235099264,20.4816593943969,17.7300806596122,26.338692105024,18.90871205492,18.1710214635889,6.51771928642024,4.97627882440372,5.30717792710717,5.6819301089348,7.67710613479952,6.20735681970377,8.10279584124071,6.78171680260718,10.3415478710018,9.48041530107888,9.18276900685342,9.8307280880826,3.66465587985832,7.56424320671277,6.33424046990216,5.91828477554452,5.83899223373756,8.358051996532,6.58502836505419,6.56813080501028,4.21327912387941,5.40430604940902,3.9782889915383,8.49215667395558,7.03578179943289,10.2635375032778,9.46978942340841,8.46086196513836,6.78775296704464,8.8362899005155,8.04820204198858,9.5747580741079,10.5318303944627,10.9992200932994,11.4307021459657,9.9415991449226,9.66020507280623,10.0654814070279,15.9820360908737,13.4805042216863,4.29544417878937,3.70230793328962,6.61193576659225,6.0381534683714,3.47942145569652,2.62188582010345,3.7804267453628,3.99473814836374,2.84717436926707,4.11747386810027,5.52937459360593,5.76973768919337,4.67913809085888,3.59527763461689,3.02593269824572,3.18626037206988,4.55202962287396,4.22719496655997,5.63538678365402,5.09128319613286,6.7883370508669,5.61086559122549,6.0707075639287,8.11855813887812,5.49495547444812,5.42947521255922,0.889357881261447,5.5058884886311,7.86235980452812,5.17182858485164,8.31726497692862,8.44120059133459,5.85639459097266,4.89083433666378,4.21551589615092,2.74561413188081,12.9391385874619,2.97712758134803,1.5601883655728,3.28352541331245,3.76734568396016,4.3419916922703,5.35784251483154,6.63219941196697,6.19266910479698,5.43184274480602,5.86725620721255,4.18765643604539,8.56957107189649,5.85400943573396,7.40885177299098,5.97954662051692,6.218735977642,7.20998584749247,5.35323443784276,5.49666422609744,1.50791283939272,2.17562273527484,2.95058563811422,3.31124095565679,19.9082731584862,20.3948334670434,6.06559297893699,6.31177318010932,4.10160685241134,5.85658116444958,7.53981892064796,4.06246956519338,6.46116154838943,10.190755108398,6.07216052512342,8.18316402151673,7.11518000303742,15.7447445046685,4.25820255624806,6.23229612835393,9.93610452056814,4.78413356620353,6.63725691699814,3.64170954232472,2.41858845571801,3.96070667487386,3.2483208216885,3.07435147943927,6.20227903603731,5.81653967164009,4.27796854061666,2.52829406348653,5.27093042874994,2.06271086496374,10.5536277783674,9.18311579559682,5.56242340265844,6.64444808597936,8.15765074754458,5.52943334566419,10.6956863391379,6.69822888052118,6.10146440965647,7.20229040936989,3.08739757276947,11.2122652000206,8.23468576149118,5.1869115438214,5.61050016814741,8.53532678674319,2.91480836629851,20.2113579191456,4.78438466233988,3.50857675537478,3.33350149265481,7.15800136617826,6.56132293060921,4.11800711771741,12.0684685295637,8.6769900440668,9.95039811391851,5.72802370809068,5.53587988766987,4.87966721104437,5.40026704109006,3.97267762427491,4.14888871117737,1.75323650300267,3.2234847732881,4.4498510137285,3.24037433229482,4.97071450469541,6.20062232552609,5.98066184175915,9.10021697514037,7.00024278038572,6.71631082084202,8.95467465101124,9.15386461436881,10.2861464026721,9.54220034273969,10.8712854371703,8.06484017522023,3.47612232690996,3.44632865993279,3.90301637226344,3.11809975146708,2.8644271306797,3.9736270956253,3.846254384639,3.54454865218985,3.23092639834072,3.27689268616499,4.03304740547362,3.21611006441183,3.46362629905186,3.03879945672079,7.48210265930198,18.8688060367955,16.8662050425814,17.4600001018642,4.82973985080476,3.94133198447482,5.31139710375069,5.57357785605571,5.517293144389,24.8490810751509,25.7782132444019,15.4681788628637,13.5764014051513,18.4972280338073,29.4603619981983,24.9758325085768,17.5625269257446,17.2194115413998,22.2636934053283,9.02949923982337,5.98537310101547,7.0000778359195,5.34834777550247,7.75568701723535,8.08911437180062,7.11189528965169,7.62329711783909,7.70206103020357,7.83361356467772,6.84394109703647,6.60192194851267,5.3375659257833,6.33849008808206,5.80098236451694,6.66811167796303,5.67833197129792,6.75182271622968,11.1263193216893,7.65434384698866,8.22886205724997,6.56660482789549,6.91464950847231,8.72078499793971,7.90518795488777,8.2922315733843,8.59761472502031,9.47050961176234,6.79020569229309,6.73370725989286,8.06718123244384,5.22073756590486,7.36615877705441,7.7468420592983,5.5942917184531,5.24602213669686,6.08222181958062,4.94203424311086,4.97349663378993,7.50010825006353,5.33296021926969
|short_description=p4@Rab5a
|short_description=p4@Rab5a
}}
}}

Latest revision as of 16:22, 26 September 2015

Short description:p4@Rab5a
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_4_at_Rab5a_5end
Coexpression cluster:NA
Association with transcript: 0bp_to_ENSMUST00000017975, NM_025887, uc008czn.1_5end
EntrezGene:Rab5a
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p4@Rab5a

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G76.57
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I56.28
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I65.91
CD326+ enterocyte, pool1.CNhs13542.11848-124I37.56
CD326+ enterocyte, pool2.CNhs13197.11849-124I47.01
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I73.36
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I82.34
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E91.55
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E73.24
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F23.98
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E64.79
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F12.71
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.86
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.96
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A110.66
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A38.10
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A510.49
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A23.47
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A44.11
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A64.24
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A35.36
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H21.69
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I92.87
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D13.04
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D21.61
GP2+ M cell, pool1.CNhs13228.11845-124H96.89
GP2+ M cell, pool2.CNhs13231.11846-124I12.15
GP2+ M cell, pool3.CNhs13240.11847-124I21.94
Ileum epithelium, pool1.CNhs13199.10252-104B93.23
Ileum epithelium, pool2.CNhs13232.10253-104C12.27
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C82.88
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.64
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G62.46
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.58
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F61.66
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F72.04
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G86.28
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H13.91
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H37.85
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G97.06
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H210.25
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H45.34
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D82.90
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D92.94
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B35.32
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B71.56
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C25.67
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B83.95
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C33.69
Mouse Astrocytes, donor2.CNhs12078.11552-120C45.32
Mouse Astrocytes, donor3.CNhs12107.11633-122C42.88
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A26.04
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I93.63
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A13.70
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C12.32
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E12.58
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C55.16
Mouse Granule cells, donor1.CNhs12131.11713-123C37.69
Mouse Granule cells, donor2.CNhs12357.11731-123E38.99
Mouse Granule cells, donor3.CNhs12108.11636-122C76.97
Mouse Meningeal cells, donor1.CNhs12132.11716-123C62.03
Mouse Meningeal cells, donor3.CNhs12109.11639-122D11.78
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C73.15
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E72.97
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D22.13
Mouse Microglia, donor1.CNhs12629.11718-123C81.80
Mouse Microglia, donor2.CNhs12634.11736-123E81.54
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D59.23
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F57.70
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D98.41
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F113.14
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D511.49
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D28.82
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F28.53
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D611.95
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D315.42
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F321.20
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D719.82
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D49.23
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F49.51
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D810.94
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E418.15
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E513.51
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I614.97
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D616.20
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F612.24
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E113.05
Mouse Schwann, donor1.CNhs12507.11728-123D912.87
Mouse Schwann, donor2.CNhs12573.11746-123F98.69
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G39.28
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F76.88
Mouse hepatocyte, donor1.CNhs13078.11714-123C420.40
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.54
Mouse hepatocyte, donor6.CNhs13090.11822-124F44.55
Mouse hepatocyte, donor8.CNhs13091.11824-124F65.82
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A76.32
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I73.58
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E32.86
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I81.77
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G610.99
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H17.70
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I833.12
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B67.11
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G15.41
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G24.31
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G34.55
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B63.77
accessory axillary lymph node, adult.CNhs10475.1063-29H93.37
adrenal gland, adult.CNhs10508.49-24D77.13
adrenal gland, embryo E14.CNhs11038.406-44C55.90
adrenal gland, embryo E16.CNhs11004.1254-43D66.70
adrenal gland, embryo E17.CNhs11043.1263-45I16.46
adrenal gland, embryo E18.CNhs11026.1262-18F58.44
adrenal gland, neonate N00.CNhs11191.1311-23C19.17
adrenal gland, neonate N25.CNhs11223.1377-27I36.66
amnion, adult pregnant day17.5.CNhs10488.583-22A85.44
aorta, adult.CNhs10498.46-23H15.06
bone (os femoris), adult.CNhs10483.56-12G29.73
bone (os femoris), neonate N02.CNhs11227.1985-43F55.50
bone (os femoris), neonate N16.CNhs11225.1525-43A65.30
bone (os femoris), neonate N20.CNhs11195.1350-25C39.21
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B212.59
cerebellum, neonate N30.CNhs11135.1395-42I25.45
colon, adult.CNhs10468.36-18H72.81
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C74.67
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D13.60
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D44.70
corpora quadrigemina, adult.CNhs10501.16-22A416.78
corpus striatum, adult.CNhs10487.19-21D817.84
corpus striatum, neonate N00.CNhs11226.630-43F120.48
cortex, adult.CNhs10473.12-14D517.73
cortex, neonate N30.CNhs11107.1392-42F226.34
diencephalon, adult.CNhs10482.20-12F218.91
diencephalon, neonate N30.CNhs11201.1388-42B218.17
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B16.52
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A24.98
epididymis, adult.CNhs10490.58-23B25.31
eyeball, adult.CNhs10484.31-12G45.68
eyeball, embryo E12.CNhs11016.345-16C67.68
eyeball, embryo E14.CNhs10521.399-16E26.21
eyeball, embryo E15.CNhs10593.426-16C98.10
eyeball, embryo E17.CNhs11023.1261-18D46.78
eyeball, neonate N00.CNhs11207.633-15C610.34
eyeball, neonate N01.CNhs11140.1532-43E79.48
eyeball, neonate N02.CNhs11205.1551-44G89.18
eyeball, neonate N16.CNhs11188.777-19A29.83
forelimb, embryo E11.CNhs10596.335-25E23.66
forelimb, embryo E12.CNhs10600.359-14H27.56
forelimb, embryo E13.CNhs10589.384-1E26.33
forelimb, embryo E14.CNhs10577.413-26A85.92
forelimb, embryo E15.CNhs11007.437-20E75.84
forelimb, embryo E17.CNhs10598.1517-43C48.36
forelimb, embryo E18.CNhs11008.1520-43B56.59
gonad, embryo E13.CNhs11044.1564-45I66.57
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C84.21
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D25.40
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D53.98
heart, embryo E11.CNhs10586.331-24E98.49
heart, embryo E12.CNhs11015.353-12F57.04
heart, embryo E13.CNhs11013.376-3I910.26
heart, embryo E14.CNhs10597.403-26D49.47
heart, embryo E15.CNhs11017.431-16C88.46
heart, embryo E16.CNhs11021.457-17C66.79
heart, embryo E17.CNhs11025.479-18E58.84
heart, embryo E18.CNhs11030.1283-20G38.05
heart, neonate N00.CNhs11213.639-21E39.57
heart, neonate N03.CNhs11221.1349-25I210.53
heart, neonate N10.CNhs11118.749-24G111.00
heart, neonate N16.CNhs11209.782-15G111.43
heart, neonate N20.CNhs11127.821-26I69.94
heart, neonate N25.CNhs11196.1351-25D39.66
heart, neonate N30.CNhs11202.1390-42D210.07
hippocampus, adult.CNhs10478.13-16E815.98
hippocampus, neonate N00.CNhs11228.627-43G113.48
intestinal mucosa, adult.CNhs10506.860-29I34.30
intestine, adult.CNhs10496.178-9A33.70
intestine, embryo E12.CNhs11019.1251-16I56.61
intestine, embryo E13.CNhs11010.381-16D56.04
intestine, embryo E15.CNhs10602.976-16D83.48
intestine, embryo E16.CNhs10585.463-22H42.62
intestine, embryo E17.CNhs10582.482-18D33.78
intestine, embryo E18.CNhs10526.1289-20F73.99
intestine, neonate N00.CNhs11126.644-26D12.85
intestine, neonate N01.CNhs11192.1322-23E94.12
intestine, neonate N06.CNhs11102.688-20B85.53
intestine, neonate N07.CNhs11095.720-20F25.77
intestine, neonate N10.CNhs11098.755-23A54.68
intestine, neonate N20.CNhs11187.827-18D13.60
intestine, neonate N25.CNhs11121.1352-25E33.03
intestine, neonate N30.CNhs11131.1384-42G13.19
kidney, embryo E14.CNhs10606.411-4I94.55
kidney, embryo E15.CNhs10997.434-16F84.23
kidney, embryo E16.CNhs10584.464-22A55.64
kidney, embryo E17.CNhs11028.483-18I25.09
kidney, embryo E18.CNhs11001.1288-20C76.79
kidney, neonate N00.CNhs11214.646-21G75.61
kidney, neonate N10.CNhs11206.758-6D56.07
kidney, neonate N20.CNhs11113.832-19I18.12
kidney, neonate N25.CNhs11122.1353-25F35.49
kidney, neonate N30.CNhs11203.1385-42H15.43
liver, adult pregnant day01.CNhs10466.508-5B20.89
liver, embryo E12.CNhs10601.355-15F85.51
liver, embryo E13.CNhs10524.378-3H67.86
liver, embryo E14.CNhs10594.409-16E15.17
liver, embryo E15.CNhs10520.433-16D78.32
liver, embryo E16.CNhs10523.462-17F58.44
liver, embryo E17.CNhs10510.481-18A35.86
liver, embryo E18.CNhs10579.499-43G44.89
liver, neonate N00.CNhs11117.641-24F44.22
liver, neonate N03.CNhs11123.1345-25G22.75
liver, neonate N06.CNhs11101.684-20A812.94
liver, neonate N07.CNhs11103.716-20H22.98
liver, neonate N10.CNhs11115.751-24B91.56
liver, neonate N20.CNhs11220.823-25A33.28
liver, neonate N25.CNhs11198.1368-26H13.77
liver, neonate N30.CNhs11106.1382-42D14.34
lung, adult.CNhs10474.28-22B15.36
lung, embryo E12.CNhs10522.354-16G26.63
lung, embryo E14.CNhs10604.404-26F86.19
lung, embryo E15.CNhs11020.432-17C55.43
lung, embryo E16.CNhs10998.458-17B65.87
lung, embryo E17.CNhs10605.480-44A64.19
lung, embryo E18.CNhs10583.1287-20I68.57
lung, neonate N00.CNhs11224.640-42C65.85
lung, neonate N06.CNhs11212.683-20E57.41
lung, neonate N07.CNhs11111.715-19A35.98
lung, neonate N10.CNhs11219.750-23E66.22
lung, neonate N20.CNhs11109.822-18A47.21
lung, neonate N25.CNhs11119.1359-25C75.35
lung, neonate N30.CNhs11133.1394-42H25.50
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A11.51
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A12.18
mammary gland, adult lactating day02.CNhs10480.595-22B62.95
mammary gland, adult pregnant day19.CNhs10476.588-5H23.31
medulla oblongata, adult.CNhs10477.17-12C219.91
medulla oblongata, neonate N30.CNhs11200.1396-42A320.39
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C76.07
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C26.31
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E14.10
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E25.86
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E37.54
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D74.06
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D86.46
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D910.19
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D46.07
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D58.18
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D67.12
olfactory brain, adult.CNhs10489.18-22I915.74
ovary, adult.CNhs10507.91-2I74.26
ovary, embryo E18.CNhs11040.505-44H76.23
ovary, neonate N00.CNhs11217.1299-22I49.94
oviduct, adult pregnant day01.CNhs10500.988-6G64.78
pancreas, adult.CNhs10486.34-16E46.64
pancreas, embryo E14.CNhs11012.405-44F43.64
pancreas, embryo E15.CNhs11042.1556-45F22.42
pancreas, embryo E16.CNhs11003.460-26E53.96
pancreas, embryo E17.CNhs10599.1558-45G33.25
pancreas, embryo E18.CNhs10580.1535-43I73.07
pancreas, neonate N00.CNhs11105.645-26G96.20
pancreas, neonate N01.CNhs11138.1531-43D75.82
pancreas, neonate N02.CNhs11139.1539-43D84.28
pancreas, neonate N16.CNhs11136.787-43B62.53
pancreas, neonate N25.CNhs11094.1555-45E25.27
pancreas, neonate N30.CNhs11182.1548-44H52.06
pituitary gland, adult.CNhs10493.21-1G810.55
pituitary gland, embryo E12.CNhs11018.346-16E69.18
pituitary gland, embryo E13.CNhs11009.370-44C75.56
pituitary gland, embryo E14.CNhs11037.398-44A56.64
pituitary gland, embryo E15.CNhs10592.427-16B98.16
pituitary gland, embryo E16.CNhs11036.449-43F65.53
pituitary gland, embryo E17.CNhs11039.1265-44F510.70
pituitary gland, neonate N00.CNhs11190.1308-22E96.70
placenta, adult pregnant day10.CNhs10472.539-13I76.10
placenta, adult pregnant day17.CNhs10464.577-18G37.20
prostate, adult.CNhs10470.859-1F83.09
skin, adult.CNhs10492.30-1C311.21
skin, neonate N00.CNhs11124.650-25G48.23
skin, neonate N03.CNhs11215.662-22H35.19
skin, neonate N06.CNhs11097.693-20I55.61
skin, neonate N10.CNhs11108.762-6C48.54
small intestine, neonate N16.CNhs11114.790-21I12.91
spinal cord, adult.CNhs10505.24-13C920.21
spleen, adult.CNhs10465.25-2G24.78
spleen, embryo E16.CNhs11035.461-43C13.51
spleen, embryo E18.CNhs11011.1271-21F23.33
spleen, neonate N10.CNhs11116.752-24D17.16
spleen, neonate N20.CNhs11112.824-19H16.56
spleen, neonate N25.CNhs11099.1354-25G34.12
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C612.07
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C98.68
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D39.95
stomach, adult.CNhs10503.33-1H65.73
stomach, embryo E12.CNhs10588.356-43E35.54
stomach, embryo E15.CNhs10603.1252-16G84.88
stomach, embryo E16.CNhs11022.459-17D45.40
stomach, embryo E17.CNhs11006.1035-18D53.97
stomach, embryo E18.CNhs10999.1286-20C64.15
stomach, neonate N03.CNhs11193.1340-24B81.75
stomach, neonate N07.CNhs11210.718-18A93.22
stomach, neonate N25.CNhs11104.1355-25E44.45
stomach, neonate N30.CNhs11134.1386-42I13.24
submandibular gland, adult.CNhs10469.59-29C14.97
testis, adult.CNhs10504.57-7G56.20
testis, embryo E13.CNhs11031.389-23F55.98
testis, embryo E15.CNhs11034.443-27C59.10
testis, embryo E16.CNhs11033.470-26G57.00
testis, embryo E17.CNhs11029.486-18I56.72
testis, embryo E18.CNhs11027.503-18G58.95
testis, neonate N00.CNhs11189.1300-22B79.15
testis, neonate N07.CNhs11222.726-26I410.29
testis, neonate N10.CNhs11204.763-44D99.54
testis, neonate N20.CNhs11110.839-18H310.87
testis, neonate N30.CNhs11130.1391-42E28.06
thymus, adult.CNhs10471.38-12B53.48
thymus, embryo E14.CNhs11041.402-44I43.45
thymus, embryo E15.CNhs11005.430-45I23.90
thymus, embryo E16.CNhs11002.456-26C53.12
thymus, embryo E17.CNhs10581.478-18C12.86
thymus, embryo E18.CNhs10595.1273-19G43.97
thymus, neonate N02.CNhs11181.1541-43F83.85
thymus, neonate N03.CNhs11137.2104-43C73.54
thymus, neonate N06.CNhs11197.681-26C43.23
thymus, neonate N07.CNhs11211.713-19D33.28
thymus, neonate N10.CNhs11194.748-24E44.03
thymus, neonate N20.CNhs11186.820-7A23.22
thymus, neonate N25.CNhs11125.1362-25G73.46
thymus, neonate N30.CNhs11132.1393-42G23.04
tongue, adult.CNhs10499.32-1B47.48
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H318.87
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F716.87
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G517.46
urinary bladder, adult.CNhs10481.879-12E44.83
uterus, adult pregnant day19.CNhs10497.590-15F53.94
uterus, adult.CNhs10509.92-27E55.31
vagina, adult.CNhs10502.89-27D55.57
vesicular gland, adult.CNhs10491.51-27F85.52
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A124.85
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A225.78
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A315.47
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D713.58
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A418.50
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A529.46
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A624.98
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A717.56
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A817.22
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A922.26
whole body, embryo E11.CNhs11014.324-5I89.03
whole body, embryo E12.CNhs10587.857-27C95.99
whole body, embryo E13.CNhs10512.372-23H27.00
whole body, embryo E14.5.CNhs10578.420-27D25.35
whole body, embryo E14.CNhs10519.395-14B17.76
whole body, embryo E16.CNhs10514.453-14F28.09
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G57.11
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G57.62
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G57.70
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G57.83
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G56.84
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G56.60
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G55.34
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G56.34
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G55.80
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G56.67
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G55.68
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G56.75
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G511.13
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G57.65
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G58.23
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G56.57
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G56.91
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G58.72
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G57.91
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G58.29
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G58.60
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G59.47
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G56.79
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G56.73
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G58.07
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G55.22
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G57.37
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G57.75
whole body, embryo E17.5.CNhs10513.490-9F95.59
whole body, embryo E17.CNhs10517.475-3I55.25
whole body, embryo E18.CNhs10516.493-3B36.08
whole body, neonate N00.CNhs10525.657-19C24.94
whole body, neonate N01.CNhs10576.659-23C64.97
whole body, neonate N06.CNhs10515.692-21D17.50
whole body, neonate N10.CNhs10518.761-6B45.33





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)1.89e-0923
neuroblast (sensu Vertebrata)1.89e-0923
neuron5.22e-0833
neuronal stem cell5.22e-0833
neuroblast5.22e-0833
electrically signaling cell5.22e-0833

Uber anatomy
Ontology termp-valuen
structure with developmental contribution from neural crest3.67e-2192
regional part of nervous system2.82e-1854
neurectoderm1.60e-1764
neural plate1.60e-1764
presumptive neural plate1.60e-1764
neural tube4.57e-1752
neural rod4.57e-1752
future spinal cord4.57e-1752
neural keel4.57e-1752
ectoderm-derived structure5.22e-1795
ectoderm5.22e-1795
presumptive ectoderm5.22e-1795
ecto-epithelium1.21e-1673
nervous system2.25e-1675
central nervous system1.32e-1573
pre-chordal neural plate4.23e-1549
gray matter1.25e-1434
brain1.92e-1447
future brain1.92e-1447
anterior neural tube4.86e-1440
regional part of brain6.57e-1446
regional part of forebrain1.73e-1339
forebrain1.73e-1339
future forebrain1.73e-1339
brain grey matter4.00e-1229
regional part of telencephalon4.00e-1229
telencephalon4.00e-1229
tube1.99e-10114
anatomical conduit7.13e-10122
cerebral cortex2.43e-0821
cerebral hemisphere2.43e-0821
pallium2.43e-0821
occipital lobe1.47e-0710
visual cortex1.47e-0710
neocortex1.47e-0710
regional part of cerebral cortex2.59e-0717
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