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FFCP PHASE1:Mm9::chr7:51565583..51565612,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=243961
|EntrezGene=243961
|HGNC=
|HGNC=
|MCL_coexpression_id=1
|TSSclassifier=NA
|UniProt=D3YZU1
|UniProt=D3YZU1
|association_with_transcript=-10bp_to_ENSMUST00000107938_5end
|association_with_transcript=-10bp_to_ENSMUST00000107938_5end
|cluster_id=chr7:51565583..51565612,+
|description=CAGE_peak_1_at_Shank1_5end
|description=CAGE_peak_1_at_Shank1_5end
|id=chr7:51565583..51565612,+
|id=chr7:51565583..51565612,+
|ontology_enrichment_celltype=CL:0000117!2.21e-13!23;CL:0000337!2.21e-13!23
|ontology_enrichment_celltype=CL:0000117!2.21e-13!23;CL:0000337!2.21e-13!23
|ontology_enrichment_celltype_v019_2=CL:0000117,3.55e-17,23;CL:0000337,3.55e-17,23;CL:0000540,3.92e-09,33;CL:0000047,3.92e-09,33;CL:0000031,3.92e-09,33;CL:0000404,3.92e-09,33
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001049!5.52e-20!52;UBERON:0005068!5.52e-20!52;UBERON:0006241!5.52e-20!52;UBERON:0007135!5.52e-20!52;UBERON:0000033!1.64e-19!63;UBERON:0000955!5.19e-19!50;UBERON:0006238!5.19e-19!50;UBERON:0002616!2.40e-18!49;UBERON:0002020!4.58e-18!34;UBERON:0003056!4.71e-17!49;UBERON:0002346!5.07e-17!71;UBERON:0003075!5.07e-17!71;UBERON:0007284!5.07e-17!71;UBERON:0003080!4.58e-16!40;UBERON:0002780!1.73e-15!39;UBERON:0001890!1.73e-15!39;UBERON:0006240!1.73e-15!39;UBERON:0002791!4.61e-15!29;UBERON:0003528!4.61e-15!29;UBERON:0001893!4.61e-15!29;UBERON:0001017!5.53e-15!73;UBERON:0005743!5.53e-15!73;UBERON:0000073!5.49e-14!75;UBERON:0001016!5.49e-14!75;UBERON:0004121!1.08e-12!102;UBERON:0000924!1.08e-12!102;UBERON:0006601!1.08e-12!102;UBERON:0000956!1.34e-10!21;UBERON:0001869!1.34e-10!21;UBERON:0000203!1.34e-10!21;UBERON:0000153!4.09e-10!94;UBERON:0007811!5.26e-10!86;UBERON:0002619!1.27e-08!17;UBERON:0002021!3.12e-08!10;UBERON:0000411!3.12e-08!10;UBERON:0001950!3.12e-08!10
|ontology_enrichment_uberon_v019_2=UBERON:0000073,7.45e-28,54;UBERON:0001049,6.11e-26,52;UBERON:0005068,6.11e-26,52;UBERON:0006241,6.11e-26,52;UBERON:0007135,6.11e-26,52;UBERON:0002020,1.03e-23,34;UBERON:0002346,1.85e-23,64;UBERON:0003075,1.85e-23,64;UBERON:0007284,1.85e-23,64;UBERON:0000955,4.20e-22,47;UBERON:0006238,4.20e-22,47;UBERON:0001017,2.25e-21,73;UBERON:0002616,3.02e-21,46;UBERON:0001016,3.10e-20,75;UBERON:0003080,6.87e-20,40;UBERON:0003528,9.91e-20,29;UBERON:0002791,9.91e-20,29;UBERON:0001893,9.91e-20,29;UBERON:0003056,1.72e-19,49;UBERON:0002780,3.93e-19,39;UBERON:0001890,3.93e-19,39;UBERON:0006240,3.93e-19,39;UBERON:0010371,9.01e-19,73;UBERON:0004121,3.98e-17,95;UBERON:0000924,3.98e-17,95;UBERON:0006601,3.98e-17,95;UBERON:0000956,8.12e-14,21;UBERON:0001869,8.12e-14,21;UBERON:0000203,8.12e-14,21;UBERON:0010314,1.55e-12,92;UBERON:0002619,3.35e-11,17;UBERON:0002021,2.24e-10,10;UBERON:0000411,2.24e-10,10;UBERON:0001950,2.24e-10,10;UBERON:0002420,4.00e-07,8;UBERON:0007245,4.00e-07,8;UBERON:0010009,4.00e-07,8;UBERON:0010011,4.00e-07,8;UBERON:0000454,4.00e-07,8
|phase1_expression=0.80074423552397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.01237633694913,0,0.630924330716475,0.959801035240171,2.12194825899015,7.82398269389842,1.29078236561151,2.08959831311148,0,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194429899074283,0,0,2.01339127269284,0,0,0,0,0,13.5552028775931,10.0508286061686,7.60597684207415,0,0,0,0.988866362566974,0,0,0.384218305321555,5.08079100311541,6.88530285491622,5.8890989178387,23.4233807211119,17.0068776532742,4.89963196859816,6.99671938433125,8.27296907949019,14.3150645299205,46.7335657391787,39.3232725135983,14.1118327871307,16.8337264228434,13.022834263919,21.217907924105,29.826418331679,24.142123148736,20.9186295686304,23.3489556510529,18.4535451367048,0,0.151143120213571,0.289864488701678,0,0,0.539703191637817,0,0,0.280888840263504,0,0,0,1.26759077799012,0,0,0,0,0,0,0.91347103775248,0,0.890652834388949,0.520455980298408,0.304465478312141,0,0.753613202763113,0.23517741427141,0.125666591329675,0,0.144599356919912,0,1.7794353494215,0.441683036920787,0.484875253135222,0,26.0574909340277,27.2280718857492,0.766371165625774,0,0,0,17.2259235315546,14.1825186873774,14.3245961408665,54.5808365403748,58.3031242713154,28.0513860155406,31.474805035145,0.611036183101898,0.746441823660558,0,0.841767423545896,1.69156575851515,0.229902104433473,0.900310649026746,2.56198190320716,2.78949646520444,2.0498195245576,2.43624483855295,2.06962696591213,0.215567992932842,0.378212160335639,1.05570674498369,0.876782929710299,1.39023624612799,2.089512999133,1.85203922767149,1.59227413454795,0,0,0,0.207125772535502,0.469052119962192,0.540186184383045,1.18372367792605,0.393528463494808,1.3884040159864,0.465067889500816,0.268273401399619,0.700592054203017,0.658239399653922,0.32833492815819,0.162137619091711,0.292399974850665,0.219550115291051,0.268412837520744,45.6329188384156,15.5385964692719,0,0,1.2797295032114,1.85789337488351,1.41754207454303,1.81515172161008,0.444756087689741,0.380451252225118,0,0,0.502670417600539,0.795825888164603,0.58489226135736,0,0,0.199141273254367,0.758671603812327,0.913988100877831,1.1270773567308,0.203651327845314,0.775809948670503,0.771494018793504,0.442655759869801,1.47610147979602,0.627994911365499,0.493588655687202,0,0,0.196558995113203,0,0,0,0.25462585178142,0,0,0,0,0,0,0.252578877947112,0,0,0.184753190166605,0.568474235311454,0.325929952884052,0.678980343100753,0.469380496577004,0.167506257441816,0,0.195133647857799,0.315270288212382,0.44292937929755,0.478364305972461,0.327726629431476,0,0.144649058581512,0,0,0.491764273019036,0,12.6834966090356,15.1203075703942,0,0.504941854408746,0,0,0.215423397732799,0,0.222798674082394,0,0,0,0,34.3813808571334,0.283880170416537,3.38324646967785,1.46598263418218,1.31976098378028,7.96470830039777,0.242780636154981,0.604647113929502,0.754420319023592,1.18120757152309,1.22974059177571,0.516856586336442,0.727067458955011,1.06949213515416,1.26414703174326,0,5.15677716240934,1.02131881726136,1.08036656418786,0.258717367565509,0.214337035031592,1.59606210278046,2.67553226403106,1.48094118541909,0.608929898229199,0,0,0.220528398054962,0.49465875882444,0.161464426695906,0.663442174209714,0.835606408021955,0.328281799490123,0,10.7546675166096,0.341741761595705,1.44470807574256,0.370389054739423,0.188368457004691,0,0,0,0,0,0.954670618015114,2.37251995185852,1.82987520414164,1.40406943068342,1.88179466413022,0.655087691238533,1.75323650300267,1.48776220305605,0.26175594198403,0,0,0,0.897099276263873,0.496375471371293,0.583353565032143,0.387479470433193,0.337912250981556,0.352071715937262,0.2604087696879,0.104859344425711,0,0,0.316011120628178,0.608175645870493,0.821687657318618,0.51968329191118,0.179026695667481,0,0.360586348559907,0.443068581523732,0.201932899896295,0.15241361331,0,0.0974578807397524,0.0962118416403295,0.233753804363138,1.36038230169127,0,0,0,0.19318959403219,0.375364950902364,0.183151624267265,0.428736758158132,0,38.9678771405776,44.6515479411962,43.5400590213941,30.7617196395201,49.3259414234862,51.3667850224996,58.7269575201671,57.190792809476,48.9393801702941,41.9385852518974,0.62272408550506,1.99512436700516,3.07320490357441,3.64660075602441,2.30574478890781,4.04455718590031,3.77819437262746,4.12070114477788,4.1719497246936,4.29585259998456,3.04175159868288,2.45214243801899,3.37109426891577,3.39333307745807,3.27382173046996,2.85776214769844,3.59241410429052,4.05109362973781,4.94503080963968,4.56316652416632,1.71434626192708,2.8396128985494,4.05341522910446,2.90692833264657,3.85848459702856,3.04612588410035,1.82927972872773,2.89376682581627,3.25929873230068,1.12228454331548,3.55905054372522,3.25064791839359,2.86461730218783,4.49316839439301,4.05103883060397,9.74261253957989,3.74290573512653,1.93383948643468,1.3390183244819,1.54413993383661,0.695603506861264
|phase1_expression=0.80074423552397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.01237633694913,0,0.630924330716475,0.959801035240171,2.12194825899015,7.82398269389842,1.29078236561151,2.08959831311148,0,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194429899074283,0,0,2.01339127269284,0,0,0,0,0,13.5552028775931,10.0508286061686,7.60597684207415,0,0,0,0.988866362566974,0,0,0.384218305321555,5.08079100311541,6.88530285491622,5.8890989178387,23.4233807211119,17.0068776532742,4.89963196859816,6.99671938433125,8.27296907949019,14.3150645299205,46.7335657391787,39.3232725135983,14.1118327871307,16.8337264228434,13.022834263919,21.217907924105,29.826418331679,24.142123148736,20.9186295686304,23.3489556510529,18.4535451367048,0,0.151143120213571,0.289864488701678,0,0,0.539703191637817,0,0,0.280888840263504,0,0,0,1.26759077799012,0,0,0,0,0,0,0.91347103775248,0,0.890652834388949,0.520455980298408,0.304465478312141,0,0.753613202763113,0.23517741427141,0.125666591329675,0,0.144599356919912,0,1.7794353494215,0.441683036920787,0.484875253135222,0,26.0574909340277,27.2280718857492,0.766371165625774,0,0,0,17.2259235315546,14.1825186873774,14.3245961408665,54.5808365403748,58.3031242713154,28.0513860155406,31.474805035145,0.611036183101898,0.746441823660558,0,0.841767423545896,1.69156575851515,0.229902104433473,0.900310649026746,2.56198190320716,2.78949646520444,2.0498195245576,2.43624483855295,2.06962696591213,0.215567992932842,0.378212160335639,1.05570674498369,0.876782929710299,1.39023624612799,2.089512999133,1.85203922767149,1.59227413454795,0,0,0,0.207125772535502,0.469052119962192,0.540186184383045,1.18372367792605,0.393528463494808,1.3884040159864,0.465067889500816,0.268273401399619,0.700592054203017,0.658239399653922,0.32833492815819,0.162137619091711,0.292399974850665,0.219550115291051,0.268412837520744,45.6329188384156,15.5385964692719,0,0,1.2797295032114,1.85789337488351,1.41754207454303,1.81515172161008,0.444756087689741,0.380451252225118,0,0,0.502670417600539,0.795825888164603,0.58489226135736,0,0,0.199141273254367,0.758671603812327,0.913988100877831,1.1270773567308,0.203651327845314,0.775809948670503,0.771494018793504,0.442655759869801,1.47610147979602,0.627994911365499,0.493588655687202,0,0,0.196558995113203,0,0,0,0.25462585178142,0,0,0,0,0,0,0.252578877947112,0,0,0.184753190166605,0.568474235311454,0.325929952884052,0.678980343100753,0.469380496577004,0.167506257441816,0,0.195133647857799,0.315270288212382,0.44292937929755,0.478364305972461,0.327726629431476,0,0.144649058581512,0,0,0.491764273019036,0,12.6834966090356,15.1203075703942,0,0.504941854408746,0,0,0.215423397732799,0,0.222798674082394,0,0,0,0,34.3813808571334,0.283880170416537,3.38324646967785,1.46598263418218,1.31976098378028,7.96470830039777,0.242780636154981,0.604647113929502,0.754420319023592,1.18120757152309,1.22974059177571,0.516856586336442,0.727067458955011,1.06949213515416,1.26414703174326,0,5.15677716240934,1.02131881726136,1.08036656418786,0.258717367565509,0.214337035031592,1.59606210278046,2.67553226403106,1.48094118541909,0.608929898229199,0,0,0.220528398054962,0.49465875882444,0.161464426695906,0.663442174209714,0.835606408021955,0.328281799490123,0,10.7546675166096,0.341741761595705,1.44470807574256,0.370389054739423,0.188368457004691,0,0,0,0,0,0.954670618015114,2.37251995185852,1.82987520414164,1.40406943068342,1.88179466413022,0.655087691238533,1.75323650300267,1.48776220305605,0.26175594198403,0,0,0,0.897099276263873,0.496375471371293,0.583353565032143,0.387479470433193,0.337912250981556,0.352071715937262,0.2604087696879,0.104859344425711,0,0,0.316011120628178,0.608175645870493,0.821687657318618,0.51968329191118,0.179026695667481,0,0.360586348559907,0.443068581523732,0.201932899896295,0.15241361331,0,0.0974578807397524,0.0962118416403295,0.233753804363138,1.36038230169127,0,0,0,0.19318959403219,0.375364950902364,0.183151624267265,0.428736758158132,0,38.9678771405776,44.6515479411962,43.5400590213941,30.7617196395201,49.3259414234862,51.3667850224996,58.7269575201671,57.190792809476,48.9393801702941,41.9385852518974,0.62272408550506,1.99512436700516,3.07320490357441,3.64660075602441,2.30574478890781,4.04455718590031,3.77819437262746,4.12070114477788,4.1719497246936,4.29585259998456,3.04175159868288,2.45214243801899,3.37109426891577,3.39333307745807,3.27382173046996,2.85776214769844,3.59241410429052,4.05109362973781,4.94503080963968,4.56316652416632,1.71434626192708,2.8396128985494,4.05341522910446,2.90692833264657,3.85848459702856,3.04612588410035,1.82927972872773,2.89376682581627,3.25929873230068,1.12228454331548,3.55905054372522,3.25064791839359,2.86461730218783,4.49316839439301,4.05103883060397,9.74261253957989,3.74290573512653,1.93383948643468,1.3390183244819,1.54413993383661,0.695603506861264
|short_description=p1@Shank1
|short_description=p1@Shank1
}}
}}

Latest revision as of 19:06, 26 September 2015

Short description:p1@Shank1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Shank1_5end
Coexpression cluster:MCL_coexpression_mm9:1
Association with transcript: -10bp_to_ENSMUST00000107938_5end
EntrezGene:Shank1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Shank1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.80
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A31.01
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.63
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.96
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A62.12
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A37.82
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H21.29
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I92.09
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.23
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.19
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A22.01
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C313.56
Mouse Granule cells, donor2.CNhs12357.11731-123E310.05
Mouse Granule cells, donor3.CNhs12108.11636-122C77.61
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.99
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.38
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D55.08
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F56.89
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D95.89
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F123.42
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D517.01
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D24.90
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F27.00
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D68.27
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D314.32
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F346.73
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D739.32
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D414.11
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F416.83
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D813.02
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E421.22
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E529.83
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I624.14
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D620.92
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F623.35
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E118.45
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.15
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.29
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.54
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.28
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G61.27
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.91
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.89
adrenal gland, embryo E14.CNhs11038.406-44C50.52
adrenal gland, embryo E16.CNhs11004.1254-43D60.30
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.75
adrenal gland, neonate N00.CNhs11191.1311-23C10.24
adrenal gland, neonate N25.CNhs11223.1377-27I30.13
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.14
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F51.78
bone (os femoris), neonate N16.CNhs11225.1525-43A60.44
bone (os femoris), neonate N20.CNhs11195.1350-25C30.48
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B226.06
cerebellum, neonate N30.CNhs11135.1395-42I227.23
colon, adult.CNhs10468.36-18H70.77
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A417.23
corpus striatum, adult.CNhs10487.19-21D814.18
corpus striatum, neonate N00.CNhs11226.630-43F114.32
cortex, adult.CNhs10473.12-14D554.58
cortex, neonate N30.CNhs11107.1392-42F258.30
diencephalon, adult.CNhs10482.20-12F228.05
diencephalon, neonate N30.CNhs11201.1388-42B231.47
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.61
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.75
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.84
eyeball, embryo E12.CNhs11016.345-16C61.69
eyeball, embryo E14.CNhs10521.399-16E20.23
eyeball, embryo E15.CNhs10593.426-16C90.90
eyeball, embryo E17.CNhs11023.1261-18D42.56
eyeball, neonate N00.CNhs11207.633-15C62.79
eyeball, neonate N01.CNhs11140.1532-43E72.05
eyeball, neonate N02.CNhs11205.1551-44G82.44
eyeball, neonate N16.CNhs11188.777-19A22.07
forelimb, embryo E11.CNhs10596.335-25E20.22
forelimb, embryo E12.CNhs10600.359-14H20.38
forelimb, embryo E13.CNhs10589.384-1E21.06
forelimb, embryo E14.CNhs10577.413-26A80.88
forelimb, embryo E15.CNhs11007.437-20E71.39
forelimb, embryo E17.CNhs10598.1517-43C42.09
forelimb, embryo E18.CNhs11008.1520-43B51.85
gonad, embryo E13.CNhs11044.1564-45I61.59
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.21
heart, embryo E12.CNhs11015.353-12F50.47
heart, embryo E13.CNhs11013.376-3I90.54
heart, embryo E14.CNhs10597.403-26D41.18
heart, embryo E15.CNhs11017.431-16C80.39
heart, embryo E16.CNhs11021.457-17C61.39
heart, embryo E17.CNhs11025.479-18E50.47
heart, embryo E18.CNhs11030.1283-20G30.27
heart, neonate N00.CNhs11213.639-21E30.70
heart, neonate N03.CNhs11221.1349-25I20.66
heart, neonate N10.CNhs11118.749-24G10.33
heart, neonate N16.CNhs11209.782-15G10.16
heart, neonate N20.CNhs11127.821-26I60.29
heart, neonate N25.CNhs11196.1351-25D30.22
heart, neonate N30.CNhs11202.1390-42D20.27
hippocampus, adult.CNhs10478.13-16E845.63
hippocampus, neonate N00.CNhs11228.627-43G115.54
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I51.28
intestine, embryo E13.CNhs11010.381-16D51.86
intestine, embryo E15.CNhs10602.976-16D81.42
intestine, embryo E16.CNhs10585.463-22H41.82
intestine, embryo E17.CNhs10582.482-18D30.44
intestine, embryo E18.CNhs10526.1289-20F70.38
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.50
intestine, neonate N07.CNhs11095.720-20F20.80
intestine, neonate N10.CNhs11098.755-23A50.58
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.20
kidney, embryo E14.CNhs10606.411-4I90.76
kidney, embryo E15.CNhs10997.434-16F80.91
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I20.20
kidney, embryo E18.CNhs11001.1288-20C70.78
kidney, neonate N00.CNhs11214.646-21G70.77
kidney, neonate N10.CNhs11206.758-6D50.44
kidney, neonate N20.CNhs11113.832-19I11.48
kidney, neonate N25.CNhs11122.1353-25F30.63
kidney, neonate N30.CNhs11203.1385-42H10.49
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.20
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.25
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.25
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.18
lung, embryo E12.CNhs10522.354-16G20.57
lung, embryo E14.CNhs10604.404-26F80.33
lung, embryo E15.CNhs11020.432-17C50.68
lung, embryo E16.CNhs10998.458-17B60.47
lung, embryo E17.CNhs10605.480-44A60.17
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.20
lung, neonate N06.CNhs11212.683-20E50.32
lung, neonate N07.CNhs11111.715-19A30.44
lung, neonate N10.CNhs11219.750-23E60.48
lung, neonate N20.CNhs11109.822-18A40.33
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.14
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.49
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C212.68
medulla oblongata, neonate N30.CNhs11200.1396-42A315.12
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.50
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.22
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.22
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I934.38
ovary, adult.CNhs10507.91-2I70.28
ovary, embryo E18.CNhs11040.505-44H73.38
ovary, neonate N00.CNhs11217.1299-22I41.47
oviduct, adult pregnant day01.CNhs10500.988-6G61.32
pancreas, adult.CNhs10486.34-16E47.96
pancreas, embryo E14.CNhs11012.405-44F40.24
pancreas, embryo E15.CNhs11042.1556-45F20.60
pancreas, embryo E16.CNhs11003.460-26E50.75
pancreas, embryo E17.CNhs10599.1558-45G31.18
pancreas, embryo E18.CNhs10580.1535-43I71.23
pancreas, neonate N00.CNhs11105.645-26G90.52
pancreas, neonate N01.CNhs11138.1531-43D70.73
pancreas, neonate N02.CNhs11139.1539-43D81.07
pancreas, neonate N16.CNhs11136.787-43B61.26
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H55.16
pituitary gland, adult.CNhs10493.21-1G81.02
pituitary gland, embryo E12.CNhs11018.346-16E61.08
pituitary gland, embryo E13.CNhs11009.370-44C70.26
pituitary gland, embryo E14.CNhs11037.398-44A50.21
pituitary gland, embryo E15.CNhs10592.427-16B91.60
pituitary gland, embryo E16.CNhs11036.449-43F62.68
pituitary gland, embryo E17.CNhs11039.1265-44F51.48
pituitary gland, neonate N00.CNhs11190.1308-22E90.61
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.22
skin, adult.CNhs10492.30-1C30.49
skin, neonate N00.CNhs11124.650-25G40.16
skin, neonate N03.CNhs11215.662-22H30.66
skin, neonate N06.CNhs11097.693-20I50.84
skin, neonate N10.CNhs11108.762-6C40.33
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C910.75
spleen, adult.CNhs10465.25-2G20.34
spleen, embryo E16.CNhs11035.461-43C11.44
spleen, embryo E18.CNhs11011.1271-21F20.37
spleen, neonate N10.CNhs11116.752-24D10.19
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E32.37
stomach, embryo E15.CNhs10603.1252-16G81.83
stomach, embryo E16.CNhs11022.459-17D41.40
stomach, embryo E17.CNhs11006.1035-18D51.88
stomach, embryo E18.CNhs10999.1286-20C60.66
stomach, neonate N03.CNhs11193.1340-24B81.75
stomach, neonate N07.CNhs11210.718-18A91.49
stomach, neonate N25.CNhs11104.1355-25E40.26
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.90
testis, embryo E15.CNhs11034.443-27C50.50
testis, embryo E16.CNhs11033.470-26G50.58
testis, embryo E17.CNhs11029.486-18I50.39
testis, embryo E18.CNhs11027.503-18G50.34
testis, neonate N00.CNhs11189.1300-22B70.35
testis, neonate N07.CNhs11222.726-26I40.26
testis, neonate N10.CNhs11204.763-44D90.10
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.32
thymus, embryo E14.CNhs11041.402-44I40.61
thymus, embryo E15.CNhs11005.430-45I20.82
thymus, embryo E16.CNhs11002.456-26C50.52
thymus, embryo E17.CNhs10581.478-18C10.18
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.36
thymus, neonate N03.CNhs11137.2104-43C70.44
thymus, neonate N06.CNhs11197.681-26C40.20
thymus, neonate N07.CNhs11211.713-19D30.15
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.10
thymus, neonate N25.CNhs11125.1362-25G70.10
thymus, neonate N30.CNhs11132.1393-42G20.23
tongue, adult.CNhs10499.32-1B41.36
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.19
uterus, adult pregnant day19.CNhs10497.590-15F50.38
uterus, adult.CNhs10509.92-27E50.18
vagina, adult.CNhs10502.89-27D50.43
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A138.97
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A244.65
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A343.54
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D730.76
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A449.33
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A551.37
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A658.73
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A757.19
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A848.94
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A941.94
whole body, embryo E11.CNhs11014.324-5I80.62
whole body, embryo E12.CNhs10587.857-27C92.00
whole body, embryo E13.CNhs10512.372-23H23.07
whole body, embryo E14.5.CNhs10578.420-27D23.65
whole body, embryo E14.CNhs10519.395-14B12.31
whole body, embryo E16.CNhs10514.453-14F24.04
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G53.78
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G54.12
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G54.17
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G54.30
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G53.04
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G52.45
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G53.37
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G53.39
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G53.27
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G52.86
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G53.59
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G54.05
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G54.95
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G54.56
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.71
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G52.84
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G54.05
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G52.91
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G53.86
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G53.05
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.83
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G52.89
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G53.26
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.12
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G53.56
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G53.25
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G52.86
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G54.49
whole body, embryo E17.5.CNhs10513.490-9F94.05
whole body, embryo E17.CNhs10517.475-3I59.74
whole body, embryo E18.CNhs10516.493-3B33.74
whole body, neonate N00.CNhs10525.657-19C21.93
whole body, neonate N01.CNhs10576.659-23C61.34
whole body, neonate N06.CNhs10515.692-21D11.54
whole body, neonate N10.CNhs10518.761-6B40.70





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)3.55e-1723
neuroblast (sensu Vertebrata)3.55e-1723
neuron3.92e-0933
neuronal stem cell3.92e-0933
neuroblast3.92e-0933
electrically signaling cell3.92e-0933

Uber anatomy
Ontology termp-valuen
regional part of nervous system7.45e-2854
neural tube6.11e-2652
neural rod6.11e-2652
future spinal cord6.11e-2652
neural keel6.11e-2652
gray matter1.03e-2334
neurectoderm1.85e-2364
neural plate1.85e-2364
presumptive neural plate1.85e-2364
brain4.20e-2247
future brain4.20e-2247
central nervous system2.25e-2173
regional part of brain3.02e-2146
nervous system3.10e-2075
anterior neural tube6.87e-2040
brain grey matter9.91e-2029
regional part of telencephalon9.91e-2029
telencephalon9.91e-2029
pre-chordal neural plate1.72e-1949
regional part of forebrain3.93e-1939
forebrain3.93e-1939
future forebrain3.93e-1939
ecto-epithelium9.01e-1973
ectoderm-derived structure3.98e-1795
ectoderm3.98e-1795
presumptive ectoderm3.98e-1795
cerebral cortex8.12e-1421
cerebral hemisphere8.12e-1421
pallium8.12e-1421
structure with developmental contribution from neural crest1.55e-1292
regional part of cerebral cortex3.35e-1117
occipital lobe2.24e-1010
visual cortex2.24e-1010
neocortex2.24e-1010
basal ganglion4.00e-078
nuclear complex of neuraxis4.00e-078
aggregate regional part of brain4.00e-078
collection of basal ganglia4.00e-078
cerebral subcortex4.00e-078
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