FFCP PHASE1:Mm9::chr2:58013034..58013046,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=227929|HGNC=|MCL_coexpression_id=190|UniProt=|association_with_transcript=21bp_to_ENSMUST00000151169_5end|description=CAGE_peak_10_at_Cytip_5end|id=chr2:58013034..58013046,-|ontology_enrichment_celltype=CL:0000791!6.09e-22!9;CL:0000789!6.09e-22!9;CL:0002420!6.09e-22!9;CL:0002419!6.09e-22!9;CL:0000790!6.09e-22!9;CL:0000838!7.86e-20!12;CL:0000624!1.25e-19!8;CL:0000988!1.85e-18!32;CL:0002032!1.85e-18!32;CL:0000037!1.85e-18!32;CL:0000566!1.85e-18!32;CL:0000837!1.85e-18!32;CL:0000542!3.90e-18!13;CL:0000051!3.90e-18!13;CL:0000084!1.30e-17!11;CL:0000827!1.30e-17!11;CL:0000893!1.01e-14!6;CL:0002489!1.01e-14!6;CL:0000898!1.01e-14!6;CL:0000809!1.01e-14!6;CL:0000810!1.01e-14!6;CL:0000895!1.01e-14!6;CL:0000808!1.01e-14!6;CL:0000894!1.01e-14!6;CL:0000806!1.01e-14!6;CL:0000807!1.01e-14!6;CL:0000805!1.01e-14!6;CL:0002425!1.01e-14!6;CL:0002436!1.01e-14!6;CL:0002427!1.01e-14!6;CL:0002428!1.01e-14!6;CL:0002429!1.01e-14!6;CL:0002433!1.01e-14!6;CL:0002431!1.01e-14!6;CL:0002432!1.01e-14!6;CL:0002031!3.21e-14!25;CL:0000738!2.36e-13!17;CL:0002087!2.36e-13!17;CL:0002320!1.36e-11!46;CL:0000134!1.36e-11!46;CL:0000219!1.72e-10!54;CL:0000063!6.77e-07!66|ontology_enrichment_celltype_v019_2=CL:0000791,3.64e-29,9;CL:0000789,3.64e-29,9;CL:0002420,3.64e-29,9;CL:0002419,3.64e-29,9;CL:0000790,3.64e-29,9;CL:0000838,4.14e-28,12;CL:0000542,6.95e-26,13;CL:0000051,6.95e-26,13;CL:0000624,1.82e-24,8;CL:0000084,9.30e-24,11;CL:0000827,9.30e-24,11;CL:0000738,1.35e-19,17;CL:0002087,1.35e-19,17;CL:0000988,2.22e-15,32;CL:0002032,2.22e-15,32;CL:0000037,2.22e-15,32;CL:0000837,2.22e-15,32;CL:0000893,6.72e-15,6;CL:0002489,6.72e-15,6;CL:0000898,6.72e-15,6;CL:0000809,6.72e-15,6;CL:0000810,6.72e-15,6;CL:0000895,6.72e-15,6;CL:0000808,6.72e-15,6;CL:0000894,6.72e-15,6;CL:0000806,6.72e-15,6;CL:0000807,6.72e-15,6;CL:0000805,6.72e-15,6;CL:0002425,6.72e-15,6;CL:0002436,6.72e-15,6;CL:0002427,6.72e-15,6;CL:0002428,6.72e-15,6;CL:0002429,6.72e-15,6;CL:0002433,6.72e-15,6;CL:0002431,6.72e-15,6;CL:0002432,6.72e-15,6;CL:0002031,4.91e-13,25;CL:0002320,2.76e-10,46;CL:0000134,2.76e-10,46;CL:0000219,1.48e-08,54;CL:0000034,2.00e-07,97;CL:0000815,6.50e-07,1;CL:0000792,6.50e-07,1|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002370!1.43e-23!23;UBERON:0000974!1.43e-23!23;UBERON:0004807!1.43e-23!23;UBERON:0005058!1.43e-23!23;UBERON:0003351!1.43e-23!23;UBERON:0009113!1.43e-23!23;UBERON:0003295!1.43e-23!23;UBERON:0009722!1.43e-23!23;UBERON:0005562!1.43e-23!23;UBERON:0007690!1.43e-23!23;UBERON:0006562!1.99e-22!24;UBERON:0003408!1.99e-22!24;UBERON:0001557!1.99e-22!24;UBERON:0001042!1.99e-22!24;UBERON:0008814!1.99e-22!24;UBERON:0009145!1.99e-22!24;UBERON:0004177!3.15e-20!29;UBERON:0000072!1.67e-19!27;UBERON:0002193!5.62e-19!48;UBERON:0002390!1.57e-18!45;UBERON:0003061!1.57e-18!45;UBERON:0000063!3.61e-14!35;UBERON:0000065!4.34e-13!41;UBERON:0001004!1.11e-12!42;UBERON:0002384!1.36e-11!46;UBERON:0002405!2.25e-11!70;UBERON:0005057!9.13e-10!51;UBERON:0003081!6.39e-09!88;UBERON:0003929!1.12e-07!55;UBERON:0002530!6.99e-07!65;UBERON:0002368!9.63e-07!60|ontology_enrichment_uberon_v019_2=UBERON:0002370,1.06e-13,23;UBERON:0000974,1.06e-13,23;UBERON:0004807,1.06e-13,23;UBERON:0005058,1.06e-13,23;UBERON:0003351,1.06e-13,23;UBERON:0009113,1.06e-13,23;UBERON:0003295,1.06e-13,23;UBERON:0009722,1.06e-13,23;UBERON:0005562,1.06e-13,23;UBERON:0007690,1.06e-13,23;UBERON:0006562,4.31e-13,24;UBERON:0003408,4.31e-13,24;UBERON:0001557,4.31e-13,24;UBERON:0001042,4.31e-13,24;UBERON:0008814,4.31e-13,24;UBERON:0009145,4.31e-13,24;UBERON:0000072,1.54e-11,27;UBERON:0004177,1.12e-10,29;UBERON:0005057,1.12e-10,29;UBERON:0002384,2.76e-10,46;UBERON:0000077,1.09e-08,35;UBERON:0007811,2.02e-08,36;UBERON:0000065,2.81e-07,41;UBERON:0001004,4.41e-07,42;UBERON:0000153,6.78e-07,43|phase1_expression=0,0,0,0,0,0,0,10.2007425518845,2.67498572088167,10.5329036844897,0.34243593645101,0.159544317990673,2.9104124088305,2.36035086531293,0,0.404950534779652,0,0.788655413395594,0,0.42438965179803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.67782606057736,3.62681071005672,2.01656279485478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151452386666368,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0.776813650941515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.07833612055328,1.19980546198682,0.381210681219194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257347907114715,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146199987425332,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157635144106191,0,0,0,0,0,0,0,0.491764273019036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.228778173206523,2.37969801991397,1.11961161858926,2.07299960706636,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117357238645754,0,0,0,0,0.948033361884535,0,0,0,0,0.39736270956253,0.600977247599844,1.03382669022204,0.605798699688886,0.304827226619999,1.10908803650525,1.55932609183604,0.962118416403295,1.28564592399726,0,0,0,0,0,0.187682475451182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p10@Cytip}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=227929 | |||
|HGNC= | |||
|MCL_coexpression_id=190 | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=21bp_to_ENSMUST00000151169_5end | |||
|cluster_id=chr2:58013034..58013046,- | |||
|description=CAGE_peak_10_at_Cytip_5end | |||
|id=chr2:58013034..58013046,- | |||
|ontology_enrichment_celltype=CL:0000791!6.09e-22!9;CL:0000789!6.09e-22!9;CL:0002420!6.09e-22!9;CL:0002419!6.09e-22!9;CL:0000790!6.09e-22!9;CL:0000838!7.86e-20!12;CL:0000624!1.25e-19!8;CL:0000988!1.85e-18!32;CL:0002032!1.85e-18!32;CL:0000037!1.85e-18!32;CL:0000566!1.85e-18!32;CL:0000837!1.85e-18!32;CL:0000542!3.90e-18!13;CL:0000051!3.90e-18!13;CL:0000084!1.30e-17!11;CL:0000827!1.30e-17!11;CL:0000893!1.01e-14!6;CL:0002489!1.01e-14!6;CL:0000898!1.01e-14!6;CL:0000809!1.01e-14!6;CL:0000810!1.01e-14!6;CL:0000895!1.01e-14!6;CL:0000808!1.01e-14!6;CL:0000894!1.01e-14!6;CL:0000806!1.01e-14!6;CL:0000807!1.01e-14!6;CL:0000805!1.01e-14!6;CL:0002425!1.01e-14!6;CL:0002436!1.01e-14!6;CL:0002427!1.01e-14!6;CL:0002428!1.01e-14!6;CL:0002429!1.01e-14!6;CL:0002433!1.01e-14!6;CL:0002431!1.01e-14!6;CL:0002432!1.01e-14!6;CL:0002031!3.21e-14!25;CL:0000738!2.36e-13!17;CL:0002087!2.36e-13!17;CL:0002320!1.36e-11!46;CL:0000134!1.36e-11!46;CL:0000219!1.72e-10!54;CL:0000063!6.77e-07!66 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,3.64e-29,9;CL:0000789,3.64e-29,9;CL:0002420,3.64e-29,9;CL:0002419,3.64e-29,9;CL:0000790,3.64e-29,9;CL:0000838,4.14e-28,12;CL:0000542,6.95e-26,13;CL:0000051,6.95e-26,13;CL:0000624,1.82e-24,8;CL:0000084,9.30e-24,11;CL:0000827,9.30e-24,11;CL:0000738,1.35e-19,17;CL:0002087,1.35e-19,17;CL:0000988,2.22e-15,32;CL:0002032,2.22e-15,32;CL:0000037,2.22e-15,32;CL:0000837,2.22e-15,32;CL:0000893,6.72e-15,6;CL:0002489,6.72e-15,6;CL:0000898,6.72e-15,6;CL:0000809,6.72e-15,6;CL:0000810,6.72e-15,6;CL:0000895,6.72e-15,6;CL:0000808,6.72e-15,6;CL:0000894,6.72e-15,6;CL:0000806,6.72e-15,6;CL:0000807,6.72e-15,6;CL:0000805,6.72e-15,6;CL:0002425,6.72e-15,6;CL:0002436,6.72e-15,6;CL:0002427,6.72e-15,6;CL:0002428,6.72e-15,6;CL:0002429,6.72e-15,6;CL:0002433,6.72e-15,6;CL:0002431,6.72e-15,6;CL:0002432,6.72e-15,6;CL:0002031,4.91e-13,25;CL:0002320,2.76e-10,46;CL:0000134,2.76e-10,46;CL:0000219,1.48e-08,54;CL:0000034,2.00e-07,97;CL:0000815,6.50e-07,1;CL:0000792,6.50e-07,1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002370!1.43e-23!23;UBERON:0000974!1.43e-23!23;UBERON:0004807!1.43e-23!23;UBERON:0005058!1.43e-23!23;UBERON:0003351!1.43e-23!23;UBERON:0009113!1.43e-23!23;UBERON:0003295!1.43e-23!23;UBERON:0009722!1.43e-23!23;UBERON:0005562!1.43e-23!23;UBERON:0007690!1.43e-23!23;UBERON:0006562!1.99e-22!24;UBERON:0003408!1.99e-22!24;UBERON:0001557!1.99e-22!24;UBERON:0001042!1.99e-22!24;UBERON:0008814!1.99e-22!24;UBERON:0009145!1.99e-22!24;UBERON:0004177!3.15e-20!29;UBERON:0000072!1.67e-19!27;UBERON:0002193!5.62e-19!48;UBERON:0002390!1.57e-18!45;UBERON:0003061!1.57e-18!45;UBERON:0000063!3.61e-14!35;UBERON:0000065!4.34e-13!41;UBERON:0001004!1.11e-12!42;UBERON:0002384!1.36e-11!46;UBERON:0002405!2.25e-11!70;UBERON:0005057!9.13e-10!51;UBERON:0003081!6.39e-09!88;UBERON:0003929!1.12e-07!55;UBERON:0002530!6.99e-07!65;UBERON:0002368!9.63e-07!60 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,1.06e-13,23;UBERON:0000974,1.06e-13,23;UBERON:0004807,1.06e-13,23;UBERON:0005058,1.06e-13,23;UBERON:0003351,1.06e-13,23;UBERON:0009113,1.06e-13,23;UBERON:0003295,1.06e-13,23;UBERON:0009722,1.06e-13,23;UBERON:0005562,1.06e-13,23;UBERON:0007690,1.06e-13,23;UBERON:0006562,4.31e-13,24;UBERON:0003408,4.31e-13,24;UBERON:0001557,4.31e-13,24;UBERON:0001042,4.31e-13,24;UBERON:0008814,4.31e-13,24;UBERON:0009145,4.31e-13,24;UBERON:0000072,1.54e-11,27;UBERON:0004177,1.12e-10,29;UBERON:0005057,1.12e-10,29;UBERON:0002384,2.76e-10,46;UBERON:0000077,1.09e-08,35;UBERON:0007811,2.02e-08,36;UBERON:0000065,2.81e-07,41;UBERON:0001004,4.41e-07,42;UBERON:0000153,6.78e-07,43 | |||
|phase1_expression=0,0,0,0,0,0,0,10.2007425518845,2.67498572088167,10.5329036844897,0.34243593645101,0.159544317990673,2.9104124088305,2.36035086531293,0,0.404950534779652,0,0.788655413395594,0,0.42438965179803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.67782606057736,3.62681071005672,2.01656279485478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151452386666368,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0.776813650941515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.07833612055328,1.19980546198682,0.381210681219194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257347907114715,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146199987425332,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157635144106191,0,0,0,0,0,0,0,0.491764273019036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.228778173206523,2.37969801991397,1.11961161858926,2.07299960706636,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117357238645754,0,0,0,0,0.948033361884535,0,0,0,0,0.39736270956253,0.600977247599844,1.03382669022204,0.605798699688886,0.304827226619999,1.10908803650525,1.55932609183604,0.962118416403295,1.28564592399726,0,0,0,0,0,0.187682475451182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p10@Cytip | |||
}} |
Latest revision as of 19:12, 26 September 2015
Short description: | p10@Cytip |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_10_at_Cytip_5end |
Coexpression cluster: | MCL_coexpression_mm9:190 |
Association with transcript: | 21bp_to_ENSMUST00000151169_5end |
EntrezGene: | Cytip |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
thymus | 1.06e-13 | 23 |
neck | 1.06e-13 | 23 |
respiratory system epithelium | 1.06e-13 | 23 |
hemolymphoid system gland | 1.06e-13 | 23 |
pharyngeal epithelium | 1.06e-13 | 23 |
thymic region | 1.06e-13 | 23 |
pharyngeal gland | 1.06e-13 | 23 |
entire pharyngeal arch endoderm | 1.06e-13 | 23 |
thymus primordium | 1.06e-13 | 23 |
early pharyngeal endoderm | 1.06e-13 | 23 |
pharynx | 4.31e-13 | 24 |
gland of gut | 4.31e-13 | 24 |
upper respiratory tract | 4.31e-13 | 24 |
chordate pharynx | 4.31e-13 | 24 |
pharyngeal arch system | 4.31e-13 | 24 |
pharyngeal region of foregut | 4.31e-13 | 24 |
segment of respiratory tract | 1.54e-11 | 27 |
hemopoietic organ | 1.12e-10 | 29 |
immune organ | 1.12e-10 | 29 |
connective tissue | 2.76e-10 | 46 |
mixed endoderm/mesoderm-derived structure | 1.09e-08 | 35 |
craniocervical region | 2.02e-08 | 36 |
respiratory tract | 2.81e-07 | 41 |
respiratory system | 4.41e-07 | 42 |
anterior region of body | 6.78e-07 | 43 |