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FFCP PHASE1:Mm9::chr9:50412012..50412057,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=30057
|EntrezGene=30057
|HGNC=
|HGNC=
|MCL_coexpression_id=3070
|MCL_coexpression_id=3070
|TSSclassifier=NA
|UniProt=P62077
|UniProt=P62077
|association_with_transcript=6bp_to_ENSMUST00000044051,NM_013897,uc009pjw.2,uc009pjx.2_5end
|association_with_transcript=6bp_to_ENSMUST00000044051,NM_013897,uc009pjw.2,uc009pjx.2_5end
|cluster_id=chr9:50412012..50412057,+
|description=CAGE_peak_1_at_Timm8b_5end
|description=CAGE_peak_1_at_Timm8b_5end
|id=chr9:50412012..50412057,+
|id=chr9:50412012..50412057,+
|ontology_enrichment_celltype=CL:0000117!5.66e-09!23;CL:0000337!5.66e-09!23;CL:0000221!9.74e-07!44;CL:0000133!9.74e-07!44
|ontology_enrichment_celltype=CL:0000117!5.66e-09!23;CL:0000337!5.66e-09!23;CL:0000221!9.74e-07!44;CL:0000133!9.74e-07!44
|ontology_enrichment_celltype_v019_2=CL:0000117,5.66e-09,23;CL:0000337,5.66e-09,23;CL:0000221,9.74e-07,44;CL:0000133,9.74e-07,44
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
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|ontology_enrichment_uberon=UBERON:0001049!9.30e-17!52;UBERON:0005068!9.30e-17!52;UBERON:0006241!9.30e-17!52;UBERON:0007135!9.30e-17!52;UBERON:0000955!7.42e-16!50;UBERON:0006238!7.42e-16!50;UBERON:0002616!1.20e-15!49;UBERON:0001017!1.50e-15!73;UBERON:0005743!1.50e-15!73;UBERON:0000073!1.92e-15!75;UBERON:0001016!1.92e-15!75;UBERON:0002020!7.26e-15!34;UBERON:0000033!2.43e-14!63;UBERON:0002346!6.84e-14!71;UBERON:0003075!6.84e-14!71;UBERON:0007284!6.84e-14!71;UBERON:0002791!3.35e-13!29;UBERON:0003528!3.35e-13!29;UBERON:0001893!3.35e-13!29;UBERON:0003080!1.62e-12!40;UBERON:0002780!4.27e-12!39;UBERON:0001890!4.27e-12!39;UBERON:0006240!4.27e-12!39;UBERON:0000025!1.71e-11!114;UBERON:0004111!3.82e-11!122;UBERON:0003056!6.15e-11!49;UBERON:0004121!8.37e-11!102;UBERON:0000924!8.37e-11!102;UBERON:0006601!8.37e-11!102;UBERON:0000956!1.16e-09!21;UBERON:0001869!1.16e-09!21;UBERON:0000203!1.16e-09!21;UBERON:0002619!1.27e-08!17;UBERON:0002021!1.76e-07!10;UBERON:0000411!1.76e-07!10;UBERON:0001950!1.76e-07!10;UBERON:0003103!2.26e-07!43
|ontology_enrichment_uberon_v019_2=UBERON:0010314,3.14e-19,92;UBERON:0000073,1.83e-17,54;UBERON:0001049,9.30e-17,52;UBERON:0005068,9.30e-17,52;UBERON:0006241,9.30e-17,52;UBERON:0007135,9.30e-17,52;UBERON:0001017,1.50e-15,73;UBERON:0001016,1.92e-15,75;UBERON:0002020,7.26e-15,34;UBERON:0000955,1.12e-14,47;UBERON:0006238,1.12e-14,47;UBERON:0002616,1.79e-14,46;UBERON:0002346,2.20e-14,64;UBERON:0003075,2.20e-14,64;UBERON:0007284,2.20e-14,64;UBERON:0003528,3.35e-13,29;UBERON:0002791,3.35e-13,29;UBERON:0001893,3.35e-13,29;UBERON:0003080,1.62e-12,40;UBERON:0002780,4.27e-12,39;UBERON:0001890,4.27e-12,39;UBERON:0006240,4.27e-12,39;UBERON:0000025,1.71e-11,114;UBERON:0004111,3.82e-11,122;UBERON:0003056,6.15e-11,49;UBERON:0004121,7.67e-11,95;UBERON:0000924,7.67e-11,95;UBERON:0006601,7.67e-11,95;UBERON:0010371,2.20e-10,73;UBERON:0000956,1.16e-09,21;UBERON:0001869,1.16e-09,21;UBERON:0000203,1.16e-09,21;UBERON:0002619,1.27e-08,17;UBERON:0002021,1.76e-07,10;UBERON:0000411,1.76e-07,10;UBERON:0001950,1.76e-07,10;UBERON:0003103,2.26e-07,43
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750913629044,97.8528387845519,103.707794823176,117.260696731697,99.9344806711521,75.7105654444077,125.38109621035,116.39424601603,109.355719103299,819.609532846813,78.1971535810009,126.244828218765,89.4475466382619,100.615502489153,102.894280423884,67.7151266986,82.6797843759083,98.4629244157425,271.540551808431,403.242008761012,63.5182352462638,107.849814534367,111.133255652343,100.298875338858,87.006974094396,68.1477046899739,62.3814383008638,69.1186987177021,72.5948775127181,60.5082044840699,66.0411512646305,60.228970297167,63.4998154826174,63.9316654933182,131.276892113207,88.3504094428777,76.3464919746638,92.000769767515,79.0145439591659,100.222441890931,73.260649706906,55.9501469396362,91.7876950384715,217.994211250188,237.067496801196,229.731100889198,216.70686293539,240.463964439495,239.459865472535,235.5828525809,215.253535141177,236.993479898739,197.266678777443,141.462154757233,117.313312779903,106.708503596334,82.8993905202883,116.125692095902,120.969028560109,104.900455522362,91.8916355285468,111.679884937952,107.14361778785,103.419554355218,95.4449287413546,96.1698281715692,84.3211257172128,81.5583659169708,77.1595779878579,86.3338228289173,92.210607381651,109.61484961368,100.242464611525,124.11866936352,102.581015960097,97.2819654985069,111.044662307099,96.4621149257139,102.552904764712,96.9518256225695,133.113273987548,97.9147660828663,116.71759250481,97.1620798436986,85.9944131138669,103.535453921931,91.5676731409059,87.1937881634759,69.447340666749,85.3850370825741,66.6100267549725,71.7331245258163,89.1189333242843,137.26575868729
|phase1_expression=110.182406808098,139.590163055744,111.019814411047,80.7579444189236,91.6639185801815,80.4141712457952,98.1173090501208,51.3910827297474,72.3654031859567,70.45342242292,133.036361311217,122.849124852818,46.566598541288,47.2070173062586,80.6125623593904,92.7336724645403,84.6469872535057,66.0893236425508,58.273634282439,72.1462408056651,166.854935276399,110.907992491389,143.659884026414,115.834514102426,130.992699489354,192.367707978532,175.750894432902,154.061931370411,170.451007252367,158.274921489237,200.887842653706,60.9629446521246,41.8244055557508,31.6963362030877,115.251796280759,132.655246996077,119.030734700961,89.9843006084352,145.328374081427,132.975030969345,122.352149510451,119.532959867728,124.290650375975,92.911851665976,79.783644869758,103.887461723512,184.644357266137,158.068238375824,161.029971944368,133.767770563107,117.72858058693,126.502256641175,42.2812167265496,23.211588544363,18.1490651536931,90.5553214846533,78.7966959831581,101.587402178656,165.090232061432,155.523347905978,160.359345087063,188.058715298368,130.726335028337,108.437915932409,95.9200371689965,93.0728950579391,109.354040339218,111.423308543251,127.123464690194,143.646318384919,145.544873255156,188.815300690914,218.659855542097,157.400676991216,135.621341490804,131.448286485233,146.454121729187,165.865852172659,169.120793115124,167.363699129616,146.014279189446,178.673286100969,262.152836062297,248.741073634003,194.817765915433,124.922520240835,136.392070205541,153.033945022572,124.645314226421,97.260597857433,59.4222201838439,195.316220074775,167.952919425814,152.196300041864,133.204165576772,112.006721774334,168.39285973797,64.4226619345058,92.4838176386213,83.03480000993,124.787269922139,48.7640614174408,33.1246811618639,14.2213340630666,150.894255584816,150.242400226733,144.074466829213,141.131275332758,34.1798006414267,88.0261884654411,109.642726516198,137.618396197088,123.148675534735,163.534064999595,76.5502483453438,100.156273289751,79.349584642734,107.292722834574,81.3841707793884,91.5600370702336,91.2075471241425,100.369177398991,117.426809567417,130.58023546715,110.587861197504,109.846533739694,71.2899990810226,119.980546198682,78.2752598770079,168.065097412211,197.182759814828,127.66482174667,202.505333024002,190.508015711096,174.126381340911,207.831057989798,58.1502767585306,98.1570998113634,231.999492242113,85.8602772016814,121.27225284124,143.229011062054,119.381192060947,120.111739815065,72.8670905910721,92.8824472065161,91.6402866194148,116.675220203296,101.101388685503,82.0720387928336,82.1691749845641,89.6510545628781,75.9068990385882,55.7203466435466,70.7890549243325,103.099750211979,110.949683595491,120.953516343916,69.6200573519202,123.446960431159,124.06428573,159.354924392998,106.061641542174,148.163466505795,164.911543676607,182.771680573821,177.865265127948,164.288836710607,168.838406011231,208.328511916372,199.186065054168,249.270978560192,251.823982238835,260.226245976361,181.90080550797,116.899639662867,122.585368486989,135.663140698398,110.483313777251,104.506502337197,85.9545967018363,108.505736247358,131.870180000008,151.419598385597,95.3803413704468,144.93508015713,103.801441234511,92.1168465550528,94.7525463398924,89.8819408654222,122.117998179202,88.8170078714478,141.681922011952,102.480915810927,82.2766470413487,112.211881642768,134.021168632829,94.9639001314913,111.296305338693,150.119520495255,194.050427611939,199.40981689763,160.380871254148,96.9370064210506,105.159062385564,97.5901567750265,113.398807856173,107.565013249578,143.863606256502,114.503062705423,70.3666884203653,141.67368920505,54.6319184803947,107.920874823866,147.905857056302,133.361647556075,160.201890275068,90.2169384949497,59.3057740434801,116.916201062389,65.3489555532524,89.285915117749,80.2640649146677,59.2972151344028,66.6522194480838,53.0763522173213,56.2757464459102,51.158343308867,38.4285992464544,56.3689802622139,64.7568681997108,62.19909519005,73.8877291302434,75.6028900508006,151.955160362882,71.191680546621,198.922180994874,217.310466941945,78.3609038900508,238.837497135337,103.802204187948,114.788990823212,82.0763145361964,87.9405176465391,82.4355094104858,67.9383673893198,94.7257041919253,99.9515034056687,83.801008924663,134.312310264315,85.589871380586,64.6378141312136,48.0516530093049,60.7090052538931,67.7000205533811,118.234169807476,113.069010304817,111.842812295248,71.7583599700278,82.7000547969165,58.6632225491862,52.3488570447608,72.3689678120984,71.1082705355586,87.497445117249,66.0067476788396,78.641548929125,130.5442931727,129.746759834103,115.527661882028,113.85242999834,108.804978737263,114.526118339076,64.5465692122951,78.8496939094067,72.8702323771541,156.795691017078,53.4231459530395,47.6320058752921,52.0500542129985,40.3478522730601,35.9468570441684,92.9823868849224,182.273071876331,64.930934703184,66.6629583521209,73.7074218931453,78.1729096569468,57.5482698705516,64.0578884978263,41.134780058513,43.6648531249813,40.0779924032829,181.387417422872,86.5178942444405,71.9750913629044,97.8528387845519,103.707794823176,117.260696731697,99.9344806711521,75.7105654444077,125.38109621035,116.39424601603,109.355719103299,819.609532846813,78.1971535810009,126.244828218765,89.4475466382619,100.615502489153,102.894280423884,67.7151266986,82.6797843759083,98.4629244157425,271.540551808431,403.242008761012,63.5182352462638,107.849814534367,111.133255652343,100.298875338858,87.006974094396,68.1477046899739,62.3814383008638,69.1186987177021,72.5948775127181,60.5082044840699,66.0411512646305,60.228970297167,63.4998154826174,63.9316654933182,131.276892113207,88.3504094428777,76.3464919746638,92.000769767515,79.0145439591659,100.222441890931,73.260649706906,55.9501469396362,91.7876950384715,217.994211250188,237.067496801196,229.731100889198,216.70686293539,240.463964439495,239.459865472535,235.5828525809,215.253535141177,236.993479898739,197.266678777443,141.462154757233,117.313312779903,106.708503596334,82.8993905202883,116.125692095902,120.969028560109,104.900455522362,91.8916355285468,111.679884937952,107.14361778785,103.419554355218,95.4449287413546,96.1698281715692,84.3211257172128,81.5583659169708,77.1595779878579,86.3338228289173,92.210607381651,109.61484961368,100.242464611525,124.11866936352,102.581015960097,97.2819654985069,111.044662307099,96.4621149257139,102.552904764712,96.9518256225695,133.113273987548,97.9147660828663,116.71759250481,97.1620798436986,85.9944131138669,103.535453921931,91.5676731409059,87.1937881634759,69.447340666749,85.3850370825741,66.6100267549725,71.7331245258163,89.1189333242843,137.26575868729
|short_description=p1@Timm8b
|short_description=p1@Timm8b
}}
}}

Latest revision as of 19:27, 26 September 2015

Short description:p1@Timm8b
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Timm8b_5end
Coexpression cluster:MCL_coexpression_mm9:3070
Association with transcript: 6bp_to_ENSMUST00000044051, NM_013897, uc009pjw.2, uc009pjx.2_5end
EntrezGene:Timm8b
Link to Zenbu:ZENBU


View on UCSC genome browser

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CAGE Expression

Sample

p1@Timm8b

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G7110.18
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I5139.59
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I6111.02
CD326+ enterocyte, pool1.CNhs13542.11848-124I380.76
CD326+ enterocyte, pool2.CNhs13197.11849-124I491.66
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I780.41
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I898.12
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E951.39
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E772.37
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F270.45
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E6133.04
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F1122.85
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E446.57
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E847.21
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A180.61
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A392.73
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A584.65
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A266.09
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A458.27
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A672.15
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A3166.85
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H2110.91
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I9143.66
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D1115.83
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D2130.99
GP2+ M cell, pool1.CNhs13228.11845-124H9192.37
GP2+ M cell, pool2.CNhs13231.11846-124I1175.75
GP2+ M cell, pool3.CNhs13240.11847-124I2154.06
Ileum epithelium, pool1.CNhs13199.10252-104B9170.45
Ileum epithelium, pool2.CNhs13232.10253-104C1158.27
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C8200.89
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I360.96
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G641.82
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E931.70
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F5115.25
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F6132.66
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F7119.03
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G889.98
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H1145.33
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H3132.98
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G9122.35
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H2119.53
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H4124.29
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D892.91
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D979.78
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B3103.89
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B7184.64
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C2158.07
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B8161.03
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C3133.77
Mouse Astrocytes, donor2.CNhs12078.11552-120C4117.73
Mouse Astrocytes, donor3.CNhs12107.11633-122C4126.50
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A242.28
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I923.21
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A118.15
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C190.56
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E178.80
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C5101.59
Mouse Granule cells, donor1.CNhs12131.11713-123C3165.09
Mouse Granule cells, donor2.CNhs12357.11731-123E3155.52
Mouse Granule cells, donor3.CNhs12108.11636-122C7160.36
Mouse Meningeal cells, donor1.CNhs12132.11716-123C6188.06
Mouse Meningeal cells, donor3.CNhs12109.11639-122D1130.73
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C7108.44
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E795.92
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D293.07
Mouse Microglia, donor1.CNhs12629.11718-123C8109.35
Mouse Microglia, donor2.CNhs12634.11736-123E8111.42
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D5127.12
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F5143.65
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D9145.54
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F1188.82
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D5218.66
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D2157.40
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F2135.62
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D6131.45
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D3146.45
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F3165.87
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D7169.12
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D4167.36
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F4146.01
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D8178.67
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E4262.15
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E5248.74
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I6194.82
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D6124.92
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F6136.39
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E1153.03
Mouse Schwann, donor1.CNhs12507.11728-123D9124.65
Mouse Schwann, donor2.CNhs12573.11746-123F997.26
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G359.42
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F7195.32
Mouse hepatocyte, donor1.CNhs13078.11714-123C4167.95
Mouse hepatocyte, donor3.CNhs12615.11637-122C8152.20
Mouse hepatocyte, donor6.CNhs13090.11822-124F4133.20
Mouse hepatocyte, donor8.CNhs13091.11824-124F6112.01
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A7168.39
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I764.42
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E392.48
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I883.03
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G6124.79
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H148.76
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I833.12
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B614.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G1150.89
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G2150.24
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G3144.07
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B6141.13
accessory axillary lymph node, adult.CNhs10475.1063-29H934.18
adrenal gland, adult.CNhs10508.49-24D788.03
adrenal gland, embryo E14.CNhs11038.406-44C5109.64
adrenal gland, embryo E16.CNhs11004.1254-43D6137.62
adrenal gland, embryo E17.CNhs11043.1263-45I1123.15
adrenal gland, embryo E18.CNhs11026.1262-18F5163.53
adrenal gland, neonate N00.CNhs11191.1311-23C176.55
adrenal gland, neonate N25.CNhs11223.1377-27I3100.16
amnion, adult pregnant day17.5.CNhs10488.583-22A879.35
aorta, adult.CNhs10498.46-23H1107.29
bone (os femoris), adult.CNhs10483.56-12G281.38
bone (os femoris), neonate N02.CNhs11227.1985-43F591.56
bone (os femoris), neonate N16.CNhs11225.1525-43A691.21
bone (os femoris), neonate N20.CNhs11195.1350-25C3100.37
cecum, adult.CNhs10467.37-13H4117.43
cerebellum, adult.CNhs10494.15-8B2130.58
cerebellum, neonate N30.CNhs11135.1395-42I2110.59
colon, adult.CNhs10468.36-18H7109.85
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C771.29
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D1119.98
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D478.28
corpora quadrigemina, adult.CNhs10501.16-22A4168.07
corpus striatum, adult.CNhs10487.19-21D8197.18
corpus striatum, neonate N00.CNhs11226.630-43F1127.66
cortex, adult.CNhs10473.12-14D5202.51
cortex, neonate N30.CNhs11107.1392-42F2190.51
diencephalon, adult.CNhs10482.20-12F2174.13
diencephalon, neonate N30.CNhs11201.1388-42B2207.83
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B158.15
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A298.16
epididymis, adult.CNhs10490.58-23B2232.00
eyeball, adult.CNhs10484.31-12G485.86
eyeball, embryo E12.CNhs11016.345-16C6121.27
eyeball, embryo E14.CNhs10521.399-16E2143.23
eyeball, embryo E15.CNhs10593.426-16C9119.38
eyeball, embryo E17.CNhs11023.1261-18D4120.11
eyeball, neonate N00.CNhs11207.633-15C672.87
eyeball, neonate N01.CNhs11140.1532-43E792.88
eyeball, neonate N02.CNhs11205.1551-44G891.64
eyeball, neonate N16.CNhs11188.777-19A2116.68
forelimb, embryo E11.CNhs10596.335-25E2101.10
forelimb, embryo E12.CNhs10600.359-14H282.07
forelimb, embryo E13.CNhs10589.384-1E282.17
forelimb, embryo E14.CNhs10577.413-26A889.65
forelimb, embryo E15.CNhs11007.437-20E775.91
forelimb, embryo E17.CNhs10598.1517-43C455.72
forelimb, embryo E18.CNhs11008.1520-43B570.79
gonad, embryo E13.CNhs11044.1564-45I6103.10
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C8110.95
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D2120.95
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D569.62
heart, embryo E11.CNhs10586.331-24E9123.45
heart, embryo E12.CNhs11015.353-12F5124.06
heart, embryo E13.CNhs11013.376-3I9159.35
heart, embryo E14.CNhs10597.403-26D4106.06
heart, embryo E15.CNhs11017.431-16C8148.16
heart, embryo E16.CNhs11021.457-17C6164.91
heart, embryo E17.CNhs11025.479-18E5182.77
heart, embryo E18.CNhs11030.1283-20G3177.87
heart, neonate N00.CNhs11213.639-21E3164.29
heart, neonate N03.CNhs11221.1349-25I2168.84
heart, neonate N10.CNhs11118.749-24G1208.33
heart, neonate N16.CNhs11209.782-15G1199.19
heart, neonate N20.CNhs11127.821-26I6249.27
heart, neonate N25.CNhs11196.1351-25D3251.82
heart, neonate N30.CNhs11202.1390-42D2260.23
hippocampus, adult.CNhs10478.13-16E8181.90
hippocampus, neonate N00.CNhs11228.627-43G1116.90
intestinal mucosa, adult.CNhs10506.860-29I3122.59
intestine, adult.CNhs10496.178-9A3135.66
intestine, embryo E12.CNhs11019.1251-16I5110.48
intestine, embryo E13.CNhs11010.381-16D5104.51
intestine, embryo E15.CNhs10602.976-16D885.95
intestine, embryo E16.CNhs10585.463-22H4108.51
intestine, embryo E17.CNhs10582.482-18D3131.87
intestine, embryo E18.CNhs10526.1289-20F7151.42
intestine, neonate N00.CNhs11126.644-26D195.38
intestine, neonate N01.CNhs11192.1322-23E9144.94
intestine, neonate N06.CNhs11102.688-20B8103.80
intestine, neonate N07.CNhs11095.720-20F292.12
intestine, neonate N10.CNhs11098.755-23A594.75
intestine, neonate N20.CNhs11187.827-18D189.88
intestine, neonate N25.CNhs11121.1352-25E3122.12
intestine, neonate N30.CNhs11131.1384-42G188.82
kidney, embryo E14.CNhs10606.411-4I9141.68
kidney, embryo E15.CNhs10997.434-16F8102.48
kidney, embryo E16.CNhs10584.464-22A582.28
kidney, embryo E17.CNhs11028.483-18I2112.21
kidney, embryo E18.CNhs11001.1288-20C7134.02
kidney, neonate N00.CNhs11214.646-21G794.96
kidney, neonate N10.CNhs11206.758-6D5111.30
kidney, neonate N20.CNhs11113.832-19I1150.12
kidney, neonate N25.CNhs11122.1353-25F3194.05
kidney, neonate N30.CNhs11203.1385-42H1199.41
liver, adult pregnant day01.CNhs10466.508-5B2160.38
liver, embryo E12.CNhs10601.355-15F896.94
liver, embryo E13.CNhs10524.378-3H6105.16
liver, embryo E14.CNhs10594.409-16E197.59
liver, embryo E15.CNhs10520.433-16D7113.40
liver, embryo E16.CNhs10523.462-17F5107.57
liver, embryo E17.CNhs10510.481-18A3143.86
liver, embryo E18.CNhs10579.499-43G4114.50
liver, neonate N00.CNhs11117.641-24F470.37
liver, neonate N03.CNhs11123.1345-25G2141.67
liver, neonate N06.CNhs11101.684-20A854.63
liver, neonate N07.CNhs11103.716-20H2107.92
liver, neonate N10.CNhs11115.751-24B9147.91
liver, neonate N20.CNhs11220.823-25A3133.36
liver, neonate N25.CNhs11198.1368-26H1160.20
liver, neonate N30.CNhs11106.1382-42D190.22
lung, adult.CNhs10474.28-22B159.31
lung, embryo E12.CNhs10522.354-16G2116.92
lung, embryo E14.CNhs10604.404-26F865.35
lung, embryo E15.CNhs11020.432-17C589.29
lung, embryo E16.CNhs10998.458-17B680.26
lung, embryo E17.CNhs10605.480-44A659.30
lung, embryo E18.CNhs10583.1287-20I666.65
lung, neonate N00.CNhs11224.640-42C653.08
lung, neonate N06.CNhs11212.683-20E556.28
lung, neonate N07.CNhs11111.715-19A351.16
lung, neonate N10.CNhs11219.750-23E638.43
lung, neonate N20.CNhs11109.822-18A456.37
lung, neonate N25.CNhs11119.1359-25C764.76
lung, neonate N30.CNhs11133.1394-42H262.20
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A173.89
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A175.60
mammary gland, adult lactating day02.CNhs10480.595-22B6151.96
mammary gland, adult pregnant day19.CNhs10476.588-5H271.19
medulla oblongata, adult.CNhs10477.17-12C2198.92
medulla oblongata, neonate N30.CNhs11200.1396-42A3217.31
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C778.36
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C2238.84
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E1103.80
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E2114.79
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E382.08
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D787.94
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D882.44
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D967.94
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D494.73
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D599.95
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D683.80
olfactory brain, adult.CNhs10489.18-22I9134.31
ovary, adult.CNhs10507.91-2I785.59
ovary, embryo E18.CNhs11040.505-44H764.64
ovary, neonate N00.CNhs11217.1299-22I448.05
oviduct, adult pregnant day01.CNhs10500.988-6G660.71
pancreas, adult.CNhs10486.34-16E467.70
pancreas, embryo E14.CNhs11012.405-44F4118.23
pancreas, embryo E15.CNhs11042.1556-45F2113.07
pancreas, embryo E16.CNhs11003.460-26E5111.84
pancreas, embryo E17.CNhs10599.1558-45G371.76
pancreas, embryo E18.CNhs10580.1535-43I782.70
pancreas, neonate N00.CNhs11105.645-26G958.66
pancreas, neonate N01.CNhs11138.1531-43D752.35
pancreas, neonate N02.CNhs11139.1539-43D872.37
pancreas, neonate N16.CNhs11136.787-43B671.11
pancreas, neonate N25.CNhs11094.1555-45E287.50
pancreas, neonate N30.CNhs11182.1548-44H566.01
pituitary gland, adult.CNhs10493.21-1G878.64
pituitary gland, embryo E12.CNhs11018.346-16E6130.54
pituitary gland, embryo E13.CNhs11009.370-44C7129.75
pituitary gland, embryo E14.CNhs11037.398-44A5115.53
pituitary gland, embryo E15.CNhs10592.427-16B9113.85
pituitary gland, embryo E16.CNhs11036.449-43F6108.80
pituitary gland, embryo E17.CNhs11039.1265-44F5114.53
pituitary gland, neonate N00.CNhs11190.1308-22E964.55
placenta, adult pregnant day10.CNhs10472.539-13I778.85
placenta, adult pregnant day17.CNhs10464.577-18G372.87
prostate, adult.CNhs10470.859-1F8156.80
skin, adult.CNhs10492.30-1C353.42
skin, neonate N00.CNhs11124.650-25G447.63
skin, neonate N03.CNhs11215.662-22H352.05
skin, neonate N06.CNhs11097.693-20I540.35
skin, neonate N10.CNhs11108.762-6C435.95
small intestine, neonate N16.CNhs11114.790-21I192.98
spinal cord, adult.CNhs10505.24-13C9182.27
spleen, adult.CNhs10465.25-2G264.93
spleen, embryo E16.CNhs11035.461-43C166.66
spleen, embryo E18.CNhs11011.1271-21F273.71
spleen, neonate N10.CNhs11116.752-24D178.17
spleen, neonate N20.CNhs11112.824-19H157.55
spleen, neonate N25.CNhs11099.1354-25G364.06
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C641.13
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C943.66
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D340.08
stomach, adult.CNhs10503.33-1H6181.39
stomach, embryo E12.CNhs10588.356-43E386.52
stomach, embryo E15.CNhs10603.1252-16G871.98
stomach, embryo E16.CNhs11022.459-17D497.85
stomach, embryo E17.CNhs11006.1035-18D5103.71
stomach, embryo E18.CNhs10999.1286-20C6117.26
stomach, neonate N03.CNhs11193.1340-24B899.93
stomach, neonate N07.CNhs11210.718-18A975.71
stomach, neonate N25.CNhs11104.1355-25E4125.38
stomach, neonate N30.CNhs11134.1386-42I1116.39
submandibular gland, adult.CNhs10469.59-29C1109.36
testis, adult.CNhs10504.57-7G5819.61
testis, embryo E13.CNhs11031.389-23F578.20
testis, embryo E15.CNhs11034.443-27C5126.24
testis, embryo E16.CNhs11033.470-26G589.45
testis, embryo E17.CNhs11029.486-18I5100.62
testis, embryo E18.CNhs11027.503-18G5102.89
testis, neonate N00.CNhs11189.1300-22B767.72
testis, neonate N07.CNhs11222.726-26I482.68
testis, neonate N10.CNhs11204.763-44D998.46
testis, neonate N20.CNhs11110.839-18H3271.54
testis, neonate N30.CNhs11130.1391-42E2403.24
thymus, adult.CNhs10471.38-12B563.52
thymus, embryo E14.CNhs11041.402-44I4107.85
thymus, embryo E15.CNhs11005.430-45I2111.13
thymus, embryo E16.CNhs11002.456-26C5100.30
thymus, embryo E17.CNhs10581.478-18C187.01
thymus, embryo E18.CNhs10595.1273-19G468.15
thymus, neonate N02.CNhs11181.1541-43F862.38
thymus, neonate N03.CNhs11137.2104-43C769.12
thymus, neonate N06.CNhs11197.681-26C472.59
thymus, neonate N07.CNhs11211.713-19D360.51
thymus, neonate N10.CNhs11194.748-24E466.04
thymus, neonate N20.CNhs11186.820-7A260.23
thymus, neonate N25.CNhs11125.1362-25G763.50
thymus, neonate N30.CNhs11132.1393-42G263.93
tongue, adult.CNhs10499.32-1B4131.28
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H388.35
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F776.35
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G592.00
urinary bladder, adult.CNhs10481.879-12E479.01
uterus, adult pregnant day19.CNhs10497.590-15F5100.22
uterus, adult.CNhs10509.92-27E573.26
vagina, adult.CNhs10502.89-27D555.95
vesicular gland, adult.CNhs10491.51-27F891.79
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A1217.99
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A2237.07
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A3229.73
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D7216.71
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A4240.46
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A5239.46
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A6235.58
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A7215.25
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A8236.99
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A9197.27
whole body, embryo E11.CNhs11014.324-5I8141.46
whole body, embryo E12.CNhs10587.857-27C9117.31
whole body, embryo E13.CNhs10512.372-23H2106.71
whole body, embryo E14.5.CNhs10578.420-27D282.90
whole body, embryo E14.CNhs10519.395-14B1116.13
whole body, embryo E16.CNhs10514.453-14F2120.97
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G5104.90
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G591.89
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G5111.68
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G5107.14
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G5103.42
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G595.44
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G596.17
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G584.32
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G581.56
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G577.16
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G586.33
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G592.21
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G5109.61
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G5100.24
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G5124.12
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G5102.58
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G597.28
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G5111.04
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G596.46
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G5102.55
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G596.95
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G5133.11
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G597.91
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G5116.72
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G597.16
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G585.99
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G5103.54
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G591.57
whole body, embryo E17.5.CNhs10513.490-9F987.19
whole body, embryo E17.CNhs10517.475-3I569.45
whole body, embryo E18.CNhs10516.493-3B385.39
whole body, neonate N00.CNhs10525.657-19C266.61
whole body, neonate N01.CNhs10576.659-23C671.73
whole body, neonate N06.CNhs10515.692-21D189.12
whole body, neonate N10.CNhs10518.761-6B4137.27





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)5.66e-0923
neuroblast (sensu Vertebrata)5.66e-0923
ectodermal cell9.74e-0744
neurectodermal cell9.74e-0744

Uber anatomy
Ontology termp-valuen
structure with developmental contribution from neural crest3.14e-1992
regional part of nervous system1.83e-1754
neural tube9.30e-1752
neural rod9.30e-1752
future spinal cord9.30e-1752
neural keel9.30e-1752
central nervous system1.50e-1573
nervous system1.92e-1575
gray matter7.26e-1534
brain1.12e-1447
future brain1.12e-1447
regional part of brain1.79e-1446
neurectoderm2.20e-1464
neural plate2.20e-1464
presumptive neural plate2.20e-1464
brain grey matter3.35e-1329
regional part of telencephalon3.35e-1329
telencephalon3.35e-1329
anterior neural tube1.62e-1240
regional part of forebrain4.27e-1239
forebrain4.27e-1239
future forebrain4.27e-1239
tube1.71e-11114
anatomical conduit3.82e-11122
pre-chordal neural plate6.15e-1149
ectoderm-derived structure7.67e-1195
ectoderm7.67e-1195
presumptive ectoderm7.67e-1195
ecto-epithelium2.20e-1073
cerebral cortex1.16e-0921
cerebral hemisphere1.16e-0921
pallium1.16e-0921
regional part of cerebral cortex1.27e-0817
occipital lobe1.76e-0710
visual cortex1.76e-0710
neocortex1.76e-0710
compound organ2.26e-0743
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