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FFCP PHASE1:Mm9::chr6:144996050..144996074,-: Difference between revisions

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{{FFCP
{{FFCP
|id=chr6:144996050..144996074,-
|DHSsupport=NA
|short_description=p9@Bcat1
|DPIdataset=NA
|description=CAGE_peak_9_at_Bcat1_5end
|association_with_transcript=106bp_to_ENSMUST00000149769_5end
|EntrezGene=12035
|EntrezGene=12035
|HGNC=
|HGNC=
|TSSclassifier=NA
|UniProt=B2KFA9
|UniProt=B2KFA9
|association_with_transcript=106bp_to_ENSMUST00000149769_5end
|cluster_id=chr6:144996050..144996074,-
|description=CAGE_peak_9_at_Bcat1_5end
|id=chr6:144996050..144996074,-
|ontology_enrichment_celltype=CL:0002319!1.53e-13!43;CL:0000221!2.62e-13!44;CL:0000133!2.62e-13!44;CL:0000055!2.59e-11!50;CL:0000117!3.70e-10!23;CL:0000337!3.70e-10!23;CL:0000540!7.25e-10!33;CL:0000047!7.25e-10!33;CL:0000031!7.25e-10!33;CL:0000404!7.25e-10!33;CL:0000393!2.16e-08!39;CL:0000211!2.16e-08!39
|ontology_enrichment_celltype_v019_2=CL:0000117,1.45e-11,23;CL:0000337,1.45e-11,23;CL:0002319,3.10e-11,43;CL:0000221,8.29e-11,44;CL:0000133,8.29e-11,44;CL:0000540,2.34e-07,33;CL:0000047,2.34e-07,33;CL:0000031,2.34e-07,33;CL:0000404,2.34e-07,33;CL:0000393,3.12e-07,39;CL:0000211,3.12e-07,39
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0004121!2.60e-32!102;UBERON:0000924!2.60e-32!102;UBERON:0006601!2.60e-32!102;UBERON:0002346!1.11e-30!71;UBERON:0003075!1.11e-30!71;UBERON:0007284!1.11e-30!71;UBERON:0000073!6.48e-30!75;UBERON:0001016!6.48e-30!75;UBERON:0001017!2.08e-28!73;UBERON:0005743!2.08e-28!73;UBERON:0000033!1.17e-27!63;UBERON:0000955!1.26e-23!50;UBERON:0006238!1.26e-23!50;UBERON:0003056!1.31e-23!49;UBERON:0001049!2.35e-23!52;UBERON:0005068!2.35e-23!52;UBERON:0006241!2.35e-23!52;UBERON:0007135!2.35e-23!52;UBERON:0002616!8.31e-23!49;UBERON:0003080!1.75e-17!40;UBERON:0002780!7.84e-17!39;UBERON:0001890!7.84e-17!39;UBERON:0006240!7.84e-17!39;UBERON:0002020!5.61e-16!34;UBERON:0002791!1.24e-14!29;UBERON:0003528!1.24e-14!29;UBERON:0001893!1.24e-14!29;UBERON:0000153!7.21e-14!94;UBERON:0007811!1.15e-13!86;UBERON:0000956!2.37e-11!21;UBERON:0001869!2.37e-11!21;UBERON:0000203!2.37e-11!21;UBERON:0002619!2.07e-09!17;UBERON:0000970!4.26e-07!9;UBERON:0000019!4.26e-07!9;UBERON:0000047!4.26e-07!9;UBERON:0004088!4.26e-07!9;UBERON:0002104!4.26e-07!9;UBERON:0001456!4.26e-07!9;UBERON:0003072!4.26e-07!9;UBERON:0003071!4.26e-07!9;UBERON:0004128!4.26e-07!9
|ontology_enrichment_uberon_v019_2=UBERON:0004121,5.93e-36,95;UBERON:0000924,5.93e-36,95;UBERON:0006601,5.93e-36,95;UBERON:0002346,2.90e-35,64;UBERON:0003075,2.90e-35,64;UBERON:0007284,2.90e-35,64;UBERON:0001016,9.05e-33,75;UBERON:0003056,1.75e-32,49;UBERON:0001017,1.45e-30,73;UBERON:0000073,2.79e-29,54;UBERON:0010371,6.08e-29,73;UBERON:0001049,1.16e-27,52;UBERON:0005068,1.16e-27,52;UBERON:0006241,1.16e-27,52;UBERON:0007135,1.16e-27,52;UBERON:0000955,4.98e-27,47;UBERON:0006238,4.98e-27,47;UBERON:0002616,8.76e-26,46;UBERON:0010314,3.99e-23,92;UBERON:0003080,1.22e-22,40;UBERON:0002780,1.31e-21,39;UBERON:0001890,1.31e-21,39;UBERON:0006240,1.31e-21,39;UBERON:0002020,7.14e-21,34;UBERON:0003528,1.20e-20,29;UBERON:0002791,1.20e-20,29;UBERON:0001893,1.20e-20,29;UBERON:0000956,1.48e-16,21;UBERON:0001869,1.48e-16,21;UBERON:0000203,1.48e-16,21;UBERON:0002619,2.63e-13,17;UBERON:0000970,6.81e-11,9;UBERON:0000019,6.81e-11,9;UBERON:0000047,6.81e-11,9;UBERON:0010312,6.81e-11,9;UBERON:0004088,6.81e-11,9;UBERON:0002104,6.81e-11,9;UBERON:0001456,6.81e-11,9;UBERON:0003072,6.81e-11,9;UBERON:0004128,6.81e-11,9;UBERON:0003071,6.81e-11,9;UBERON:0002021,4.21e-09,10;UBERON:0000411,4.21e-09,10;UBERON:0001950,4.21e-09,10;UBERON:0000025,1.40e-08,114;UBERON:0001444,1.87e-08,11;UBERON:0004111,7.25e-08,122;UBERON:0000020,1.51e-07,12;UBERON:0001032,1.51e-07,12;UBERON:0004456,1.51e-07,12;UBERON:0000033,8.75e-07,13;UBERON:0005085,8.75e-07,13
|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510259740906419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782391344348039,0.872100625521786,5.71184075109627,3.69416808241138,4.19959264876088,4.31257693094915,0,0,0,3.34437266846731,3.43840127926508,0,1.82084814773638,3.1739458756322,1.26766280701236,0,0,0,0,0,0,1.53687322128622,3.11068836925433,2.16009501330705,1.68259969081106,0.571301968807607,1.98781686856452,1.5923803897944,2.49198224647415,0.919218786610021,3.30347642998166,2.42605942361857,4.14737639791857,0.923204014111357,1.64677758484337,2.6045668527838,1.67509799400829,1.12552522006336,3.20876320331301,0.589257170947335,2.56269025438385,1.1183966749518,3.71058347332602,7.78387069099891,0,0,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0,0,0,0.45673551887624,0,0.29688427812965,0.346970653532272,0.608930956624282,0.461230994512117,0.452167921657868,0.470354828542819,0.502666365318702,0,0.144599356919912,0,1.45590164952668,0.220841518460394,0,0,7.61230072230023,8.16842156572475,0,0,0,0,4.19413790333504,4.11750542536764,1.13088916901578,3.82413504423008,4.34716277461562,4.77912502486988,6.97637431191358,0.203678727700633,0.124406970610093,0,5.05060454127538,3.6433724029557,2.06911893990126,2.52086981727489,4.52114453507145,5.78310242786287,10.6334387836425,10.4945931506896,9.31332134660456,0.431135985865684,0.378212160335639,0.351902248327898,0.657587197282725,0.556094498451196,0.348252166522167,0.205782136407943,0.199034266818493,0,0,0,0.621377317606506,0.469052119962192,0.180062061461015,0,0,0.154267112887378,0,0,1.05088808130453,0.16455984991348,0,0.324275238183423,0.292399974850665,0.658650345873152,0.805238512562231,3.99550902271842,3.49875682089567,0,0,0,0.464473343720877,0.128867461322093,0,0,0,0,0,0,0,0,0.898819408654221,0,0,0,0.114248512609729,0,0.203651327845314,0,0.561086559122548,0.0632365371242573,0,0.627994911365499,0.987177311374404,0,0.166845105716094,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0,0.179397413521912,0,0,0.757965647081939,0,0,0.234690248288502,0,0.238043640886014,0,0,0,0,0,0.172684981865896,0,0,0,0,0,11.559642479121,16.4096361229084,0,1.51482556322624,0.94652465824877,0.780877488593277,0.646270193198397,1.19484398976276,0.222798674082394,0.283076530788832,0.404810701674894,0,0.395287777946524,11.5675673911851,9.9358059645788,1.06839362200353,0.325773918707152,4.45419332025846,0,0,0,0,0,0,0,0,0,0,0,0,1.02131881726136,1.44048875225048,1.81102157295856,1.07168517515796,0.177340233642274,0.178368817602071,0.493647061806363,0.608929898229199,0.23467170806371,0,0,0.32977250588296,0.161464426695906,0.241251699712623,0.119372344003136,0.164140899745061,0,14.4631735568198,0,0,0,0,0,0.228778173206523,0,0,0,0.954670618015114,0.632671987162271,0.406638934253697,0.216010681643603,1.88179466413022,0.87345025498471,0.269728692769641,0,0,0,0,0,0,0,0,0,0.337912250981556,0,0.13020438484395,0,0,0,0,0.202725215290164,0.205421914329655,0,0,0,0,0,0.100966449948148,0,0,0,0,0,0,0,0,0,0.19318959403219,7.50729901804728,13.3700685715104,3.21552568618599,0,2.25900737046827,4.14292712856459,4.01026859407578,2.57779773515531,2.74033007908257,1.5107877947794,1.35004500046361,2.70192721934532,1.81256963593682,2.07104124700728,2.28332164685189,1.99512436700516,1.19513524027894,0.972426868273176,0.419226325255965,0.735374033800057,0.666740183404846,0.206035057238894,0.64183841918363,0.505394423527595,0.25347929989024,0.188626341386076,0.655490552289177,0.89635213366817,0.861532034334199,1.42888107384922,0.579421629724277,1.35036454324594,0.824171801606613,0.294397840268795,0.685738504770831,0.70990322463735,0.476872379894642,0.436039249896986,0.846984423737976,0.761531471025089,0.182927972872773,1.57841826862706,0.814824683075171,0.561142271657738,0.711810108745045,0.591026894253381,0.818462086339379,1.08455788830176,0.192906610981141,0.749431733813838,0.467863216890817,0.429742108096597,1.3390183244819,0,0.463735671240843
|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510259740906419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782391344348039,0.872100625521786,5.71184075109627,3.69416808241138,4.19959264876088,4.31257693094915,0,0,0,3.34437266846731,3.43840127926508,0,1.82084814773638,3.1739458756322,1.26766280701236,0,0,0,0,0,0,1.53687322128622,3.11068836925433,2.16009501330705,1.68259969081106,0.571301968807607,1.98781686856452,1.5923803897944,2.49198224647415,0.919218786610021,3.30347642998166,2.42605942361857,4.14737639791857,0.923204014111357,1.64677758484337,2.6045668527838,1.67509799400829,1.12552522006336,3.20876320331301,0.589257170947335,2.56269025438385,1.1183966749518,3.71058347332602,7.78387069099891,0,0,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0,0,0,0.45673551887624,0,0.29688427812965,0.346970653532272,0.608930956624282,0.461230994512117,0.452167921657868,0.470354828542819,0.502666365318702,0,0.144599356919912,0,1.45590164952668,0.220841518460394,0,0,7.61230072230023,8.16842156572475,0,0,0,0,4.19413790333504,4.11750542536764,1.13088916901578,3.82413504423008,4.34716277461562,4.77912502486988,6.97637431191358,0.203678727700633,0.124406970610093,0,5.05060454127538,3.6433724029557,2.06911893990126,2.52086981727489,4.52114453507145,5.78310242786287,10.6334387836425,10.4945931506896,9.31332134660456,0.431135985865684,0.378212160335639,0.351902248327898,0.657587197282725,0.556094498451196,0.348252166522167,0.205782136407943,0.199034266818493,0,0,0,0.621377317606506,0.469052119962192,0.180062061461015,0,0,0.154267112887378,0,0,1.05088808130453,0.16455984991348,0,0.324275238183423,0.292399974850665,0.658650345873152,0.805238512562231,3.99550902271842,3.49875682089567,0,0,0,0.464473343720877,0.128867461322093,0,0,0,0,0,0,0,0,0.898819408654221,0,0,0,0.114248512609729,0,0.203651327845314,0,0.561086559122548,0.0632365371242573,0,0.627994911365499,0.987177311374404,0,0.166845105716094,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0,0.179397413521912,0,0,0.757965647081939,0,0,0.234690248288502,0,0.238043640886014,0,0,0,0,0,0.172684981865896,0,0,0,0,0,11.559642479121,16.4096361229084,0,1.51482556322624,0.94652465824877,0.780877488593277,0.646270193198397,1.19484398976276,0.222798674082394,0.283076530788832,0.404810701674894,0,0.395287777946524,11.5675673911851,9.9358059645788,1.06839362200353,0.325773918707152,4.45419332025846,0,0,0,0,0,0,0,0,0,0,0,0,1.02131881726136,1.44048875225048,1.81102157295856,1.07168517515796,0.177340233642274,0.178368817602071,0.493647061806363,0.608929898229199,0.23467170806371,0,0,0.32977250588296,0.161464426695906,0.241251699712623,0.119372344003136,0.164140899745061,0,14.4631735568198,0,0,0,0,0,0.228778173206523,0,0,0,0.954670618015114,0.632671987162271,0.406638934253697,0.216010681643603,1.88179466413022,0.87345025498471,0.269728692769641,0,0,0,0,0,0,0,0,0,0.337912250981556,0,0.13020438484395,0,0,0,0,0.202725215290164,0.205421914329655,0,0,0,0,0,0.100966449948148,0,0,0,0,0,0,0,0,0,0.19318959403219,7.50729901804728,13.3700685715104,3.21552568618599,0,2.25900737046827,4.14292712856459,4.01026859407578,2.57779773515531,2.74033007908257,1.5107877947794,1.35004500046361,2.70192721934532,1.81256963593682,2.07104124700728,2.28332164685189,1.99512436700516,1.19513524027894,0.972426868273176,0.419226325255965,0.735374033800057,0.666740183404846,0.206035057238894,0.64183841918363,0.505394423527595,0.25347929989024,0.188626341386076,0.655490552289177,0.89635213366817,0.861532034334199,1.42888107384922,0.579421629724277,1.35036454324594,0.824171801606613,0.294397840268795,0.685738504770831,0.70990322463735,0.476872379894642,0.436039249896986,0.846984423737976,0.761531471025089,0.182927972872773,1.57841826862706,0.814824683075171,0.561142271657738,0.711810108745045,0.591026894253381,0.818462086339379,1.08455788830176,0.192906610981141,0.749431733813838,0.467863216890817,0.429742108096597,1.3390183244819,0,0.463735671240843
|short_description=p9@Bcat1
}}
}}

Latest revision as of 21:51, 26 September 2015

Short description:p9@Bcat1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_9_at_Bcat1_5end
Coexpression cluster:NA
Association with transcript: 106bp_to_ENSMUST00000149769_5end
EntrezGene:Bcat1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p9@Bcat1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.32
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.51
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.78
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.87
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B85.71
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C33.69
Mouse Astrocytes, donor2.CNhs12078.11552-120C44.20
Mouse Astrocytes, donor3.CNhs12107.11633-122C44.31
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C13.34
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E13.44
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C31.82
Mouse Granule cells, donor2.CNhs12357.11731-123E33.17
Mouse Granule cells, donor3.CNhs12108.11636-122C71.27
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E81.54
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D53.11
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F52.16
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D91.68
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.57
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D51.99
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D21.59
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F22.49
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.92
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D33.30
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F32.43
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D74.15
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.92
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F41.65
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D82.60
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E41.68
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E51.13
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I63.21
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.59
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F62.56
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E11.12
Mouse Schwann, donor1.CNhs12507.11728-123D93.71
Mouse Schwann, donor2.CNhs12573.11746-123F97.78
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.14
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.46
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.30
adrenal gland, embryo E14.CNhs11038.406-44C50.35
adrenal gland, embryo E16.CNhs11004.1254-43D60.61
adrenal gland, embryo E17.CNhs11043.1263-45I10.46
adrenal gland, embryo E18.CNhs11026.1262-18F50.45
adrenal gland, neonate N00.CNhs11191.1311-23C10.47
adrenal gland, neonate N25.CNhs11223.1377-27I30.50
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.14
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F51.46
bone (os femoris), neonate N16.CNhs11225.1525-43A60.22
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B27.61
cerebellum, neonate N30.CNhs11135.1395-42I28.17
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A44.19
corpus striatum, adult.CNhs10487.19-21D84.12
corpus striatum, neonate N00.CNhs11226.630-43F11.13
cortex, adult.CNhs10473.12-14D53.82
cortex, neonate N30.CNhs11107.1392-42F24.35
diencephalon, adult.CNhs10482.20-12F24.78
diencephalon, neonate N30.CNhs11201.1388-42B26.98
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.20
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.12
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G45.05
eyeball, embryo E12.CNhs11016.345-16C63.64
eyeball, embryo E14.CNhs10521.399-16E22.07
eyeball, embryo E15.CNhs10593.426-16C92.52
eyeball, embryo E17.CNhs11023.1261-18D44.52
eyeball, neonate N00.CNhs11207.633-15C65.78
eyeball, neonate N01.CNhs11140.1532-43E710.63
eyeball, neonate N02.CNhs11205.1551-44G810.49
eyeball, neonate N16.CNhs11188.777-19A29.31
forelimb, embryo E11.CNhs10596.335-25E20.43
forelimb, embryo E12.CNhs10600.359-14H20.38
forelimb, embryo E13.CNhs10589.384-1E20.35
forelimb, embryo E14.CNhs10577.413-26A80.66
forelimb, embryo E15.CNhs11007.437-20E70.56
forelimb, embryo E17.CNhs10598.1517-43C40.35
forelimb, embryo E18.CNhs11008.1520-43B50.21
gonad, embryo E13.CNhs11044.1564-45I60.20
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.62
heart, embryo E12.CNhs11015.353-12F50.47
heart, embryo E13.CNhs11013.376-3I90.18
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.15
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E31.05
heart, neonate N03.CNhs11221.1349-25I20.16
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.32
heart, neonate N20.CNhs11127.821-26I60.29
heart, neonate N25.CNhs11196.1351-25D30.66
heart, neonate N30.CNhs11202.1390-42D20.81
hippocampus, adult.CNhs10478.13-16E84.00
hippocampus, neonate N00.CNhs11228.627-43G13.50
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.46
intestine, embryo E15.CNhs10602.976-16D80.13
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.90
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.11
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.20
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.56
kidney, neonate N10.CNhs11206.758-6D50.06
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.63
kidney, neonate N30.CNhs11203.1385-42H10.99
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.17
liver, embryo E13.CNhs10524.378-3H60.20
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.18
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.76
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.23
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.24
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.17
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C211.56
medulla oblongata, neonate N30.CNhs11200.1396-42A316.41
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C21.51
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.95
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.78
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.65
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D71.19
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.22
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.28
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.40
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.40
olfactory brain, adult.CNhs10489.18-22I911.57
ovary, adult.CNhs10507.91-2I79.94
ovary, embryo E18.CNhs11040.505-44H71.07
ovary, neonate N00.CNhs11217.1299-22I40.33
oviduct, adult pregnant day01.CNhs10500.988-6G64.45
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G81.02
pituitary gland, embryo E12.CNhs11018.346-16E61.44
pituitary gland, embryo E13.CNhs11009.370-44C71.81
pituitary gland, embryo E14.CNhs11037.398-44A51.07
pituitary gland, embryo E15.CNhs10592.427-16B90.18
pituitary gland, embryo E16.CNhs11036.449-43F60.18
pituitary gland, embryo E17.CNhs11039.1265-44F50.49
pituitary gland, neonate N00.CNhs11190.1308-22E90.61
placenta, adult pregnant day10.CNhs10472.539-13I70.23
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.33
skin, neonate N00.CNhs11124.650-25G40.16
skin, neonate N03.CNhs11215.662-22H30.24
skin, neonate N06.CNhs11097.693-20I50.12
skin, neonate N10.CNhs11108.762-6C40.16
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C914.46
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.23
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E30.63
stomach, embryo E15.CNhs10603.1252-16G80.41
stomach, embryo E16.CNhs11022.459-17D40.22
stomach, embryo E17.CNhs11006.1035-18D51.88
stomach, embryo E18.CNhs10999.1286-20C60.87
stomach, neonate N03.CNhs11193.1340-24B80.27
stomach, neonate N07.CNhs11210.718-18A90.00
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.34
testis, neonate N00.CNhs11189.1300-22B70.00
testis, neonate N07.CNhs11222.726-26I40.13
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.20
thymus, embryo E15.CNhs11005.430-45I20.21
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.10
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.19
uterus, adult pregnant day19.CNhs10497.590-15F57.51
uterus, adult.CNhs10509.92-27E513.37
vagina, adult.CNhs10502.89-27D53.22
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A12.26
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A24.14
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A34.01
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D72.58
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A42.74
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A51.51
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A61.35
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A72.70
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A81.81
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A92.07
whole body, embryo E11.CNhs11014.324-5I82.28
whole body, embryo E12.CNhs10587.857-27C92.00
whole body, embryo E13.CNhs10512.372-23H21.20
whole body, embryo E14.5.CNhs10578.420-27D20.97
whole body, embryo E14.CNhs10519.395-14B10.42
whole body, embryo E16.CNhs10514.453-14F20.74
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.67
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.21
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.64
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.66
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.90
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.86
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G51.43
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.35
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.29
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.71
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.85
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.18
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.58
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.81
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.71
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.59
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.08
whole body, embryo E17.5.CNhs10513.490-9F90.19
whole body, embryo E17.CNhs10517.475-3I50.75
whole body, embryo E18.CNhs10516.493-3B30.47
whole body, neonate N00.CNhs10525.657-19C20.43
whole body, neonate N01.CNhs10576.659-23C61.34
whole body, neonate N06.CNhs10515.692-21D10.00
whole body, neonate N10.CNhs10518.761-6B40.46





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)1.45e-1123
neuroblast (sensu Vertebrata)1.45e-1123
neural cell3.10e-1143
ectodermal cell8.29e-1144
neurectodermal cell8.29e-1144
neuron2.34e-0733
neuronal stem cell2.34e-0733
neuroblast2.34e-0733
electrically signaling cell2.34e-0733
electrically responsive cell3.12e-0739
electrically active cell3.12e-0739

Uber anatomy
Ontology termp-valuen
ectoderm-derived structure5.93e-3695
ectoderm5.93e-3695
presumptive ectoderm5.93e-3695
neurectoderm2.90e-3564
neural plate2.90e-3564
presumptive neural plate2.90e-3564
nervous system9.05e-3375
pre-chordal neural plate1.75e-3249
central nervous system1.45e-3073
regional part of nervous system2.79e-2954
ecto-epithelium6.08e-2973
neural tube1.16e-2752
neural rod1.16e-2752
future spinal cord1.16e-2752
neural keel1.16e-2752
brain4.98e-2747
future brain4.98e-2747
regional part of brain8.76e-2646
structure with developmental contribution from neural crest3.99e-2392
anterior neural tube1.22e-2240
regional part of forebrain1.31e-2139
forebrain1.31e-2139
future forebrain1.31e-2139
gray matter7.14e-2134
brain grey matter1.20e-2029
regional part of telencephalon1.20e-2029
telencephalon1.20e-2029
cerebral cortex1.48e-1621
cerebral hemisphere1.48e-1621
pallium1.48e-1621
regional part of cerebral cortex2.63e-1317
eye6.81e-119
camera-type eye6.81e-119
simple eye6.81e-119
immature eye6.81e-119
ocular region6.81e-119
visual system6.81e-119
face6.81e-119
optic cup6.81e-119
optic vesicle6.81e-119
eye primordium6.81e-119
occipital lobe4.21e-0910
visual cortex4.21e-0910
neocortex4.21e-0910
tube1.40e-08114
subdivision of head1.87e-0811
anatomical conduit7.25e-08122
sense organ1.51e-0712
sensory system1.51e-0712
entire sense organ system1.51e-0712
head8.75e-0713
ectodermal placode8.75e-0713
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