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FFCP PHASE1:Mm9::chr15:68758825..68758839,+: Difference between revisions

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(Created page with "{{FFCP |id=chr15:68758825..68758839,+ |short_description=p2@Khdrbs3 |description=CAGE_peak_2_at_Khdrbs3_5end |association_with_transcript=-10bp_to_ENSMUST00000022954,NM_01...")
 
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{{FFCP
{{FFCP
|id=chr15:68758825..68758839,+
|DHSsupport=NA
|short_description=p2@Khdrbs3
|DPIdataset=NA
|description=CAGE_peak_2_at_Khdrbs3_5end
|association_with_transcript=-10bp_to_ENSMUST00000022954,NM_010158,uc007wbf.1_5end
|EntrezGene=13992
|EntrezGene=13992
|HGNC=
|HGNC=
|MCL_coexpression_id=2993
|TSSclassifier=NA
|UniProt=Q9R226
|UniProt=Q9R226
|association_with_transcript=-10bp_to_ENSMUST00000022954,NM_010158,uc007wbf.1_5end
|cluster_id=chr15:68758825..68758839,+
|description=CAGE_peak_2_at_Khdrbs3_5end
|id=chr15:68758825..68758839,+
|ontology_enrichment_celltype=CL:0002319!7.83e-15!43;CL:0000540!1.65e-14!33;CL:0000047!1.65e-14!33;CL:0000031!1.65e-14!33;CL:0000404!1.65e-14!33;CL:0000221!2.36e-14!44;CL:0000133!2.36e-14!44;CL:0000117!1.55e-13!23;CL:0000337!1.55e-13!23;CL:0000055!1.61e-11!50;CL:0000393!1.72e-10!39;CL:0000211!1.72e-10!39
|ontology_enrichment_celltype_v019_2=CL:0002319,5.86e-15,43;CL:0000540,1.24e-14,33;CL:0000047,1.24e-14,33;CL:0000031,1.24e-14,33;CL:0000404,1.24e-14,33;CL:0000221,1.78e-14,44;CL:0000133,1.78e-14,44;CL:0000117,1.19e-13,23;CL:0000337,1.19e-13,23;CL:0000393,1.05e-10,39;CL:0000211,1.05e-10,39
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
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|ontology_enrichment_uberon_v019_2=UBERON:0010314,1.52e-31,92;UBERON:0001017,2.81e-28,73;UBERON:0001016,3.92e-28,75;UBERON:0002346,8.45e-28,64;UBERON:0003075,8.45e-28,64;UBERON:0007284,8.45e-28,64;UBERON:0004121,3.00e-25,95;UBERON:0000924,3.00e-25,95;UBERON:0006601,3.00e-25,95;UBERON:0003056,4.99e-24,49;UBERON:0000073,1.06e-23,54;UBERON:0001049,9.73e-23,52;UBERON:0005068,9.73e-23,52;UBERON:0006241,9.73e-23,52;UBERON:0007135,9.73e-23,52;UBERON:0010371,1.60e-22,73;UBERON:0002020,5.25e-21,34;UBERON:0003080,2.43e-20,40;UBERON:0002780,5.33e-20,39;UBERON:0001890,5.33e-20,39;UBERON:0006240,5.33e-20,39;UBERON:0000955,1.83e-19,47;UBERON:0006238,1.83e-19,47;UBERON:0002616,2.21e-19,46;UBERON:0003528,3.52e-18,29;UBERON:0002791,3.52e-18,29;UBERON:0001893,3.52e-18,29;UBERON:0000025,1.61e-15,114;UBERON:0004111,8.28e-15,122;UBERON:0000956,4.17e-14,21;UBERON:0001869,4.17e-14,21;UBERON:0000203,4.17e-14,21;UBERON:0002619,1.64e-11,17;UBERON:0000922,1.63e-08,320;UBERON:0002021,3.71e-08,10;UBERON:0000411,3.71e-08,10;UBERON:0001950,3.71e-08,10
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|phase1_expression=6.08565618998217,0.348975407639361,1.36499771816861,1.51232105653415,1.00179145989269,2.51818907867835,2.10251376535973,0,0.422366166455,1.17032263160997,0,0,0,0.524522414513984,0.333109761815663,0.202475267389826,0,0,0,0,8.92954546586233,0,0,0.95995453676044,0.68822784320151,1.14846392823004,0.86152399231815,1.29282739611533,1.71021077510736,3.52842181663903,1.77384408524244,0,0,0,2.02196133825892,3.98963148860382,3.06254034393554,0,0,0,0,0,0.485510353031154,0.125896817975577,0,0.183546752161682,2.34717403304412,11.3373081317832,9.22681967484782,6.02732687130279,3.3596741190087,5.75010257459886,0,0.725362142011344,0,2.82985379639542,2.57880095944881,4.12537673821954,23.2663929988537,17.9856932952491,21.5502677192101,2.03306719241479,0,0.449949858640699,0.988866362566974,1.4209602298922,4.49400165777607,8.4528027170742,37.328260431052,27.2711995430015,28.604194743788,18.5673139862472,16.1234034894678,24.4981598429908,24.728131522705,25.7381260250806,6.60695285996332,18.5146640223522,16.5895055916743,22.420668914133,25.2505896342651,19.2737947106001,14.2383329490704,12.380777420697,23.6837284054056,17.0884579574727,17.5117167382897,24.4183274031144,3.25622631332691,5.44115232768856,10.4351215932604,6.0229671388697,5.439770669662,2.69851595818909,3.24888208723835,4.03224198387602,4.91555470461132,2.04516387093669,2.59786004602869,2.12003744706204,2.25349471642689,0,0,0,0.216491041011214,1.01343946190039,0,3.31133251185274,0,5.19547486726887,5.72501578328248,3.04465478312141,4.15107895060905,2.41156224884196,2.82212897125692,6.91166252313215,0.494389935468748,5.35017620603673,1.76922110389975,0.970601099684455,1.98757366614354,2.90925151881133,0,1.46390398505774,1.8850203613211,1.02182822083437,1.55759661857696,1.19980546198682,1.27070227073065,8.53806644607489,7.77751024791665,17.2146462394624,31.6360262749943,38.8687495142102,13.714010940931,14.1149898868949,4.48093200941392,1.8661045591514,8.33985102831127,13.2578369208479,7.54698569183682,12.1848115349741,9.54329287968351,9.34369870581433,13.6072998302656,11.1458936647819,18.4592397382666,5.17406741478031,4.74249584452253,2.83659120251729,3.51902248327898,3.72632745126877,0.834141747676794,2.089512999133,1.4404749548556,4.97585667046233,0.702213187313235,1.28673953557358,0,10.3562886267751,5.39409937956521,6.84235833551856,9.46978942340841,7.28027657465394,8.17615698303105,8.13868806626427,13.1453966685813,10.0418194435766,14.3167069424728,6.895033491322,7.37726166867287,10.2339991197733,7.46470391989572,5.90508242545636,30.4920425417985,30.1510514271303,0,0.528901133327089,5.75878276445132,4.64473343720877,4.12375876230699,2.62188582010345,2.00140239460383,2.66315876557583,1.89811624617805,1.64698954724011,1.25667604400135,1.79060824837036,1.75467678407208,0.898819408654221,1.08069024937347,0.597423819763102,4.55202962287396,3.77020091612105,4.50830942692322,2.64746726198909,3.87904974335251,5.61086559122549,6.82954600941979,3.98547399544926,3.1399745568275,2.96153193412321,4.74324203339438,2.33583148002532,1.76903095601883,2.69834534861824,1.01430060694251,1.4470629585145,1.78238096246994,1.15078454980324,0.972811360650212,1.09824565275233,2.87536413054709,2.60498663367952,3.12037673114561,4.2938409251009,3.76734568396016,5.30687873499704,0.923765950833023,6.44270800019648,2.44447464663039,3.05541154395339,2.34690248288502,1.50755631697634,0.952174563544055,3.31727201358258,2.04925687338048,4.4292937929755,4.30527875375215,1.14704320301017,2.24490476425664,1.44649058581512,0,0,4.91764273019036,8.00216564283724,8.0275294993896,9.96299336033727,0,2.01976741763498,8.83423014365519,8.98009111882268,7.10897212518236,4.30143836314594,4.90157082981267,5.66153061577665,6.8817819284732,4.9683495844923,5.92931666919785,5.46246237917072,5.67760340833074,3.20518086601059,1.14020871547503,3.79431282836832,1.32745138339963,1.69946445308487,2.41858845571801,0.943025398779491,2.36241514304618,2.15204603560749,1.03371317267288,1.81766864738753,0.712994756769443,0.316036757935816,0,0,7.83011093233712,10.8036656418786,11.5129228566652,10.9311887866112,7.09360934569094,5.70780216326626,3.62007845324666,2.43571959291679,1.64270195644597,0.63549621259146,5.07215315526412,0.32977250588296,0.322928853391811,0.844380948994182,0.596861720015682,0.656563598980245,2.04036585640896,9.6421157045465,1.53783792718067,16.9237231729842,6.66700298530962,2.26042148405629,1.50363650493128,1.37266903923914,2.37969801991397,3.21888340344413,1.38199973804424,2.86401185404534,9.01557581706236,4.87966721104437,5.72428306355547,3.97267762427491,3.49380101993884,3.9110660451598,4.71124697634415,3.14107130380836,3.36998930558661,0.621339313086926,10.7101658349996,3.43888055901151,3.47462829959905,4.083474955225,4.64975364519832,2.53434188236167,1.64300134104056,4.4269490846943,2.41176492179135,9.90494895386625,7.4887801627045,0,6.08175645870493,2.56777392912068,0.649604114888975,0.358053391334963,0.39736270956253,0.721172697119813,0.443068581523732,0.302899349844443,0.15241361331,0,0.0974578807397524,0.288635524920988,0.584384510907845,2.94749498699775,3.32978930061097,0.538283139656854,0.671538465456314,5.9888774149979,3.56596703357246,2.56412273974171,0.428736758158132,5.01572104035363,25.9785847603851,28.0798394269378,33.227939779485,54.99301834998,42.4751162257798,42.3020582538232,49.9516650171536,38.2773022740587,43.5016712624836,40.385304316642,7.68026372122907,8.37952234142165,6.14640980714883,5.34834777550247,4.19226325255965,5.88299227040045,4.66718128383392,3.29656091582231,2.88827288632634,3.79045817645696,3.29523089857312,4.52703219326583,6.18033949301224,6.6586158501064,5.74354689556133,5.23923060411381,6.95305955669133,5.20854895252004,5.76920261124629,5.5935589651071,3.08582327146874,2.8396128985494,4.5302876089991,4.36039249896986,3.85848459702856,4.65380343404221,3.84148743032822,4.47218509444333,4.20992752922171,1.68342681497322,7.47400614182297,7.48634066054282,9.82154503607254,5.42278944150881,3.66522560864169,8.74337022782811,3.50897412668113,3.00819475667618,1.53030665655075,1.98532277207564,1.62307484934295
|short_description=p2@Khdrbs3
}}
}}

Latest revision as of 22:30, 26 September 2015

Short description:p2@Khdrbs3
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Khdrbs3_5end
Coexpression cluster:MCL_coexpression_mm9:2993
Association with transcript: -10bp_to_ENSMUST00000022954, NM_010158, uc007wbf.1_5end
EntrezGene:Khdrbs3
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Khdrbs3

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G76.09
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.35
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I61.36
CD326+ enterocyte, pool1.CNhs13542.11848-124I31.51
CD326+ enterocyte, pool2.CNhs13197.11849-124I41.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I72.52
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I82.10
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.42
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F21.17
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.52
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.20
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A38.93
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.96
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.69
GP2+ M cell, pool1.CNhs13228.11845-124H91.15
GP2+ M cell, pool2.CNhs13231.11846-124I10.86
GP2+ M cell, pool3.CNhs13240.11847-124I21.29
Ileum epithelium, pool1.CNhs13199.10252-104B91.71
Ileum epithelium, pool2.CNhs13232.10253-104C13.53
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C81.77
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F52.02
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F63.99
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F73.06
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.49
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.13
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.18
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B72.35
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C211.34
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B89.23
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C36.03
Mouse Astrocytes, donor2.CNhs12078.11552-120C43.36
Mouse Astrocytes, donor3.CNhs12107.11633-122C45.75
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.73
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C12.83
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E12.58
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C54.13
Mouse Granule cells, donor1.CNhs12131.11713-123C323.27
Mouse Granule cells, donor2.CNhs12357.11731-123E317.99
Mouse Granule cells, donor3.CNhs12108.11636-122C721.55
Mouse Meningeal cells, donor1.CNhs12132.11716-123C62.03
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.45
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.99
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D21.42
Mouse Microglia, donor1.CNhs12629.11718-123C84.49
Mouse Microglia, donor2.CNhs12634.11736-123E88.45
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D537.33
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F527.27
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D928.60
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F118.57
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D516.12
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D224.50
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F224.73
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D625.74
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D36.61
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F318.51
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D716.59
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D422.42
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F425.25
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D819.27
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E414.24
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E512.38
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I623.68
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D617.09
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F617.51
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E124.42
Mouse Schwann, donor1.CNhs12507.11728-123D93.26
Mouse Schwann, donor2.CNhs12573.11746-123F95.44
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G310.44
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F76.02
Mouse hepatocyte, donor1.CNhs13078.11714-123C45.44
Mouse hepatocyte, donor3.CNhs12615.11637-122C82.70
Mouse hepatocyte, donor6.CNhs13090.11822-124F43.25
Mouse hepatocyte, donor8.CNhs13091.11824-124F64.03
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A74.92
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I72.05
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E32.60
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I82.12
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G62.25
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G21.01
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B63.31
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D75.20
adrenal gland, embryo E14.CNhs11038.406-44C55.73
adrenal gland, embryo E16.CNhs11004.1254-43D63.04
adrenal gland, embryo E17.CNhs11043.1263-45I14.15
adrenal gland, embryo E18.CNhs11026.1262-18F52.41
adrenal gland, neonate N00.CNhs11191.1311-23C12.82
adrenal gland, neonate N25.CNhs11223.1377-27I36.91
amnion, adult pregnant day17.5.CNhs10488.583-22A80.49
aorta, adult.CNhs10498.46-23H15.35
bone (os femoris), adult.CNhs10483.56-12G21.77
bone (os femoris), neonate N02.CNhs11227.1985-43F50.97
bone (os femoris), neonate N16.CNhs11225.1525-43A61.99
bone (os femoris), neonate N20.CNhs11195.1350-25C32.91
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B21.46
cerebellum, neonate N30.CNhs11135.1395-42I21.89
colon, adult.CNhs10468.36-18H71.02
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C71.56
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D11.20
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D41.27
corpora quadrigemina, adult.CNhs10501.16-22A48.54
corpus striatum, adult.CNhs10487.19-21D87.78
corpus striatum, neonate N00.CNhs11226.630-43F117.21
cortex, adult.CNhs10473.12-14D531.64
cortex, neonate N30.CNhs11107.1392-42F238.87
diencephalon, adult.CNhs10482.20-12F213.71
diencephalon, neonate N30.CNhs11201.1388-42B214.11
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B14.48
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A21.87
epididymis, adult.CNhs10490.58-23B28.34
eyeball, adult.CNhs10484.31-12G413.26
eyeball, embryo E12.CNhs11016.345-16C67.55
eyeball, embryo E14.CNhs10521.399-16E212.18
eyeball, embryo E15.CNhs10593.426-16C99.54
eyeball, embryo E17.CNhs11023.1261-18D49.34
eyeball, neonate N00.CNhs11207.633-15C613.61
eyeball, neonate N01.CNhs11140.1532-43E711.15
eyeball, neonate N02.CNhs11205.1551-44G818.46
eyeball, neonate N16.CNhs11188.777-19A25.17
forelimb, embryo E11.CNhs10596.335-25E24.74
forelimb, embryo E12.CNhs10600.359-14H22.84
forelimb, embryo E13.CNhs10589.384-1E23.52
forelimb, embryo E14.CNhs10577.413-26A83.73
forelimb, embryo E15.CNhs11007.437-20E70.83
forelimb, embryo E17.CNhs10598.1517-43C42.09
forelimb, embryo E18.CNhs11008.1520-43B51.44
gonad, embryo E13.CNhs11044.1564-45I64.98
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.70
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D21.29
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E910.36
heart, embryo E12.CNhs11015.353-12F55.39
heart, embryo E13.CNhs11013.376-3I96.84
heart, embryo E14.CNhs10597.403-26D49.47
heart, embryo E15.CNhs11017.431-16C87.28
heart, embryo E16.CNhs11021.457-17C68.18
heart, embryo E17.CNhs11025.479-18E58.14
heart, embryo E18.CNhs11030.1283-20G313.15
heart, neonate N00.CNhs11213.639-21E310.04
heart, neonate N03.CNhs11221.1349-25I214.32
heart, neonate N10.CNhs11118.749-24G16.90
heart, neonate N16.CNhs11209.782-15G17.38
heart, neonate N20.CNhs11127.821-26I610.23
heart, neonate N25.CNhs11196.1351-25D37.46
heart, neonate N30.CNhs11202.1390-42D25.91
hippocampus, adult.CNhs10478.13-16E830.49
hippocampus, neonate N00.CNhs11228.627-43G130.15
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.53
intestine, embryo E12.CNhs11019.1251-16I55.76
intestine, embryo E13.CNhs11010.381-16D54.64
intestine, embryo E15.CNhs10602.976-16D84.12
intestine, embryo E16.CNhs10585.463-22H42.62
intestine, embryo E17.CNhs10582.482-18D32.00
intestine, embryo E18.CNhs10526.1289-20F72.66
intestine, neonate N00.CNhs11126.644-26D11.90
intestine, neonate N01.CNhs11192.1322-23E91.65
intestine, neonate N06.CNhs11102.688-20B81.26
intestine, neonate N07.CNhs11095.720-20F21.79
intestine, neonate N10.CNhs11098.755-23A51.75
intestine, neonate N20.CNhs11187.827-18D10.90
intestine, neonate N25.CNhs11121.1352-25E31.08
intestine, neonate N30.CNhs11131.1384-42G10.60
kidney, embryo E14.CNhs10606.411-4I94.55
kidney, embryo E15.CNhs10997.434-16F83.77
kidney, embryo E16.CNhs10584.464-22A54.51
kidney, embryo E17.CNhs11028.483-18I22.65
kidney, embryo E18.CNhs11001.1288-20C73.88
kidney, neonate N00.CNhs11214.646-21G75.61
kidney, neonate N10.CNhs11206.758-6D56.83
kidney, neonate N20.CNhs11113.832-19I13.99
kidney, neonate N25.CNhs11122.1353-25F33.14
kidney, neonate N30.CNhs11203.1385-42H12.96
liver, adult pregnant day01.CNhs10466.508-5B24.74
liver, embryo E12.CNhs10601.355-15F82.34
liver, embryo E13.CNhs10524.378-3H61.77
liver, embryo E14.CNhs10594.409-16E12.70
liver, embryo E15.CNhs10520.433-16D71.01
liver, embryo E16.CNhs10523.462-17F51.45
liver, embryo E17.CNhs10510.481-18A31.78
liver, embryo E18.CNhs10579.499-43G41.15
liver, neonate N00.CNhs11117.641-24F40.97
liver, neonate N03.CNhs11123.1345-25G21.10
liver, neonate N06.CNhs11101.684-20A82.88
liver, neonate N07.CNhs11103.716-20H22.60
liver, neonate N10.CNhs11115.751-24B93.12
liver, neonate N20.CNhs11220.823-25A34.29
liver, neonate N25.CNhs11198.1368-26H13.77
liver, neonate N30.CNhs11106.1382-42D15.31
lung, adult.CNhs10474.28-22B10.92
lung, embryo E12.CNhs10522.354-16G26.44
lung, embryo E14.CNhs10604.404-26F82.44
lung, embryo E15.CNhs11020.432-17C53.06
lung, embryo E16.CNhs10998.458-17B62.35
lung, embryo E17.CNhs10605.480-44A61.51
lung, embryo E18.CNhs10583.1287-20I60.95
lung, neonate N00.CNhs11224.640-42C63.32
lung, neonate N06.CNhs11212.683-20E52.05
lung, neonate N07.CNhs11111.715-19A34.43
lung, neonate N10.CNhs11219.750-23E64.31
lung, neonate N20.CNhs11109.822-18A41.15
lung, neonate N25.CNhs11119.1359-25C72.24
lung, neonate N30.CNhs11133.1394-42H21.45
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B64.92
mammary gland, adult pregnant day19.CNhs10476.588-5H28.00
medulla oblongata, adult.CNhs10477.17-12C28.03
medulla oblongata, neonate N30.CNhs11200.1396-42A39.96
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C22.02
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E18.83
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E28.98
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E37.11
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D74.30
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D84.90
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D95.66
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D46.88
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D54.97
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D65.93
olfactory brain, adult.CNhs10489.18-22I95.46
ovary, adult.CNhs10507.91-2I75.68
ovary, embryo E18.CNhs11040.505-44H73.21
ovary, neonate N00.CNhs11217.1299-22I41.14
oviduct, adult pregnant day01.CNhs10500.988-6G63.79
pancreas, adult.CNhs10486.34-16E41.33
pancreas, embryo E14.CNhs11012.405-44F41.70
pancreas, embryo E15.CNhs11042.1556-45F22.42
pancreas, embryo E16.CNhs11003.460-26E50.94
pancreas, embryo E17.CNhs10599.1558-45G32.36
pancreas, embryo E18.CNhs10580.1535-43I72.15
pancreas, neonate N00.CNhs11105.645-26G91.03
pancreas, neonate N01.CNhs11138.1531-43D71.82
pancreas, neonate N02.CNhs11139.1539-43D80.71
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G87.83
pituitary gland, embryo E12.CNhs11018.346-16E610.80
pituitary gland, embryo E13.CNhs11009.370-44C711.51
pituitary gland, embryo E14.CNhs11037.398-44A510.93
pituitary gland, embryo E15.CNhs10592.427-16B97.09
pituitary gland, embryo E16.CNhs11036.449-43F65.71
pituitary gland, embryo E17.CNhs11039.1265-44F53.62
pituitary gland, neonate N00.CNhs11190.1308-22E92.44
placenta, adult pregnant day10.CNhs10472.539-13I71.64
placenta, adult pregnant day17.CNhs10464.577-18G30.64
prostate, adult.CNhs10470.859-1F85.07
skin, adult.CNhs10492.30-1C30.33
skin, neonate N00.CNhs11124.650-25G40.32
skin, neonate N03.CNhs11215.662-22H30.84
skin, neonate N06.CNhs11097.693-20I50.60
skin, neonate N10.CNhs11108.762-6C40.66
small intestine, neonate N16.CNhs11114.790-21I12.04
spinal cord, adult.CNhs10505.24-13C99.64
spleen, adult.CNhs10465.25-2G21.54
spleen, embryo E16.CNhs11035.461-43C116.92
spleen, embryo E18.CNhs11011.1271-21F26.67
spleen, neonate N10.CNhs11116.752-24D12.26
spleen, neonate N20.CNhs11112.824-19H11.50
spleen, neonate N25.CNhs11099.1354-25G31.37
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C62.38
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C93.22
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D31.38
stomach, adult.CNhs10503.33-1H62.86
stomach, embryo E12.CNhs10588.356-43E39.02
stomach, embryo E15.CNhs10603.1252-16G84.88
stomach, embryo E16.CNhs11022.459-17D45.72
stomach, embryo E17.CNhs11006.1035-18D53.97
stomach, embryo E18.CNhs10999.1286-20C63.49
stomach, neonate N03.CNhs11193.1340-24B83.91
stomach, neonate N07.CNhs11210.718-18A94.71
stomach, neonate N25.CNhs11104.1355-25E43.14
stomach, neonate N30.CNhs11134.1386-42I13.37
submandibular gland, adult.CNhs10469.59-29C10.62
testis, adult.CNhs10504.57-7G510.71
testis, embryo E13.CNhs11031.389-23F53.44
testis, embryo E15.CNhs11034.443-27C53.47
testis, embryo E16.CNhs11033.470-26G54.08
testis, embryo E17.CNhs11029.486-18I54.65
testis, embryo E18.CNhs11027.503-18G52.53
testis, neonate N00.CNhs11189.1300-22B71.64
testis, neonate N07.CNhs11222.726-26I44.43
testis, neonate N10.CNhs11204.763-44D92.41
testis, neonate N20.CNhs11110.839-18H39.90
testis, neonate N30.CNhs11130.1391-42E27.49
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I46.08
thymus, embryo E15.CNhs11005.430-45I22.57
thymus, embryo E16.CNhs11002.456-26C50.65
thymus, embryo E17.CNhs10581.478-18C10.36
thymus, embryo E18.CNhs10595.1273-19G40.40
thymus, neonate N02.CNhs11181.1541-43F80.72
thymus, neonate N03.CNhs11137.2104-43C70.44
thymus, neonate N06.CNhs11197.681-26C40.30
thymus, neonate N07.CNhs11211.713-19D30.15
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.10
thymus, neonate N25.CNhs11125.1362-25G70.29
thymus, neonate N30.CNhs11132.1393-42G20.58
tongue, adult.CNhs10499.32-1B42.95
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H33.33
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.54
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.67
urinary bladder, adult.CNhs10481.879-12E45.99
uterus, adult pregnant day19.CNhs10497.590-15F53.57
uterus, adult.CNhs10509.92-27E52.56
vagina, adult.CNhs10502.89-27D50.43
vesicular gland, adult.CNhs10491.51-27F85.02
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A125.98
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A228.08
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A333.23
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D754.99
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A442.48
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A542.30
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A649.95
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A738.28
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A843.50
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A940.39
whole body, embryo E11.CNhs11014.324-5I87.68
whole body, embryo E12.CNhs10587.857-27C98.38
whole body, embryo E13.CNhs10512.372-23H26.15
whole body, embryo E14.5.CNhs10578.420-27D25.35
whole body, embryo E14.CNhs10519.395-14B14.19
whole body, embryo E16.CNhs10514.453-14F25.88
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G54.67
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G53.30
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G52.89
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G53.79
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G53.30
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G54.53
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G56.18
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G56.66
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G55.74
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G55.24
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G56.95
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G55.21
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G55.77
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G55.59
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G53.09
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G52.84
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G54.53
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G54.36
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G53.86
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G54.65
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G53.84
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G54.47
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G54.21
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.68
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G57.47
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G57.49
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G59.82
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G55.42
whole body, embryo E17.5.CNhs10513.490-9F93.67
whole body, embryo E17.CNhs10517.475-3I58.74
whole body, embryo E18.CNhs10516.493-3B33.51
whole body, neonate N00.CNhs10525.657-19C23.01
whole body, neonate N01.CNhs10576.659-23C61.53
whole body, neonate N06.CNhs10515.692-21D11.99
whole body, neonate N10.CNhs10518.761-6B41.62





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
neural cell5.86e-1543
neuron1.24e-1433
neuronal stem cell1.24e-1433
neuroblast1.24e-1433
electrically signaling cell1.24e-1433
ectodermal cell1.78e-1444
neurectodermal cell1.78e-1444
CNS neuron (sensu Vertebrata)1.19e-1323
neuroblast (sensu Vertebrata)1.19e-1323
electrically responsive cell1.05e-1039
electrically active cell1.05e-1039

Uber anatomy
Ontology termp-valuen
structure with developmental contribution from neural crest1.52e-3192
central nervous system2.81e-2873
nervous system3.92e-2875
neurectoderm8.45e-2864
neural plate8.45e-2864
presumptive neural plate8.45e-2864
ectoderm-derived structure3.00e-2595
ectoderm3.00e-2595
presumptive ectoderm3.00e-2595
pre-chordal neural plate4.99e-2449
regional part of nervous system1.06e-2354
neural tube9.73e-2352
neural rod9.73e-2352
future spinal cord9.73e-2352
neural keel9.73e-2352
ecto-epithelium1.60e-2273
gray matter5.25e-2134
anterior neural tube2.43e-2040
regional part of forebrain5.33e-2039
forebrain5.33e-2039
future forebrain5.33e-2039
brain1.83e-1947
future brain1.83e-1947
regional part of brain2.21e-1946
brain grey matter3.52e-1829
regional part of telencephalon3.52e-1829
telencephalon3.52e-1829
tube1.61e-15114
anatomical conduit8.28e-15122
cerebral cortex4.17e-1421
cerebral hemisphere4.17e-1421
pallium4.17e-1421
regional part of cerebral cortex1.64e-1117
embryo1.63e-08320
occipital lobe3.71e-0810
visual cortex3.71e-0810
neocortex3.71e-0810
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