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FFCP PHASE1:Mm9::chr1:183282749..183282772,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=72978
|EntrezGene=72978
|HGNC=
|HGNC=
|MCL_coexpression_id=2
|TSSclassifier=NA
|UniProt=Q6ZWS4,Q9D6E1,G3XA11
|UniProt=Q6ZWS4,Q9D6E1,G3XA11
|association_with_transcript=0bp_to_ENSMUST00000027795,ENSMUST00000161880,NM_001160211,NM_001160212,NM_028408,uc007dxh.2,uc007dxi.2,uc011wxs.1_5end
|association_with_transcript=0bp_to_ENSMUST00000027795,ENSMUST00000161880,NM_001160211,NM_001160212,NM_028408,uc007dxh.2,uc007dxi.2,uc011wxs.1_5end
|cluster_id=chr1:183282749..183282772,+
|description=CAGE_peak_2_at_Cnih3_5end
|description=CAGE_peak_2_at_Cnih3_5end
|id=chr1:183282749..183282772,+
|id=chr1:183282749..183282772,+
|ontology_enrichment_celltype=CL:0000117!3.50e-14!23;CL:0000337!3.50e-14!23;CL:0000540!1.60e-11!33;CL:0000047!1.60e-11!33;CL:0000031!1.60e-11!33;CL:0000404!1.60e-11!33;CL:0000221!1.09e-09!44;CL:0000133!1.09e-09!44;CL:0002319!1.61e-09!43;CL:0000393!4.23e-08!39;CL:0000211!4.23e-08!39
|ontology_enrichment_celltype=CL:0000117!3.50e-14!23;CL:0000337!3.50e-14!23;CL:0000540!1.60e-11!33;CL:0000047!1.60e-11!33;CL:0000031!1.60e-11!33;CL:0000404!1.60e-11!33;CL:0000221!1.09e-09!44;CL:0000133!1.09e-09!44;CL:0002319!1.61e-09!43;CL:0000393!4.23e-08!39;CL:0000211!4.23e-08!39
|ontology_enrichment_celltype_v019_2=CL:0000117,1.27e-16,23;CL:0000337,1.27e-16,23;CL:0000540,1.89e-11,33;CL:0000047,1.89e-11,33;CL:0000031,1.89e-11,33;CL:0000404,1.89e-11,33;CL:0002609,4.58e-09,6;CL:0000393,6.12e-09,39;CL:0000211,6.12e-09,39;CL:0002319,1.33e-08,43;CL:0000221,2.70e-08,44;CL:0000133,2.70e-08,44
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002020!9.72e-24!34;UBERON:0000073!7.81e-23!75;UBERON:0001016!7.81e-23!75;UBERON:0001017!1.50e-22!73;UBERON:0005743!1.50e-22!73;UBERON:0001049!1.05e-21!52;UBERON:0005068!1.05e-21!52;UBERON:0006241!1.05e-21!52;UBERON:0007135!1.05e-21!52;UBERON:0000955!4.91e-21!50;UBERON:0006238!4.91e-21!50;UBERON:0002791!8.45e-21!29;UBERON:0003528!8.45e-21!29;UBERON:0001893!8.45e-21!29;UBERON:0002616!3.57e-20!49;UBERON:0000033!1.48e-19!63;UBERON:0003080!1.24e-18!40;UBERON:0004121!5.72e-18!102;UBERON:0000924!5.72e-18!102;UBERON:0006601!5.72e-18!102;UBERON:0002780!7.66e-18!39;UBERON:0001890!7.66e-18!39;UBERON:0006240!7.66e-18!39;UBERON:0003056!1.18e-16!49;UBERON:0000956!2.32e-16!21;UBERON:0001869!2.32e-16!21;UBERON:0000203!2.32e-16!21;UBERON:0002346!7.93e-16!71;UBERON:0003075!7.93e-16!71;UBERON:0007284!7.93e-16!71;UBERON:0002619!3.11e-13!17;UBERON:0002021!1.67e-09!10;UBERON:0000411!1.67e-09!10;UBERON:0001950!1.67e-09!10;UBERON:0007811!4.64e-09!86;UBERON:0000153!2.14e-08!94
|ontology_enrichment_uberon=UBERON:0002020!9.72e-24!34;UBERON:0000073!7.81e-23!75;UBERON:0001016!7.81e-23!75;UBERON:0001017!1.50e-22!73;UBERON:0005743!1.50e-22!73;UBERON:0001049!1.05e-21!52;UBERON:0005068!1.05e-21!52;UBERON:0006241!1.05e-21!52;UBERON:0007135!1.05e-21!52;UBERON:0000955!4.91e-21!50;UBERON:0006238!4.91e-21!50;UBERON:0002791!8.45e-21!29;UBERON:0003528!8.45e-21!29;UBERON:0001893!8.45e-21!29;UBERON:0002616!3.57e-20!49;UBERON:0000033!1.48e-19!63;UBERON:0003080!1.24e-18!40;UBERON:0004121!5.72e-18!102;UBERON:0000924!5.72e-18!102;UBERON:0006601!5.72e-18!102;UBERON:0002780!7.66e-18!39;UBERON:0001890!7.66e-18!39;UBERON:0006240!7.66e-18!39;UBERON:0003056!1.18e-16!49;UBERON:0000956!2.32e-16!21;UBERON:0001869!2.32e-16!21;UBERON:0000203!2.32e-16!21;UBERON:0002346!7.93e-16!71;UBERON:0003075!7.93e-16!71;UBERON:0007284!7.93e-16!71;UBERON:0002619!3.11e-13!17;UBERON:0002021!1.67e-09!10;UBERON:0000411!1.67e-09!10;UBERON:0001950!1.67e-09!10;UBERON:0007811!4.64e-09!86;UBERON:0000153!2.14e-08!94
|ontology_enrichment_uberon_v019_2=UBERON:0000073,3.68e-35,54;UBERON:0002020,2.80e-34,34;UBERON:0001049,2.03e-32,52;UBERON:0005068,2.03e-32,52;UBERON:0006241,2.03e-32,52;UBERON:0007135,2.03e-32,52;UBERON:0001017,3.74e-31,73;UBERON:0003528,8.93e-31,29;UBERON:0002791,8.93e-31,29;UBERON:0001893,8.93e-31,29;UBERON:0001016,5.30e-30,75;UBERON:0000955,5.48e-29,47;UBERON:0006238,5.48e-29,47;UBERON:0000956,1.18e-28,21;UBERON:0001869,1.18e-28,21;UBERON:0000203,1.18e-28,21;UBERON:0002616,1.82e-27,46;UBERON:0003080,1.77e-26,40;UBERON:0002780,4.58e-25,39;UBERON:0001890,4.58e-25,39;UBERON:0006240,4.58e-25,39;UBERON:0002346,2.30e-24,64;UBERON:0003075,2.30e-24,64;UBERON:0007284,2.30e-24,64;UBERON:0010371,7.80e-23,73;UBERON:0002619,1.21e-22,17;UBERON:0004121,1.92e-22,95;UBERON:0000924,1.92e-22,95;UBERON:0006601,1.92e-22,95;UBERON:0003056,4.80e-20,49;UBERON:0002021,7.74e-17,10;UBERON:0000411,7.74e-17,10;UBERON:0001950,7.74e-17,10;UBERON:0010314,7.54e-15,92;UBERON:0000025,2.75e-09,114;UBERON:0004111,9.46e-09,122;UBERON:0001954,1.49e-07,7;UBERON:0003022,1.49e-07,7;UBERON:0002421,1.49e-07,7;UBERON:0000349,1.49e-07,7;UBERON:0002600,1.49e-07,7
|phase1_expression=1.44133962394315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.31668831589172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166234645358492,0,0.837063261473815,0,0.523523743973798,0,0,0,0,0,0,0,0,1.09843091367236,0.194429899074283,0,0,0,0,0,0,0,0,1.41621522601718,1.05798195854407,0.633831403506179,0,0,0,0,0,0.299600110518405,0,8.50254820929517,7.69533848490637,8.2026734927039,1.14260393761521,1.76694832761291,2.69479758272899,1.34183659425531,2.75765635983006,2.20231761998777,4.72443150915195,3.5329502648936,0.923204014111357,0.640413505216868,1.04182674111352,0.837548997004143,5.06486349028512,2.90316670775939,0.883885756421003,2.13557521198654,1.86399445825301,0.075726193333184,0.377857800533928,0.289864488701678,0,0,0,0,0,0.421333260395256,0,0,0,0.281686839553361,0,0,0,0,0,0,0.34255163915718,0,0,0,0,0,0,0,0,0.247194967734374,0,0,0,0,0,0,0,1.25668024088073,0,0.11981512450592,0,0,11.5338792341713,8.6925114535539,7.79056983099759,29.0286614721102,22.5029602450691,6.02585329222724,9.5722345209977,0,0,0,0,0,0.229902104433473,0.180062129805349,0.150704817835715,0.0680364991513279,0,0.187403449119458,0.517406741478031,0,0,0,0,1.11218899690239,0.696504333044333,0.205782136407943,0,0,0,0,0,0,0,0,0,0,0,0.268273401399619,0,0,0,0,0,0,0,17.6643556793867,16.1560241435477,0,0,0.639864751605702,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203651327845314,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0.274561413188081,0,0,0,0,0.179397413521912,0,0,0.37898282354097,0,0.339490171550376,0,0.335012514883631,0.952174563544055,0.195133647857799,0.630540576424764,0.664394068946325,0.637819074629948,0,0.345369963731791,0,0,0,1.47529281905711,0,3.69266356971921,2.10981035865966,0,0,0.315508219416257,0,0.646270193198397,0,0,0,0.809621403349789,0,0.395287777946524,22.1711708331047,0,0.178065603667255,0.162886959353576,0.164970122972535,1.32745138339963,0,0.302323556964751,0,0,0,0,0.727067458955011,0.712994756769443,0,0,0,0,0.18006109403131,0.129358683782755,0,0.177340233642274,0,0.164549020602121,0,0,0,0,0.49465875882444,0.161464426695906,0,0.119372344003136,0,0,1.66882771809459,0,0,0,0,0,0,0.339956859987711,0.139951452323658,0,0.954670618015114,0.316335993581135,0.203319467126849,0.108005340821801,0.209088296014469,0.436725127492355,0.404593039154462,0.330613822901344,0.26175594198403,0.129614973291793,0,0,0.149516546043979,0.165458490457098,0,0.258319646955462,0,0.117357238645754,0.2604087696879,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226730383615211,0,0,0,0,0,0,0,0,10.1655331671072,11.0478056761722,10.3121192419091,15.4667864109319,17.1270629942661,12.0863023582352,12.8254275044043,16.6618845192962,15.406841905463,18.6393712230655,0,0,1.02440163452481,0.729320151204882,0.209613162627982,0.735374033800057,1.11123363900808,0.824140228955577,0.962757628775446,1.76888048234658,0.50695859978048,1.13175804831646,1.03005658216871,0.768301828858431,0.746661096422973,1.90517476513229,1.50649623728312,1.35036454324594,0.412085900803307,1.03039244094078,0,0.532427418478012,1.43061713968393,1.0174249164263,0.376437521661322,0.592302255241736,0.548783918618318,0.789209134313529,1.08643291076689,0,1.18635018124174,0.788035859004508,0,0.929621047115796,0.578719832943424,1.49886346762768,0.233931608445408,0.859484216193193,0.382576664137687,0,0
|phase1_expression=1.44133962394315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.31668831589172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166234645358492,0,0.837063261473815,0,0.523523743973798,0,0,0,0,0,0,0,0,1.09843091367236,0.194429899074283,0,0,0,0,0,0,0,0,1.41621522601718,1.05798195854407,0.633831403506179,0,0,0,0,0,0.299600110518405,0,8.50254820929517,7.69533848490637,8.2026734927039,1.14260393761521,1.76694832761291,2.69479758272899,1.34183659425531,2.75765635983006,2.20231761998777,4.72443150915195,3.5329502648936,0.923204014111357,0.640413505216868,1.04182674111352,0.837548997004143,5.06486349028512,2.90316670775939,0.883885756421003,2.13557521198654,1.86399445825301,0.075726193333184,0.377857800533928,0.289864488701678,0,0,0,0,0,0.421333260395256,0,0,0,0.281686839553361,0,0,0,0,0,0,0.34255163915718,0,0,0,0,0,0,0,0,0.247194967734374,0,0,0,0,0,0,0,1.25668024088073,0,0.11981512450592,0,0,11.5338792341713,8.6925114535539,7.79056983099759,29.0286614721102,22.5029602450691,6.02585329222724,9.5722345209977,0,0,0,0,0,0.229902104433473,0.180062129805349,0.150704817835715,0.0680364991513279,0,0.187403449119458,0.517406741478031,0,0,0,0,1.11218899690239,0.696504333044333,0.205782136407943,0,0,0,0,0,0,0,0,0,0,0,0.268273401399619,0,0,0,0,0,0,0,17.6643556793867,16.1560241435477,0,0,0.639864751605702,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203651327845314,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0.274561413188081,0,0,0,0,0.179397413521912,0,0,0.37898282354097,0,0.339490171550376,0,0.335012514883631,0.952174563544055,0.195133647857799,0.630540576424764,0.664394068946325,0.637819074629948,0,0.345369963731791,0,0,0,1.47529281905711,0,3.69266356971921,2.10981035865966,0,0,0.315508219416257,0,0.646270193198397,0,0,0,0.809621403349789,0,0.395287777946524,22.1711708331047,0,0.178065603667255,0.162886959353576,0.164970122972535,1.32745138339963,0,0.302323556964751,0,0,0,0,0.727067458955011,0.712994756769443,0,0,0,0,0.18006109403131,0.129358683782755,0,0.177340233642274,0,0.164549020602121,0,0,0,0,0.49465875882444,0.161464426695906,0,0.119372344003136,0,0,1.66882771809459,0,0,0,0,0,0,0.339956859987711,0.139951452323658,0,0.954670618015114,0.316335993581135,0.203319467126849,0.108005340821801,0.209088296014469,0.436725127492355,0.404593039154462,0.330613822901344,0.26175594198403,0.129614973291793,0,0,0.149516546043979,0.165458490457098,0,0.258319646955462,0,0.117357238645754,0.2604087696879,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226730383615211,0,0,0,0,0,0,0,0,10.1655331671072,11.0478056761722,10.3121192419091,15.4667864109319,17.1270629942661,12.0863023582352,12.8254275044043,16.6618845192962,15.406841905463,18.6393712230655,0,0,1.02440163452481,0.729320151204882,0.209613162627982,0.735374033800057,1.11123363900808,0.824140228955577,0.962757628775446,1.76888048234658,0.50695859978048,1.13175804831646,1.03005658216871,0.768301828858431,0.746661096422973,1.90517476513229,1.50649623728312,1.35036454324594,0.412085900803307,1.03039244094078,0,0.532427418478012,1.43061713968393,1.0174249164263,0.376437521661322,0.592302255241736,0.548783918618318,0.789209134313529,1.08643291076689,0,1.18635018124174,0.788035859004508,0,0.929621047115796,0.578719832943424,1.49886346762768,0.233931608445408,0.859484216193193,0.382576664137687,0,0
|short_description=p2@Cnih3
|short_description=p2@Cnih3
}}
}}

Latest revision as of 22:35, 26 September 2015

Short description:p2@Cnih3
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Cnih3_5end
Coexpression cluster:MCL_coexpression_mm9:2
Association with transcript: 0bp_to_ENSMUST00000027795, ENSMUST00000161880, NM_001160211, NM_001160212, NM_028408, uc007dxh.2, uc007dxi.2, uc011wxs.1_5end
EntrezGene:Cnih3
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Cnih3

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G71.44
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A33.32
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.17
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.84
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.52
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B81.10
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.19
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C31.42
Mouse Granule cells, donor2.CNhs12357.11731-123E31.06
Mouse Granule cells, donor3.CNhs12108.11636-122C70.63
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.30
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D58.50
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F57.70
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D98.20
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F11.14
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D51.77
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D22.69
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F21.34
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D62.76
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D32.20
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F34.72
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D73.53
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.92
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.64
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D81.04
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.84
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E55.06
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I62.90
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.88
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F62.14
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E11.86
Mouse Schwann, donor1.CNhs12507.11728-123D90.08
Mouse Schwann, donor2.CNhs12573.11746-123F90.38
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.29
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.42
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.28
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.34
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C50.00
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.00
adrenal gland, neonate N00.CNhs11191.1311-23C10.00
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.25
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I21.26
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.12
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A411.53
corpus striatum, adult.CNhs10487.19-21D88.69
corpus striatum, neonate N00.CNhs11226.630-43F17.79
cortex, adult.CNhs10473.12-14D529.03
cortex, neonate N30.CNhs11107.1392-42F222.50
diencephalon, adult.CNhs10482.20-12F26.03
diencephalon, neonate N30.CNhs11201.1388-42B29.57
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.00
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.00
eyeball, embryo E12.CNhs11016.345-16C60.00
eyeball, embryo E14.CNhs10521.399-16E20.23
eyeball, embryo E15.CNhs10593.426-16C90.18
eyeball, embryo E17.CNhs11023.1261-18D40.15
eyeball, neonate N00.CNhs11207.633-15C60.07
eyeball, neonate N01.CNhs11140.1532-43E70.00
eyeball, neonate N02.CNhs11205.1551-44G80.19
eyeball, neonate N16.CNhs11188.777-19A20.52
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E71.11
forelimb, embryo E17.CNhs10598.1517-43C40.70
forelimb, embryo E18.CNhs11008.1520-43B50.21
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.27
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E817.66
hippocampus, neonate N00.CNhs11228.627-43G116.16
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.64
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.00
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.00
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.20
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.07
kidney, neonate N10.CNhs11206.758-6D50.00
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.27
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.18
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.38
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.34
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.34
lung, embryo E18.CNhs10583.1287-20I60.95
lung, neonate N00.CNhs11224.640-42C60.20
lung, neonate N06.CNhs11212.683-20E50.63
lung, neonate N07.CNhs11111.715-19A30.66
lung, neonate N10.CNhs11219.750-23E60.64
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.35
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B61.48
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C23.69
medulla oblongata, neonate N30.CNhs11200.1396-42A32.11
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.32
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.65
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.81
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.40
olfactory brain, adult.CNhs10489.18-22I922.17
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H70.18
ovary, neonate N00.CNhs11217.1299-22I40.16
oviduct, adult pregnant day01.CNhs10500.988-6G60.16
pancreas, adult.CNhs10486.34-16E41.33
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.30
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.73
pancreas, neonate N02.CNhs11139.1539-43D80.71
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.18
pituitary gland, embryo E13.CNhs11009.370-44C70.13
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B90.18
pituitary gland, embryo E16.CNhs11036.449-43F60.00
pituitary gland, embryo E17.CNhs11039.1265-44F50.16
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.49
skin, neonate N00.CNhs11124.650-25G40.16
skin, neonate N03.CNhs11215.662-22H30.00
skin, neonate N06.CNhs11097.693-20I50.12
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C91.67
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.34
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.14
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E30.32
stomach, embryo E15.CNhs10603.1252-16G80.20
stomach, embryo E16.CNhs11022.459-17D40.11
stomach, embryo E17.CNhs11006.1035-18D50.21
stomach, embryo E18.CNhs10999.1286-20C60.44
stomach, neonate N03.CNhs11193.1340-24B80.40
stomach, neonate N07.CNhs11210.718-18A90.33
stomach, neonate N25.CNhs11104.1355-25E40.26
stomach, neonate N30.CNhs11134.1386-42I10.13
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.15
testis, embryo E15.CNhs11034.443-27C50.17
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.26
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.12
testis, neonate N07.CNhs11222.726-26I40.26
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.23
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A110.17
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A211.05
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A310.31
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D715.47
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A417.13
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A512.09
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A612.83
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A716.66
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A815.41
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A918.64
whole body, embryo E11.CNhs11014.324-5I80.00
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H21.02
whole body, embryo E14.5.CNhs10578.420-27D20.73
whole body, embryo E14.CNhs10519.395-14B10.21
whole body, embryo E16.CNhs10514.453-14F20.74
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.11
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.96
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.77
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.13
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.77
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.75
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G51.91
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.51
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.35
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.43
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.02
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.38
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.59
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.55
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.79
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.09
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.19
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.79
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.93
whole body, embryo E17.5.CNhs10513.490-9F90.58
whole body, embryo E17.CNhs10517.475-3I51.50
whole body, embryo E18.CNhs10516.493-3B30.23
whole body, neonate N00.CNhs10525.657-19C20.86
whole body, neonate N01.CNhs10576.659-23C60.38
whole body, neonate N06.CNhs10515.692-21D10.00
whole body, neonate N10.CNhs10518.761-6B40.00





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
regional part of nervous system3.68e-3554
gray matter2.80e-3434
neural tube2.03e-3252
neural rod2.03e-3252
future spinal cord2.03e-3252
neural keel2.03e-3252
central nervous system3.74e-3173
brain grey matter8.93e-3129
regional part of telencephalon8.93e-3129
telencephalon8.93e-3129
nervous system5.30e-3075
brain5.48e-2947
future brain5.48e-2947
cerebral cortex1.18e-2821
cerebral hemisphere1.18e-2821
pallium1.18e-2821
regional part of brain1.82e-2746
anterior neural tube1.77e-2640
regional part of forebrain4.58e-2539
forebrain4.58e-2539
future forebrain4.58e-2539
neurectoderm2.30e-2464
neural plate2.30e-2464
presumptive neural plate2.30e-2464
ecto-epithelium7.80e-2373
regional part of cerebral cortex1.21e-2217
ectoderm-derived structure1.92e-2295
ectoderm1.92e-2295
presumptive ectoderm1.92e-2295
pre-chordal neural plate4.80e-2049
occipital lobe7.74e-1710
visual cortex7.74e-1710
neocortex7.74e-1710
structure with developmental contribution from neural crest7.54e-1592
tube2.75e-09114
anatomical conduit9.46e-09122
Ammon's horn1.49e-077
lobe parts of cerebral cortex1.49e-077
hippocampal formation1.49e-077
limbic system1.49e-077
limbic lobe1.49e-077
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