FFCP PHASE1:Mm9::chr4:41587133..41587170,-: Difference between revisions
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{{FFCP|EntrezGene=69638|HGNC=|MCL_coexpression_id=747|UniProt=Q8C7D8,Q8K1D8|association_with_transcript=164bp_to_NM_027147,uc008sjd.2_5end|description=CAGE_peak_2_at_Enho_5end|id=chr4:41587133..41587170,-|ontology_enrichment_celltype=CL:0000117!6.77e-14!23;CL:0000337!6.77e-14!23;CL:0000221!8.27e-14!44;CL:0000133!8.27e-14!44;CL:0002319!2.93e-13!43;CL:0000540!1.74e-12!33;CL:0000047!1.74e-12!33;CL:0000031!1.74e-12!33;CL:0000404!1.74e-12!33;CL:0000055!7.27e-11!50;CL:0000393!1.08e-09!39;CL:0000211!1.08e-09!39|ontology_enrichment_celltype_v019_2=CL:0000117,6.64e-15,23;CL:0000337,6.64e-15,23;CL:0000221,2.25e-14,44;CL:0000133,2.25e-14,44;CL:0002319,8.74e-14,43;CL:0000540,4.93e-13,33;CL:0000047,4.93e-13,33;CL:0000031,4.93e-13,33;CL:0000404,4.93e-13,33;CL:0000393,6.01e-10,39;CL:0000211,6.01e-10,39;CL:0002321,8.13e-07,70|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!1.27e-25!73;UBERON:0005743!1.27e-25!73;UBERON:0000073!3.99e-24!75;UBERON:0001016!3.99e-24!75;UBERON:0001049!6.42e-20!52;UBERON:0005068!6.42e-20!52;UBERON:0006241!6.42e-20!52;UBERON:0007135!6.42e-20!52;UBERON:0004121!1.21e-19!102;UBERON:0000924!1.21e-19!102;UBERON:0006601!1.21e-19!102;UBERON:0000955!1.66e-18!50;UBERON:0006238!1.66e-18!50;UBERON:0000033!1.90e-18!63;UBERON:0002616!6.43e-18!49;UBERON:0002346!1.30e-16!71;UBERON:0003075!1.30e-16!71;UBERON:0007284!1.30e-16!71;UBERON:0002020!2.57e-16!34;UBERON:0003080!3.01e-13!40;UBERON:0003056!4.68e-13!49;UBERON:0002791!5.59e-13!29;UBERON:0003528!5.59e-13!29;UBERON:0001893!5.59e-13!29;UBERON:0002780!8.86e-13!39;UBERON:0001890!8.86e-13!39;UBERON:0006240!8.86e-13!39;UBERON:0004111!1.88e-11!122;UBERON:0000025!1.83e-10!114;UBERON:0000956!9.72e-09!21;UBERON:0001869!9.72e-09!21;UBERON:0000203!9.72e-09!21;UBERON:0007811!3.98e-08!86;UBERON:0002619!1.05e-07!17;UBERON:0003076!1.08e-07!12;UBERON:0003057!1.08e-07!12|ontology_enrichment_uberon_v019_2=UBERON:0001017,4.85e-26,73;UBERON:0001016,2.31e-24,75;UBERON:0000073,9.17e-22,54;UBERON:0004121,4.78e-21,95;UBERON:0000924,4.78e-21,95;UBERON:0006601,4.78e-21,95;UBERON:0001049,3.17e-20,52;UBERON:0005068,3.17e-20,52;UBERON:0006241,3.17e-20,52;UBERON:0007135,3.17e-20,52;UBERON:0002346,6.86e-19,64;UBERON:0003075,6.86e-19,64;UBERON:0007284,6.86e-19,64;UBERON:0002020,1.59e-17,34;UBERON:0010371,2.16e-17,73;UBERON:0000955,1.31e-16,47;UBERON:0006238,1.31e-16,47;UBERON:0002616,5.28e-16,46;UBERON:0003528,6.51e-14,29;UBERON:0002791,6.51e-14,29;UBERON:0001893,6.51e-14,29;UBERON:0003080,3.88e-13,40;UBERON:0003056,5.01e-13,49;UBERON:0002780,1.22e-12,39;UBERON:0001890,1.22e-12,39;UBERON:0006240,1.22e-12,39;UBERON:0010314,2.51e-10,92;UBERON:0004111,6.69e-10,122;UBERON:0000956,2.51e-09,21;UBERON:0001869,2.51e-09,21;UBERON:0000203,2.51e-09,21;UBERON:0000025,2.78e-09,114;UBERON:0002619,3.29e-08,17;UBERON:0003076,3.38e-08,12;UBERON:0003057,3.38e-08,12|phase1_expression=10.4096750618116,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.404950534779652,0,0,0.137114433605739,0,3.48677489619386,7.94327609607082,8.097193463307,0.159992422793407,0,0,0,0,0.190023419456374,0,0,0,0,0,0,0.166234645358492,0,0,0,0,0,0.683045484958446,0,0.377690453926732,0.101376931219515,0.367093504323363,7.82391344348039,1.96222640742402,7.24964403023757,4.6663175777828,1.25987779462826,4.31257693094915,0,0,0,2.57259436035947,0.573066879877513,2.06268836910977,18.2084814773638,12.6957835025288,17.747279298173,5.42151251310611,2.66788438833342,2.2497492932035,0,0,15.8788058574755,24.974189845901,3.94020526772215,4.45519596494579,4.41682418837902,35.1350710816678,27.1668305370485,8.94182834269164,6.42164655822184,6.43453150627015,16.5173821499083,18.8977260366078,21.1977015893616,14.3756053625911,11.3444678066988,11.4600941522487,31.2684958881547,21.9477417912355,22.3085441754143,15.3206864446307,17.7964600998879,17.5215479075783,0.302904773332736,0.453429360640713,2.31891590961342,2.58127163094416,11.5595126730318,14.5719861742211,1.29955283489534,1.79210754838934,3.5111105032938,0.170430322578058,0.259786004602869,0.35333957451034,12.6759077799012,2.56652954828636,2.54805239706646,0,0.649473123033642,1.01343946190039,0.505524445014783,4.11061966988616,0,0.742210695324124,1.56136794089522,0.913396434936424,0.691846491768175,1.3565037649736,1.41106448562846,0.502666365318702,1.23597483867187,0.144599356919912,0,4.36770494858005,0.662524555381181,1.45462575940567,3.72783522436244,12.8823550685081,15.4990563041957,0.255457055208591,0.239630249011841,0,0,8.23848516726525,3.66000482254901,9.5497307605777,6.95297280769106,5.62574006126727,16.8308316093244,10.3834408363365,1.52759045775474,0.622034853050465,0,1.89397670297827,1.30120442962704,2.75882525320168,1.98068342785884,1.9591626318643,2.78949646520444,2.17793324484245,3.5606655332697,2.32833033665114,0.862271971731369,1.51284864134255,1.23165786914764,1.97276159184817,0.278047249225598,0.696504333044333,0.411564272815887,0.796137067273973,0,0,0.284163499395593,0.828503090142008,0.703578179943289,0.720248245844059,0.473489471170421,0.590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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=69638 | |||
|HGNC= | |||
|MCL_coexpression_id=747 | |||
|TSSclassifier=NA | |||
|UniProt=Q8C7D8,Q8K1D8 | |||
|association_with_transcript=164bp_to_NM_027147,uc008sjd.2_5end | |||
|cluster_id=chr4:41587133..41587170,- | |||
|description=CAGE_peak_2_at_Enho_5end | |||
|id=chr4:41587133..41587170,- | |||
|ontology_enrichment_celltype=CL:0000117!6.77e-14!23;CL:0000337!6.77e-14!23;CL:0000221!8.27e-14!44;CL:0000133!8.27e-14!44;CL:0002319!2.93e-13!43;CL:0000540!1.74e-12!33;CL:0000047!1.74e-12!33;CL:0000031!1.74e-12!33;CL:0000404!1.74e-12!33;CL:0000055!7.27e-11!50;CL:0000393!1.08e-09!39;CL:0000211!1.08e-09!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,6.64e-15,23;CL:0000337,6.64e-15,23;CL:0000221,2.25e-14,44;CL:0000133,2.25e-14,44;CL:0002319,8.74e-14,43;CL:0000540,4.93e-13,33;CL:0000047,4.93e-13,33;CL:0000031,4.93e-13,33;CL:0000404,4.93e-13,33;CL:0000393,6.01e-10,39;CL:0000211,6.01e-10,39;CL:0002321,8.13e-07,70 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.27e-25!73;UBERON:0005743!1.27e-25!73;UBERON:0000073!3.99e-24!75;UBERON:0001016!3.99e-24!75;UBERON:0001049!6.42e-20!52;UBERON:0005068!6.42e-20!52;UBERON:0006241!6.42e-20!52;UBERON:0007135!6.42e-20!52;UBERON:0004121!1.21e-19!102;UBERON:0000924!1.21e-19!102;UBERON:0006601!1.21e-19!102;UBERON:0000955!1.66e-18!50;UBERON:0006238!1.66e-18!50;UBERON:0000033!1.90e-18!63;UBERON:0002616!6.43e-18!49;UBERON:0002346!1.30e-16!71;UBERON:0003075!1.30e-16!71;UBERON:0007284!1.30e-16!71;UBERON:0002020!2.57e-16!34;UBERON:0003080!3.01e-13!40;UBERON:0003056!4.68e-13!49;UBERON:0002791!5.59e-13!29;UBERON:0003528!5.59e-13!29;UBERON:0001893!5.59e-13!29;UBERON:0002780!8.86e-13!39;UBERON:0001890!8.86e-13!39;UBERON:0006240!8.86e-13!39;UBERON:0004111!1.88e-11!122;UBERON:0000025!1.83e-10!114;UBERON:0000956!9.72e-09!21;UBERON:0001869!9.72e-09!21;UBERON:0000203!9.72e-09!21;UBERON:0007811!3.98e-08!86;UBERON:0002619!1.05e-07!17;UBERON:0003076!1.08e-07!12;UBERON:0003057!1.08e-07!12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,4.85e-26,73;UBERON:0001016,2.31e-24,75;UBERON:0000073,9.17e-22,54;UBERON:0004121,4.78e-21,95;UBERON:0000924,4.78e-21,95;UBERON:0006601,4.78e-21,95;UBERON:0001049,3.17e-20,52;UBERON:0005068,3.17e-20,52;UBERON:0006241,3.17e-20,52;UBERON:0007135,3.17e-20,52;UBERON:0002346,6.86e-19,64;UBERON:0003075,6.86e-19,64;UBERON:0007284,6.86e-19,64;UBERON:0002020,1.59e-17,34;UBERON:0010371,2.16e-17,73;UBERON:0000955,1.31e-16,47;UBERON:0006238,1.31e-16,47;UBERON:0002616,5.28e-16,46;UBERON:0003528,6.51e-14,29;UBERON:0002791,6.51e-14,29;UBERON:0001893,6.51e-14,29;UBERON:0003080,3.88e-13,40;UBERON:0003056,5.01e-13,49;UBERON:0002780,1.22e-12,39;UBERON:0001890,1.22e-12,39;UBERON:0006240,1.22e-12,39;UBERON:0010314,2.51e-10,92;UBERON:0004111,6.69e-10,122;UBERON:0000956,2.51e-09,21;UBERON:0001869,2.51e-09,21;UBERON:0000203,2.51e-09,21;UBERON:0000025,2.78e-09,114;UBERON:0002619,3.29e-08,17;UBERON:0003076,3.38e-08,12;UBERON:0003057,3.38e-08,12 | |||
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| |||
|short_description=p2@Enho | |||
}} |
Latest revision as of 23:35, 26 September 2015
Short description: | p2@Enho |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Enho_5end |
Coexpression cluster: | MCL_coexpression_mm9:747 |
Association with transcript: | 164bp_to_NM_027147, uc008sjd.2_5end |
EntrezGene: | Enho |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 6.64e-15 | 23 |
neuroblast (sensu Vertebrata) | 6.64e-15 | 23 |
ectodermal cell | 2.25e-14 | 44 |
neurectodermal cell | 2.25e-14 | 44 |
neural cell | 8.74e-14 | 43 |
neuron | 4.93e-13 | 33 |
neuronal stem cell | 4.93e-13 | 33 |
neuroblast | 4.93e-13 | 33 |
electrically signaling cell | 4.93e-13 | 33 |
electrically responsive cell | 6.01e-10 | 39 |
electrically active cell | 6.01e-10 | 39 |
embryonic cell | 8.13e-07 | 70 |