FFCP PHASE1:Mm9::chr9:63869705..63869713,-: Difference between revisions
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m (moved FFCP PHASE1 mm9::chr9:63869705..63869713,- to FFCP PHASE1:Mm9::chr9:63869705..63869713,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=17130 | |EntrezGene=17130 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1855 | |||
|TSSclassifier=NA | |||
|UniProt=O35182 | |UniProt=O35182 | ||
|association_with_transcript=152bp_to_ENSMUST00000041029,NM_008542,uc009qbk.2_5end | |||
|cluster_id=chr9:63869705..63869713,- | |||
|description=CAGE_peak_8_at_Smad6_5end | |||
|id=chr9:63869705..63869713,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,2.92e-09,7;CL:0002494,1.56e-08,3;CL:0000737,1.56e-08,3;CL:0000746,1.56e-08,3;CL:0000513,1.56e-08,3;CL:0000680,4.31e-07,6;CL:0000187,4.31e-07,6;CL:0000056,4.31e-07,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004535!6.01e-09!23;UBERON:0001009!6.01e-09!23;UBERON:0002048!3.09e-08!14;UBERON:0000117!3.09e-08!14;UBERON:0000171!3.09e-08!14;UBERON:0000170!3.09e-08!14;UBERON:0005597!3.09e-08!14;UBERON:0000118!3.09e-08!14;UBERON:0007100!1.24e-07!18;UBERON:0000948!1.24e-07!18;UBERON:0005498!1.24e-07!18;UBERON:0004140!1.24e-07!18;UBERON:0009881!1.24e-07!18;UBERON:0004141!1.24e-07!18;UBERON:0003084!1.24e-07!18;UBERON:0007005!1.24e-07!18;UBERON:0004139!1.24e-07!18;UBERON:0004291!1.24e-07!18;UBERON:0005178!2.06e-07!17;UBERON:0005181!2.06e-07!17;UBERON:0002224!2.06e-07!17;UBERON:0000915!2.06e-07!17;UBERON:0008947!2.06e-07!17;UBERON:0003258!2.06e-07!17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002048,4.35e-17,14;UBERON:0000117,4.35e-17,14;UBERON:0000171,4.35e-17,14;UBERON:0000170,4.35e-17,14;UBERON:0005597,4.35e-17,14;UBERON:0000118,4.35e-17,14;UBERON:0005153,1.06e-13,17;UBERON:0005178,1.06e-13,17;UBERON:0005181,1.06e-13,17;UBERON:0002224,1.06e-13,17;UBERON:0000915,1.06e-13,17;UBERON:0008947,1.06e-13,17;UBERON:0003258,1.06e-13,17;UBERON:0005157,2.46e-11,20;UBERON:0004535,4.66e-11,23;UBERON:0001009,4.66e-11,23;UBERON:0007100,1.17e-09,18;UBERON:0000948,1.17e-09,18;UBERON:0005498,1.17e-09,18;UBERON:0004140,1.17e-09,18;UBERON:0009881,1.17e-09,18;UBERON:0004141,1.17e-09,18;UBERON:0003084,1.17e-09,18;UBERON:0007005,1.17e-09,18;UBERON:0004139,1.17e-09,18;UBERON:0004291,1.17e-09,18;UBERON:0001048,7.04e-09,134;UBERON:0000025,1.96e-08,114;UBERON:0004111,2.59e-08,122;UBERON:0002100,1.34e-07,90;UBERON:0004872,4.92e-07,33;UBERON:0000065,7.45e-07,41 | |||
|phase1_expression=0,0.348975407639361,0,0,0,0.33575854382378,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.595303031057488,0,0,0,0.22940928106717,1.14846392823004,0,0.215471232685889,0.190023419456374,0,0.221730510655305,0,0,0,0,0,0.204169356262369,0,0,0,0,0,0,1.51076181570693,0.912392380975631,0.183546752161682,2.34717403304412,1.09012578190223,1.75748946187577,0.777719596297134,0.419959264876088,0,0,0,0,1.80081605225163,1.71920063963254,3.6097046459421,0.202316460859598,0,0,0,0,0.899899717281399,0,0.7104801149461,0.299600110518405,0.768436610643109,0.103689612308478,0.135005938331691,0,0,0,0,0.0958454710182364,0,0,0.127687338085188,0,0,0,0,0.279182999001381,0,0,0.294628585473668,0.142371680799103,0,0.454357159999104,0.151143120213571,2.6087803983151,0,0,0,0.649776417447669,0,0,0.852151612890289,1.03914401841148,0.35333957451034,0.704217098883403,3.84979432242953,2.54805239706646,0,0.432982082022428,0,0.505524445014783,0.11418387971906,0,0,0.867426633830679,0.608930956624282,0.461230994512117,0.150722640552623,1.05829836422134,0,0,0.289198713839823,0,0.161766849947409,0.662524555381181,0,0,0,0,0.255457055208591,0.239630249011841,0,0,0.149790639404823,0,0,0,0,0.20778804455956,0.162241263067758,0.407357455401265,0.497627882440372,0,0,0.260240885925407,0.459804208866946,0,0.452114453507145,0.680364991513279,0.2562274405697,0.468508622798644,0,0.215567992932842,0.756424320671277,0.527853372491847,0.219195732427575,1.11218899690239,0,0.61734640922383,2.18937693500343,0,0,0,3.31401236056803,1.87620847984877,1.2604344302271,0.710234206755631,0.590292695242212,1.07986979021165,0.465067889500816,1.07309360559848,1.40118410840603,0.658239399653922,0.32833492815819,0.405344047729279,0.438599962275997,0.219550115291051,0.402619256281115,0,0.102904612379284,0.330418782983798,0,0.639864751605702,0.696710015581316,0.257734922644187,0.80673409849337,0.444756087689741,0.570676878337677,0.474529061544512,0.164698954724011,0.251335208800269,0.596869416123452,0.19496408711912,0,0.216138049874694,0.597423819763102,0.948339504765408,0.228497025219458,1.1270773567308,0.407302655690628,0.775809948670503,0.771494018793504,0.442655759869801,0.295220295959204,0,0,0.296452627087149,0.333690211432188,0.393117990226406,0.224862112384854,0.202860121388503,0,0,0,0.810676133875177,0.549122826376163,0,0,0.624075346229121,0.252578877947112,0,1.4473305640901,2.40179147216586,1.89491411770485,0.651859905768103,0.339490171550376,1.17345124144251,0.670025029767263,0.238043640886014,2.53673742215138,2.20689201748667,3.32197034473162,1.2756381492599,3.60499292374624,2.59027472798843,2.16973587872267,0,0,0,0,0,0,0.163934945376675,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0.488660878060728,0.164970122972535,1.32745138339963,0.728341908464944,0,0.188605079755898,0.885905678642318,0.307435147943927,0.516856586336442,0,0.356497378384721,0,1.05418608574999,0,0,0.720244376125241,0.517434735131018,0.857348140126369,0.177340233642274,0.535106452806212,0.658196082408484,0.913394847343798,0.23467170806371,0.847328283455281,0.441056796109924,0.16488625294148,0,0.301564624640779,0.835606408021955,0.492422699235184,0.291480836629851,0,0,0.206386867963223,0.185194527369712,0,0,0,0.509935289981566,0.69975726161829,0.552799895217695,0.954670618015114,0.316335993581135,0.203319467126849,0,0.836353184057875,0.436725127492355,0.134864346384821,0.495920734352016,0,0.259229946583586,0,0,0.747582730219894,0.165458490457098,0.194451188344048,0.516639293910924,0.506868376472335,0.938857909166032,0.13020438484395,0.104859344425711,0,0,0,0.202725215290164,0.205421914329655,0.129920822977795,0,0.198681354781265,0.120195449519969,0,0,0.0762068066549998,0,0,0,0,0.226730383615211,0.221985953374065,0.179427713218951,0.335769232728157,0.19318959403219,0,0.183151624267265,0,1.00314420807073,0,0,0,0,0,0,0,0,0.453142408984205,0,0.31136204275253,0.798049746802062,0.170733605754134,0.243106717068294,0,0.183843508450014,0.44449345560323,0.206035057238894,0,0.252697211763798,0.50695859978048,0.754505365544305,0.468207537349412,0.192075457214608,0.229741875822453,0,0.347652977834566,0.77163688185482,0,0.441596760403192,0.342869252385415,0,0,0.726732083161643,0.282328141245992,0.338458431566706,0,0,0.543216455383447,0,0.118635018124174,0.0985044823755635,0.409231043169689,0.309873682371932,0.385813221962283,0.499621155875892,0,1.28922632428979,0.765153328275374,0.220591419119515,0.463735671240843 | |phase1_expression=0,0.348975407639361,0,0,0,0.33575854382378,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.595303031057488,0,0,0,0.22940928106717,1.14846392823004,0,0.215471232685889,0.190023419456374,0,0.221730510655305,0,0,0,0,0,0.204169356262369,0,0,0,0,0,0,1.51076181570693,0.912392380975631,0.183546752161682,2.34717403304412,1.09012578190223,1.75748946187577,0.777719596297134,0.419959264876088,0,0,0,0,1.80081605225163,1.71920063963254,3.6097046459421,0.202316460859598,0,0,0,0,0.899899717281399,0,0.7104801149461,0.299600110518405,0.768436610643109,0.103689612308478,0.135005938331691,0,0,0,0,0.0958454710182364,0,0,0.127687338085188,0,0,0,0,0.279182999001381,0,0,0.294628585473668,0.142371680799103,0,0.454357159999104,0.151143120213571,2.6087803983151,0,0,0,0.649776417447669,0,0,0.852151612890289,1.03914401841148,0.35333957451034,0.704217098883403,3.84979432242953,2.54805239706646,0,0.432982082022428,0,0.505524445014783,0.11418387971906,0,0,0.867426633830679,0.608930956624282,0.461230994512117,0.150722640552623,1.05829836422134,0,0,0.289198713839823,0,0.161766849947409,0.662524555381181,0,0,0,0,0.255457055208591,0.239630249011841,0,0,0.149790639404823,0,0,0,0,0.20778804455956,0.162241263067758,0.407357455401265,0.497627882440372,0,0,0.260240885925407,0.459804208866946,0,0.452114453507145,0.680364991513279,0.2562274405697,0.468508622798644,0,0.215567992932842,0.756424320671277,0.527853372491847,0.219195732427575,1.11218899690239,0,0.61734640922383,2.18937693500343,0,0,0,3.31401236056803,1.87620847984877,1.2604344302271,0.710234206755631,0.590292695242212,1.07986979021165,0.465067889500816,1.07309360559848,1.40118410840603,0.658239399653922,0.32833492815819,0.405344047729279,0.438599962275997,0.219550115291051,0.402619256281115,0,0.102904612379284,0.330418782983798,0,0.639864751605702,0.696710015581316,0.257734922644187,0.80673409849337,0.444756087689741,0.570676878337677,0.474529061544512,0.164698954724011,0.251335208800269,0.596869416123452,0.19496408711912,0,0.216138049874694,0.597423819763102,0.948339504765408,0.228497025219458,1.1270773567308,0.407302655690628,0.775809948670503,0.771494018793504,0.442655759869801,0.295220295959204,0,0,0.296452627087149,0.333690211432188,0.393117990226406,0.224862112384854,0.202860121388503,0,0,0,0.810676133875177,0.549122826376163,0,0,0.624075346229121,0.252578877947112,0,1.4473305640901,2.40179147216586,1.89491411770485,0.651859905768103,0.339490171550376,1.17345124144251,0.670025029767263,0.238043640886014,2.53673742215138,2.20689201748667,3.32197034473162,1.2756381492599,3.60499292374624,2.59027472798843,2.16973587872267,0,0,0,0,0,0,0.163934945376675,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0.488660878060728,0.164970122972535,1.32745138339963,0.728341908464944,0,0.188605079755898,0.885905678642318,0.307435147943927,0.516856586336442,0,0.356497378384721,0,1.05418608574999,0,0,0.720244376125241,0.517434735131018,0.857348140126369,0.177340233642274,0.535106452806212,0.658196082408484,0.913394847343798,0.23467170806371,0.847328283455281,0.441056796109924,0.16488625294148,0,0.301564624640779,0.835606408021955,0.492422699235184,0.291480836629851,0,0,0.206386867963223,0.185194527369712,0,0,0,0.509935289981566,0.69975726161829,0.552799895217695,0.954670618015114,0.316335993581135,0.203319467126849,0,0.836353184057875,0.436725127492355,0.134864346384821,0.495920734352016,0,0.259229946583586,0,0,0.747582730219894,0.165458490457098,0.194451188344048,0.516639293910924,0.506868376472335,0.938857909166032,0.13020438484395,0.104859344425711,0,0,0,0.202725215290164,0.205421914329655,0.129920822977795,0,0.198681354781265,0.120195449519969,0,0,0.0762068066549998,0,0,0,0,0.226730383615211,0.221985953374065,0.179427713218951,0.335769232728157,0.19318959403219,0,0.183151624267265,0,1.00314420807073,0,0,0,0,0,0,0,0,0.453142408984205,0,0.31136204275253,0.798049746802062,0.170733605754134,0.243106717068294,0,0.183843508450014,0.44449345560323,0.206035057238894,0,0.252697211763798,0.50695859978048,0.754505365544305,0.468207537349412,0.192075457214608,0.229741875822453,0,0.347652977834566,0.77163688185482,0,0.441596760403192,0.342869252385415,0,0,0.726732083161643,0.282328141245992,0.338458431566706,0,0,0.543216455383447,0,0.118635018124174,0.0985044823755635,0.409231043169689,0.309873682371932,0.385813221962283,0.499621155875892,0,1.28922632428979,0.765153328275374,0.220591419119515,0.463735671240843 | ||
|short_description=p8@Smad6 | |||
}} | }} |
Latest revision as of 23:46, 26 September 2015
Short description: | p8@Smad6 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_8_at_Smad6_5end |
Coexpression cluster: | MCL_coexpression_mm9:1855 |
Association with transcript: | 152bp_to_ENSMUST00000041029, NM_008542, uc009qbk.2_5end |
EntrezGene: | Smad6 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 2.92e-09 | 7 |
cardiocyte | 1.56e-08 | 3 |
striated muscle cell | 1.56e-08 | 3 |
cardiac muscle cell | 1.56e-08 | 3 |
cardiac muscle myoblast | 1.56e-08 | 3 |
muscle precursor cell | 4.31e-07 | 6 |
muscle cell | 4.31e-07 | 6 |
myoblast | 4.31e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
lung | 4.35e-17 | 14 |
respiratory tube | 4.35e-17 | 14 |
respiration organ | 4.35e-17 | 14 |
pair of lungs | 4.35e-17 | 14 |
lung primordium | 4.35e-17 | 14 |
lung bud | 4.35e-17 | 14 |
epithelial bud | 1.06e-13 | 17 |
thoracic cavity element | 1.06e-13 | 17 |
thoracic segment organ | 1.06e-13 | 17 |
thoracic cavity | 1.06e-13 | 17 |
thoracic segment of trunk | 1.06e-13 | 17 |
respiratory primordium | 1.06e-13 | 17 |
endoderm of foregut | 1.06e-13 | 17 |
epithelial fold | 2.46e-11 | 20 |
cardiovascular system | 4.66e-11 | 23 |
circulatory system | 4.66e-11 | 23 |
primary circulatory organ | 1.17e-09 | 18 |
heart | 1.17e-09 | 18 |
primitive heart tube | 1.17e-09 | 18 |
primary heart field | 1.17e-09 | 18 |
anterior lateral plate mesoderm | 1.17e-09 | 18 |
heart tube | 1.17e-09 | 18 |
heart primordium | 1.17e-09 | 18 |
cardiac mesoderm | 1.17e-09 | 18 |
cardiogenic plate | 1.17e-09 | 18 |
heart rudiment | 1.17e-09 | 18 |
primordium | 7.04e-09 | 134 |
tube | 1.96e-08 | 114 |
anatomical conduit | 2.59e-08 | 122 |
trunk | 1.34e-07 | 90 |
splanchnic layer of lateral plate mesoderm | 4.92e-07 | 33 |
respiratory tract | 7.45e-07 | 41 |