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FFCP PHASE1:Mm9::chr11:116442789..116442827,-: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=217342
|EntrezGene=217342
|HGNC=
|HGNC=
|MCL_coexpression_id=1
|TSSclassifier=NA
|UniProt=Q6ZPJ3
|UniProt=Q6ZPJ3
|association_with_transcript=-28bp_to_ENSMUST00000082152,NM_173755,uc007mln.1_5end
|association_with_transcript=-28bp_to_ENSMUST00000082152,NM_173755,uc007mln.1_5end
|cluster_id=chr11:116442789..116442827,-
|description=CAGE_peak_2_at_Ube2o_5end
|description=CAGE_peak_2_at_Ube2o_5end
|id=chr11:116442789..116442827,-
|id=chr11:116442789..116442827,-
|ontology_enrichment_celltype=CL:0000540!4.97e-13!33;CL:0000047!4.97e-13!33;CL:0000031!4.97e-13!33;CL:0000404!4.97e-13!33;CL:0000117!1.72e-12!23;CL:0000337!1.72e-12!23;CL:0000393!7.73e-12!39;CL:0000211!7.73e-12!39;CL:0002319!6.01e-11!43;CL:0000221!8.20e-11!44;CL:0000133!8.20e-11!44;CL:0000055!1.24e-09!50
|ontology_enrichment_celltype_v019_2=CL:0000540,4.96e-13,33;CL:0000047,4.96e-13,33;CL:0000031,4.96e-13,33;CL:0000404,4.96e-13,33;CL:0000117,1.72e-12,23;CL:0000337,1.72e-12,23;CL:0000393,7.72e-12,39;CL:0000211,7.72e-12,39;CL:0002319,6.00e-11,43;CL:0000221,8.19e-11,44;CL:0000133,8.19e-11,44
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001017!3.29e-27!73;UBERON:0005743!3.29e-27!73;UBERON:0000073!1.38e-25!75;UBERON:0001016!1.38e-25!75;UBERON:0001049!6.70e-22!52;UBERON:0005068!6.70e-22!52;UBERON:0006241!6.70e-22!52;UBERON:0007135!6.70e-22!52;UBERON:0000955!2.88e-21!50;UBERON:0006238!2.88e-21!50;UBERON:0002346!8.37e-21!71;UBERON:0003075!8.37e-21!71;UBERON:0007284!8.37e-21!71;UBERON:0002616!1.43e-20!49;UBERON:0004121!2.34e-20!102;UBERON:0000924!2.34e-20!102;UBERON:0006601!2.34e-20!102;UBERON:0000033!1.28e-19!63;UBERON:0002020!3.47e-17!34;UBERON:0003056!2.22e-16!49;UBERON:0003080!2.76e-16!40;UBERON:0002780!1.29e-15!39;UBERON:0001890!1.29e-15!39;UBERON:0006240!1.29e-15!39;UBERON:0002791!1.43e-14!29;UBERON:0003528!1.43e-14!29;UBERON:0001893!1.43e-14!29;UBERON:0000025!1.44e-12!114;UBERON:0004111!9.70e-12!122;UBERON:0000153!2.21e-11!94;UBERON:0007811!2.53e-11!86;UBERON:0000956!2.61e-10!21;UBERON:0001869!2.61e-10!21;UBERON:0000203!2.61e-10!21;UBERON:0002619!1.99e-08!17;UBERON:0000477!1.15e-07!154;UBERON:0000468!1.58e-07!333;UBERON:0000475!2.99e-07!200;UBERON:0002021!3.05e-07!10;UBERON:0000411!3.05e-07!10;UBERON:0001950!3.05e-07!10
|ontology_enrichment_uberon_v019_2=UBERON:0001017,3.28e-27,73;UBERON:0001016,1.37e-25,75;UBERON:0000073,2.20e-23,54;UBERON:0002346,1.55e-22,64;UBERON:0003075,1.55e-22,64;UBERON:0007284,1.55e-22,64;UBERON:0001049,6.68e-22,52;UBERON:0005068,6.68e-22,52;UBERON:0006241,6.68e-22,52;UBERON:0007135,6.68e-22,52;UBERON:0004121,2.42e-21,95;UBERON:0000924,2.42e-21,95;UBERON:0006601,2.42e-21,95;UBERON:0000955,3.16e-19,47;UBERON:0006238,3.16e-19,47;UBERON:0002616,1.51e-18,46;UBERON:0010371,2.32e-18,73;UBERON:0010314,1.55e-17,92;UBERON:0002020,3.46e-17,34;UBERON:0003056,2.21e-16,49;UBERON:0003080,2.76e-16,40;UBERON:0002780,1.28e-15,39;UBERON:0001890,1.28e-15,39;UBERON:0006240,1.28e-15,39;UBERON:0003528,1.43e-14,29;UBERON:0002791,1.43e-14,29;UBERON:0001893,1.43e-14,29;UBERON:0000025,1.43e-12,114;UBERON:0004111,9.68e-12,122;UBERON:0000956,2.60e-10,21;UBERON:0001869,2.60e-10,21;UBERON:0000203,2.60e-10,21;UBERON:0002619,1.99e-08,17;UBERON:0000922,2.77e-07,320;UBERON:0002021,3.05e-07,10;UBERON:0000411,3.05e-07,10;UBERON:0001950,3.05e-07,10
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159,5.53778153359751,4.71160695571253,4.27729411862916,4.34937519160848,11.837551712368,7.32631075615496,3.97100377097034,13.2226808073952,10.4619457016962,8.44780627453891,8.09764946655702,12.7600297147071,13.3171367420653,10.8712854371703,16.7057403629562,1.58005560314089,6.08175645870493,5.6491026440655,4.28738715826724,3.22248052201467,4.96703386953162,5.28859977887863,4.43068581523732,3.63479219813331,3.88654713940499,3.7305688500631,3.50848370663109,3.84847366561318,2.92192255453922,3.85441652145859,15.3170307828105,10.4068073666992,10.5767308309369,4.82973985080476,5.2551093126331,5.86085197655248,6.85978813053011,5.517293144389,17.5073071211291,13.8097570952153,14.3223878359849,15.1230800462445,17.8121455140367,18.8848474347425,19.5756525067224,20.7147753483141,17.2194115413998,21.2281727818246,5.91587881229807,5.98537310101547,7.5122786531819,7.29320151204882,7.33646069197938,6.98605332110054,5.11167473943715,6.18105171716683,5.77654577265267,4.54854981174835,4.56262739802432,4.90428487603798,5.61849044819294,5.50616310681876,5.39893408182765,4.76293691283074,8.45955579397445,4.82273051159263,4.94503080963968,3.97437084362873,5.48590803816665,4.08194354166476,6.43777712857767,5.81385666529314,4.6113596403512,4.73841804193388,4.024415403201,4.47218509444333,5.16055632614275,5.61142271657738,6.99946606932627,9.85044823755635,4.09231043169689,4.64810523557898,8.10207766120794,11.2414760072076,8.18760629558929,5.37177635120746,4.97349663378993,7.94129108830256,2.55054619182464
|phase1_expression=5.12476310735341,2.44282785347553,1.81999695755814,2.72217790176147,0.500895729946347,1.6787927191189,2.56973904655078,3.61545305636414,3.66050677594334,3.97909694747389,5.99262888789267,7.73789942254763,3.0816131387617,3.4968160967599,10.9926221399169,9.31386229993199,8.39474253753776,3.3123527362615,2.60517423850904,3.39511721438424,8.75945888556019,4.17021995043718,4.4403964153619,1.43993180514066,2.2940928106717,0.57423196411502,1.29228598847722,1.50829862880122,0.570070258369122,0.504060259519861,1.55211357458713,8.25539875497521,8.61090702618398,0,2.02196133825892,1.82858109894342,1.63335485009895,0.837063261473815,0,0.523523743973798,0,0,0.485510353031154,6.42073771675444,6.38674666682942,3.85448179539531,10.9534788208725,5.01457859675027,6.37089929929968,5.24960727500565,4.89952475688769,4.31257693094915,1.67782606057736,2.90144856804538,2.35265659399725,5.91696702882678,5.44413535883638,6.70373719960675,11.7343547298567,11.6378015439847,15.2119536841483,8.13226876965917,7.11435836888911,1.7997994345628,5.93319817540185,4.2628806896766,9.28760342607055,9.98967593836042,11.6132365785495,12.9605700798423,12.1988477583802,16.5677570954206,11.2642955885323,12.0040983230655,8.81778333367775,16.5459381589804,17.6185409599022,22.6006588410782,18.279177457493,16.2220133908138,16.1018252740241,10.4182674111352,18.4260779340911,13.5063026407603,20.0165704587621,14.4368006882097,14.8066548031067,16.7759501242771,4.24066682665831,2.41828992341714,1.15945795480671,2.58127163094416,4.0798280022465,3.2382191498269,2.59910566979068,5.82434953226536,3.37066608316204,3.91989741929533,2.59786004602869,2.47337702157238,5.63373679106722,1.28326477414318,5.09610479413291,14.2213340630666,2.81438353314578,1.26679932737549,2.02209778005913,4.22480354960522,0.776813650941515,6.82833839698194,5.55153045651635,3.34912026143355,6.6878494204257,2.86373017049983,5.76184664964954,7.03732911446183,4.6967043869531,3.7595832799177,4.42305275974937,7.44127509758082,9.05450225687614,5.33362778448744,0,11.7112318804619,13.1951425292477,1.53274233125155,1.43778149407104,0.599902730993408,1.27070227073065,20.2217363196511,14.640019290196,17.0889918873496,20.3374454624963,18.6672283851141,15.3763152974074,18.1710214635889,6.21220119486929,5.349499736234,3.28539585963777,3.78795340595653,6.76626303406059,6.43725892413724,6.66229880279792,7.08312643827861,8.16437989815934,8.07116437794554,9.65127762965207,7.76110112217047,9.91612767491074,7.75334928688059,8.44565395986955,6.1374805079721,5.83899223373756,7.3132954969655,4.52720700097476,8.55847347319521,0.702213187313235,0.51469581422943,1.42081749697796,6.62802472113606,4.22146907965973,5.76198596675248,7.10234206755631,3.54175617145327,6.63348585415727,4.41814495025775,4.56064782379353,3.50296027101508,5.10135534731789,5.74586124276833,7.53939928776458,7.30999937126662,6.80605357402257,5.36825675041487,11.565947171027,12.657267322652,2.31293148088659,1.85115396664481,6.82522401712749,5.10920678092965,4.89696353023955,3.22693639397348,2.89091456998331,4.37518940058886,3.79623249235609,3.45867804920423,3.2673577144035,3.58121649674071,1.9496408711912,2.69645822596266,2.59365659849633,2.19055400579804,5.50036912763937,5.48392860526698,1.1270773567308,5.7022371796688,6.0125271021964,6.17195215034803,4.36332106157375,2.65698266363284,2.04098346193787,2.83813477020141,2.66807364378434,6.84064933435986,11.596980711679,8.54476027062444,8.92584534109413,12.3000351473733,10.4396599230382,9.20627639842594,5.35046248357617,3.84385978463314,24.4405951096503,4.09355042435354,3.12037673114561,3.03094653536534,1.97337154874103,4.82443521363367,4.43407656399851,6.63219941196697,6.35563408123901,4.92260748748046,4.22442446919304,4.69017520837084,4.76087281772027,7.80534591431195,5.2019597555043,8.41565820665345,6.85655505227195,6.55453258862952,7.9435091658312,6.36455857758651,0,2.17562273527484,2.95058563811422,3.31124095565679,21.0321272884007,22.1530087659264,2.62295912602681,5.30188947129183,8.83423014365519,5.46614242015294,10.9865932843727,7.40803273652911,8.24355094104858,9.6246020468203,8.09621403349789,6.42962887404886,9.09161889277004,19.6006003017302,6.24536374916382,6.05423052468668,7.4928001302645,5.27904393512113,3.98235415019888,5.82673526771955,5.74414758233027,4.14931175462976,7.08724542913855,4.30409207121498,5.16856586336442,6.18007340111759,5.34746067577082,4.42451461110142,2.10837217149998,3.09406629744561,6.46835250932197,6.12207719706455,6.07985813778946,8.3591443662321,7.27094957933322,8.56170324489939,4.93647061806363,10.9607381681256,10.7948985709307,14.8282449604674,5.07215315526412,3.95727007059552,3.55221738730992,4.88534691918062,5.13301079213487,5.41664969158702,3.78925087618806,16.1320012749143,9.22702756308404,4.95328483111734,5.55583582109135,10.360265135258,9.15851325730869,15.0993594316305,1.18984900995699,2.37917468950219,2.3493995546752,4.77335309007557,6.64305586520384,5.48962561242491,4.21220829205025,2.71814784818809,3.05707589244649,2.56242258131159,5.53778153359751,4.71160695571253,4.27729411862916,4.34937519160848,11.837551712368,7.32631075615496,3.97100377097034,13.2226808073952,10.4619457016962,8.44780627453891,8.09764946655702,12.7600297147071,13.3171367420653,10.8712854371703,16.7057403629562,1.58005560314089,6.08175645870493,5.6491026440655,4.28738715826724,3.22248052201467,4.96703386953162,5.28859977887863,4.43068581523732,3.63479219813331,3.88654713940499,3.7305688500631,3.50848370663109,3.84847366561318,2.92192255453922,3.85441652145859,15.3170307828105,10.4068073666992,10.5767308309369,4.82973985080476,5.2551093126331,5.86085197655248,6.85978813053011,5.517293144389,17.5073071211291,13.8097570952153,14.3223878359849,15.1230800462445,17.8121455140367,18.8848474347425,19.5756525067224,20.7147753483141,17.2194115413998,21.2281727818246,5.91587881229807,5.98537310101547,7.5122786531819,7.29320151204882,7.33646069197938,6.98605332110054,5.11167473943715,6.18105171716683,5.77654577265267,4.54854981174835,4.56262739802432,4.90428487603798,5.61849044819294,5.50616310681876,5.39893408182765,4.76293691283074,8.45955579397445,4.82273051159263,4.94503080963968,3.97437084362873,5.48590803816665,4.08194354166476,6.43777712857767,5.81385666529314,4.6113596403512,4.73841804193388,4.024415403201,4.47218509444333,5.16055632614275,5.61142271657738,6.99946606932627,9.85044823755635,4.09231043169689,4.64810523557898,8.10207766120794,11.2414760072076,8.18760629558929,5.37177635120746,4.97349663378993,7.94129108830256,2.55054619182464
|short_description=p2@Ube2o
|short_description=p2@Ube2o
}}
}}

Latest revision as of 00:24, 27 September 2015

Short description:p2@Ube2o
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Ube2o_5end
Coexpression cluster:MCL_coexpression_mm9:1
Association with transcript: -28bp_to_ENSMUST00000082152, NM_173755, uc007mln.1_5end
EntrezGene:Ube2o
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Ube2o

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G75.12
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I52.44
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I61.82
CD326+ enterocyte, pool1.CNhs13542.11848-124I32.72
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I71.68
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I82.57
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E93.62
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E73.66
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F23.98
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E65.99
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F17.74
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E43.08
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E83.50
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A110.99
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A39.31
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A58.39
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A23.31
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A42.61
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A63.40
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A38.76
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H24.17
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I94.44
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D11.44
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D22.29
GP2+ M cell, pool1.CNhs13228.11845-124H90.57
GP2+ M cell, pool2.CNhs13231.11846-124I11.29
GP2+ M cell, pool3.CNhs13240.11847-124I21.51
Ileum epithelium, pool1.CNhs13199.10252-104B90.57
Ileum epithelium, pool2.CNhs13232.10253-104C10.50
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C81.55
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I38.26
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G68.61
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F52.02
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F61.83
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F71.63
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.84
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.52
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.49
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D86.42
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D96.39
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B33.85
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B710.95
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C25.01
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B86.37
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C35.25
Mouse Astrocytes, donor2.CNhs12078.11552-120C44.90
Mouse Astrocytes, donor3.CNhs12107.11633-122C44.31
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A21.68
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I92.90
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A12.35
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C15.92
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E15.44
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C56.70
Mouse Granule cells, donor1.CNhs12131.11713-123C311.73
Mouse Granule cells, donor2.CNhs12357.11731-123E311.64
Mouse Granule cells, donor3.CNhs12108.11636-122C715.21
Mouse Meningeal cells, donor1.CNhs12132.11716-123C68.13
Mouse Meningeal cells, donor3.CNhs12109.11639-122D17.11
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C71.80
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E75.93
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D24.26
Mouse Microglia, donor1.CNhs12629.11718-123C89.29
Mouse Microglia, donor2.CNhs12634.11736-123E89.99
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D511.61
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F512.96
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D912.20
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F116.57
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D511.26
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D212.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F28.82
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D616.55
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D317.62
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F322.60
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D718.28
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D416.22
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F416.10
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D810.42
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E418.43
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E513.51
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I620.02
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D614.44
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F614.81
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E116.78
Mouse Schwann, donor1.CNhs12507.11728-123D94.24
Mouse Schwann, donor2.CNhs12573.11746-123F92.42
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G31.16
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F72.58
Mouse hepatocyte, donor1.CNhs13078.11714-123C44.08
Mouse hepatocyte, donor3.CNhs12615.11637-122C83.24
Mouse hepatocyte, donor6.CNhs13090.11822-124F42.60
Mouse hepatocyte, donor8.CNhs13091.11824-124F65.82
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A73.37
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I73.92
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E32.60
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I82.47
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G65.63
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H11.28
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I85.10
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B614.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G12.81
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G21.27
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G32.02
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B64.22
accessory axillary lymph node, adult.CNhs10475.1063-29H90.78
adrenal gland, adult.CNhs10508.49-24D76.83
adrenal gland, embryo E14.CNhs11038.406-44C55.55
adrenal gland, embryo E16.CNhs11004.1254-43D63.35
adrenal gland, embryo E17.CNhs11043.1263-45I16.69
adrenal gland, embryo E18.CNhs11026.1262-18F52.86
adrenal gland, neonate N00.CNhs11191.1311-23C15.76
adrenal gland, neonate N25.CNhs11223.1377-27I37.04
amnion, adult pregnant day17.5.CNhs10488.583-22A84.70
aorta, adult.CNhs10498.46-23H13.76
bone (os femoris), adult.CNhs10483.56-12G24.42
bone (os femoris), neonate N02.CNhs11227.1985-43F57.44
bone (os femoris), neonate N16.CNhs11225.1525-43A69.05
bone (os femoris), neonate N20.CNhs11195.1350-25C35.33
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B211.71
cerebellum, neonate N30.CNhs11135.1395-42I213.20
colon, adult.CNhs10468.36-18H71.53
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C71.44
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.60
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D41.27
corpora quadrigemina, adult.CNhs10501.16-22A420.22
corpus striatum, adult.CNhs10487.19-21D814.64
corpus striatum, neonate N00.CNhs11226.630-43F117.09
cortex, adult.CNhs10473.12-14D520.34
cortex, neonate N30.CNhs11107.1392-42F218.67
diencephalon, adult.CNhs10482.20-12F215.38
diencephalon, neonate N30.CNhs11201.1388-42B218.17
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B16.21
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A25.35
epididymis, adult.CNhs10490.58-23B23.29
eyeball, adult.CNhs10484.31-12G43.79
eyeball, embryo E12.CNhs11016.345-16C66.77
eyeball, embryo E14.CNhs10521.399-16E26.44
eyeball, embryo E15.CNhs10593.426-16C96.66
eyeball, embryo E17.CNhs11023.1261-18D47.08
eyeball, neonate N00.CNhs11207.633-15C68.16
eyeball, neonate N01.CNhs11140.1532-43E78.07
eyeball, neonate N02.CNhs11205.1551-44G89.65
eyeball, neonate N16.CNhs11188.777-19A27.76
forelimb, embryo E11.CNhs10596.335-25E29.92
forelimb, embryo E12.CNhs10600.359-14H27.75
forelimb, embryo E13.CNhs10589.384-1E28.45
forelimb, embryo E14.CNhs10577.413-26A86.14
forelimb, embryo E15.CNhs11007.437-20E75.84
forelimb, embryo E17.CNhs10598.1517-43C47.31
forelimb, embryo E18.CNhs11008.1520-43B54.53
gonad, embryo E13.CNhs11044.1564-45I68.56
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.70
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.51
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D51.42
heart, embryo E11.CNhs10586.331-24E96.63
heart, embryo E12.CNhs11015.353-12F54.22
heart, embryo E13.CNhs11013.376-3I95.76
heart, embryo E14.CNhs10597.403-26D47.10
heart, embryo E15.CNhs11017.431-16C83.54
heart, embryo E16.CNhs11021.457-17C66.63
heart, embryo E17.CNhs11025.479-18E54.42
heart, embryo E18.CNhs11030.1283-20G34.56
heart, neonate N00.CNhs11213.639-21E33.50
heart, neonate N03.CNhs11221.1349-25I25.10
heart, neonate N10.CNhs11118.749-24G15.75
heart, neonate N16.CNhs11209.782-15G17.54
heart, neonate N20.CNhs11127.821-26I67.31
heart, neonate N25.CNhs11196.1351-25D36.81
heart, neonate N30.CNhs11202.1390-42D25.37
hippocampus, adult.CNhs10478.13-16E811.57
hippocampus, neonate N00.CNhs11228.627-43G112.66
intestinal mucosa, adult.CNhs10506.860-29I32.31
intestine, adult.CNhs10496.178-9A31.85
intestine, embryo E12.CNhs11019.1251-16I56.83
intestine, embryo E13.CNhs11010.381-16D55.11
intestine, embryo E15.CNhs10602.976-16D84.90
intestine, embryo E16.CNhs10585.463-22H43.23
intestine, embryo E17.CNhs10582.482-18D32.89
intestine, embryo E18.CNhs10526.1289-20F74.38
intestine, neonate N00.CNhs11126.644-26D13.80
intestine, neonate N01.CNhs11192.1322-23E93.46
intestine, neonate N06.CNhs11102.688-20B83.27
intestine, neonate N07.CNhs11095.720-20F23.58
intestine, neonate N10.CNhs11098.755-23A51.95
intestine, neonate N20.CNhs11187.827-18D12.70
intestine, neonate N25.CNhs11121.1352-25E32.59
intestine, neonate N30.CNhs11131.1384-42G12.19
kidney, embryo E14.CNhs10606.411-4I95.50
kidney, embryo E15.CNhs10997.434-16F85.48
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I25.70
kidney, embryo E18.CNhs11001.1288-20C76.01
kidney, neonate N00.CNhs11214.646-21G76.17
kidney, neonate N10.CNhs11206.758-6D54.36
kidney, neonate N20.CNhs11113.832-19I12.66
kidney, neonate N25.CNhs11122.1353-25F32.04
kidney, neonate N30.CNhs11203.1385-42H12.84
liver, adult pregnant day01.CNhs10466.508-5B22.67
liver, embryo E12.CNhs10601.355-15F86.84
liver, embryo E13.CNhs10524.378-3H611.60
liver, embryo E14.CNhs10594.409-16E18.54
liver, embryo E15.CNhs10520.433-16D78.93
liver, embryo E16.CNhs10523.462-17F512.30
liver, embryo E17.CNhs10510.481-18A310.44
liver, embryo E18.CNhs10579.499-43G49.21
liver, neonate N00.CNhs11117.641-24F45.35
liver, neonate N03.CNhs11123.1345-25G23.84
liver, neonate N06.CNhs11101.684-20A824.44
liver, neonate N07.CNhs11103.716-20H24.09
liver, neonate N10.CNhs11115.751-24B93.12
liver, neonate N20.CNhs11220.823-25A33.03
liver, neonate N25.CNhs11198.1368-26H11.97
liver, neonate N30.CNhs11106.1382-42D14.82
lung, adult.CNhs10474.28-22B14.43
lung, embryo E12.CNhs10522.354-16G26.63
lung, embryo E14.CNhs10604.404-26F86.36
lung, embryo E15.CNhs11020.432-17C54.92
lung, embryo E16.CNhs10998.458-17B64.22
lung, embryo E17.CNhs10605.480-44A64.69
lung, embryo E18.CNhs10583.1287-20I64.76
lung, neonate N00.CNhs11224.640-42C67.81
lung, neonate N06.CNhs11212.683-20E55.20
lung, neonate N07.CNhs11111.715-19A38.42
lung, neonate N10.CNhs11219.750-23E66.86
lung, neonate N20.CNhs11109.822-18A46.55
lung, neonate N25.CNhs11119.1359-25C77.94
lung, neonate N30.CNhs11133.1394-42H26.36
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A12.18
mammary gland, adult lactating day02.CNhs10480.595-22B62.95
mammary gland, adult pregnant day19.CNhs10476.588-5H23.31
medulla oblongata, adult.CNhs10477.17-12C221.03
medulla oblongata, neonate N30.CNhs11200.1396-42A322.15
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C72.62
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C25.30
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E18.83
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E25.47
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E310.99
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D77.41
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D88.24
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D99.62
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D48.10
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D56.43
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D69.09
olfactory brain, adult.CNhs10489.18-22I919.60
ovary, adult.CNhs10507.91-2I76.25
ovary, embryo E18.CNhs11040.505-44H76.05
ovary, neonate N00.CNhs11217.1299-22I47.49
oviduct, adult pregnant day01.CNhs10500.988-6G65.28
pancreas, adult.CNhs10486.34-16E43.98
pancreas, embryo E14.CNhs11012.405-44F45.83
pancreas, embryo E15.CNhs11042.1556-45F25.74
pancreas, embryo E16.CNhs11003.460-26E54.15
pancreas, embryo E17.CNhs10599.1558-45G37.09
pancreas, embryo E18.CNhs10580.1535-43I74.30
pancreas, neonate N00.CNhs11105.645-26G95.17
pancreas, neonate N01.CNhs11138.1531-43D76.18
pancreas, neonate N02.CNhs11139.1539-43D85.35
pancreas, neonate N16.CNhs11136.787-43B64.42
pancreas, neonate N25.CNhs11094.1555-45E22.11
pancreas, neonate N30.CNhs11182.1548-44H53.09
pituitary gland, adult.CNhs10493.21-1G86.47
pituitary gland, embryo E12.CNhs11018.346-16E66.12
pituitary gland, embryo E13.CNhs11009.370-44C76.08
pituitary gland, embryo E14.CNhs11037.398-44A58.36
pituitary gland, embryo E15.CNhs10592.427-16B97.27
pituitary gland, embryo E16.CNhs11036.449-43F68.56
pituitary gland, embryo E17.CNhs11039.1265-44F54.94
pituitary gland, neonate N00.CNhs11190.1308-22E910.96
placenta, adult pregnant day10.CNhs10472.539-13I710.79
placenta, adult pregnant day17.CNhs10464.577-18G314.83
prostate, adult.CNhs10470.859-1F85.07
skin, adult.CNhs10492.30-1C33.96
skin, neonate N00.CNhs11124.650-25G43.55
skin, neonate N03.CNhs11215.662-22H34.89
skin, neonate N06.CNhs11097.693-20I55.13
skin, neonate N10.CNhs11108.762-6C45.42
small intestine, neonate N16.CNhs11114.790-21I13.79
spinal cord, adult.CNhs10505.24-13C916.13
spleen, adult.CNhs10465.25-2G29.23
spleen, embryo E16.CNhs11035.461-43C14.95
spleen, embryo E18.CNhs11011.1271-21F25.56
spleen, neonate N10.CNhs11116.752-24D110.36
spleen, neonate N20.CNhs11112.824-19H19.16
spleen, neonate N25.CNhs11099.1354-25G315.10
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C61.19
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C92.38
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D32.35
stomach, adult.CNhs10503.33-1H64.77
stomach, embryo E12.CNhs10588.356-43E36.64
stomach, embryo E15.CNhs10603.1252-16G85.49
stomach, embryo E16.CNhs11022.459-17D44.21
stomach, embryo E17.CNhs11006.1035-18D52.72
stomach, embryo E18.CNhs10999.1286-20C63.06
stomach, neonate N03.CNhs11193.1340-24B82.56
stomach, neonate N07.CNhs11210.718-18A95.54
stomach, neonate N25.CNhs11104.1355-25E44.71
stomach, neonate N30.CNhs11134.1386-42I14.28
submandibular gland, adult.CNhs10469.59-29C14.35
testis, adult.CNhs10504.57-7G511.84
testis, embryo E13.CNhs11031.389-23F57.33
testis, embryo E15.CNhs11034.443-27C53.97
testis, embryo E16.CNhs11033.470-26G513.22
testis, embryo E17.CNhs11029.486-18I510.46
testis, embryo E18.CNhs11027.503-18G58.45
testis, neonate N00.CNhs11189.1300-22B78.10
testis, neonate N07.CNhs11222.726-26I412.76
testis, neonate N10.CNhs11204.763-44D913.32
testis, neonate N20.CNhs11110.839-18H310.87
testis, neonate N30.CNhs11130.1391-42E216.71
thymus, adult.CNhs10471.38-12B51.58
thymus, embryo E14.CNhs11041.402-44I46.08
thymus, embryo E15.CNhs11005.430-45I25.65
thymus, embryo E16.CNhs11002.456-26C54.29
thymus, embryo E17.CNhs10581.478-18C13.22
thymus, embryo E18.CNhs10595.1273-19G44.97
thymus, neonate N02.CNhs11181.1541-43F85.29
thymus, neonate N03.CNhs11137.2104-43C74.43
thymus, neonate N06.CNhs11197.681-26C43.63
thymus, neonate N07.CNhs11211.713-19D33.89
thymus, neonate N10.CNhs11194.748-24E43.73
thymus, neonate N20.CNhs11186.820-7A23.51
thymus, neonate N25.CNhs11125.1362-25G73.85
thymus, neonate N30.CNhs11132.1393-42G22.92
tongue, adult.CNhs10499.32-1B43.85
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H315.32
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F710.41
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G510.58
urinary bladder, adult.CNhs10481.879-12E44.83
uterus, adult pregnant day19.CNhs10497.590-15F55.26
uterus, adult.CNhs10509.92-27E55.86
vagina, adult.CNhs10502.89-27D56.86
vesicular gland, adult.CNhs10491.51-27F85.52
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A117.51
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A213.81
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A314.32
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D715.12
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A417.81
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A518.88
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A619.58
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A720.71
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A817.22
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A921.23
whole body, embryo E11.CNhs11014.324-5I85.92
whole body, embryo E12.CNhs10587.857-27C95.99
whole body, embryo E13.CNhs10512.372-23H27.51
whole body, embryo E14.5.CNhs10578.420-27D27.29
whole body, embryo E14.CNhs10519.395-14B17.34
whole body, embryo E16.CNhs10514.453-14F26.99
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G55.11
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G56.18
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G55.78
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G54.55
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G54.56
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G54.90
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G55.62
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G55.51
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G55.40
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G54.76
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G58.46
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G54.82
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G54.95
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G53.97
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G55.49
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G54.08
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G56.44
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G55.81
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G54.61
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G54.74
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G54.02
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G54.47
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G55.16
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G55.61
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G57.00
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G59.85
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G54.09
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G54.65
whole body, embryo E17.5.CNhs10513.490-9F98.10
whole body, embryo E17.CNhs10517.475-3I511.24
whole body, embryo E18.CNhs10516.493-3B38.19
whole body, neonate N00.CNhs10525.657-19C25.37
whole body, neonate N01.CNhs10576.659-23C64.97
whole body, neonate N06.CNhs10515.692-21D17.94
whole body, neonate N10.CNhs10518.761-6B42.55





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
neuron4.96e-1333
neuronal stem cell4.96e-1333
neuroblast4.96e-1333
electrically signaling cell4.96e-1333
CNS neuron (sensu Vertebrata)1.72e-1223
neuroblast (sensu Vertebrata)1.72e-1223
electrically responsive cell7.72e-1239
electrically active cell7.72e-1239
neural cell6.00e-1143
ectodermal cell8.19e-1144
neurectodermal cell8.19e-1144

Uber anatomy
Ontology termp-valuen
central nervous system3.28e-2773
nervous system1.37e-2575
regional part of nervous system2.20e-2354
neurectoderm1.55e-2264
neural plate1.55e-2264
presumptive neural plate1.55e-2264
neural tube6.68e-2252
neural rod6.68e-2252
future spinal cord6.68e-2252
neural keel6.68e-2252
ectoderm-derived structure2.42e-2195
ectoderm2.42e-2195
presumptive ectoderm2.42e-2195
brain3.16e-1947
future brain3.16e-1947
regional part of brain1.51e-1846
ecto-epithelium2.32e-1873
structure with developmental contribution from neural crest1.55e-1792
gray matter3.46e-1734
pre-chordal neural plate2.21e-1649
anterior neural tube2.76e-1640
regional part of forebrain1.28e-1539
forebrain1.28e-1539
future forebrain1.28e-1539
brain grey matter1.43e-1429
regional part of telencephalon1.43e-1429
telencephalon1.43e-1429
tube1.43e-12114
anatomical conduit9.68e-12122
cerebral cortex2.60e-1021
cerebral hemisphere2.60e-1021
pallium2.60e-1021
regional part of cerebral cortex1.99e-0817
embryo2.77e-07320
occipital lobe3.05e-0710
visual cortex3.05e-0710
neocortex3.05e-0710
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