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FFCP PHASE1:Mm9::chr4:45197687..45197723,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=666060
|EntrezGene=666060
|HGNC=
|HGNC=
|TSSclassifier=NA
|UniProt=A2AKB3
|UniProt=A2AKB3
|association_with_transcript=-23bp_to_ENSMUST00000134280_5end
|association_with_transcript=-23bp_to_ENSMUST00000134280_5end
|cluster_id=chr4:45197687..45197723,+
|description=CAGE_peak_2_at_Frmpd1_5end
|description=CAGE_peak_2_at_Frmpd1_5end
|id=chr4:45197687..45197723,+
|id=chr4:45197687..45197723,+
|ontology_enrichment_celltype=CL:0000221!4.99e-12!44;CL:0000133!4.99e-12!44;CL:0002319!1.09e-11!43;CL:0000540!7.39e-10!33;CL:0000047!7.39e-10!33;CL:0000031!7.39e-10!33;CL:0000404!7.39e-10!33;CL:0000055!1.26e-07!50
|ontology_enrichment_celltype_v019_2=CL:0000221,1.38e-14,44;CL:0000133,1.38e-14,44;CL:0002319,4.96e-14,43;CL:0000540,1.95e-11,33;CL:0000047,1.95e-11,33;CL:0000031,1.95e-11,33;CL:0000404,1.95e-11,33;CL:0000393,1.05e-08,39;CL:0000211,1.05e-08,39;CL:0000107,1.34e-07,9
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0004121!3.48e-29!102;UBERON:0000924!3.48e-29!102;UBERON:0006601!3.48e-29!102;UBERON:0001017!8.24e-24!73;UBERON:0005743!8.24e-24!73;UBERON:0000073!2.06e-23!75;UBERON:0001016!2.06e-23!75;UBERON:0002346!1.24e-21!71;UBERON:0003075!1.24e-21!71;UBERON:0007284!1.24e-21!71;UBERON:0000033!1.18e-17!63;UBERON:0001049!9.59e-16!52;UBERON:0005068!9.59e-16!52;UBERON:0006241!9.59e-16!52;UBERON:0007135!9.59e-16!52;UBERON:0000955!1.09e-14!50;UBERON:0006238!1.09e-14!50;UBERON:0002616!3.67e-14!49;UBERON:0003056!1.12e-13!49;UBERON:0003080!6.86e-11!40;UBERON:0002780!2.05e-10!39;UBERON:0001890!2.05e-10!39;UBERON:0006240!2.05e-10!39;UBERON:0002020!5.48e-10!34;UBERON:0000468!1.45e-08!333;UBERON:0000153!1.80e-08!94;UBERON:0007811!3.79e-08!86;UBERON:0002791!2.45e-07!29;UBERON:0003528!2.45e-07!29;UBERON:0001893!2.45e-07!29
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.56e-29,73;UBERON:0001016,2.52e-28,75;UBERON:0004121,2.61e-27,95;UBERON:0000924,2.61e-27,95;UBERON:0006601,2.61e-27,95;UBERON:0002346,6.61e-23,64;UBERON:0003075,6.61e-23,64;UBERON:0007284,6.61e-23,64;UBERON:0000073,5.51e-21,54;UBERON:0010371,1.83e-19,73;UBERON:0001049,8.64e-19,52;UBERON:0005068,8.64e-19,52;UBERON:0006241,8.64e-19,52;UBERON:0007135,8.64e-19,52;UBERON:0010314,3.35e-15,92;UBERON:0000955,4.03e-14,47;UBERON:0006238,4.03e-14,47;UBERON:0003056,8.25e-14,49;UBERON:0002616,2.41e-13,46;UBERON:0003080,4.77e-11,40;UBERON:0002020,8.91e-11,34;UBERON:0002780,2.43e-10,39;UBERON:0001890,2.43e-10,39;UBERON:0006240,2.43e-10,39;UBERON:0003076,1.89e-09,12;UBERON:0003057,1.89e-09,12;UBERON:0002240,6.46e-08,6;UBERON:0005174,6.46e-08,6;UBERON:0001137,6.46e-08,6;UBERON:0002410,1.34e-07,9;UBERON:0003528,7.20e-07,29;UBERON:0002791,7.20e-07,29;UBERON:0001893,7.20e-07,29
|phase1_expression=0.160148847104794,0.348975407639361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.680346321208558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.8343270329458,1.31811709640683,2.3331587888914,0.419959264876088,2.87505128729943,0,0,0,0,0,0,0.404632921719196,0.528990979272033,0,0,0,0,0,0,1.49800055259202,2.30530983192933,0,0.405017814995072,0.210324961351382,3.99911378165325,2.65042249141936,0.122490799214954,0.383381884072945,0.919218786610021,6.60695285996332,3.70293280447044,3.5329502648936,0.791317726381163,1.18933936683133,1.04182674111352,3.90856198601933,2.25105044012672,1.83357897332172,2.65165726926301,2.56269025438385,2.05039390407831,0.075726193333184,0.453429360640713,0,0,0,0,0,0,0,0,0,0,1.12674735821344,0,0,0,0.649473123033642,0.253359865475099,1.01104889002957,0,0,0.742210695324124,1.04091196059682,0.913396434936424,1.61430848079241,0.904335843315735,0.470354828542819,0.376999773989026,0.988779870937496,0.144599356919912,0,0.647067399789637,0.220841518460394,0,0,0.292780797011547,1.46612694769419,0,0,0,0,1.9472783122627,0.915001205637253,0.502617408451458,1.21677024134594,1.27857728665165,2.90903262383384,2.75810147215188,0.203678727700633,0,0,0.210441855886474,0.520481771850815,1.14951052216736,0.720248519221397,1.05493372485001,4.01415344992834,2.17793324484245,3.18585863503078,1.03481348295606,0.431135985865684,0.756424320671277,0.351902248327898,0.43839146485515,0.278047249225598,0.696504333044333,0.823128545631774,0.59710280045548,0,0,0,1.03562886267751,0.703578179943289,0.36012412292203,0.946978942340841,0.590292695242212,0.308534225774757,0.232533944750408,0,0.700592054203017,0.493679549740441,0.164167464079095,0.243206428637567,0,0,0,1.89260953707715,0.720332286654991,0,0,0.639864751605702,0.928946687441754,0.128867461322093,0.403367049246685,0.444756087689741,0.190225626112559,0,0.164698954724011,0,0,0.19496408711912,0,0,0,0,0.342745537829186,0,0.203651327845314,0.193952487167626,0.140271639780637,0.442655759869801,0.295220295959204,0,0.123397163921801,0,0.166845105716094,0,0,0,0,0,0,0,0.274561413188081,0,0,0,0,0,0,0.554259570499814,0.568474235311454,0,0.169745085775188,0,0,0,0.195133647857799,0.315270288212382,0.221464689648775,0,0.327726629431476,0,0.144649058581512,0,0,0.491764273019036,0,2.72936002979246,3.39913891117389,0,0.504941854408746,1.26203287766503,0.780877488593277,2.58508077279359,1.67278158566786,3.11918143715352,4.81230102341015,1.21443210502468,1.75353514746787,3.16230222357219,2.24924921495265,0.141940085208269,0,0.162886959353576,0.164970122972535,0,0.485561272309963,0,0,0,0,0,0,0,0,0,0,1.02131881726136,0.720244376125241,0.258717367565509,0.214337035031592,1.41872186913819,1.60531935841864,2.79733335023606,2.43571959291679,3.98941903708308,5.2958017715955,0,0.65954501176592,0.645857706783622,0.422190474497091,0.238744688006273,0.492422699235184,0,3.52308073819968,0,0.206386867963223,0.185194527369712,0,0,0,0,0,0,0,0.316335993581135,0.406638934253697,0.216010681643603,0.627264888043406,0,0,0.330613822901344,0,0.129614973291793,0.621339313086926,0,0.747582730219894,0.496375471371293,1.36115831840833,0.645799117388655,1.01373675294467,0.938857909166032,0.911430693907651,1.57289016638566,1.69108884578204,0.576060012515731,0,0.202725215290164,0.205421914329655,0.25984164595559,0.179026695667481,0,0,0,0,0,0,0.194915761479505,0.0962118416403295,0.116876902181569,0.226730383615211,1.99787358036658,3.76798197759798,2.68615386182526,0.19318959403219,0.93841237725591,0.183151624267265,0.428736758158132,0,0.564751842617067,1.84130094602871,1.14579102687879,2.40594455281163,0,1.5107877947794,1.35004500046361,2.2516060161211,1.81256963593682,2.5888015587591,0.31136204275253,1.19707462020309,0.512200817262403,0.729320151204882,0.209613162627982,0.183843508450014,0.888986911206461,0.618105171716683,0.64183841918363,0.758091635291392,1.77435509923168,0.754505365544305,0.561849044819294,1.02440243847791,0.574354689556133,0.952587382566147,1.27472758539341,1.54327376370964,1.64834360321323,1.03039244094078,0,1.4198064492747,0.715308569841963,0.872078499793971,1.12931256498397,0.423073039458382,1.09756783723664,0.789209134313529,0.407412341537585,0.561142271657738,0.949080144993393,0.492522411877817,2.45538625901814,0,0.578719832943424,2.74791635731741,0.701794825336225,0.644613162144895,1.14772999241306,0,0.695603506861264
|phase1_expression=0.160148847104794,0.348975407639361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.680346321208558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.8343270329458,1.31811709640683,2.3331587888914,0.419959264876088,2.87505128729943,0,0,0,0,0,0,0.404632921719196,0.528990979272033,0,0,0,0,0,0,1.49800055259202,2.30530983192933,0,0.405017814995072,0.210324961351382,3.99911378165325,2.65042249141936,0.122490799214954,0.383381884072945,0.919218786610021,6.60695285996332,3.70293280447044,3.5329502648936,0.791317726381163,1.18933936683133,1.04182674111352,3.90856198601933,2.25105044012672,1.83357897332172,2.65165726926301,2.56269025438385,2.05039390407831,0.075726193333184,0.453429360640713,0,0,0,0,0,0,0,0,0,0,1.12674735821344,0,0,0,0.649473123033642,0.253359865475099,1.01104889002957,0,0,0.742210695324124,1.04091196059682,0.913396434936424,1.61430848079241,0.904335843315735,0.470354828542819,0.376999773989026,0.988779870937496,0.144599356919912,0,0.647067399789637,0.220841518460394,0,0,0.292780797011547,1.46612694769419,0,0,0,0,1.9472783122627,0.915001205637253,0.502617408451458,1.21677024134594,1.27857728665165,2.90903262383384,2.75810147215188,0.203678727700633,0,0,0.210441855886474,0.520481771850815,1.14951052216736,0.720248519221397,1.05493372485001,4.01415344992834,2.17793324484245,3.18585863503078,1.03481348295606,0.431135985865684,0.756424320671277,0.351902248327898,0.43839146485515,0.278047249225598,0.696504333044333,0.823128545631774,0.59710280045548,0,0,0,1.03562886267751,0.703578179943289,0.36012412292203,0.946978942340841,0.590292695242212,0.308534225774757,0.232533944750408,0,0.700592054203017,0.493679549740441,0.164167464079095,0.243206428637567,0,0,0,1.89260953707715,0.720332286654991,0,0,0.639864751605702,0.928946687441754,0.128867461322093,0.403367049246685,0.444756087689741,0.190225626112559,0,0.164698954724011,0,0,0.19496408711912,0,0,0,0,0.342745537829186,0,0.203651327845314,0.193952487167626,0.140271639780637,0.442655759869801,0.295220295959204,0,0.123397163921801,0,0.166845105716094,0,0,0,0,0,0,0,0.274561413188081,0,0,0,0,0,0,0.554259570499814,0.568474235311454,0,0.169745085775188,0,0,0,0.195133647857799,0.315270288212382,0.221464689648775,0,0.327726629431476,0,0.144649058581512,0,0,0.491764273019036,0,2.72936002979246,3.39913891117389,0,0.504941854408746,1.26203287766503,0.780877488593277,2.58508077279359,1.67278158566786,3.11918143715352,4.81230102341015,1.21443210502468,1.75353514746787,3.16230222357219,2.24924921495265,0.141940085208269,0,0.162886959353576,0.164970122972535,0,0.485561272309963,0,0,0,0,0,0,0,0,0,0,1.02131881726136,0.720244376125241,0.258717367565509,0.214337035031592,1.41872186913819,1.60531935841864,2.79733335023606,2.43571959291679,3.98941903708308,5.2958017715955,0,0.65954501176592,0.645857706783622,0.422190474497091,0.238744688006273,0.492422699235184,0,3.52308073819968,0,0.206386867963223,0.185194527369712,0,0,0,0,0,0,0,0.316335993581135,0.406638934253697,0.216010681643603,0.627264888043406,0,0,0.330613822901344,0,0.129614973291793,0.621339313086926,0,0.747582730219894,0.496375471371293,1.36115831840833,0.645799117388655,1.01373675294467,0.938857909166032,0.911430693907651,1.57289016638566,1.69108884578204,0.576060012515731,0,0.202725215290164,0.205421914329655,0.25984164595559,0.179026695667481,0,0,0,0,0,0,0.194915761479505,0.0962118416403295,0.116876902181569,0.226730383615211,1.99787358036658,3.76798197759798,2.68615386182526,0.19318959403219,0.93841237725591,0.183151624267265,0.428736758158132,0,0.564751842617067,1.84130094602871,1.14579102687879,2.40594455281163,0,1.5107877947794,1.35004500046361,2.2516060161211,1.81256963593682,2.5888015587591,0.31136204275253,1.19707462020309,0.512200817262403,0.729320151204882,0.209613162627982,0.183843508450014,0.888986911206461,0.618105171716683,0.64183841918363,0.758091635291392,1.77435509923168,0.754505365544305,0.561849044819294,1.02440243847791,0.574354689556133,0.952587382566147,1.27472758539341,1.54327376370964,1.64834360321323,1.03039244094078,0,1.4198064492747,0.715308569841963,0.872078499793971,1.12931256498397,0.423073039458382,1.09756783723664,0.789209134313529,0.407412341537585,0.561142271657738,0.949080144993393,0.492522411877817,2.45538625901814,0,0.578719832943424,2.74791635731741,0.701794825336225,0.644613162144895,1.14772999241306,0,0.695603506861264
|short_description=p2@Frmpd1
|short_description=p2@Frmpd1
}}
}}

Latest revision as of 00:52, 27 September 2015

Short description:p2@Frmpd1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Frmpd1_5end
Coexpression cluster:NA
Association with transcript: -23bp_to_ENSMUST00000134280_5end
EntrezGene:Frmpd1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Frmpd1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.16
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.35
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.68
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C22.83
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B81.32
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C32.33
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.42
Mouse Astrocytes, donor3.CNhs12107.11633-122C42.88
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.40
Mouse Granule cells, donor2.CNhs12357.11731-123E30.53
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C81.50
Mouse Microglia, donor2.CNhs12634.11736-123E82.31
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.00
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.41
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.21
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F14.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D52.65
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.12
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.38
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.92
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D36.61
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F33.70
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D73.53
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.79
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F41.19
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D81.04
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E43.91
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E52.25
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I61.83
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D62.65
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F62.56
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E12.05
Mouse Schwann, donor1.CNhs12507.11728-123D90.08
Mouse Schwann, donor2.CNhs12573.11746-123F90.45
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G61.13
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.65
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.25
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G31.01
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.00
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.74
adrenal gland, embryo E14.CNhs11038.406-44C51.04
adrenal gland, embryo E16.CNhs11004.1254-43D60.91
adrenal gland, embryo E17.CNhs11043.1263-45I11.61
adrenal gland, embryo E18.CNhs11026.1262-18F50.90
adrenal gland, neonate N00.CNhs11191.1311-23C10.47
adrenal gland, neonate N25.CNhs11223.1377-27I30.38
amnion, adult pregnant day17.5.CNhs10488.583-22A80.99
aorta, adult.CNhs10498.46-23H10.14
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.65
bone (os femoris), neonate N16.CNhs11225.1525-43A60.22
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.29
cerebellum, neonate N30.CNhs11135.1395-42I21.47
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A41.95
corpus striatum, adult.CNhs10487.19-21D80.92
corpus striatum, neonate N00.CNhs11226.630-43F10.50
cortex, adult.CNhs10473.12-14D51.22
cortex, neonate N30.CNhs11107.1392-42F21.28
diencephalon, adult.CNhs10482.20-12F22.91
diencephalon, neonate N30.CNhs11201.1388-42B22.76
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.20
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.21
eyeball, embryo E12.CNhs11016.345-16C60.52
eyeball, embryo E14.CNhs10521.399-16E21.15
eyeball, embryo E15.CNhs10593.426-16C90.72
eyeball, embryo E17.CNhs11023.1261-18D41.05
eyeball, neonate N00.CNhs11207.633-15C64.01
eyeball, neonate N01.CNhs11140.1532-43E72.18
eyeball, neonate N02.CNhs11205.1551-44G83.19
eyeball, neonate N16.CNhs11188.777-19A21.03
forelimb, embryo E11.CNhs10596.335-25E20.43
forelimb, embryo E12.CNhs10600.359-14H20.76
forelimb, embryo E13.CNhs10589.384-1E20.35
forelimb, embryo E14.CNhs10577.413-26A80.44
forelimb, embryo E15.CNhs11007.437-20E70.28
forelimb, embryo E17.CNhs10598.1517-43C40.70
forelimb, embryo E18.CNhs11008.1520-43B50.82
gonad, embryo E13.CNhs11044.1564-45I60.60
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E91.04
heart, embryo E12.CNhs11015.353-12F50.70
heart, embryo E13.CNhs11013.376-3I90.36
heart, embryo E14.CNhs10597.403-26D40.95
heart, embryo E15.CNhs11017.431-16C80.59
heart, embryo E16.CNhs11021.457-17C60.31
heart, embryo E17.CNhs11025.479-18E50.23
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.70
heart, neonate N03.CNhs11221.1349-25I20.49
heart, neonate N10.CNhs11118.749-24G10.16
heart, neonate N16.CNhs11209.782-15G10.24
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E81.89
hippocampus, neonate N00.CNhs11228.627-43G10.72
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.64
intestine, embryo E13.CNhs11010.381-16D50.93
intestine, embryo E15.CNhs10602.976-16D80.13
intestine, embryo E16.CNhs10585.463-22H40.40
intestine, embryo E17.CNhs10582.482-18D30.44
intestine, embryo E18.CNhs10526.1289-20F70.19
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.16
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.19
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.34
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.20
kidney, embryo E18.CNhs11001.1288-20C70.19
kidney, neonate N00.CNhs11214.646-21G70.14
kidney, neonate N10.CNhs11206.758-6D50.44
kidney, neonate N20.CNhs11113.832-19I10.30
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.12
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.17
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.27
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.55
lung, embryo E12.CNhs10522.354-16G20.57
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.17
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.20
lung, neonate N06.CNhs11212.683-20E50.32
lung, neonate N07.CNhs11111.715-19A30.22
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.33
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.14
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.49
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C22.73
medulla oblongata, neonate N30.CNhs11200.1396-42A33.40
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.50
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E11.26
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.78
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E32.59
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D71.67
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D83.12
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D94.81
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D41.21
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D51.75
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D63.16
olfactory brain, adult.CNhs10489.18-22I92.25
ovary, adult.CNhs10507.91-2I70.14
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.16
oviduct, adult pregnant day01.CNhs10500.988-6G60.16
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.49
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G81.02
pituitary gland, embryo E12.CNhs11018.346-16E60.72
pituitary gland, embryo E13.CNhs11009.370-44C70.26
pituitary gland, embryo E14.CNhs11037.398-44A50.21
pituitary gland, embryo E15.CNhs10592.427-16B91.42
pituitary gland, embryo E16.CNhs11036.449-43F61.61
pituitary gland, embryo E17.CNhs11039.1265-44F52.80
pituitary gland, neonate N00.CNhs11190.1308-22E92.44
placenta, adult pregnant day10.CNhs10472.539-13I73.99
placenta, adult pregnant day17.CNhs10464.577-18G35.30
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.66
skin, neonate N00.CNhs11124.650-25G40.65
skin, neonate N03.CNhs11215.662-22H30.42
skin, neonate N06.CNhs11097.693-20I50.24
skin, neonate N10.CNhs11108.762-6C40.49
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C93.52
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.21
spleen, embryo E18.CNhs11011.1271-21F20.19
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.32
stomach, embryo E15.CNhs10603.1252-16G80.41
stomach, embryo E16.CNhs11022.459-17D40.22
stomach, embryo E17.CNhs11006.1035-18D50.63
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.00
stomach, neonate N07.CNhs11210.718-18A90.33
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.13
submandibular gland, adult.CNhs10469.59-29C10.62
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.75
testis, embryo E15.CNhs11034.443-27C50.50
testis, embryo E16.CNhs11033.470-26G51.36
testis, embryo E17.CNhs11029.486-18I50.65
testis, embryo E18.CNhs11027.503-18G51.01
testis, neonate N00.CNhs11189.1300-22B70.94
testis, neonate N07.CNhs11222.726-26I40.91
testis, neonate N10.CNhs11204.763-44D91.57
testis, neonate N20.CNhs11110.839-18H31.69
testis, neonate N30.CNhs11130.1391-42E20.58
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.20
thymus, embryo E15.CNhs11005.430-45I20.21
thymus, embryo E16.CNhs11002.456-26C50.26
thymus, embryo E17.CNhs10581.478-18C10.18
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.19
thymus, neonate N25.CNhs11125.1362-25G70.10
thymus, neonate N30.CNhs11132.1393-42G20.12
tongue, adult.CNhs10499.32-1B40.23
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H32.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F73.77
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G52.69
urinary bladder, adult.CNhs10481.879-12E40.19
uterus, adult pregnant day19.CNhs10497.590-15F50.94
uterus, adult.CNhs10509.92-27E50.18
vagina, adult.CNhs10502.89-27D50.43
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.56
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A21.84
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A31.15
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D72.41
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A51.51
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A61.35
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A72.25
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A81.81
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A92.59
whole body, embryo E11.CNhs11014.324-5I80.31
whole body, embryo E12.CNhs10587.857-27C91.20
whole body, embryo E13.CNhs10512.372-23H20.51
whole body, embryo E14.5.CNhs10578.420-27D20.73
whole body, embryo E14.CNhs10519.395-14B10.21
whole body, embryo E16.CNhs10514.453-14F20.18
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.89
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.62
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.64
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.77
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.75
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.02
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.57
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.27
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.54
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G51.65
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.42
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.72
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.87
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.13
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.42
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.10
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.79
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.49
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G52.46
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.00
whole body, embryo E17.5.CNhs10513.490-9F90.58
whole body, embryo E17.CNhs10517.475-3I52.75
whole body, embryo E18.CNhs10516.493-3B30.70
whole body, neonate N00.CNhs10525.657-19C20.64
whole body, neonate N01.CNhs10576.659-23C61.15
whole body, neonate N06.CNhs10515.692-21D10.00
whole body, neonate N10.CNhs10518.761-6B40.70





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
ectodermal cell1.38e-1444
neurectodermal cell1.38e-1444
neural cell4.96e-1443
neuron1.95e-1133
neuronal stem cell1.95e-1133
neuroblast1.95e-1133
electrically signaling cell1.95e-1133
electrically responsive cell1.05e-0839
electrically active cell1.05e-0839
autonomic neuron1.34e-079

Uber anatomy
Ontology termp-valuen
central nervous system1.56e-2973
nervous system2.52e-2875
ectoderm-derived structure2.61e-2795
ectoderm2.61e-2795
presumptive ectoderm2.61e-2795
neurectoderm6.61e-2364
neural plate6.61e-2364
presumptive neural plate6.61e-2364
regional part of nervous system5.51e-2154
ecto-epithelium1.83e-1973
neural tube8.64e-1952
neural rod8.64e-1952
future spinal cord8.64e-1952
neural keel8.64e-1952
structure with developmental contribution from neural crest3.35e-1592
brain4.03e-1447
future brain4.03e-1447
pre-chordal neural plate8.25e-1449
regional part of brain2.41e-1346
anterior neural tube4.77e-1140
gray matter8.91e-1134
regional part of forebrain2.43e-1039
forebrain2.43e-1039
future forebrain2.43e-1039
posterior neural tube1.89e-0912
chordal neural plate1.89e-0912
spinal cord6.46e-086
dorsal region element6.46e-086
dorsum6.46e-086
autonomic nervous system1.34e-079
brain grey matter7.20e-0729
regional part of telencephalon7.20e-0729
telencephalon7.20e-0729
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