FFCP PHASE1:Mm9::chr1:38721779..38721790,-: Difference between revisions
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{{FFCP|EntrezGene=16764|HGNC=|MCL_coexpression_id=123|UniProt=D3YUR3,F8WJA7,D6RHR2,D3YYI6|association_with_transcript=9bp_to_ENSMUST00000027250,ENSMUST00000039827,ENSMUST00000134963,NM_010678,uc007ass.2_5end|description=CAGE_peak_6_at_Aff3_5end|id=chr1:38721779..38721790,-|ontology_enrichment_celltype=CL:0000988!2.88e-15!32;CL:0002032!2.88e-15!32;CL:0000037!2.88e-15!32;CL:0000566!2.88e-15!32;CL:0000837!2.88e-15!32;CL:0002031!2.52e-11!25;CL:0000838!3.48e-11!12;CL:0000084!4.18e-10!11;CL:0000827!4.18e-10!11;CL:0000542!5.12e-10!13;CL:0000051!5.12e-10!13;CL:0000791!3.37e-08!9;CL:0000789!3.37e-08!9;CL:0002420!3.37e-08!9;CL:0002419!3.37e-08!9;CL:0000790!3.37e-08!9;CL:0002320!4.87e-08!46;CL:0000134!4.87e-08!46;CL:0000624!2.06e-07!8;CL:0000049!5.80e-07!19;CL:0000738!8.98e-07!17;CL:0002087!8.98e-07!17;CL:0000553!9.07e-07!6;CL:0000556!9.07e-07!6|ontology_enrichment_celltype_v019_2=CL:0000988,1.18e-20,32;CL:0002032,1.18e-20,32;CL:0000037,1.18e-20,32;CL:0000837,1.18e-20,32;CL:0002031,4.62e-15,25;CL:0000838,6.62e-15,12;CL:0000542,1.34e-13,13;CL:0000051,1.34e-13,13;CL:0000084,6.25e-13,11;CL:0000827,6.25e-13,11;CL:0002320,7.51e-13,46;CL:0000134,7.51e-13,46;CL:0000219,3.12e-10,54;CL:0000738,6.45e-10,17;CL:0002087,6.45e-10,17;CL:0000791,1.81e-09,9;CL:0000789,1.81e-09,9;CL:0002420,1.81e-09,9;CL:0002419,1.81e-09,9;CL:0000790,1.81e-09,9;CL:0000049,6.42e-09,19;CL:0000553,8.19e-09,6;CL:0000556,8.19e-09,6;CL:0000624,4.94e-08,8|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002193!2.71e-23!48;UBERON:0002390!6.36e-21!45;UBERON:0003061!6.36e-21!45;UBERON:0004177!3.07e-19!29;UBERON:0002405!6.22e-18!70;UBERON:0002370!1.40e-14!23;UBERON:0000974!1.40e-14!23;UBERON:0004807!1.40e-14!23;UBERON:0005058!1.40e-14!23;UBERON:0003351!1.40e-14!23;UBERON:0009113!1.40e-14!23;UBERON:0003295!1.40e-14!23;UBERON:0009722!1.40e-14!23;UBERON:0005562!1.40e-14!23;UBERON:0007690!1.40e-14!23;UBERON:0006562!1.14e-13!24;UBERON:0003408!1.14e-13!24;UBERON:0001557!1.14e-13!24;UBERON:0001042!1.14e-13!24;UBERON:0008814!1.14e-13!24;UBERON:0009145!1.14e-13!24;UBERON:0005057!1.06e-12!51;UBERON:0000072!2.30e-11!27;UBERON:0003081!6.00e-11!88;UBERON:0000065!6.44e-11!41;UBERON:0001004!1.89e-10!42;UBERON:0002384!4.87e-08!46;UBERON:0000063!2.86e-07!35;UBERON:0001041!8.03e-07!92;UBERON:0005911!8.43e-07!69|ontology_enrichment_uberon_v019_2=UBERON:0002193,2.60e-25,48;UBERON:0002405,2.60e-25,48;UBERON:0002390,6.36e-25,45;UBERON:0003061,6.36e-25,45;UBERON:0004177,2.68e-21,29;UBERON:0005057,2.68e-21,29;UBERON:0000077,8.11e-17,35;UBERON:0002370,9.71e-17,23;UBERON:0000974,9.71e-17,23;UBERON:0004807,9.71e-17,23;UBERON:0005058,9.71e-17,23;UBERON:0003351,9.71e-17,23;UBERON:0009113,9.71e-17,23;UBERON:0003295,9.71e-17,23;UBERON:0009722,9.71e-17,23;UBERON:0005562,9.71e-17,23;UBERON:0007690,9.71e-17,23;UBERON:0006562,6.88e-16,24;UBERON:0003408,6.88e-16,24;UBERON:0001557,6.88e-16,24;UBERON:0001042,6.88e-16,24;UBERON:0008814,6.88e-16,24;UBERON:0009145,6.88e-16,24;UBERON:0000072,1.02e-13,27;UBERON:0003081,5.07e-13,87;UBERON:0002384,7.51e-13,46;UBERON:0007811,2.11e-09,36;UBERON:0000065,5.69e-09,41;UBERON:0001004,1.14e-08,42;UBERON:0000926,1.48e-07,120;UBERON:0004120,1.48e-07,120;UBERON:0006603,1.48e-07,120;UBERON:0000153,2.56e-07,43|phase1_expression=0,0,0,0,0,0,0,2.96983643915625,0.985521055061667,1.17032263160997,1.02730780935303,0.319088635981346,2.56801094896809,3.84649770643589,1.66554880907831,1.01237633694913,0.699561878128147,8.83294063003066,14.9454732630255,14.429248161133,0.425216450755349,4.76596565764249,4.17919662622297,0.639969691173627,0.68822784320151,0,0,0,0,0,0,0.635030673459631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.4025215755797,2.90144856804538,2.35265659399725,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.842666520790511,0,0,0,0,0,0,0,0,0,0,0.45673551887624,15.7952109024775,0.148442139064825,0,0,0,0,0.117588707135705,0,0,0.433798070759735,0.884610551949874,0.323533699894818,3.09178125844551,2.90925151881133,0,0,0,0,6.4700167233197,1.19980546198682,4.06624726633807,0,0,0,0,0,0,0,0,2.86136032403214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.1066395619397,1.28673953557358,0.852490498186778,0,0,0,0,0,0,0,0,0,0,0,0.0810688095458557,0,0,0,0,0,0,0,0,0,0,0,0,0,0.474529061544512,0,0,0,0.38992817423824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166845105716094,0.196558995113203,0,0,0,0.50925170356284,1.15078454980324,0.648540907100142,0.274561413188081,0,0,0,0.252578877947112,0,0,0.554259570499814,0,0,0,0,0.167506257441816,0,0,0,0.221464689648775,0.318909537314974,0.655453258862952,1.03610989119537,0.723245292907558,0,0,0,0.275936746304732,0,0,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164970122972535,0,0,0,0,0,0,0,0,0,0.316036757935816,0,0,0,0,0,0,0,0,0,0,0,0,0,0.65954501176592,0,0,0,0,0.874442509889552,0,3.41741761595705,0.206386867963223,0.555583582109135,2.63715839806567,6.15124024744613,5.0331198105435,8.83887835968048,9.23679585336143,8.43019840206985,0,0,0,0,0,0,0,0,0,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0,3.47612232690996,0.810900861160657,0.821687657318618,0.77952493786677,2.32734704367726,5.76175928865668,2.64429988943931,3.54454865218985,5.14928894735553,3.88654713940499,3.7305688500631,3.41102582589133,6.73482891482306,9.35015217452552,0,0,0,0,0.386379188064381,0.187682475451182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0.206035057238894,0,0.252697211763798,0,0.188626341386076,0.0936415074698824,0.128050304809739,0.17230640686684,0,0.347652977834566,0,0,0.294397840268795,0,0,0,0.145346416632329,0,0.0846146078916765,0,0,0,0,0.118635018124174,0.197008964751127,0,0,0,0,0.233931608445408,0.429742108096597,0,0.661774257358546,1.15933917810211|short_description=p6@Aff3}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=16764 | |||
|HGNC= | |||
|MCL_coexpression_id=123 | |||
|TSSclassifier=NA | |||
|UniProt=D3YUR3,F8WJA7,D6RHR2,D3YYI6 | |||
|association_with_transcript=9bp_to_ENSMUST00000027250,ENSMUST00000039827,ENSMUST00000134963,NM_010678,uc007ass.2_5end | |||
|cluster_id=chr1:38721779..38721790,- | |||
|description=CAGE_peak_6_at_Aff3_5end | |||
|id=chr1:38721779..38721790,- | |||
|ontology_enrichment_celltype=CL:0000988!2.88e-15!32;CL:0002032!2.88e-15!32;CL:0000037!2.88e-15!32;CL:0000566!2.88e-15!32;CL:0000837!2.88e-15!32;CL:0002031!2.52e-11!25;CL:0000838!3.48e-11!12;CL:0000084!4.18e-10!11;CL:0000827!4.18e-10!11;CL:0000542!5.12e-10!13;CL:0000051!5.12e-10!13;CL:0000791!3.37e-08!9;CL:0000789!3.37e-08!9;CL:0002420!3.37e-08!9;CL:0002419!3.37e-08!9;CL:0000790!3.37e-08!9;CL:0002320!4.87e-08!46;CL:0000134!4.87e-08!46;CL:0000624!2.06e-07!8;CL:0000049!5.80e-07!19;CL:0000738!8.98e-07!17;CL:0002087!8.98e-07!17;CL:0000553!9.07e-07!6;CL:0000556!9.07e-07!6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,1.18e-20,32;CL:0002032,1.18e-20,32;CL:0000037,1.18e-20,32;CL:0000837,1.18e-20,32;CL:0002031,4.62e-15,25;CL:0000838,6.62e-15,12;CL:0000542,1.34e-13,13;CL:0000051,1.34e-13,13;CL:0000084,6.25e-13,11;CL:0000827,6.25e-13,11;CL:0002320,7.51e-13,46;CL:0000134,7.51e-13,46;CL:0000219,3.12e-10,54;CL:0000738,6.45e-10,17;CL:0002087,6.45e-10,17;CL:0000791,1.81e-09,9;CL:0000789,1.81e-09,9;CL:0002420,1.81e-09,9;CL:0002419,1.81e-09,9;CL:0000790,1.81e-09,9;CL:0000049,6.42e-09,19;CL:0000553,8.19e-09,6;CL:0000556,8.19e-09,6;CL:0000624,4.94e-08,8 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!2.71e-23!48;UBERON:0002390!6.36e-21!45;UBERON:0003061!6.36e-21!45;UBERON:0004177!3.07e-19!29;UBERON:0002405!6.22e-18!70;UBERON:0002370!1.40e-14!23;UBERON:0000974!1.40e-14!23;UBERON:0004807!1.40e-14!23;UBERON:0005058!1.40e-14!23;UBERON:0003351!1.40e-14!23;UBERON:0009113!1.40e-14!23;UBERON:0003295!1.40e-14!23;UBERON:0009722!1.40e-14!23;UBERON:0005562!1.40e-14!23;UBERON:0007690!1.40e-14!23;UBERON:0006562!1.14e-13!24;UBERON:0003408!1.14e-13!24;UBERON:0001557!1.14e-13!24;UBERON:0001042!1.14e-13!24;UBERON:0008814!1.14e-13!24;UBERON:0009145!1.14e-13!24;UBERON:0005057!1.06e-12!51;UBERON:0000072!2.30e-11!27;UBERON:0003081!6.00e-11!88;UBERON:0000065!6.44e-11!41;UBERON:0001004!1.89e-10!42;UBERON:0002384!4.87e-08!46;UBERON:0000063!2.86e-07!35;UBERON:0001041!8.03e-07!92;UBERON:0005911!8.43e-07!69 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,2.60e-25,48;UBERON:0002405,2.60e-25,48;UBERON:0002390,6.36e-25,45;UBERON:0003061,6.36e-25,45;UBERON:0004177,2.68e-21,29;UBERON:0005057,2.68e-21,29;UBERON:0000077,8.11e-17,35;UBERON:0002370,9.71e-17,23;UBERON:0000974,9.71e-17,23;UBERON:0004807,9.71e-17,23;UBERON:0005058,9.71e-17,23;UBERON:0003351,9.71e-17,23;UBERON:0009113,9.71e-17,23;UBERON:0003295,9.71e-17,23;UBERON:0009722,9.71e-17,23;UBERON:0005562,9.71e-17,23;UBERON:0007690,9.71e-17,23;UBERON:0006562,6.88e-16,24;UBERON:0003408,6.88e-16,24;UBERON:0001557,6.88e-16,24;UBERON:0001042,6.88e-16,24;UBERON:0008814,6.88e-16,24;UBERON:0009145,6.88e-16,24;UBERON:0000072,1.02e-13,27;UBERON:0003081,5.07e-13,87;UBERON:0002384,7.51e-13,46;UBERON:0007811,2.11e-09,36;UBERON:0000065,5.69e-09,41;UBERON:0001004,1.14e-08,42;UBERON:0000926,1.48e-07,120;UBERON:0004120,1.48e-07,120;UBERON:0006603,1.48e-07,120;UBERON:0000153,2.56e-07,43 | |||
|phase1_expression=0,0,0,0,0,0,0,2.96983643915625,0.985521055061667,1.17032263160997,1.02730780935303,0.319088635981346,2.56801094896809,3.84649770643589,1.66554880907831,1.01237633694913,0.699561878128147,8.83294063003066,14.9454732630255,14.429248161133,0.425216450755349,4.76596565764249,4.17919662622297,0.639969691173627,0.68822784320151,0,0,0,0,0,0,0.635030673459631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.4025215755797,2.90144856804538,2.35265659399725,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.842666520790511,0,0,0,0,0,0,0,0,0,0,0.45673551887624,15.7952109024775,0.148442139064825,0,0,0,0,0.117588707135705,0,0,0.433798070759735,0.884610551949874,0.323533699894818,3.09178125844551,2.90925151881133,0,0,0,0,6.4700167233197,1.19980546198682,4.06624726633807,0,0,0,0,0,0,0,0,2.86136032403214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.1066395619397,1.28673953557358,0.852490498186778,0,0,0,0,0,0,0,0,0,0,0,0.0810688095458557,0,0,0,0,0,0,0,0,0,0,0,0,0,0.474529061544512,0,0,0,0.38992817423824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166845105716094,0.196558995113203,0,0,0,0.50925170356284,1.15078454980324,0.648540907100142,0.274561413188081,0,0,0,0.252578877947112,0,0,0.554259570499814,0,0,0,0,0.167506257441816,0,0,0,0.221464689648775,0.318909537314974,0.655453258862952,1.03610989119537,0.723245292907558,0,0,0,0.275936746304732,0,0,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164970122972535,0,0,0,0,0,0,0,0,0,0.316036757935816,0,0,0,0,0,0,0,0,0,0,0,0,0,0.65954501176592,0,0,0,0,0.874442509889552,0,3.41741761595705,0.206386867963223,0.555583582109135,2.63715839806567,6.15124024744613,5.0331198105435,8.83887835968048,9.23679585336143,8.43019840206985,0,0,0,0,0,0,0,0,0,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0,3.47612232690996,0.810900861160657,0.821687657318618,0.77952493786677,2.32734704367726,5.76175928865668,2.64429988943931,3.54454865218985,5.14928894735553,3.88654713940499,3.7305688500631,3.41102582589133,6.73482891482306,9.35015217452552,0,0,0,0,0.386379188064381,0.187682475451182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0.206035057238894,0,0.252697211763798,0,0.188626341386076,0.0936415074698824,0.128050304809739,0.17230640686684,0,0.347652977834566,0,0,0.294397840268795,0,0,0,0.145346416632329,0,0.0846146078916765,0,0,0,0,0.118635018124174,0.197008964751127,0,0,0,0,0.233931608445408,0.429742108096597,0,0.661774257358546,1.15933917810211 | |||
|short_description=p6@Aff3 | |||
}} |
Latest revision as of 02:55, 27 September 2015
Short description: | p6@Aff3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_Aff3_5end |
Coexpression cluster: | MCL_coexpression_mm9:123 |
Association with transcript: | 9bp_to_ENSMUST00000027250, ENSMUST00000039827, ENSMUST00000134963, NM_010678, uc007ass.2_5end |
EntrezGene: | Aff3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 1.18e-20 | 32 |
hematopoietic oligopotent progenitor cell | 1.18e-20 | 32 |
hematopoietic stem cell | 1.18e-20 | 32 |
hematopoietic multipotent progenitor cell | 1.18e-20 | 32 |
hematopoietic lineage restricted progenitor cell | 4.62e-15 | 25 |
lymphoid lineage restricted progenitor cell | 6.62e-15 | 12 |
lymphocyte | 1.34e-13 | 13 |
common lymphoid progenitor | 1.34e-13 | 13 |
T cell | 6.25e-13 | 11 |
pro-T cell | 6.25e-13 | 11 |
connective tissue cell | 7.51e-13 | 46 |
mesenchymal cell | 7.51e-13 | 46 |
motile cell | 3.12e-10 | 54 |
leukocyte | 6.45e-10 | 17 |
nongranular leukocyte | 6.45e-10 | 17 |
mature alpha-beta T cell | 1.81e-09 | 9 |
alpha-beta T cell | 1.81e-09 | 9 |
immature T cell | 1.81e-09 | 9 |
mature T cell | 1.81e-09 | 9 |
immature alpha-beta T cell | 1.81e-09 | 9 |
common myeloid progenitor | 6.42e-09 | 19 |
megakaryocyte progenitor cell | 8.19e-09 | 6 |
megakaryocyte | 8.19e-09 | 6 |
CD4-positive, alpha-beta T cell | 4.94e-08 | 8 |
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 2.60e-25 | 48 |
immune system | 2.60e-25 | 48 |
hematopoietic system | 6.36e-25 | 45 |
blood island | 6.36e-25 | 45 |
hemopoietic organ | 2.68e-21 | 29 |
immune organ | 2.68e-21 | 29 |
mixed endoderm/mesoderm-derived structure | 8.11e-17 | 35 |
thymus | 9.71e-17 | 23 |
neck | 9.71e-17 | 23 |
respiratory system epithelium | 9.71e-17 | 23 |
hemolymphoid system gland | 9.71e-17 | 23 |
pharyngeal epithelium | 9.71e-17 | 23 |
thymic region | 9.71e-17 | 23 |
pharyngeal gland | 9.71e-17 | 23 |
entire pharyngeal arch endoderm | 9.71e-17 | 23 |
thymus primordium | 9.71e-17 | 23 |
early pharyngeal endoderm | 9.71e-17 | 23 |
pharynx | 6.88e-16 | 24 |
gland of gut | 6.88e-16 | 24 |
upper respiratory tract | 6.88e-16 | 24 |
chordate pharynx | 6.88e-16 | 24 |
pharyngeal arch system | 6.88e-16 | 24 |
pharyngeal region of foregut | 6.88e-16 | 24 |
segment of respiratory tract | 1.02e-13 | 27 |
lateral plate mesoderm | 5.07e-13 | 87 |
connective tissue | 7.51e-13 | 46 |
craniocervical region | 2.11e-09 | 36 |
respiratory tract | 5.69e-09 | 41 |
respiratory system | 1.14e-08 | 42 |
mesoderm | 1.48e-07 | 120 |
mesoderm-derived structure | 1.48e-07 | 120 |
presumptive mesoderm | 1.48e-07 | 120 |
anterior region of body | 2.56e-07 | 43 |