FFCP PHASE1:Mm9::chr2:91367100..91367144,+: Difference between revisions
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{{FFCP|EntrezGene=75786|HGNC=|MCL_coexpression_id=60|UniProt=|association_with_transcript=0bp_to_ENSMUST00000123253,uc008kwc.1_5end|description=CAGE_peak_2_at_Ckap5_5end|id=chr2:91367100..91367144,+|ontology_enrichment_celltype=CL:0000117!6.24e-08!23;CL:0000337!6.24e-08!23|ontology_enrichment_celltype_v019_2=CL:0000117,3.22e-08,23;CL:0000337,3.22e-08,23|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!2.47e-15!52;UBERON:0005068!2.47e-15!52;UBERON:0006241!2.47e-15!52;UBERON:0007135!2.47e-15!52;UBERON:0002346!3.68e-15!71;UBERON:0003075!3.68e-15!71;UBERON:0007284!3.68e-15!71;UBERON:0000073!1.25e-14!75;UBERON:0001016!1.25e-14!75;UBERON:0000955!1.31e-14!50;UBERON:0006238!1.31e-14!50;UBERON:0001017!2.05e-14!73;UBERON:0005743!2.05e-14!73;UBERON:0002616!3.37e-14!49;UBERON:0000033!6.85e-14!63;UBERON:0004121!6.10e-13!102;UBERON:0000924!6.10e-13!102;UBERON:0006601!6.10e-13!102;UBERON:0002020!4.05e-12!34;UBERON:0003056!1.05e-11!49;UBERON:0003080!7.69e-11!40;UBERON:0002780!2.56e-10!39;UBERON:0001890!2.56e-10!39;UBERON:0006240!2.56e-10!39;UBERON:0002791!5.98e-10!29;UBERON:0003528!5.98e-10!29;UBERON:0001893!5.98e-10!29;UBERON:0000153!1.99e-09!94;UBERON:0007811!3.43e-09!86;UBERON:0002021!2.63e-07!10;UBERON:0000411!2.63e-07!10;UBERON:0001950!2.63e-07!10|ontology_enrichment_uberon_v019_2=UBERON:0002346,1.67e-17,64;UBERON:0003075,1.67e-17,64;UBERON:0007284,1.67e-17,64;UBERON:0000073,2.42e-17,54;UBERON:0001049,5.78e-16,52;UBERON:0005068,5.78e-16,52;UBERON:0006241,5.78e-16,52;UBERON:0007135,5.78e-16,52;UBERON:0001017,1.08e-15,73;UBERON:0001016,1.17e-15,75;UBERON:0010371,6.60e-15,73;UBERON:0002020,5.80e-14,34;UBERON:0004121,6.09e-14,95;UBERON:0000924,6.09e-14,95;UBERON:0006601,6.09e-14,95;UBERON:0000955,3.64e-13,47;UBERON:0006238,3.64e-13,47;UBERON:0002616,1.09e-12,46;UBERON:0003056,5.07e-12,49;UBERON:0003080,2.34e-11,40;UBERON:0003528,2.92e-11,29;UBERON:0002791,2.92e-11,29;UBERON:0001893,2.92e-11,29;UBERON:0002780,9.86e-11,39;UBERON:0001890,9.86e-11,39;UBERON:0006240,9.86e-11,39;UBERON:0002021,7.80e-09,10;UBERON:0000411,7.80e-09,10;UBERON:0001950,7.80e-09,10;UBERON:0010314,9.69e-09,92;UBERON:0000956,5.34e-07,21;UBERON:0001869,5.34e-07,21;UBERON:0000203,5.34e-07,21;UBERON:0002619,6.15e-07,17|phase1_expression=0.160148847104794,0,0,0.90739263392049,0.500895729946347,0,0.700837921786577,0.258246646883153,0,0,0,0.0797721589953364,0.171200729931206,0,0,0.202475267389826,0.699561878128147,0.315462165358238,0.137114433605739,0,2.8064285749853,0.695036658406197,0.261199789138935,0.319984845586813,0.22940928106717,0,0.86152399231815,0,0.190023419456374,0,0,0,0,0,0.288851619751275,0.166234645358492,0.204169356262369,0.418531630736908,2.3440060335714,1.57057123192139,1.76469446409304,0.683045484958446,1.45653105909346,0.503587271902309,0.101376931219515,0.550640256485045,0.782391344348039,0.872100625521786,0,0.388859798148567,0.699932108126813,0,0.167782606057736,0,0.672187598284928,0.257259436035947,0.573066879877513,0.515672092277442,4.04632921719196,1.5869729378161,1.26766280701236,0.338844532069132,0,0,0,0.7104801149461,0,0.768436610643109,0.622137673850866,1.08004750665353,1.26194976810829,2.57085885963423,1.32521124570968,2.32732518508413,0.958454710182364,0.919218786610021,5.50579404996943,5.2351808614927,4.6081959976873,1.71452174049252,1.46380229763855,3.64639359389732,3.62937898701795,8.4414391504752,5.50073691996516,7.95497180778903,8.39992916714707,2.05039390407831,0.757261933331841,2.04043212288321,0,0.860423876981386,0,0,0,0,0.140444420131752,1.70430322578058,1.81850203222008,1.06001872353102,1.12674735821344,0,7.64415719119937,7.11066703153331,0.432982082022428,0.506719730950197,0,0.22836775943812,0.517875767294343,0.445326417194474,0.693941307064543,0.304465478312141,0.922461989024234,1.05505848386836,0.470354828542819,1.0053327306374,0.247194967734374,0.144599356919912,0.884610551949874,0.323533699894818,0.883366073841574,0.969750506270444,0,4.9772735491963,7.74952815209784,0.255457055208591,0.479260498023681,0,0.254140454146129,5.69204429738326,1.83000241127451,9.04711335212624,6.25767552692195,5.11430914660661,6.02585329222724,4.05603157669394,0.712875546952214,0.622034853050465,1.26361379216837,0.420883711772948,0.910843100738926,0.459804208866946,1.44049703844279,2.26057226753573,2.10913147369116,1.7935920839879,1.49922759295566,2.84573707812917,1.07783996466421,1.13463648100692,0.527853372491847,1.31517439456545,1.39023624612799,1.0447564995665,1.02891068203972,1.19420560091096,0,0.772043721344145,0,0.828503090142008,0.469052119962192,0.540186184383045,1.65721314909647,0.393528463494808,0.462801338662135,1.39520366850245,0.268273401399619,0.583826711835847,0.987359099480883,0.656669856316381,0.405344047729279,0.146199987425332,0.878200461164203,0.134206418760372,6.30869845692382,7.30622747892919,0,0,1.2797295032114,1.62565670302307,1.28867461322093,0.605050573870028,1.55664630691409,0.951128130562796,0,0.658795818896044,0.502670417600539,0.198956472041151,1.16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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=75786 | |||
|HGNC= | |||
|MCL_coexpression_id=60 | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENSMUST00000123253,uc008kwc.1_5end | |||
|cluster_id=chr2:91367100..91367144,+ | |||
|description=CAGE_peak_2_at_Ckap5_5end | |||
|id=chr2:91367100..91367144,+ | |||
|ontology_enrichment_celltype=CL:0000117!6.24e-08!23;CL:0000337!6.24e-08!23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,3.22e-08,23;CL:0000337,3.22e-08,23 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!2.47e-15!52;UBERON:0005068!2.47e-15!52;UBERON:0006241!2.47e-15!52;UBERON:0007135!2.47e-15!52;UBERON:0002346!3.68e-15!71;UBERON:0003075!3.68e-15!71;UBERON:0007284!3.68e-15!71;UBERON:0000073!1.25e-14!75;UBERON:0001016!1.25e-14!75;UBERON:0000955!1.31e-14!50;UBERON:0006238!1.31e-14!50;UBERON:0001017!2.05e-14!73;UBERON:0005743!2.05e-14!73;UBERON:0002616!3.37e-14!49;UBERON:0000033!6.85e-14!63;UBERON:0004121!6.10e-13!102;UBERON:0000924!6.10e-13!102;UBERON:0006601!6.10e-13!102;UBERON:0002020!4.05e-12!34;UBERON:0003056!1.05e-11!49;UBERON:0003080!7.69e-11!40;UBERON:0002780!2.56e-10!39;UBERON:0001890!2.56e-10!39;UBERON:0006240!2.56e-10!39;UBERON:0002791!5.98e-10!29;UBERON:0003528!5.98e-10!29;UBERON:0001893!5.98e-10!29;UBERON:0000153!1.99e-09!94;UBERON:0007811!3.43e-09!86;UBERON:0002021!2.63e-07!10;UBERON:0000411!2.63e-07!10;UBERON:0001950!2.63e-07!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002346,1.67e-17,64;UBERON:0003075,1.67e-17,64;UBERON:0007284,1.67e-17,64;UBERON:0000073,2.42e-17,54;UBERON:0001049,5.78e-16,52;UBERON:0005068,5.78e-16,52;UBERON:0006241,5.78e-16,52;UBERON:0007135,5.78e-16,52;UBERON:0001017,1.08e-15,73;UBERON:0001016,1.17e-15,75;UBERON:0010371,6.60e-15,73;UBERON:0002020,5.80e-14,34;UBERON:0004121,6.09e-14,95;UBERON:0000924,6.09e-14,95;UBERON:0006601,6.09e-14,95;UBERON:0000955,3.64e-13,47;UBERON:0006238,3.64e-13,47;UBERON:0002616,1.09e-12,46;UBERON:0003056,5.07e-12,49;UBERON:0003080,2.34e-11,40;UBERON:0003528,2.92e-11,29;UBERON:0002791,2.92e-11,29;UBERON:0001893,2.92e-11,29;UBERON:0002780,9.86e-11,39;UBERON:0001890,9.86e-11,39;UBERON:0006240,9.86e-11,39;UBERON:0002021,7.80e-09,10;UBERON:0000411,7.80e-09,10;UBERON:0001950,7.80e-09,10;UBERON:0010314,9.69e-09,92;UBERON:0000956,5.34e-07,21;UBERON:0001869,5.34e-07,21;UBERON:0000203,5.34e-07,21;UBERON:0002619,6.15e-07,17 | |||
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| |||
|short_description=p2@Ckap5 | |||
}} |
Latest revision as of 03:01, 27 September 2015
Short description: | p2@Ckap5 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Ckap5_5end |
Coexpression cluster: | MCL_coexpression_mm9:60 |
Association with transcript: | 0bp_to_ENSMUST00000123253, uc008kwc.1_5end |
EntrezGene: | Ckap5 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 3.22e-08 | 23 |
neuroblast (sensu Vertebrata) | 3.22e-08 | 23 |
Ontology term | p-value | n |
---|---|---|
neurectoderm | 1.67e-17 | 64 |
neural plate | 1.67e-17 | 64 |
presumptive neural plate | 1.67e-17 | 64 |
regional part of nervous system | 2.42e-17 | 54 |
neural tube | 5.78e-16 | 52 |
neural rod | 5.78e-16 | 52 |
future spinal cord | 5.78e-16 | 52 |
neural keel | 5.78e-16 | 52 |
central nervous system | 1.08e-15 | 73 |
nervous system | 1.17e-15 | 75 |
ecto-epithelium | 6.60e-15 | 73 |
gray matter | 5.80e-14 | 34 |
ectoderm-derived structure | 6.09e-14 | 95 |
ectoderm | 6.09e-14 | 95 |
presumptive ectoderm | 6.09e-14 | 95 |
brain | 3.64e-13 | 47 |
future brain | 3.64e-13 | 47 |
regional part of brain | 1.09e-12 | 46 |
pre-chordal neural plate | 5.07e-12 | 49 |
anterior neural tube | 2.34e-11 | 40 |
brain grey matter | 2.92e-11 | 29 |
regional part of telencephalon | 2.92e-11 | 29 |
telencephalon | 2.92e-11 | 29 |
regional part of forebrain | 9.86e-11 | 39 |
forebrain | 9.86e-11 | 39 |
future forebrain | 9.86e-11 | 39 |
occipital lobe | 7.80e-09 | 10 |
visual cortex | 7.80e-09 | 10 |
neocortex | 7.80e-09 | 10 |
structure with developmental contribution from neural crest | 9.69e-09 | 92 |
cerebral cortex | 5.34e-07 | 21 |
cerebral hemisphere | 5.34e-07 | 21 |
pallium | 5.34e-07 | 21 |
regional part of cerebral cortex | 6.15e-07 | 17 |