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FFCP PHASE1:Mm9::chr11:120645566..120645575,-: Difference between revisions

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{{FFCP|EntrezGene=19719|HGNC=|UniProt=O09009|association_with_transcript=-45bp_to_ENSMUST00000026156_5end|description=CAGE_peak_4_at_Rfng_5end|id=chr11:120645566..120645575,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000117,7.47e-11,23;CL:0000337,7.47e-11,23|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002020!3.72e-07!34|ontology_enrichment_uberon_v019_2=UBERON:0001049,1.64e-13,52;UBERON:0005068,1.64e-13,52;UBERON:0006241,1.64e-13,52;UBERON:0007135,1.64e-13,52;UBERON:0000073,7.61e-13,54;UBERON:0001017,2.30e-12,73;UBERON:0002020,3.05e-12,34;UBERON:0001016,7.45e-12,75;UBERON:0002346,4.38e-11,64;UBERON:0003075,4.38e-11,64;UBERON:0007284,4.38e-11,64;UBERON:0003080,1.46e-10,40;UBERON:0002616,5.22e-10,46;UBERON:0000369,7.79e-10,5;UBERON:0002435,7.79e-10,5;UBERON:0000204,7.79e-10,5;UBERON:0010082,7.79e-10,5;UBERON:0004121,9.41e-10,95;UBERON:0000924,9.41e-10,95;UBERON:0006601,9.41e-10,95;UBERON:0000955,1.07e-09,47;UBERON:0006238,1.07e-09,47;UBERON:0003528,1.31e-09,29;UBERON:0002791,1.31e-09,29;UBERON:0001893,1.31e-09,29;UBERON:0002780,1.45e-09,39;UBERON:0001890,1.45e-09,39;UBERON:0006240,1.45e-09,39;UBERON:0003056,5.23e-09,49;UBERON:0010371,5.39e-09,73;UBERON:0002420,1.92e-08,8;UBERON:0007245,1.92e-08,8;UBERON:0010009,1.92e-08,8;UBERON:0010011,1.92e-08,8;UBERON:0000454,1.92e-08,8|phase1_expression=0.160148847104794,2.09385244583617,1.36499771816861,1.20985684522732,0,0.839396359559449,0.467225281191051,0.129123323441576,0,0.234064526321993,0.171217968225505,0.319088635981346,0.513602189793617,0.524522414513984,0.333109761815663,0,0,0.315462165358238,0,0,0.425216450755349,0.397163804803541,0.261199789138935,0.319984845586813,1.14704640533585,1.72269589234506,2.15380998079537,0.861884930743556,0.380046838912748,1.26015064879965,0.665191531965914,0.635030673459631,0.61506478758457,0,0.288851619751275,0.498703936075477,0.204169356262369,1.25559489221072,0.7813353445238,0.523523743973798,1.17646297606203,1.36609096991689,0.485510353031154,0,0.202753862439029,0,0,0,0.659058548203415,0.194429899074283,0.55994568650145,0,0.167782606057736,0,0.336093799142464,0,0,0.515672092277442,1.01158230429799,0.528990979272033,2.53532561402472,0.338844532069132,0,0.899899717281399,0,0,0.599200221036809,2.68952813725088,0.414758449233911,1.21505344498522,0.420649922702764,2.28520787523043,0.883474163806454,1.10241719293459,1.0543001812006,0,0,1.40456071893706,0.307213066512487,1.45074916503213,1.46380229763855,1.04182674111352,1.67509799400829,0,0.763991238884051,1.76777151284201,1.28134512719193,0.931997229126503,0.151452386666368,0.377857800533928,0,0,0.679971333707751,0,0.649776417447669,0.896053774194671,0.561777680527007,0.340860645156116,0.259786004602869,0,0.563373679106722,0,0,0,0,0,0,0.45673551887624,0.517875767294343,0.148442139064825,0,0,0.230615497256059,0.150722640552623,0,0.251333182659351,0.494389935468748,0.433798070759735,0,0.161766849947409,0.441683036920787,0,1.86391761218122,0.585561594023094,2.93225389538837,0.766371165625774,0,0,0,1.3481157546434,1.83000241127451,2.89005009859588,2.25971616249959,2.04572365864264,1.0389402227978,1.1356888414743,0.203678727700633,0.124406970610093,0,1.47309299120532,0,0.459804208866946,0.540186389416048,0,0.544291993210623,0,0.374806898238915,0.258703370739016,0.215567992932842,0,0,0.43839146485515,0.278047249225598,0,0.411564272815887,0.199034266818493,0,0.257347907114715,0,0.207125772535502,0,0.180062061461015,0,0.196764231747404,0.308534225774757,0.930135779001631,0.268273401399619,0.233530684734339,0,0.164167464079095,0.243206428637567,0,0.219550115291051,0.536825675041487,1.05144974282064,1.3377599609307,0.660837565967596,1.32225283331772,0.213288250535234,0,0.515469845288373,0.201683524623343,0.22237804384487,0.190225626112559,2.37264530772256,0.658795818896044,0.251335208800269,0.596869416123452,0.974820435595601,0,1.72910439899755,0.597423819763102,0.379335801906163,0.342745537829186,1.1270773567308,0.203651327845314,0.193952487167626,0.0701358198903186,0.758838445491087,0.295220295959204,0.470996183524124,0.246794327843601,0,0.166845105716094,0.196558995113203,0,0.202860121388503,0.964708639009667,0.25462585178142,0,0,0,0,0.372140947668503,0,0.252578877947112,0.358794827043824,0,0.184753190166605,0.568474235311454,0.325929952884052,0,0.234690248288502,0.502518772325447,0,0.195133647857799,0.315270288212382,0.664394068946325,0.318909537314974,0,0,0.289298117163023,0,0,0,0.275936746304732,0.481651769963376,0.35163505977661,0,0.252470927204373,0.315508219416257,0,0,0.238968797952552,0.222798674082394,0.283076530788832,0.404810701674894,0.292255857911312,0,0.642642632843614,0.141940085208269,0.35613120733451,0,0.494910368917606,0,0.242780636154981,0,0.188605079755898,0.885905678642318,0.307435147943927,0.258428293168221,0.363533729477506,0.356497378384721,0.632073515871632,0,0,0.680879211507576,0.18006109403131,0,0.428674070063185,0,1.07021290561242,0,0,0,0.21183207086382,0.220528398054962,0.32977250588296,0,0.482503399425247,0.358117032009409,0.328281799490123,1.45740418314925,1.29797711407357,0,0.412773735926445,0.185194527369712,0.376736914009382,0.27338845544205,0.457556346413045,0.169978429993855,0,0.276399947608848,1.90934123603023,0.158167996790568,0.203319467126849,0,0.209088296014469,0.218362563746178,0.269728692769641,0.0826534557253359,0,0.518459893167171,1.24267862617385,0.56369293868419,0.299033092087958,0,1.16670713006429,0.516639293910924,0.337912250981556,0.117357238645754,0,0.209718688851422,0.483168241652012,0.576060012515731,0,0.405450430580328,0.205421914329655,0.25984164595559,0.179026695667481,0.198681354781265,0.600977247599844,0.443068581523732,0.504832249740738,0.228620419965,0.201652370273681,0.194915761479505,0.481059208201647,0.467507608726276,0.906921534460845,0.665957860122194,0.807424709485281,0.335769232728157,0,0.563047426353546,0,0.643105137237198,0,0.564751842617067,0.920650473014354,0.572895513439397,1.89038500578056,1.37016503954128,0,0,0.900642406448441,0,0,0.103787347584177,1.19707462020309,0.170733605754134,0.243106717068294,0.628839487883947,0.551530525350042,0.222246727801615,0.206035057238894,0,0,0.760437899670719,0.565879024158229,0.187283014939765,0.320125762024346,0.516919220600519,0,0.347652977834566,0.192909220463705,0,0.147198920134397,0,0.177475806159338,0.476872379894642,0.436039249896986,0.564656282491984,0.423073039458382,0.548783918618318,0,0.950628796921032,0,0.593175090620871,0.29551344712669,0.818462086339379,0.619747364743864,0,0.499621155875892,0.935726433781634,0.429742108096597,0.956441660344217,0.661774257358546,0|short_description=p4@Rfng}}
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=19719
|HGNC=
|TSSclassifier=NA
|UniProt=O09009
|association_with_transcript=-45bp_to_ENSMUST00000026156_5end
|cluster_id=chr11:120645566..120645575,-
|description=CAGE_peak_4_at_Rfng_5end
|id=chr11:120645566..120645575,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=CL:0000117,7.47e-11,23;CL:0000337,7.47e-11,23
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002020!3.72e-07!34
|ontology_enrichment_uberon_v019_2=UBERON:0001049,1.64e-13,52;UBERON:0005068,1.64e-13,52;UBERON:0006241,1.64e-13,52;UBERON:0007135,1.64e-13,52;UBERON:0000073,7.61e-13,54;UBERON:0001017,2.30e-12,73;UBERON:0002020,3.05e-12,34;UBERON:0001016,7.45e-12,75;UBERON:0002346,4.38e-11,64;UBERON:0003075,4.38e-11,64;UBERON:0007284,4.38e-11,64;UBERON:0003080,1.46e-10,40;UBERON:0002616,5.22e-10,46;UBERON:0000369,7.79e-10,5;UBERON:0002435,7.79e-10,5;UBERON:0000204,7.79e-10,5;UBERON:0010082,7.79e-10,5;UBERON:0004121,9.41e-10,95;UBERON:0000924,9.41e-10,95;UBERON:0006601,9.41e-10,95;UBERON:0000955,1.07e-09,47;UBERON:0006238,1.07e-09,47;UBERON:0003528,1.31e-09,29;UBERON:0002791,1.31e-09,29;UBERON:0001893,1.31e-09,29;UBERON:0002780,1.45e-09,39;UBERON:0001890,1.45e-09,39;UBERON:0006240,1.45e-09,39;UBERON:0003056,5.23e-09,49;UBERON:0010371,5.39e-09,73;UBERON:0002420,1.92e-08,8;UBERON:0007245,1.92e-08,8;UBERON:0010009,1.92e-08,8;UBERON:0010011,1.92e-08,8;UBERON:0000454,1.92e-08,8
|phase1_expression=0.160148847104794,2.09385244583617,1.36499771816861,1.20985684522732,0,0.839396359559449,0.467225281191051,0.129123323441576,0,0.234064526321993,0.171217968225505,0.319088635981346,0.513602189793617,0.524522414513984,0.333109761815663,0,0,0.315462165358238,0,0,0.425216450755349,0.397163804803541,0.261199789138935,0.319984845586813,1.14704640533585,1.72269589234506,2.15380998079537,0.861884930743556,0.380046838912748,1.26015064879965,0.665191531965914,0.635030673459631,0.61506478758457,0,0.288851619751275,0.498703936075477,0.204169356262369,1.25559489221072,0.7813353445238,0.523523743973798,1.17646297606203,1.36609096991689,0.485510353031154,0,0.202753862439029,0,0,0,0.659058548203415,0.194429899074283,0.55994568650145,0,0.167782606057736,0,0.336093799142464,0,0,0.515672092277442,1.01158230429799,0.528990979272033,2.53532561402472,0.338844532069132,0,0.899899717281399,0,0,0.599200221036809,2.68952813725088,0.414758449233911,1.21505344498522,0.420649922702764,2.28520787523043,0.883474163806454,1.10241719293459,1.0543001812006,0,0,1.40456071893706,0.307213066512487,1.45074916503213,1.46380229763855,1.04182674111352,1.67509799400829,0,0.763991238884051,1.76777151284201,1.28134512719193,0.931997229126503,0.151452386666368,0.377857800533928,0,0,0.679971333707751,0,0.649776417447669,0.896053774194671,0.561777680527007,0.340860645156116,0.259786004602869,0,0.563373679106722,0,0,0,0,0,0,0.45673551887624,0.517875767294343,0.148442139064825,0,0,0.230615497256059,0.150722640552623,0,0.251333182659351,0.494389935468748,0.433798070759735,0,0.161766849947409,0.441683036920787,0,1.86391761218122,0.585561594023094,2.93225389538837,0.766371165625774,0,0,0,1.3481157546434,1.83000241127451,2.89005009859588,2.25971616249959,2.04572365864264,1.0389402227978,1.1356888414743,0.203678727700633,0.124406970610093,0,1.47309299120532,0,0.459804208866946,0.540186389416048,0,0.544291993210623,0,0.374806898238915,0.258703370739016,0.215567992932842,0,0,0.43839146485515,0.278047249225598,0,0.411564272815887,0.199034266818493,0,0.257347907114715,0,0.207125772535502,0,0.180062061461015,0,0.196764231747404,0.308534225774757,0.930135779001631,0.268273401399619,0.233530684734339,0,0.164167464079095,0.243206428637567,0,0.219550115291051,0.536825675041487,1.05144974282064,1.3377599609307,0.660837565967596,1.32225283331772,0.213288250535234,0,0.515469845288373,0.201683524623343,0.22237804384487,0.190225626112559,2.37264530772256,0.658795818896044,0.251335208800269,0.596869416123452,0.974820435595601,0,1.72910439899755,0.597423819763102,0.379335801906163,0.342745537829186,1.1270773567308,0.203651327845314,0.193952487167626,0.0701358198903186,0.758838445491087,0.295220295959204,0.470996183524124,0.246794327843601,0,0.166845105716094,0.196558995113203,0,0.202860121388503,0.964708639009667,0.25462585178142,0,0,0,0,0.372140947668503,0,0.252578877947112,0.358794827043824,0,0.184753190166605,0.568474235311454,0.325929952884052,0,0.234690248288502,0.502518772325447,0,0.195133647857799,0.315270288212382,0.664394068946325,0.318909537314974,0,0,0.289298117163023,0,0,0,0.275936746304732,0.481651769963376,0.35163505977661,0,0.252470927204373,0.315508219416257,0,0,0.238968797952552,0.222798674082394,0.283076530788832,0.404810701674894,0.292255857911312,0,0.642642632843614,0.141940085208269,0.35613120733451,0,0.494910368917606,0,0.242780636154981,0,0.188605079755898,0.885905678642318,0.307435147943927,0.258428293168221,0.363533729477506,0.356497378384721,0.632073515871632,0,0,0.680879211507576,0.18006109403131,0,0.428674070063185,0,1.07021290561242,0,0,0,0.21183207086382,0.220528398054962,0.32977250588296,0,0.482503399425247,0.358117032009409,0.328281799490123,1.45740418314925,1.29797711407357,0,0.412773735926445,0.185194527369712,0.376736914009382,0.27338845544205,0.457556346413045,0.169978429993855,0,0.276399947608848,1.90934123603023,0.158167996790568,0.203319467126849,0,0.209088296014469,0.218362563746178,0.269728692769641,0.0826534557253359,0,0.518459893167171,1.24267862617385,0.56369293868419,0.299033092087958,0,1.16670713006429,0.516639293910924,0.337912250981556,0.117357238645754,0,0.209718688851422,0.483168241652012,0.576060012515731,0,0.405450430580328,0.205421914329655,0.25984164595559,0.179026695667481,0.198681354781265,0.600977247599844,0.443068581523732,0.504832249740738,0.228620419965,0.201652370273681,0.194915761479505,0.481059208201647,0.467507608726276,0.906921534460845,0.665957860122194,0.807424709485281,0.335769232728157,0,0.563047426353546,0,0.643105137237198,0,0.564751842617067,0.920650473014354,0.572895513439397,1.89038500578056,1.37016503954128,0,0,0.900642406448441,0,0,0.103787347584177,1.19707462020309,0.170733605754134,0.243106717068294,0.628839487883947,0.551530525350042,0.222246727801615,0.206035057238894,0,0,0.760437899670719,0.565879024158229,0.187283014939765,0.320125762024346,0.516919220600519,0,0.347652977834566,0.192909220463705,0,0.147198920134397,0,0.177475806159338,0.476872379894642,0.436039249896986,0.564656282491984,0.423073039458382,0.548783918618318,0,0.950628796921032,0,0.593175090620871,0.29551344712669,0.818462086339379,0.619747364743864,0,0.499621155875892,0.935726433781634,0.429742108096597,0.956441660344217,0.661774257358546,0
|short_description=p4@Rfng
}}

Latest revision as of 03:29, 27 September 2015

Short description:p4@Rfng
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_4_at_Rfng_5end
Coexpression cluster:NA
Association with transcript: -45bp_to_ENSMUST00000026156_5end
EntrezGene:Rfng
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p4@Rfng

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.16
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I52.09
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I61.36
CD326+ enterocyte, pool1.CNhs13542.11848-124I31.21
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.84
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.47
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.13
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.23
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.17
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.32
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.51
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.52
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.32
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.43
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.40
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.26
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.32
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D21.15
GP2+ M cell, pool1.CNhs13228.11845-124H91.72
GP2+ M cell, pool2.CNhs13231.11846-124I12.15
GP2+ M cell, pool3.CNhs13240.11847-124I20.86
Ileum epithelium, pool1.CNhs13199.10252-104B90.38
Ileum epithelium, pool2.CNhs13232.10253-104C11.26
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.67
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.64
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.62
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.29
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.50
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.20
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G81.26
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.78
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.52
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G91.18
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H21.37
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.49
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.20
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.66
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.19
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.56
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.17
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.34
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.52
Mouse Granule cells, donor1.CNhs12131.11713-123C31.01
Mouse Granule cells, donor2.CNhs12357.11731-123E30.53
Mouse Granule cells, donor3.CNhs12108.11636-122C72.54
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.34
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.90
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.60
Mouse Microglia, donor2.CNhs12634.11736-123E82.69
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.41
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F51.22
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.42
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F12.29
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.88
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D21.10
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F21.05
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F31.40
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.31
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D41.45
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F41.46
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D81.04
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E41.68
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.76
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D61.77
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F61.28
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.93
Mouse Schwann, donor1.CNhs12507.11728-123D90.15
Mouse Schwann, donor2.CNhs12573.11746-123F90.38
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.68
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.65
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.90
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.56
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.34
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.26
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.56
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.46
accessory axillary lymph node, adult.CNhs10475.1063-29H90.52
adrenal gland, adult.CNhs10508.49-24D70.15
adrenal gland, embryo E14.CNhs11038.406-44C50.00
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.23
adrenal gland, embryo E18.CNhs11026.1262-18F50.15
adrenal gland, neonate N00.CNhs11191.1311-23C10.00
adrenal gland, neonate N25.CNhs11223.1377-27I30.25
amnion, adult pregnant day17.5.CNhs10488.583-22A80.49
aorta, adult.CNhs10498.46-23H10.43
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.16
bone (os femoris), neonate N16.CNhs11225.1525-43A60.44
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H41.86
cerebellum, adult.CNhs10494.15-8B20.59
cerebellum, neonate N30.CNhs11135.1395-42I22.93
colon, adult.CNhs10468.36-18H70.77
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A41.35
corpus striatum, adult.CNhs10487.19-21D81.83
corpus striatum, neonate N00.CNhs11226.630-43F12.89
cortex, adult.CNhs10473.12-14D52.26
cortex, neonate N30.CNhs11107.1392-42F22.05
diencephalon, adult.CNhs10482.20-12F21.04
diencephalon, neonate N30.CNhs11201.1388-42B21.14
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.20
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.12
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G41.47
eyeball, embryo E12.CNhs11016.345-16C60.00
eyeball, embryo E14.CNhs10521.399-16E20.46
eyeball, embryo E15.CNhs10593.426-16C90.54
eyeball, embryo E17.CNhs11023.1261-18D40.00
eyeball, neonate N00.CNhs11207.633-15C60.54
eyeball, neonate N01.CNhs11140.1532-43E70.00
eyeball, neonate N02.CNhs11205.1551-44G80.37
eyeball, neonate N16.CNhs11188.777-19A20.26
forelimb, embryo E11.CNhs10596.335-25E20.22
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.44
forelimb, embryo E15.CNhs11007.437-20E70.28
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.41
gonad, embryo E13.CNhs11044.1564-45I60.20
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.26
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.21
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.18
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.20
heart, embryo E16.CNhs11021.457-17C60.31
heart, embryo E17.CNhs11025.479-18E50.93
heart, embryo E18.CNhs11030.1283-20G30.27
heart, neonate N00.CNhs11213.639-21E30.23
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.16
heart, neonate N16.CNhs11209.782-15G10.24
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.22
heart, neonate N30.CNhs11202.1390-42D20.54
hippocampus, adult.CNhs10478.13-16E81.05
hippocampus, neonate N00.CNhs11228.627-43G11.34
intestinal mucosa, adult.CNhs10506.860-29I30.66
intestine, adult.CNhs10496.178-9A31.32
intestine, embryo E12.CNhs11019.1251-16I50.21
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.52
intestine, embryo E16.CNhs10585.463-22H40.20
intestine, embryo E17.CNhs10582.482-18D30.22
intestine, embryo E18.CNhs10526.1289-20F70.19
intestine, neonate N00.CNhs11126.644-26D12.37
intestine, neonate N01.CNhs11192.1322-23E90.66
intestine, neonate N06.CNhs11102.688-20B80.25
intestine, neonate N07.CNhs11095.720-20F20.60
intestine, neonate N10.CNhs11098.755-23A50.97
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E31.73
intestine, neonate N30.CNhs11131.1384-42G10.60
kidney, embryo E14.CNhs10606.411-4I90.38
kidney, embryo E15.CNhs10997.434-16F80.34
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I20.20
kidney, embryo E18.CNhs11001.1288-20C70.19
kidney, neonate N00.CNhs11214.646-21G70.07
kidney, neonate N10.CNhs11206.758-6D50.76
kidney, neonate N20.CNhs11113.832-19I10.30
kidney, neonate N25.CNhs11122.1353-25F30.47
kidney, neonate N30.CNhs11203.1385-42H10.25
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.17
liver, embryo E13.CNhs10524.378-3H60.20
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.20
liver, embryo E16.CNhs10523.462-17F50.96
liver, embryo E17.CNhs10510.481-18A30.25
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.37
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.25
liver, neonate N25.CNhs11198.1368-26H10.36
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.18
lung, embryo E12.CNhs10522.354-16G20.57
lung, embryo E14.CNhs10604.404-26F80.33
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.23
lung, embryo E17.CNhs10605.480-44A60.50
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.20
lung, neonate N06.CNhs11212.683-20E50.32
lung, neonate N07.CNhs11111.715-19A30.66
lung, neonate N10.CNhs11219.750-23E60.32
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.29
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.28
medulla oblongata, adult.CNhs10477.17-12C20.48
medulla oblongata, neonate N30.CNhs11200.1396-42A30.35
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.25
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.32
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.24
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.22
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.28
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.40
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.29
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I90.64
ovary, adult.CNhs10507.91-2I70.14
ovary, embryo E18.CNhs11040.505-44H70.36
ovary, neonate N00.CNhs11217.1299-22I40.00
oviduct, adult pregnant day01.CNhs10500.988-6G60.49
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.24
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.19
pancreas, embryo E17.CNhs10599.1558-45G30.89
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G90.26
pancreas, neonate N01.CNhs11138.1531-43D70.36
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B60.63
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.68
pituitary gland, embryo E12.CNhs11018.346-16E60.18
pituitary gland, embryo E13.CNhs11009.370-44C70.00
pituitary gland, embryo E14.CNhs11037.398-44A50.43
pituitary gland, embryo E15.CNhs10592.427-16B90.00
pituitary gland, embryo E16.CNhs11036.449-43F61.07
pituitary gland, embryo E17.CNhs11039.1265-44F50.00
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.21
prostate, adult.CNhs10470.859-1F80.22
skin, adult.CNhs10492.30-1C30.33
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.48
skin, neonate N06.CNhs11097.693-20I50.36
skin, neonate N10.CNhs11108.762-6C40.33
small intestine, neonate N16.CNhs11114.790-21I11.46
spinal cord, adult.CNhs10505.24-13C91.30
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.41
spleen, embryo E18.CNhs11011.1271-21F20.19
spleen, neonate N10.CNhs11116.752-24D10.38
spleen, neonate N20.CNhs11112.824-19H10.27
spleen, neonate N25.CNhs11099.1354-25G30.46
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.17
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.28
stomach, adult.CNhs10503.33-1H61.91
stomach, embryo E12.CNhs10588.356-43E30.16
stomach, embryo E15.CNhs10603.1252-16G80.20
stomach, embryo E16.CNhs11022.459-17D40.00
stomach, embryo E17.CNhs11006.1035-18D50.21
stomach, embryo E18.CNhs10999.1286-20C60.22
stomach, neonate N03.CNhs11193.1340-24B80.27
stomach, neonate N07.CNhs11210.718-18A90.08
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.52
submandibular gland, adult.CNhs10469.59-29C11.24
testis, adult.CNhs10504.57-7G50.56
testis, embryo E13.CNhs11031.389-23F50.30
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G51.17
testis, embryo E17.CNhs11029.486-18I50.52
testis, embryo E18.CNhs11027.503-18G50.34
testis, neonate N00.CNhs11189.1300-22B70.12
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.21
testis, neonate N20.CNhs11110.839-18H30.48
testis, neonate N30.CNhs11130.1391-42E20.58
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.41
thymus, embryo E15.CNhs11005.430-45I20.21
thymus, embryo E16.CNhs11002.456-26C50.26
thymus, embryo E17.CNhs10581.478-18C10.18
thymus, embryo E18.CNhs10595.1273-19G40.20
thymus, neonate N02.CNhs11181.1541-43F80.60
thymus, neonate N03.CNhs11137.2104-43C70.44
thymus, neonate N06.CNhs11197.681-26C40.50
thymus, neonate N07.CNhs11211.713-19D30.23
thymus, neonate N10.CNhs11194.748-24E40.20
thymus, neonate N20.CNhs11186.820-7A20.19
thymus, neonate N25.CNhs11125.1362-25G70.48
thymus, neonate N30.CNhs11132.1393-42G20.47
tongue, adult.CNhs10499.32-1B40.91
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.67
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.81
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.34
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.56
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.64
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.56
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.92
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.57
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D71.89
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A41.37
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.90
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I80.10
whole body, embryo E12.CNhs10587.857-27C91.20
whole body, embryo E13.CNhs10512.372-23H20.17
whole body, embryo E14.5.CNhs10578.420-27D20.24
whole body, embryo E14.CNhs10519.395-14B10.63
whole body, embryo E16.CNhs10514.453-14F20.55
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.21
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.57
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.32
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.52
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.35
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.15
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.18
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.42
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.55
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.59
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.30
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.62
whole body, embryo E17.5.CNhs10513.490-9F90.00
whole body, embryo E17.CNhs10517.475-3I50.50
whole body, embryo E18.CNhs10516.493-3B30.94
whole body, neonate N00.CNhs10525.657-19C20.43
whole body, neonate N01.CNhs10576.659-23C60.96
whole body, neonate N06.CNhs10515.692-21D10.66
whole body, neonate N10.CNhs10518.761-6B40.00





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)7.47e-1123
neuroblast (sensu Vertebrata)7.47e-1123

Uber anatomy
Ontology termp-valuen
neural tube1.64e-1352
neural rod1.64e-1352
future spinal cord1.64e-1352
neural keel1.64e-1352
regional part of nervous system7.61e-1354
central nervous system2.30e-1273
gray matter3.05e-1234
nervous system7.45e-1275
neurectoderm4.38e-1164
neural plate4.38e-1164
presumptive neural plate4.38e-1164
anterior neural tube1.46e-1040
regional part of brain5.22e-1046
corpus striatum7.79e-105
striatum7.79e-105
ventral part of telencephalon7.79e-105
future corpus striatum7.79e-105
ectoderm-derived structure9.41e-1095
ectoderm9.41e-1095
presumptive ectoderm9.41e-1095
brain1.07e-0947
future brain1.07e-0947
brain grey matter1.31e-0929
regional part of telencephalon1.31e-0929
telencephalon1.31e-0929
regional part of forebrain1.45e-0939
forebrain1.45e-0939
future forebrain1.45e-0939
pre-chordal neural plate5.23e-0949
ecto-epithelium5.39e-0973
basal ganglion1.92e-088
nuclear complex of neuraxis1.92e-088
aggregate regional part of brain1.92e-088
collection of basal ganglia1.92e-088
cerebral subcortex1.92e-088
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