FFCP PHASE1:Mm9::chr15:81791281..81791302,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=29858 | |EntrezGene=29858 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=3011 | |||
|TSSclassifier=NA | |||
|UniProt=Q91W01,O35621,Q545Q8,Q9D6D9 | |UniProt=Q91W01,O35621,Q545Q8,Q9D6D9 | ||
|association_with_transcript=0bp_to_ENSMUST00000071462,NM_013872,uc007wxt.2,uc007wxu.2,uc011zwm.1_5end | |association_with_transcript=0bp_to_ENSMUST00000071462,NM_013872,uc007wxt.2,uc007wxu.2,uc011zwm.1_5end | ||
|cluster_id=chr15:81791281..81791302,- | |||
|description=CAGE_peak_1_at_Pmm1_5end | |description=CAGE_peak_1_at_Pmm1_5end | ||
|id=chr15:81791281..81791302,- | |id=chr15:81791281..81791302,- | ||
|ontology_enrichment_celltype=CL:0000055!8.57e-18!50;CL:0002319!1.73e-16!43;CL:0000221!3.99e-16!44;CL:0000133!3.99e-16!44;CL:0000393!7.56e-14!39;CL:0000211!7.56e-14!39;CL:0000540!1.92e-11!33;CL:0000047!1.92e-11!33;CL:0000031!1.92e-11!33;CL:0000404!1.92e-11!33;CL:0000117!8.75e-10!23;CL:0000337!8.75e-10!23;CL:0002321!2.83e-09!70;CL:0000220!2.83e-09!70 | |ontology_enrichment_celltype=CL:0000055!8.57e-18!50;CL:0002319!1.73e-16!43;CL:0000221!3.99e-16!44;CL:0000133!3.99e-16!44;CL:0000393!7.56e-14!39;CL:0000211!7.56e-14!39;CL:0000540!1.92e-11!33;CL:0000047!1.92e-11!33;CL:0000031!1.92e-11!33;CL:0000404!1.92e-11!33;CL:0000117!8.75e-10!23;CL:0000337!8.75e-10!23;CL:0002321!2.83e-09!70;CL:0000220!2.83e-09!70 | ||
|ontology_enrichment_celltype_v019_2=CL:0002319,1.73e-16,43;CL:0000221,3.99e-16,44;CL:0000133,3.99e-16,44;CL:0000393,7.56e-14,39;CL:0000211,7.56e-14,39;CL:0000540,1.92e-11,33;CL:0000047,1.92e-11,33;CL:0000031,1.92e-11,33;CL:0000404,1.92e-11,33;CL:0000117,8.75e-10,23;CL:0000337,8.75e-10,23;CL:0002321,2.83e-09,70 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!1.36e-28!75;UBERON:0001016!1.36e-28!75;UBERON:0001017!4.21e-28!73;UBERON:0005743!4.21e-28!73;UBERON:0004121!1.27e-26!102;UBERON:0000924!1.27e-26!102;UBERON:0006601!1.27e-26!102;UBERON:0002346!6.72e-21!71;UBERON:0003075!6.72e-21!71;UBERON:0007284!6.72e-21!71;UBERON:0001049!1.45e-19!52;UBERON:0005068!1.45e-19!52;UBERON:0006241!1.45e-19!52;UBERON:0007135!1.45e-19!52;UBERON:0000033!2.18e-19!63;UBERON:0000955!4.33e-19!50;UBERON:0006238!4.33e-19!50;UBERON:0002616!1.37e-18!49;UBERON:0002020!2.25e-16!34;UBERON:0003056!2.32e-14!49;UBERON:0002791!3.60e-14!29;UBERON:0003528!3.60e-14!29;UBERON:0001893!3.60e-14!29;UBERON:0003080!2.37e-13!40;UBERON:0002780!7.62e-13!39;UBERON:0001890!7.62e-13!39;UBERON:0006240!7.62e-13!39;UBERON:0007811!9.47e-13!86;UBERON:0000956!3.16e-11!21;UBERON:0001869!3.16e-11!21;UBERON:0000203!3.16e-11!21;UBERON:0000153!2.97e-10!94;UBERON:0002619!6.00e-10!17;UBERON:0002021!1.99e-07!10;UBERON:0000411!1.99e-07!10;UBERON:0001950!1.99e-07!10;UBERON:0003076!3.64e-07!12;UBERON:0003057!3.64e-07!12 | |ontology_enrichment_uberon=UBERON:0000073!1.36e-28!75;UBERON:0001016!1.36e-28!75;UBERON:0001017!4.21e-28!73;UBERON:0005743!4.21e-28!73;UBERON:0004121!1.27e-26!102;UBERON:0000924!1.27e-26!102;UBERON:0006601!1.27e-26!102;UBERON:0002346!6.72e-21!71;UBERON:0003075!6.72e-21!71;UBERON:0007284!6.72e-21!71;UBERON:0001049!1.45e-19!52;UBERON:0005068!1.45e-19!52;UBERON:0006241!1.45e-19!52;UBERON:0007135!1.45e-19!52;UBERON:0000033!2.18e-19!63;UBERON:0000955!4.33e-19!50;UBERON:0006238!4.33e-19!50;UBERON:0002616!1.37e-18!49;UBERON:0002020!2.25e-16!34;UBERON:0003056!2.32e-14!49;UBERON:0002791!3.60e-14!29;UBERON:0003528!3.60e-14!29;UBERON:0001893!3.60e-14!29;UBERON:0003080!2.37e-13!40;UBERON:0002780!7.62e-13!39;UBERON:0001890!7.62e-13!39;UBERON:0006240!7.62e-13!39;UBERON:0007811!9.47e-13!86;UBERON:0000956!3.16e-11!21;UBERON:0001869!3.16e-11!21;UBERON:0000203!3.16e-11!21;UBERON:0000153!2.97e-10!94;UBERON:0002619!6.00e-10!17;UBERON:0002021!1.99e-07!10;UBERON:0000411!1.99e-07!10;UBERON:0001950!1.99e-07!10;UBERON:0003076!3.64e-07!12;UBERON:0003057!3.64e-07!12 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,1.36e-28,75;UBERON:0001017,4.21e-28,73;UBERON:0004121,1.12e-26,95;UBERON:0000924,1.12e-26,95;UBERON:0006601,1.12e-26,95;UBERON:0002346,2.35e-21,64;UBERON:0003075,2.35e-21,64;UBERON:0007284,2.35e-21,64;UBERON:0000073,5.80e-21,54;UBERON:0001049,1.45e-19,52;UBERON:0005068,1.45e-19,52;UBERON:0006241,1.45e-19,52;UBERON:0007135,1.45e-19,52;UBERON:0010371,1.25e-18,73;UBERON:0000955,3.28e-17,47;UBERON:0006238,3.28e-17,47;UBERON:0002616,1.01e-16,46;UBERON:0002020,2.25e-16,34;UBERON:0003056,2.32e-14,49;UBERON:0003528,3.60e-14,29;UBERON:0002791,3.60e-14,29;UBERON:0001893,3.60e-14,29;UBERON:0010314,5.14e-14,92;UBERON:0003080,2.37e-13,40;UBERON:0002780,7.62e-13,39;UBERON:0001890,7.62e-13,39;UBERON:0006240,7.62e-13,39;UBERON:0000956,3.16e-11,21;UBERON:0001869,3.16e-11,21;UBERON:0000203,3.16e-11,21;UBERON:0002619,6.00e-10,17;UBERON:0002021,1.99e-07,10;UBERON:0000411,1.99e-07,10;UBERON:0001950,1.99e-07,10;UBERON:0003076,3.64e-07,12;UBERON:0003057,3.64e-07,12 | |||
|phase1_expression=20.3389035823088,5.93258192986914,11.3749809847384,5.74682001482977,8.01433167914156,4.70061961353291,7.70921713965235,5.4231795845462,6.335492496825,7.72412936862578,10.9579499664323,12.9230897572445,9.0736386863539,6.11942816932982,38.3076226088012,33.0034685845416,34.2785320282792,11.987562283613,13.9856722277854,14.8536378129311,23.7270779521485,24.1277011418151,15.9331871374751,31.6784997130945,24.0879745120529,5.7423196411502,8.18447792702242,6.89507944594845,7.22088993934221,6.04872311423834,8.64748991555688,69.2183434070998,57.8160900329496,0,12.1317680295535,16.1247605997738,10.0042984568561,9.62622750694888,7.813353445238,8.89990364755457,5.29408339227913,11.6117732442936,5.34061388334269,56.1499808171075,51.2967271970744,42.7663932536718,151.001529459172,158.722313844965,78.4279672362064,69.0226141713706,84.971757926595,119.314628422926,11.4092172119261,14.5072428402269,16.4685961579807,38.3316559693561,64.1834905462815,62.911995257848,31.5613678940973,43.9062512795787,50.7065122804943,159.93461913663,134.283514212782,22.0475430733943,22.7439263390404,31.2611250576284,100.665637134184,123.718294313541,31.8327109787026,43.0668943278093,40.172067618114,82.5531344926992,81.2796230701938,32.7050433903927,39.3924885884951,56.0723459832113,111.217039809383,95.5101288877204,105.988507946808,28.8830970129125,29.5505088835783,25.5247551572812,125.35316655162,124.933299427033,106.34758045266,53.6224025562075,53.6741236612618,41.567076419042,31.274917846605,30.304195602821,3.18850937571846,2.58127163094416,8.15965600449301,3.2382191498269,1.29955283489534,2.24013443548668,13.9039975930434,37.6651012897508,48.8397688653393,42.7540885157512,18.1688011511918,29.5150898052931,22.9324715735981,28.4426681261332,53.6897781707811,45.6047757855177,41.958528936227,11.6467557313441,6.47344709117929,18.5552673831031,22.3796071528315,24.3572382649713,17.5267777914604,22.6083960828934,21.4011446986983,29.4059823711441,16.3148678704687,26.3170829594239,36.2690326299448,12.2942805960031,14.3546986999256,17.9403843660032,35.4144346314432,51.5294202740323,58.6450779077674,6.64188343542338,11.0229914545447,10.7982491578813,11.5633906636489,84.1823393455104,76.4026006707106,46.6177646338727,86.3906871355614,103.053329304123,92.0501037398851,95.3978626838415,26.3763952372319,18.9098595327341,21.9868799837297,53.2417895392779,13.9228873970093,28.9676651586176,24.4884496535275,29.086029842293,26.7383441664718,27.8006773018124,28.8601311643965,60.2778853821907,10.5628316537093,8.13156144721623,10.9089696981648,17.535658594206,17.7950239504383,18.805616992197,20.1666493679785,27.0686602873151,11.937624184325,20.8451804762919,13.3556844715929,8.28503090142008,9.61556845922494,10.2635375032778,11.6004920436753,11.4123254413494,9.56456099901745,10.9290954032692,9.38956904898667,13.778310399326,10.0381508447223,12.6408947340903,13.8627664323413,15.9357986293612,18.0031094538662,18.5204857889313,86.4291688598563,42.9112233621616,26.10308385572,5.02456076660734,11.5175655289026,11.8440702648824,10.4382643670896,7.66397393568702,9.33987784148455,9.70150693174052,10.9141684155238,11.0348299665087,11.8127548136127,12.9321706826748,12.6726656627428,14.3811105384675,15.7780776408527,23.4986702440153,16.6907752838712,14.8523066392647,9.01661885384643,12.6263823264095,16.0980564349129,15.5701520156507,13.9120381673366,16.0895061297766,14.6008816892479,21.7179008502369,1.77871576252289,16.5176654658933,19.8524585064335,20.012728002252,16.4316698324687,18.3294641411837,13.7497959961967,10.9324532231308,11.8358715545776,12.3552635934637,2.87536413054709,4.46569137202204,4.36852742360385,3.78868316920668,2.51156378930677,5.78932225636041,16.4430339248278,19.7071068241304,14.8298128562244,19.0114496068211,17.3670783733492,17.7556632888325,15.7108802984769,13.2690880543303,12.2955412402829,11.7376285513851,15.6265673284337,16.7140581010053,18.8226630233826,18.8043776155965,10.5553898757491,6.52686820582452,13.769399644533,9.65778612066564,102.110175232236,92.7144440944327,32.7869890753351,24.9946217932329,32.4973465998744,37.0916807081807,26.2816545234015,32.021818925642,33.6425997864415,29.1568826712497,28.7415598189175,44.4228904025194,33.994748903401,64.906905917205,20.2974321847824,38.8183015994616,27.3650091714008,20.7862354945395,5.30980553359851,13.110154352369,11.7906187216253,9.24164890803901,12.4026795009925,9.83792473420568,14.9888410037568,8.72480950746013,8.91243445961803,6.95280867458795,4.21674434299995,8.25084345985495,23.8307724027652,14.2248264284735,15.3936833701478,13.0745591369271,15.9606210278046,25.5067409170961,25.834196234533,31.6643547079183,15.7230044402686,33.045803054756,13.0111754852428,20.281009111802,21.1518398971636,16.7066802050992,22.6807453605959,17.5630762727216,9.03590593552537,71.2033159720357,23.238439788508,26.2111322313293,19.0750363190803,26.5599524376614,23.7847956234584,31.1138315560871,11.5585332395822,9.51669875800874,11.0559979043539,18.1387417422872,9.49007980743406,13.2157653632452,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| ||
|short_description=p1@Pmm1 | |short_description=p1@Pmm1 | ||
}} | }} |
Latest revision as of 04:30, 27 September 2015
Short description: | p1@Pmm1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Pmm1_5end |
Coexpression cluster: | MCL_coexpression_mm9:3011 |
Association with transcript: | 0bp_to_ENSMUST00000071462, NM_013872, uc007wxt.2, uc007wxu.2, uc011zwm.1_5end |
EntrezGene: | Pmm1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 1.73e-16 | 43 |
ectodermal cell | 3.99e-16 | 44 |
neurectodermal cell | 3.99e-16 | 44 |
electrically responsive cell | 7.56e-14 | 39 |
electrically active cell | 7.56e-14 | 39 |
neuron | 1.92e-11 | 33 |
neuronal stem cell | 1.92e-11 | 33 |
neuroblast | 1.92e-11 | 33 |
electrically signaling cell | 1.92e-11 | 33 |
CNS neuron (sensu Vertebrata) | 8.75e-10 | 23 |
neuroblast (sensu Vertebrata) | 8.75e-10 | 23 |
embryonic cell | 2.83e-09 | 70 |