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FFCP PHASE1:Mm9::chr1:52065508..52065522,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=20849
|EntrezGene=20849
|HGNC=
|HGNC=
|MCL_coexpression_id=2312
|TSSclassifier=NA
|UniProt=Q3V157,P42228
|UniProt=Q3V157,P42228
|association_with_transcript=420bp_to_ENSMUST00000027277,NM_011487,uc007axw.1,uc007axx.1_5end
|association_with_transcript=420bp_to_ENSMUST00000027277,NM_011487,uc007axw.1,uc007axx.1_5end
|cluster_id=chr1:52065508..52065522,+
|description=CAGE_peak_2_at_Stat4_5end
|description=CAGE_peak_2_at_Stat4_5end
|id=chr1:52065508..52065522,+
|id=chr1:52065508..52065522,+
|ontology_enrichment_celltype=CL:0000791!1.11e-07!9;CL:0000789!1.11e-07!9;CL:0002420!1.11e-07!9;CL:0002419!1.11e-07!9;CL:0000790!1.11e-07!9;CL:0000624!6.31e-07!8
|ontology_enrichment_celltype=CL:0000791!1.11e-07!9;CL:0000789!1.11e-07!9;CL:0002420!1.11e-07!9;CL:0002419!1.11e-07!9;CL:0000790!1.11e-07!9;CL:0000624!6.31e-07!8
|ontology_enrichment_celltype_v019_2=CL:0000988,3.22e-12,32;CL:0002032,3.22e-12,32;CL:0000037,3.22e-12,32;CL:0000837,3.22e-12,32;CL:0000791,4.32e-11,9;CL:0000789,4.32e-11,9;CL:0002420,4.32e-11,9;CL:0002419,4.32e-11,9;CL:0000790,4.32e-11,9;CL:0000624,6.43e-10,8;CL:0000838,1.29e-09,12;CL:0002031,5.06e-09,25;CL:0000542,1.28e-08,13;CL:0000051,1.28e-08,13;CL:0000084,1.55e-08,11;CL:0000827,1.55e-08,11;CL:0000893,1.11e-07,6;CL:0002489,1.11e-07,6;CL:0000898,1.11e-07,6;CL:0000809,1.11e-07,6;CL:0000810,1.11e-07,6;CL:0000895,1.11e-07,6;CL:0000808,1.11e-07,6;CL:0000894,1.11e-07,6;CL:0000806,1.11e-07,6;CL:0000807,1.11e-07,6;CL:0000805,1.11e-07,6;CL:0002425,1.11e-07,6;CL:0002436,1.11e-07,6;CL:0002427,1.11e-07,6;CL:0002428,1.11e-07,6;CL:0002429,1.11e-07,6;CL:0002433,1.11e-07,6;CL:0002431,1.11e-07,6;CL:0002432,1.11e-07,6;CL:0002320,4.88e-07,46;CL:0000134,4.88e-07,46
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002405!2.73e-13!70;UBERON:0002193!1.09e-12!48;UBERON:0004177!2.98e-12!29;UBERON:0005057!9.00e-12!51;UBERON:0004119!1.88e-11!130;UBERON:0000925!1.88e-11!130;UBERON:0006595!1.88e-11!130;UBERON:0001007!2.13e-11!128;UBERON:0001555!2.13e-11!128;UBERON:0007026!2.13e-11!128;UBERON:0000077!2.28e-11!97;UBERON:0002390!2.97e-11!45;UBERON:0003061!2.97e-11!45;UBERON:0001041!6.92e-11!92;UBERON:0004921!1.04e-10!126;UBERON:0004185!1.04e-10!126;UBERON:0003408!8.32e-10!24;UBERON:0002370!1.99e-09!23;UBERON:0000974!1.99e-09!23;UBERON:0004807!1.99e-09!23;UBERON:0005058!1.99e-09!23;UBERON:0003351!1.99e-09!23;UBERON:0009113!1.99e-09!23;UBERON:0003295!1.99e-09!23;UBERON:0009722!1.99e-09!23;UBERON:0005562!1.99e-09!23;UBERON:0007690!1.99e-09!23;UBERON:0006562!3.02e-09!24;UBERON:0001557!3.02e-09!24;UBERON:0001042!3.02e-09!24;UBERON:0008814!3.02e-09!24;UBERON:0009145!3.02e-09!24;UBERON:0003104!5.25e-09!131;UBERON:0009142!5.25e-09!131;UBERON:0000949!8.78e-09!72;UBERON:0000926!1.11e-08!193;UBERON:0004120!1.11e-08!193;UBERON:0006603!1.11e-08!193;UBERON:0002530!2.22e-08!65;UBERON:0001004!9.20e-08!42;UBERON:0002368!1.27e-07!60;UBERON:0000065!2.02e-07!41;UBERON:0000072!4.70e-07!27
|ontology_enrichment_uberon=UBERON:0002405!2.73e-13!70;UBERON:0002193!1.09e-12!48;UBERON:0004177!2.98e-12!29;UBERON:0005057!9.00e-12!51;UBERON:0004119!1.88e-11!130;UBERON:0000925!1.88e-11!130;UBERON:0006595!1.88e-11!130;UBERON:0001007!2.13e-11!128;UBERON:0001555!2.13e-11!128;UBERON:0007026!2.13e-11!128;UBERON:0000077!2.28e-11!97;UBERON:0002390!2.97e-11!45;UBERON:0003061!2.97e-11!45;UBERON:0001041!6.92e-11!92;UBERON:0004921!1.04e-10!126;UBERON:0004185!1.04e-10!126;UBERON:0003408!8.32e-10!24;UBERON:0002370!1.99e-09!23;UBERON:0000974!1.99e-09!23;UBERON:0004807!1.99e-09!23;UBERON:0005058!1.99e-09!23;UBERON:0003351!1.99e-09!23;UBERON:0009113!1.99e-09!23;UBERON:0003295!1.99e-09!23;UBERON:0009722!1.99e-09!23;UBERON:0005562!1.99e-09!23;UBERON:0007690!1.99e-09!23;UBERON:0006562!3.02e-09!24;UBERON:0001557!3.02e-09!24;UBERON:0001042!3.02e-09!24;UBERON:0008814!3.02e-09!24;UBERON:0009145!3.02e-09!24;UBERON:0003104!5.25e-09!131;UBERON:0009142!5.25e-09!131;UBERON:0000949!8.78e-09!72;UBERON:0000926!1.11e-08!193;UBERON:0004120!1.11e-08!193;UBERON:0006603!1.11e-08!193;UBERON:0002530!2.22e-08!65;UBERON:0001004!9.20e-08!42;UBERON:0002368!1.27e-07!60;UBERON:0000065!2.02e-07!41;UBERON:0000072!4.70e-07!27
|ontology_enrichment_uberon_v019_2=UBERON:0002193,3.21e-23,48;UBERON:0002405,3.21e-23,48;UBERON:0002390,7.81e-21,45;UBERON:0003061,7.81e-21,45;UBERON:0004177,9.73e-20,29;UBERON:0005057,9.73e-20,29;UBERON:0003408,7.04e-16,24;UBERON:0002370,2.76e-15,23;UBERON:0000974,2.76e-15,23;UBERON:0004807,2.76e-15,23;UBERON:0005058,2.76e-15,23;UBERON:0003351,2.76e-15,23;UBERON:0009113,2.76e-15,23;UBERON:0003295,2.76e-15,23;UBERON:0009722,2.76e-15,23;UBERON:0005562,2.76e-15,23;UBERON:0007690,2.76e-15,23;UBERON:0000077,8.68e-15,35;UBERON:0006562,2.35e-14,24;UBERON:0001557,2.35e-14,24;UBERON:0001042,2.35e-14,24;UBERON:0008814,2.35e-14,24;UBERON:0009145,2.35e-14,24;UBERON:0001004,3.03e-12,42;UBERON:0000072,5.38e-12,27;UBERON:0000065,1.06e-11,41;UBERON:0001041,7.95e-10,80;UBERON:0001007,2.03e-08,116;UBERON:0001555,2.03e-08,116;UBERON:0007026,2.03e-08,116;UBERON:0007811,2.83e-08,36;UBERON:0004119,4.76e-08,118;UBERON:0000925,4.76e-08,118;UBERON:0006595,4.76e-08,118;UBERON:0003081,6.30e-08,87;UBERON:0004921,1.15e-07,114;UBERON:0002384,4.88e-07,46;UBERON:0005911,5.28e-07,69
|phase1_expression=0.160148847104794,0,0,0,0,0,0,52.5531926407215,78.4193182384784,89.6467135813235,12.4989116804619,11.4074187363331,35.780952555622,35.9297853942079,3.66420737997229,9.31386229993199,2.09868563438444,35.80495576816,40.4487579136929,47.1072513495814,1.27564935226605,0,0,3.99981056983517,1.60586496747019,0.57423196411502,0,0,0.760093677825496,1.51218077855958,1.55211357458713,0,0,0,0,0.166234645358492,0,34.7381253511633,17.1893775795236,25.6526634547161,47.6467505305122,49.8623204019665,46.6089938909907,0,0,0,0,0,0,0,0,0,67.1130424230945,54.4021606508508,91.7536071658927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.420649922702764,0,0,0,0,0,0,0.127687338085188,0,0,0,0,0,0,0,0,0,0,2.12033341332915,0,0.579728977403356,1.72084775396277,0,0,0,0,1.40444420131752,0,0,0,0,0,0,0,0,0,0,1.59857431606684,107.718159597223,2.3750742250372,0,0,0.691846491768175,0.301445281105245,0.23517741427141,0.125666591329675,0.247194967734374,2.60278842455841,7.07688441559899,0.485300549842228,2.42925670306433,0.969750506270444,1.86391761218122,0.292780797011547,0,3.83185582812887,12.9400334466394,4.79922184794726,5.84523044536098,0.149790639404823,0,0,0,0.511430914660661,0,0,0.101839363850316,3.11017426525233,0.758168275301024,0.631325567659422,0,0,0,0,0.0680364991513279,0,0,0,0,0,0.175951124163949,0,0,0,0.205782136407943,0.398068533636986,2.1066395619397,3.3455227924913,1.98914449576915,0.207125772535502,0.703578179943289,0.180062061461015,0,0.590292695242212,0,0,0,0.350296027101508,0,0.164167464079095,0.324275238183423,0.146199987425332,0.219550115291051,0.268412837520744,0,0,7.93005079161115,0.793351699990633,0,0,0.128867461322093,0.605050573870028,0.22237804384487,0,1.89811624617805,0.164698954724011,1.00534083520108,1.1937388322469,0.974820435595601,0,0.648414149624083,0.995706366271836,0,0,0,0,0.387904974335251,0.140271639780637,0.189709611372772,0,0,0.123397163921801,0.592905254174298,0.83422552858047,0.393117990226406,0,0.608580364165509,0.482354319504834,0.763877555344259,1.43848068725405,0.810676133875177,0.274561413188081,5.75072826109418,3.72140947668503,2.18426371180192,1.01031551178845,0.717589654087649,0.482443521363367,11.0851914099963,0,0,0.339490171550376,0.234690248288502,0.167506257441816,0,0.195133647857799,1.10344600874334,1.10732344824387,1.59454768657487,3.60499292374624,3.9717545829156,2.31438493730419,0,0,2.95058563811422,2.20749397043786,0,0,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,1.13552068166615,0.35613120733451,0,1.48473110675282,2.65490276679926,1.45668381692989,0,0.188605079755898,0.295301892880773,0.922305443831782,0.775284879504663,0.727067458955011,1.06949213515416,2.52829406348653,0,2.06271086496374,0.680879211507576,0.36012218806262,0.388076051348264,0.214337035031592,0.177340233642274,0.178368817602071,0,0,0.23467170806371,0.21183207086382,0.882113592219848,0,0.161464426695906,0.241251699712623,0.119372344003136,0.164140899745061,1.1659233465194,0.370850604021019,11.9609616558497,1.23832120777933,3.51869602002452,4.70921142511728,7.92826520781946,7.32090154260872,43.8544349384147,32.748639843736,45.0531914602422,0,0,0.203319467126849,0,0.418176592028937,0,0,0.661227645802687,0.785267825952089,1.03691978633434,2.4853572523477,0.56369293868419,0,0,0,0.129159823477731,0.506868376472335,0,0.2604087696879,0.209718688851422,0,0,5.68820017130721,7.70355818102624,14.5849559174055,11.8227948909793,5.19177417435696,6.75516606256301,4.68762253127878,4.72606486958647,5.65412119709627,3.65792671943999,3.93222122033678,4.87289403698762,5.96513418170043,7.94762934834669,0.226730383615211,0,0,0,0.386379188064381,0.750729901804728,1.64836461840539,0.643105137237198,0,0,0,0,0,0,0,0,0.45032120322422,0.453142408984205,0,0.103787347584177,0,0.341467211508268,0,0,0.367687016900028,0.222246727801615,0.206035057238894,0,0,0,0.188626341386076,0,0.0640251524048693,0.114870937911227,0.476293691283074,0,0.192909220463705,0.412085900803307,0.147198920134397,0,0,0,0,0.376437521661322,0.0846146078916765,0.182927972872773,0,0.543216455383447,0,0.237270036248348,0,0,0.309873682371932,0.192906610981141,0,0,0.644613162144895,0.191288332068843,0.441182838239031,1.39120701372253
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|short_description=p2@Stat4
|short_description=p2@Stat4
}}
}}

Latest revision as of 04:57, 27 September 2015

Short description:p2@Stat4
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Stat4_5end
Coexpression cluster:MCL_coexpression_mm9:2312
Association with transcript: 420bp_to_ENSMUST00000027277, NM_011487, uc007axw.1, uc007axx.1_5end
EntrezGene:Stat4
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Stat4

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.16
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E952.55
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E778.42
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F289.65
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E612.50
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F111.41
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E435.78
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E835.93
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A13.66
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A39.31
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A52.10
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A235.80
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A440.45
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A647.11
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.28
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D14.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D21.61
GP2+ M cell, pool1.CNhs13228.11845-124H90.57
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.76
Ileum epithelium, pool2.CNhs13232.10253-104C11.51
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C81.55
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.17
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G834.74
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H117.19
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H325.65
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G947.65
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H249.86
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H446.61
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A267.11
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I954.40
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A191.75
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.00
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.42
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.00
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.00
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.13
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.00
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.00
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.00
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.00
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.00
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.00
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.00
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.00
Mouse Schwann, donor1.CNhs12507.11728-123D92.12
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.58
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F71.72
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A71.40
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.00
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B61.60
accessory axillary lymph node, adult.CNhs10475.1063-29H9107.72
adrenal gland, adult.CNhs10508.49-24D72.38
adrenal gland, embryo E14.CNhs11038.406-44C50.00
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.69
adrenal gland, embryo E18.CNhs11026.1262-18F50.30
adrenal gland, neonate N00.CNhs11191.1311-23C10.24
adrenal gland, neonate N25.CNhs11223.1377-27I30.13
amnion, adult pregnant day17.5.CNhs10488.583-22A80.25
aorta, adult.CNhs10498.46-23H12.60
bone (os femoris), adult.CNhs10483.56-12G27.08
bone (os femoris), neonate N02.CNhs11227.1985-43F50.49
bone (os femoris), neonate N16.CNhs11225.1525-43A62.43
bone (os femoris), neonate N20.CNhs11195.1350-25C30.97
cecum, adult.CNhs10467.37-13H41.86
cerebellum, adult.CNhs10494.15-8B20.29
cerebellum, neonate N30.CNhs11135.1395-42I20.00
colon, adult.CNhs10468.36-18H73.83
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C712.94
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D14.80
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D45.85
corpora quadrigemina, adult.CNhs10501.16-22A40.15
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F10.00
cortex, adult.CNhs10473.12-14D50.00
cortex, neonate N30.CNhs11107.1392-42F20.51
diencephalon, adult.CNhs10482.20-12F20.00
diencephalon, neonate N30.CNhs11201.1388-42B20.00
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.10
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A23.11
epididymis, adult.CNhs10490.58-23B20.76
eyeball, adult.CNhs10484.31-12G40.63
eyeball, embryo E12.CNhs11016.345-16C60.00
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.00
eyeball, embryo E17.CNhs11023.1261-18D40.00
eyeball, neonate N00.CNhs11207.633-15C60.07
eyeball, neonate N01.CNhs11140.1532-43E70.00
eyeball, neonate N02.CNhs11205.1551-44G80.00
eyeball, neonate N16.CNhs11188.777-19A20.00
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.18
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.21
gonad, embryo E13.CNhs11044.1564-45I60.40
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C82.11
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D23.35
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D51.99
heart, embryo E11.CNhs10586.331-24E90.21
heart, embryo E12.CNhs11015.353-12F50.70
heart, embryo E13.CNhs11013.376-3I90.18
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.59
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.35
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.16
heart, neonate N16.CNhs11209.782-15G10.32
heart, neonate N20.CNhs11127.821-26I60.15
heart, neonate N25.CNhs11196.1351-25D30.22
heart, neonate N30.CNhs11202.1390-42D20.27
hippocampus, adult.CNhs10478.13-16E80.00
hippocampus, neonate N00.CNhs11228.627-43G10.00
intestinal mucosa, adult.CNhs10506.860-29I37.93
intestine, adult.CNhs10496.178-9A30.79
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.13
intestine, embryo E16.CNhs10585.463-22H40.61
intestine, embryo E17.CNhs10582.482-18D30.22
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D11.90
intestine, neonate N01.CNhs11192.1322-23E90.16
intestine, neonate N06.CNhs11102.688-20B81.01
intestine, neonate N07.CNhs11095.720-20F21.19
intestine, neonate N10.CNhs11098.755-23A50.97
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.65
intestine, neonate N30.CNhs11131.1384-42G11.00
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.00
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.39
kidney, neonate N00.CNhs11214.646-21G70.14
kidney, neonate N10.CNhs11206.758-6D50.19
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.12
liver, adult pregnant day01.CNhs10466.508-5B20.59
liver, embryo E12.CNhs10601.355-15F80.83
liver, embryo E13.CNhs10524.378-3H60.39
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.61
liver, embryo E16.CNhs10523.462-17F50.48
liver, embryo E17.CNhs10510.481-18A30.76
liver, embryo E18.CNhs10579.499-43G41.44
liver, neonate N00.CNhs11117.641-24F40.81
liver, neonate N03.CNhs11123.1345-25G20.27
liver, neonate N06.CNhs11101.684-20A85.75
liver, neonate N07.CNhs11103.716-20H23.72
liver, neonate N10.CNhs11115.751-24B92.18
liver, neonate N20.CNhs11220.823-25A31.01
liver, neonate N25.CNhs11198.1368-26H10.72
liver, neonate N30.CNhs11106.1382-42D10.48
lung, adult.CNhs10474.28-22B111.09
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.34
lung, embryo E16.CNhs10998.458-17B60.23
lung, embryo E17.CNhs10605.480-44A60.17
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.20
lung, neonate N06.CNhs11212.683-20E51.10
lung, neonate N07.CNhs11111.715-19A31.11
lung, neonate N10.CNhs11219.750-23E61.59
lung, neonate N20.CNhs11109.822-18A43.60
lung, neonate N25.CNhs11119.1359-25C73.97
lung, neonate N30.CNhs11133.1394-42H22.31
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B62.95
mammary gland, adult pregnant day19.CNhs10476.588-5H22.21
medulla oblongata, adult.CNhs10477.17-12C20.00
medulla oblongata, neonate N30.CNhs11200.1396-42A30.00
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.25
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I90.00
ovary, adult.CNhs10507.91-2I71.14
ovary, embryo E18.CNhs11040.505-44H70.36
ovary, neonate N00.CNhs11217.1299-22I40.00
oviduct, adult pregnant day01.CNhs10500.988-6G61.48
pancreas, adult.CNhs10486.34-16E42.65
pancreas, embryo E14.CNhs11012.405-44F41.46
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.19
pancreas, embryo E17.CNhs10599.1558-45G30.30
pancreas, embryo E18.CNhs10580.1535-43I70.92
pancreas, neonate N00.CNhs11105.645-26G90.78
pancreas, neonate N01.CNhs11138.1531-43D70.73
pancreas, neonate N02.CNhs11139.1539-43D81.07
pancreas, neonate N16.CNhs11136.787-43B62.53
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H52.06
pituitary gland, adult.CNhs10493.21-1G80.68
pituitary gland, embryo E12.CNhs11018.346-16E60.36
pituitary gland, embryo E13.CNhs11009.370-44C70.39
pituitary gland, embryo E14.CNhs11037.398-44A50.21
pituitary gland, embryo E15.CNhs10592.427-16B90.18
pituitary gland, embryo E16.CNhs11036.449-43F60.18
pituitary gland, embryo E17.CNhs11039.1265-44F50.00
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I70.23
placenta, adult pregnant day17.CNhs10464.577-18G30.21
prostate, adult.CNhs10470.859-1F80.88
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.16
skin, neonate N03.CNhs11215.662-22H30.24
skin, neonate N06.CNhs11097.693-20I50.12
skin, neonate N10.CNhs11108.762-6C40.16
small intestine, neonate N16.CNhs11114.790-21I11.17
spinal cord, adult.CNhs10505.24-13C90.37
spleen, adult.CNhs10465.25-2G211.96
spleen, embryo E16.CNhs11035.461-43C11.24
spleen, embryo E18.CNhs11011.1271-21F23.52
spleen, neonate N10.CNhs11116.752-24D14.71
spleen, neonate N20.CNhs11112.824-19H17.93
spleen, neonate N25.CNhs11099.1354-25G37.32
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C643.85
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C932.75
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D345.05
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.20
stomach, embryo E16.CNhs11022.459-17D40.00
stomach, embryo E17.CNhs11006.1035-18D50.42
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.00
stomach, neonate N07.CNhs11210.718-18A90.66
stomach, neonate N25.CNhs11104.1355-25E40.79
stomach, neonate N30.CNhs11134.1386-42I11.04
submandibular gland, adult.CNhs10469.59-29C12.49
testis, adult.CNhs10504.57-7G50.56
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.13
testis, embryo E18.CNhs11027.503-18G50.51
testis, neonate N00.CNhs11189.1300-22B70.00
testis, neonate N07.CNhs11222.726-26I40.26
testis, neonate N10.CNhs11204.763-44D90.21
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B55.69
thymus, embryo E14.CNhs11041.402-44I47.70
thymus, embryo E15.CNhs11005.430-45I214.58
thymus, embryo E16.CNhs11002.456-26C511.82
thymus, embryo E17.CNhs10581.478-18C15.19
thymus, embryo E18.CNhs10595.1273-19G46.76
thymus, neonate N02.CNhs11181.1541-43F84.69
thymus, neonate N03.CNhs11137.2104-43C74.73
thymus, neonate N06.CNhs11197.681-26C45.65
thymus, neonate N07.CNhs11211.713-19D33.66
thymus, neonate N10.CNhs11194.748-24E43.93
thymus, neonate N20.CNhs11186.820-7A24.87
thymus, neonate N25.CNhs11125.1362-25G75.97
thymus, neonate N30.CNhs11132.1393-42G27.95
tongue, adult.CNhs10499.32-1B40.23
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.39
uterus, adult pregnant day19.CNhs10497.590-15F50.75
uterus, adult.CNhs10509.92-27E51.65
vagina, adult.CNhs10502.89-27D50.64
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.00
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.45
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.45
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I80.10
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.34
whole body, embryo E14.5.CNhs10578.420-27D20.00
whole body, embryo E14.CNhs10519.395-14B10.00
whole body, embryo E16.CNhs10514.453-14F20.37
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.21
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.06
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.11
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.15
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.38
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.08
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.18
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.54
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.24
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.31
whole body, embryo E17.5.CNhs10513.490-9F90.19
whole body, embryo E17.CNhs10517.475-3I50.00
whole body, embryo E18.CNhs10516.493-3B30.00
whole body, neonate N00.CNhs10525.657-19C20.64
whole body, neonate N01.CNhs10576.659-23C60.19
whole body, neonate N06.CNhs10515.692-21D10.44
whole body, neonate N10.CNhs10518.761-6B41.39





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
hematopoietic cell3.22e-1232
hematopoietic oligopotent progenitor cell3.22e-1232
hematopoietic stem cell3.22e-1232
hematopoietic multipotent progenitor cell3.22e-1232
mature alpha-beta T cell4.32e-119
alpha-beta T cell4.32e-119
immature T cell4.32e-119
mature T cell4.32e-119
immature alpha-beta T cell4.32e-119
CD4-positive, alpha-beta T cell6.43e-108
lymphoid lineage restricted progenitor cell1.29e-0912
hematopoietic lineage restricted progenitor cell5.06e-0925
lymphocyte1.28e-0813
common lymphoid progenitor1.28e-0813
T cell1.55e-0811
pro-T cell1.55e-0811
thymocyte1.11e-076
double negative thymocyte1.11e-076
naive T cell1.11e-076
double-positive, alpha-beta thymocyte1.11e-076
CD4-positive, alpha-beta thymocyte1.11e-076
naive thymus-derived CD4-positive, alpha-beta T cell1.11e-076
DN4 thymocyte1.11e-076
DN1 thymic pro-T cell1.11e-076
DN2 thymocyte1.11e-076
DN3 thymocyte1.11e-076
immature single positive thymocyte1.11e-076
early T lineage precursor1.11e-076
mature CD4 single-positive thymocyte1.11e-076
resting double-positive thymocyte1.11e-076
double-positive blast1.11e-076
CD69-positive double-positive thymocyte1.11e-076
CD69-positive, CD4-positive single-positive thymocyte1.11e-076
CD4-positive, CD8-intermediate double-positive thymocyte1.11e-076
CD24-positive, CD4 single-positive thymocyte1.11e-076
connective tissue cell4.88e-0746
mesenchymal cell4.88e-0746

Uber anatomy
Ontology termp-valuen
hemolymphoid system3.21e-2348
immune system3.21e-2348
hematopoietic system7.81e-2145
blood island7.81e-2145
hemopoietic organ9.73e-2029
immune organ9.73e-2029
gland of gut7.04e-1624
thymus2.76e-1523
neck2.76e-1523
respiratory system epithelium2.76e-1523
hemolymphoid system gland2.76e-1523
pharyngeal epithelium2.76e-1523
thymic region2.76e-1523
pharyngeal gland2.76e-1523
entire pharyngeal arch endoderm2.76e-1523
thymus primordium2.76e-1523
early pharyngeal endoderm2.76e-1523
mixed endoderm/mesoderm-derived structure8.68e-1535
pharynx2.35e-1424
upper respiratory tract2.35e-1424
chordate pharynx2.35e-1424
pharyngeal arch system2.35e-1424
pharyngeal region of foregut2.35e-1424
respiratory system3.03e-1242
segment of respiratory tract5.38e-1227
respiratory tract1.06e-1141
foregut7.95e-1080
digestive system2.03e-08116
digestive tract2.03e-08116
primitive gut2.03e-08116
craniocervical region2.83e-0836
endoderm-derived structure4.76e-08118
endoderm4.76e-08118
presumptive endoderm4.76e-08118
lateral plate mesoderm6.30e-0887
subdivision of digestive tract1.15e-07114
connective tissue4.88e-0746
endo-epithelium5.28e-0769
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