FFCP PHASE1:Mm9::chr18:37906625..37906677,+: Difference between revisions
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{{FFCP|EntrezGene=93722|HGNC=|MCL_coexpression_id=108|UniProt=Q91XY9|association_with_transcript=-164bp_to_NM_033593,uc008eqz.1_5end|description=CAGE_peak_1_at_Pcdhga10_5end|id=chr18:37906625..37906677,+|ontology_enrichment_celltype=CL:0000221!2.27e-11!44;CL:0000133!2.27e-11!44;CL:0002319!4.04e-11!43;CL:0000117!2.08e-10!23;CL:0000337!2.08e-10!23;CL:0000540!1.94e-08!33;CL:0000047!1.94e-08!33;CL:0000031!1.94e-08!33;CL:0000404!1.94e-08!33;CL:0000055!7.58e-08!50|ontology_enrichment_celltype_v019_2=CL:0000221,5.24e-12,44;CL:0000133,5.24e-12,44;CL:0002319,9.57e-12,43;CL:0000117,9.07e-11,23;CL:0000337,9.07e-11,23;CL:0000540,8.71e-09,33;CL:0000047,8.71e-09,33;CL:0000031,8.71e-09,33;CL:0000404,8.71e-09,33|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004121!1.77e-26!102;UBERON:0000924!1.77e-26!102;UBERON:0006601!1.77e-26!102;UBERON:0000073!1.70e-25!75;UBERON:0001016!1.70e-25!75;UBERON:0001017!2.39e-25!73;UBERON:0005743!2.39e-25!73;UBERON:0002346!6.47e-24!71;UBERON:0003075!6.47e-24!71;UBERON:0007284!6.47e-24!71;UBERON:0001049!1.91e-23!52;UBERON:0005068!1.91e-23!52;UBERON:0006241!1.91e-23!52;UBERON:0007135!1.91e-23!52;UBERON:0000033!1.35e-22!63;UBERON:0000955!4.21e-21!50;UBERON:0006238!4.21e-21!50;UBERON:0002616!1.91e-20!49;UBERON:0003056!2.20e-17!49;UBERON:0003080!2.12e-16!40;UBERON:0002780!8.40e-16!39;UBERON:0001890!8.40e-16!39;UBERON:0006240!8.40e-16!39;UBERON:0002020!2.44e-15!34;UBERON:0000025!1.11e-13!114;UBERON:0004111!1.57e-13!122;UBERON:0002791!2.30e-12!29;UBERON:0003528!2.30e-12!29;UBERON:0001893!2.30e-12!29;UBERON:0000153!8.13e-12!94;UBERON:0007811!5.87e-11!86;UBERON:0000956!3.00e-09!21;UBERON:0001869!3.00e-09!21;UBERON:0000203!3.00e-09!21;UBERON:0000468!5.27e-09!333;UBERON:0002619!4.86e-08!17;UBERON:0003076!9.10e-08!12;UBERON:0003057!9.10e-08!12|ontology_enrichment_uberon_v019_2=UBERON:0010314,4.50e-29,92;UBERON:0004121,3.75e-27,95;UBERON:0000924,3.75e-27,95;UBERON:0006601,3.75e-27,95;UBERON:0001016,9.05e-27,75;UBERON:0001017,1.28e-26,73;UBERON:0002346,9.87e-25,64;UBERON:0003075,9.87e-25,64;UBERON:0007284,9.87e-25,64;UBERON:0000073,1.37e-24,54;UBERON:0001049,2.42e-24,52;UBERON:0005068,2.42e-24,52;UBERON:0006241,2.42e-24,52;UBERON:0007135,2.42e-24,52;UBERON:0010371,1.02e-23,73;UBERON:0000955,2.75e-21,47;UBERON:0006238,2.75e-21,47;UBERON:0002616,1.32e-20,46;UBERON:0003056,4.95e-18,49;UBERON:0003080,5.25e-17,40;UBERON:0002780,2.20e-16,39;UBERON:0001890,2.20e-16,39;UBERON:0006240,2.20e-16,39;UBERON:0002020,6.68e-16,34;UBERON:0000025,9.88e-15,114;UBERON:0004111,4.38e-14,122;UBERON:0003528,8.33e-13,29;UBERON:0002791,8.33e-13,29;UBERON:0001893,8.33e-13,29;UBERON:0000956,1.45e-09,21;UBERON:0001869,1.45e-09,21;UBERON:0000203,1.45e-09,21;UBERON:0002619,2.64e-08,17;UBERON:0003076,5.07e-08,12;UBERON:0003057,5.07e-08,12|phase1_expression=4.00372117761985,0.348975407639361,0,0.30246421130683,0,0,0,0,0,0.234064526321993,0.171217968225505,0.239316476986009,0,0.174840804837995,0.333109761815663,0,0,0.157731082679119,0.137114433605739,0.42438965179803,2.46625541438102,0,0,0.159992422793407,0,0,0,0.215471232685889,0,0.504060259519861,0.221730510655305,0,0,0,0.288851619751275,0.166234645358492,0,0,0,0,0,0,0,0.251793635951155,0.101376931219515,0.183546752161682,5.47673941043627,6.1047043786525,7.24964403023757,4.6663175777828,4.89952475688769,0,0.167782606057736,0,0,1.80081605225163,0.573066879877513,1.54701627683233,8.9019242778223,8.99284664762456,7.60597684207415,5.08266798103698,4.4464739805557,0.899899717281399,0,0.7104801149461,3.89480143673926,6.91592949578798,3.94020526772215,3.91517221161903,2.3135745748652,7.9982275633065,10.1599528837742,3.67472397644862,5.17565543498476,3.67687514644008,2.20231761998777,3.06449611404451,3.84016333140609,10.0233578674947,8.14240028061446,8.85552729946492,2.79182999001381,1.68828783009504,3.36156145108982,7.95497180778903,6.97621235915604,3.54158947068071,2.12033341332915,2.64500460373749,2.89864488701678,0,0,0,0,0,1.40444420131752,0,0,0,3.09855523508697,0,0,0,1.5154372870785,3.04031838570118,1.01104889002957,0.68510327831436,2.07150306917737,4.45326417194474,2.77576522825817,2.43572382649713,2.53677046981664,1.05505848386836,1.29347577849275,3.01599819191221,2.22475470960936,3.18118585223806,1.76922110389975,2.10296904931632,1.10420759230197,1.45462575940567,0,10.2473278954042,5.86450779077674,0.766371165625774,0.239630249011841,0,0,5.54225365797844,5.03250663100489,5.6544458450789,5.04090528557602,5.11430914660661,4.36354893575076,4.05603157669394,2.64782346010822,0.622034853050465,2.52722758433675,2.94618598241064,2.08192708740326,1.60931473103431,1.98068342785884,2.41127708537144,3.12967896096108,2.94661556655154,3.65436725782942,4.13925393182425,0.646703978798527,2.08016688184601,2.46331573829528,3.28793598641362,2.22437799380478,3.48252166522167,3.49829631893504,1.19420560091096,0,0.257347907114715,0,4.34964122324554,1.40715635988658,2.70093092191522,4.02466050494857,2.55793501271625,2.77680803197281,2.55787339225449,3.487554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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=93722 | |||
|HGNC= | |||
|MCL_coexpression_id=108 | |||
|TSSclassifier=NA | |||
|UniProt=Q91XY9 | |||
|association_with_transcript=-164bp_to_NM_033593,uc008eqz.1_5end | |||
|cluster_id=chr18:37906625..37906677,+ | |||
|description=CAGE_peak_1_at_Pcdhga10_5end | |||
|id=chr18:37906625..37906677,+ | |||
|ontology_enrichment_celltype=CL:0000221!2.27e-11!44;CL:0000133!2.27e-11!44;CL:0002319!4.04e-11!43;CL:0000117!2.08e-10!23;CL:0000337!2.08e-10!23;CL:0000540!1.94e-08!33;CL:0000047!1.94e-08!33;CL:0000031!1.94e-08!33;CL:0000404!1.94e-08!33;CL:0000055!7.58e-08!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000221,5.24e-12,44;CL:0000133,5.24e-12,44;CL:0002319,9.57e-12,43;CL:0000117,9.07e-11,23;CL:0000337,9.07e-11,23;CL:0000540,8.71e-09,33;CL:0000047,8.71e-09,33;CL:0000031,8.71e-09,33;CL:0000404,8.71e-09,33 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!1.77e-26!102;UBERON:0000924!1.77e-26!102;UBERON:0006601!1.77e-26!102;UBERON:0000073!1.70e-25!75;UBERON:0001016!1.70e-25!75;UBERON:0001017!2.39e-25!73;UBERON:0005743!2.39e-25!73;UBERON:0002346!6.47e-24!71;UBERON:0003075!6.47e-24!71;UBERON:0007284!6.47e-24!71;UBERON:0001049!1.91e-23!52;UBERON:0005068!1.91e-23!52;UBERON:0006241!1.91e-23!52;UBERON:0007135!1.91e-23!52;UBERON:0000033!1.35e-22!63;UBERON:0000955!4.21e-21!50;UBERON:0006238!4.21e-21!50;UBERON:0002616!1.91e-20!49;UBERON:0003056!2.20e-17!49;UBERON:0003080!2.12e-16!40;UBERON:0002780!8.40e-16!39;UBERON:0001890!8.40e-16!39;UBERON:0006240!8.40e-16!39;UBERON:0002020!2.44e-15!34;UBERON:0000025!1.11e-13!114;UBERON:0004111!1.57e-13!122;UBERON:0002791!2.30e-12!29;UBERON:0003528!2.30e-12!29;UBERON:0001893!2.30e-12!29;UBERON:0000153!8.13e-12!94;UBERON:0007811!5.87e-11!86;UBERON:0000956!3.00e-09!21;UBERON:0001869!3.00e-09!21;UBERON:0000203!3.00e-09!21;UBERON:0000468!5.27e-09!333;UBERON:0002619!4.86e-08!17;UBERON:0003076!9.10e-08!12;UBERON:0003057!9.10e-08!12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0010314,4.50e-29,92;UBERON:0004121,3.75e-27,95;UBERON:0000924,3.75e-27,95;UBERON:0006601,3.75e-27,95;UBERON:0001016,9.05e-27,75;UBERON:0001017,1.28e-26,73;UBERON:0002346,9.87e-25,64;UBERON:0003075,9.87e-25,64;UBERON:0007284,9.87e-25,64;UBERON:0000073,1.37e-24,54;UBERON:0001049,2.42e-24,52;UBERON:0005068,2.42e-24,52;UBERON:0006241,2.42e-24,52;UBERON:0007135,2.42e-24,52;UBERON:0010371,1.02e-23,73;UBERON:0000955,2.75e-21,47;UBERON:0006238,2.75e-21,47;UBERON:0002616,1.32e-20,46;UBERON:0003056,4.95e-18,49;UBERON:0003080,5.25e-17,40;UBERON:0002780,2.20e-16,39;UBERON:0001890,2.20e-16,39;UBERON:0006240,2.20e-16,39;UBERON:0002020,6.68e-16,34;UBERON:0000025,9.88e-15,114;UBERON:0004111,4.38e-14,122;UBERON:0003528,8.33e-13,29;UBERON:0002791,8.33e-13,29;UBERON:0001893,8.33e-13,29;UBERON:0000956,1.45e-09,21;UBERON:0001869,1.45e-09,21;UBERON:0000203,1.45e-09,21;UBERON:0002619,2.64e-08,17;UBERON:0003076,5.07e-08,12;UBERON:0003057,5.07e-08,12 | |||
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| |||
|short_description=p1@Pcdhga10 | |||
}} |
Latest revision as of 05:55, 27 September 2015
Short description: | p1@Pcdhga10 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Pcdhga10_5end |
Coexpression cluster: | MCL_coexpression_mm9:108 |
Association with transcript: | -164bp_to_NM_033593, uc008eqz.1_5end |
EntrezGene: | Pcdhga10 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ectodermal cell | 5.24e-12 | 44 |
neurectodermal cell | 5.24e-12 | 44 |
neural cell | 9.57e-12 | 43 |
CNS neuron (sensu Vertebrata) | 9.07e-11 | 23 |
neuroblast (sensu Vertebrata) | 9.07e-11 | 23 |
neuron | 8.71e-09 | 33 |
neuronal stem cell | 8.71e-09 | 33 |
neuroblast | 8.71e-09 | 33 |
electrically signaling cell | 8.71e-09 | 33 |